ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah63m22 |
|---|---|
| Clone Library Name | barley_pub |
>Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)| Length = 279 Score = 32.3 bits (72), Expect = 0.28 Identities = 22/56 (39%), Positives = 25/56 (44%) Frame = -1 Query: 251 PRPSVTRSPGPKGSSAQLPTPPGIALSEPSQE*PLVDTYHFSPVREALFNTLRKYV 84 P PS T SP P S PTPP PS PL D +F P + LR Y+ Sbjct: 159 PTPSPTPSPTPTPSPTPSPTPPPSPTPPPSPS-PLGDPMYF-PSSVGTTDQLRDYI 212
>BLT4_HORVU (P25307) BLT4 protein precursor| Length = 130 Score = 32.0 bits (71), Expect = 0.37 Identities = 21/65 (32%), Positives = 28/65 (43%) Frame = -1 Query: 341 PRXGYSEGVT*ATKKGPDTSTKGATCWFTKPRPSVTRSPGPKGSSAQLPTPPGIALSEPS 162 P G GV T+ K ATC K P+ T GP+ S PPG A + P+ Sbjct: 49 PSAGCCSGVKRLAGLARSTADKQATCRCLKSVPARTTPAGPQAS------PPGAASASPT 102 Query: 161 QE*PL 147 + P+ Sbjct: 103 RSAPV 107
>CRBB1_HUMAN (P53674) Beta crystallin B1| Length = 251 Score = 31.6 bits (70), Expect = 0.48 Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Frame = -1 Query: 326 SEGVT*ATKKGPDTSTKGATCWFTKPRPSVTRSPG--PKGSSAQLPTPPG 183 S T A GPDT KGA T P P T +P P S+ PPG Sbjct: 7 SASATVAVNPGPDTKGKGAPPAGTSPSPGTTLAPTTVPITSAKAAELPPG 56
>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein| Length = 2480 Score = 31.2 bits (69), Expect = 0.63 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = -1 Query: 347 RNPRXGYSEGVT*ATKKGPDTSTKGATCWFTKPRPSVTRSPGPKGSSAQLPTPPG 183 +N R +E ++ T + + S W K +PSV S P GS+ +LP PG Sbjct: 231 KNARRSEAETLSGLTSRNKNGS------WGPKTKPSVIHSRSPPGSTPRLPERPG 279
>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2424 Score = 30.8 bits (68), Expect = 0.82 Identities = 24/56 (42%), Positives = 32/56 (57%) Frame = -2 Query: 325 PKV*PRQRKRGPILQLKERPVGSPNPDPVSHVLQVRRDPVPNYRLLPELRYRSRAR 158 P V R+R+RGP+ ++ RP +P ++H R P RLLPELR R RAR Sbjct: 2237 PGVSARRRRRGPVARV--RPARAP---ALAHARARARAPA---RLLPELRLR-RAR 2283
>ZFHX2_HUMAN (Q9C0A1) Zinc finger homeobox protein 2| Length = 1427 Score = 30.4 bits (67), Expect = 1.1 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 6/66 (9%) Frame = -1 Query: 365 RLXGIERN---PRXGYSEGVT*ATKKGPDTSTKGATCWFTKPRP---SVTRSPGPKGSSA 204 ++ G ER+ P+ G +EG KKGPDTS + F P P + R P P + Sbjct: 139 KIEGPERSQEEPKEGETEGEVGTEKKGPDTSGFISGLPFLSPPPPPLDLHRFPAPLFTPP 198 Query: 203 QLPTPP 186 LP P Sbjct: 199 VLPPFP 204
>GUN1_ACICE (P54583) Endoglucanase E1 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase E1) (Cellulase E1) (Endocellulase E1) Length = 562 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = -1 Query: 257 TKPRPSVTRSPGPKGSSAQLPTPPGIALSEPS 162 ++P PSV+ SP P S+++ PTP + P+ Sbjct: 407 SQPSPSVSPSPSPSPSASRTPTPTPTPTASPT 438
>SPRR3_MOUSE (O09116) Small proline-rich protein 3 (Cornifin beta)| Length = 238 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 6/53 (11%) Frame = -1 Query: 296 GPDTSTKGATCWFTKPRPSVTRSPGPKGSS------AQLPTPPGIALSEPSQE 156 GPD + +C P T PGP + A +P P + SEPS E Sbjct: 120 GPDRTVVPGSCSTNITEPDYTTIPGPSSTKIPDPGCAMVPGPSPSSTSEPSSE 172
>PRG4_HUMAN (Q92954) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte| stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part] Length = 1404 Score = 29.6 bits (65), Expect = 1.8 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = -1 Query: 305 TKKGPDTSTKGATCWFTKPRPSVTRSPGPKGSSAQLPTPP 186 TK+ T+TK A +P P+ T+ P P PT P Sbjct: 534 TKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTP 573 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/40 (32%), Positives = 18/40 (45%) Frame = -1 Query: 305 TKKGPDTSTKGATCWFTKPRPSVTRSPGPKGSSAQLPTPP 186 TK+ T+TK A +P P+ + P P PT P Sbjct: 417 TKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTP 456
>EBNA3_EBV (P12977) Epstein-Barr nuclear antigen 3 (EBV nuclear antigen 3)| (EBNA-3) (EBNA-3A) Length = 812 Score = 29.6 bits (65), Expect = 1.8 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = -1 Query: 254 KPRPSVTRSPGPKGS--SAQLPTPPGIALSEPSQE*PLVDTYHFSP 123 KPRP V +S S SAQ+P PP I L+ PL + + +P Sbjct: 291 KPRPEVPQSDETATSHGSAQVPEPPTIHLAAQGMAYPLHEQHGMAP 336
>LIGA_PHACH (P31837) Ligninase A precursor (EC 1.11.1.14) (Diarylpropane| peroxidase) (Lignin peroxidase) Length = 372 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -1 Query: 251 PRPSVTRSPGPKGSSAQLPTPPG 183 P PS+ PGP S A++P PPG Sbjct: 349 PFPSLVTLPGPATSVARIPPPPG 371
>GSA_STRAW (Q82E21) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 438 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = -3 Query: 174 IGAEPGIAISGHLPLFTG*RGPL*YIKKICSQGPERLGHRNLDHLRA 34 +G P +SG+ P T G Y+ +CS GP LGH + + + A Sbjct: 38 VGGTPRFMVSGNGPYLTDADGRT-YVDLVCSWGPMILGHSHPEVIAA 83
>IUTA_ECOLI (P14542) Ferric aerobactin receptor precursor (Cloacin receptor)| Length = 732 Score = 29.6 bits (65), Expect = 1.8 Identities = 25/79 (31%), Positives = 38/79 (48%) Frame = -3 Query: 366 KIGGNRAKSPXGVFRRCNLGNEKGARYFN*RSDLLVHQTPTQCHTFSRSEGIQCPTTDSS 187 +IG +A S +R L R+F + LL+H T Q + S+G++ P D Sbjct: 452 QIGAGKATSADAFWRLSRL------RHFLFNAGLLMHITEPQQAWLNFSQGLELP--DPG 503 Query: 186 RNCVIGAEPGIAISGHLPL 130 + G G A++GHLPL Sbjct: 504 KYYGRGIY-GAAVNGHLPL 521
>FABF_SHIFL (P0AAI8) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)| (3-oxoacyl-[acyl-carrier-protein] synthase II) (Beta-ketoacyl-ACP synthase II) (KAS II) Length = 412 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -3 Query: 150 ISGHLPLFTG*RGPL*YIKKICSQGPERLGH 58 ++GHL + G RGP I C+ G +GH Sbjct: 142 VAGHLTIMYGLRGPSISIATACTSGVHNIGH 172
>FABF_ECOLI (P0AAI5) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)| (3-oxoacyl-[acyl-carrier-protein] synthase II) (Beta-ketoacyl-ACP synthase II) (KAS II) Length = 412 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -3 Query: 150 ISGHLPLFTG*RGPL*YIKKICSQGPERLGH 58 ++GHL + G RGP I C+ G +GH Sbjct: 142 VAGHLTIMYGLRGPSISIATACTSGVHNIGH 172
>FABF_ECOL6 (P0AAI6) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)| (3-oxoacyl-[acyl-carrier-protein] synthase II) (Beta-ketoacyl-ACP synthase II) (KAS II) Length = 412 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -3 Query: 150 ISGHLPLFTG*RGPL*YIKKICSQGPERLGH 58 ++GHL + G RGP I C+ G +GH Sbjct: 142 VAGHLTIMYGLRGPSISIATACTSGVHNIGH 172
>FABF_ECO57 (P0AAI7) 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.41)| (3-oxoacyl-[acyl-carrier-protein] synthase II) (Beta-ketoacyl-ACP synthase II) (KAS II) Length = 412 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -3 Query: 150 ISGHLPLFTG*RGPL*YIKKICSQGPERLGH 58 ++GHL + G RGP I C+ G +GH Sbjct: 142 VAGHLTIMYGLRGPSISIATACTSGVHNIGH 172
>LIGB_PHACH (P31838) Ligninase B precursor (EC 1.11.1.14) (Diarylpropane| peroxidase) (Lignin peroxidase) Length = 372 Score = 29.3 bits (64), Expect = 2.4 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -1 Query: 251 PRPSVTRSPGPKGSSAQLPTPPG 183 P P++T PGP+ S ++P PPG Sbjct: 349 PFPTLTTLPGPETSVQRIPPPPG 371
>LIG8_PHACH (P06181) Ligninase H8 precursor (EC 1.11.1.14) (Diarylpropane| peroxidase) (Lignin peroxidase) Length = 372 Score = 29.3 bits (64), Expect = 2.4 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -1 Query: 251 PRPSVTRSPGPKGSSAQLPTPPG 183 P P++T PGP+ S ++P PPG Sbjct: 349 PFPTLTTLPGPETSVQRIPPPPG 371
>LIG3_PHACH (P21764) Ligninase LG3 precursor (EC 1.11.1.14) (Diarylpropane| peroxidase) (Lignin peroxidase) Length = 372 Score = 29.3 bits (64), Expect = 2.4 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -1 Query: 251 PRPSVTRSPGPKGSSAQLPTPPG 183 P P++T PGP+ S ++P PPG Sbjct: 349 PFPTLTTLPGPETSVQRIPPPPG 371
>G6PE_HUMAN (O95479) GDH/6PGL endoplasmic bifunctional protein precursor| [Includes: Glucose 1-dehydrogenase (EC 1.1.1.47) (Hexose-6-phosphate dehydrogenase); 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL)] Length = 791 Score = 29.3 bits (64), Expect = 2.4 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = -1 Query: 227 PGPKGSSAQLPTPPGIALSEPSQE*PLVDTYHFSPVREA-LFNTLRKYVHRGQKDSVIGT 51 P S ++ PPG+ L PL D Y +SPVRE + L ++ G+K+ I T Sbjct: 421 PSLPSSWKEMEGPPGLRLFGS----PLSDYYAYSPVRERDAHSVLLSHIFHGRKNFFITT 476
>PTPA2_NEUCR (Q7SEF9) Serine/threonine-protein phosphatase 2A activator 2 (EC| 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-2) (PPIase PTPA-2) (Rotamase PTPA-2) (Phosphotyrosyl phosphatase activator 2) Length = 449 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 4/42 (9%) Frame = -2 Query: 328 IPKV*PRQRKRGPI--LQLKERPVGSPNPDPVSHVLQ--VRR 215 IPK+ PR+RK+ P + E P P PDP + V Q VRR Sbjct: 40 IPKLEPRRRKQEPSNPTPVPETPALPPRPDPSTLVFQTPVRR 81
>NODAL_HUMAN (Q96S42) Nodal homolog precursor| Length = 347 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Frame = -2 Query: 271 RPVGSPN-PDPVSHVLQVRRDPVPNYRLLPELRYRSRARNSH*WT 140 R G P+ P P++++L + RDP+P ++ L+ A + WT Sbjct: 30 RTRGQPSSPSPLAYMLSLYRDPLPRADIIRSLQAEDVAVDGQNWT 74
>NFL_XENLA (P35616) Neurofilament triplet L protein (Neurofilament light| polypeptide) (NF-L) Length = 543 Score = 28.9 bits (63), Expect = 3.1 Identities = 20/42 (47%), Positives = 22/42 (52%) Frame = +3 Query: 255 GEPTGRSFS*SIGPLFRCLGYTFGIPXTGISLYSXQSSLYAT 380 GE T SFS +G + GYT P G S YS QSS Y T Sbjct: 388 GEETRLSFS-GVGAITS--GYTQSAPVFGRSAYSLQSSSYMT 426
>LIG5_PHACH (P11543) Ligninase LG5 precursor (EC 1.11.1.14) (Diarylpropane| peroxidase) (Lignin peroxidase) Length = 371 Score = 28.9 bits (63), Expect = 3.1 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -1 Query: 251 PRPSVTRSPGPKGSSAQLPTPPG 183 P P+++ PGP S A++P PPG Sbjct: 348 PFPTLSTLPGPATSVARIPPPPG 370
>EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)| Length = 283 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = -1 Query: 344 NPRXGYSEGVT*ATKKGPDTSTKGATCWFTKPRPSVTRSPGPKGSSAQLPTPP 186 +P+ ++ T T K P T + P+P VT+ P PK PTPP Sbjct: 120 SPKPPATKPPTYPTPKPPATKPPTPPVYTPSPKPPVTKPPTPK------PTPP 166
>RNC_XANOR (Q5H1R2) Ribonuclease III (EC 3.1.26.3) (RNase III)| Length = 226 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 3/32 (9%) Frame = -2 Query: 268 PVGSPNPDPVSHV---LQVRRDPVPNYRLLPE 182 PVG DP + + LQ R+ P+PNY L+ E Sbjct: 147 PVGKAEKDPKTRLQEWLQARQLPLPNYALISE 178
>RECG_SYNY3 (Q55681) ATP-dependent DNA helicase recG (EC 3.6.1.-)| Length = 831 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/63 (25%), Positives = 28/63 (44%) Frame = -1 Query: 248 RPSVTRSPGPKGSSAQLPTPPGIALSEPSQE*PLVDTYHFSPVREALFNTLRKYVHRGQK 69 RP V+ PK +L TP +S+ + L+ + V + LF R Y+ Q+ Sbjct: 118 RPQVSEPRYPKSGQIELHTPLATVVSQSQHQTKLLKNLGLATVEDLLFYFPRDYLDYAQQ 177 Query: 68 DSV 60 ++ Sbjct: 178 VTI 180
>AFF2_MOUSE (O55112) AF4/FMR2 family member 2 (Fragile X mental retardation| protein 2 homolog) (Protein FMR-2) (FMR2P) (Ox19 protein) Length = 1272 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = -1 Query: 260 FTKPRPSVTRSPGPKGSSAQLPTPP 186 FT P+P++T S + S +LP PP Sbjct: 608 FTWPKPNITNSTPKEKGSVELPDPP 632
>DKK3_HUMAN (Q9UBP4) Dickkopf-related protein 3 precursor (Dkk-3) (Dickkopf-3)| (hDkk-3) Length = 350 Score = 28.5 bits (62), Expect = 4.1 Identities = 20/62 (32%), Positives = 28/62 (45%) Frame = -1 Query: 275 GATCWFTKPRPSVTRSPGPKGSSAQLPTPPGIALSEPSQE*PLVDTYHFSPVREALFNTL 96 GAT +V +P P ++ P PG ALS P +E L + F V E + +T Sbjct: 5 GATLLCLLLAAAVPTAPAPAPTATSAPVKPGPALSYPQEEATLNEM--FREVEELMEDTQ 62 Query: 95 RK 90 K Sbjct: 63 HK 64
>CR9AA_BACTG (Q99031) Pesticidal crystal protein cry9Aa precursor (Insecticidal| delta-endotoxin CryIXA(a)) (Crystaline entomocidal protoxin) (130 kDa crystal protein) Length = 1156 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +1 Query: 94 LNVLKRASLTGEKW*VSTNGYSWLGSDNAIPGGVGSWALD 213 + + R+SL GE W N ++ +NAIP SW L+ Sbjct: 308 IGFVHRSSLRGESWFSFVNRANFSDLENAIPNPRPSWFLN 347
>OLFL3_MOUSE (Q8BK62) Olfactomedin-like protein 3 precursor| Length = 406 Score = 28.1 bits (61), Expect = 5.3 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = +1 Query: 187 GGVGSWALDPFGPGERVTLGRGLVN 261 G VG W DP GP E++ + G N Sbjct: 153 GSVGLWTKDPLGPAEKIYVLDGTQN 177
>NODE_RHILT (P04684) Nodulation protein E (Host-specificity of nodulation| protein B) (EC 2.3.1.-) Length = 401 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = -3 Query: 153 AISGHLPLFTG*RGPL*YIKKICSQGPERLGHRNLDHLRAGK 28 A +GH+ +F G RGP+ + C+ G + +D +R G+ Sbjct: 140 AAAGHVSIFLGLRGPVFGVTSACAAGNHAIASA-VDQIRLGR 180
>LIG4_PHACH (P11542) Ligninase H2 precursor (EC 1.11.1.14) (Diarylpropane| peroxidase) (Lignin peroxidase) (LG4) Length = 372 Score = 28.1 bits (61), Expect = 5.3 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = -1 Query: 251 PRPSVTRSPGPKGSSAQLPTPP 186 P P++ +PGP S A++P PP Sbjct: 348 PFPTLITAPGPSASVARIPPPP 369
>PPNK_SYMTH (Q67NC1) Probable inorganic polyphosphate/ATP-NAD kinase (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase) Length = 283 Score = 28.1 bits (61), Expect = 5.3 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 14/70 (20%) Frame = -3 Query: 315 NLGNEKGARYFN*RSDLLVHQTPTQCHTFSRSEGIQ--------------CPTTDSSRNC 178 ++G ARY R+D ++ TPT +S S G CP T S+R+ Sbjct: 160 SVGETVVARY---RADGVIVATPTGSTAYSLSAGGPVVEPTVDCLLVTPICPHTMSARSI 216 Query: 177 VIGAEPGIAI 148 V+GA+ +AI Sbjct: 217 VVGADVALAI 226
>FAT2_DROME (Q9VW71) Putative fat-like cadherin-related tumor suppressor homolog| precursor Length = 4705 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = -1 Query: 137 YHFSPVREALFNTLRKYVHRGQKDSVIGT*TTYALVNENH 18 Y S +A NTL VH KD + Y+L+ ENH Sbjct: 3190 YRVSVPEDAQLNTLITKVHAMDKDFGVNRQIKYSLMGENH 3229
>PPNK_NITEU (Q82UK6) Probable inorganic polyphosphate/ATP-NAD kinase (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase) Length = 296 Score = 28.1 bits (61), Expect = 5.3 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 14/67 (20%) Frame = -3 Query: 297 GARYFN*RSDLLVHQTPTQCHTFSRSEGIQ--------------CPTTDSSRNCVIGAEP 160 G ++ RSD L+ TPT ++ S G CP T S+R VIGA+ Sbjct: 169 GEYVYSLRSDGLIIATPTGSTAYALSSGGPILHPGLNLMTLVPICPHTLSNRPIVIGADA 228 Query: 159 GIAISGH 139 I I H Sbjct: 229 TIEIKVH 235
>PPCK_TREPA (O83159) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) (PEP| carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) Length = 618 Score = 28.1 bits (61), Expect = 5.3 Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 12/92 (13%) Frame = -1 Query: 263 WFTKPRPSVTRSPGPKGSSAQLPTP---------PGIALSEPSQE*PLVDTYHFS---PV 120 W RP+ TR PKG P P IA + E +D + F P Sbjct: 362 WHGVSRPAPTRDKSPKGEEIAHPNARFTAPARQCPAIASNWEDPEGVPIDAFLFGGRRPS 421 Query: 119 REALFNTLRKYVHRGQKDSVIGT*TTYALVNE 24 L + R + H S+IG+ T A++++ Sbjct: 422 TVPLVHQARDWNHGVFLGSIIGSEVTAAVISD 453
>LRTM3_MOUSE (Q8BZ81) Leucine-rich repeat transmembrane neuronal protein 3| precursor Length = 582 Score = 27.7 bits (60), Expect = 6.9 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = -1 Query: 296 GPDTSTKGATCWFTKPRPSVT-RSPGPKGSSAQLPTPPGIALSEPSQE*PLVDTYHFS 126 G T+T+ P+P+ + P PK S P PP + +EPS E VDT H S Sbjct: 362 GKSTTTERFDLARALPKPTFKPKLPRPKHESKP-PLPPTVGATEPSPE-TDVDTEHIS 417
>ITSN1_RAT (Q9WVE9) Intersectin-1 (EH domain and SH3 domain regulator of| endocytosis 1) Length = 1217 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 16/55 (29%) Frame = -1 Query: 278 KGATCWF----------------TKPRPSVTRSPGPKGSSAQLPTPPGIALSEPS 162 KG T WF KP +T +P PK + + P P + SEPS Sbjct: 787 KGKTGWFPANYAEKIPENEIPTPAKPVTDLTSAPAPKLALRETPAPLPVTSSEPS 841
>CYB_NEUCR (P00162) Cytochrome b| Length = 385 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = +3 Query: 6 IRYEVVFVYQRVGGLSSYDRVFLAPVNIF 92 + Y++V + +G L +YDR+ AP +F Sbjct: 200 VLYDIVGLSNPLGALGNYDRIIFAPYYLF 228
>ITSN1_MOUSE (Q9Z0R4) Intersectin-1 (EH and SH3 domains protein 1)| Length = 1714 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 16/55 (29%) Frame = -1 Query: 278 KGATCWF----------------TKPRPSVTRSPGPKGSSAQLPTPPGIALSEPS 162 KG T WF KP +T +P PK + + P P + SEPS Sbjct: 783 KGKTGWFPANYAEKIPENEVPTPAKPVTDLTSAPAPKLALRETPAPLPVTSSEPS 837
>COHA1_HUMAN (Q9UMD9) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen| 2) (180 kDa bullous pemphigoid antigen 2) Length = 1497 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%) Frame = -1 Query: 251 PRPSVTRSPGPKGSSAQ-LPTPPG 183 P PS+ PGP+G + LP PPG Sbjct: 868 PGPSIPGPPGPRGPPGEGLPGPPG 891
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/47 (31%), Positives = 18/47 (38%) Frame = -1 Query: 305 TKKGPDTSTKGATCWFTKPRPSVTRSPGPKGSSAQLPTPPGIALSEP 165 T + P + G W P P R+PGP G P PP P Sbjct: 284 TPRPPPPPSSGM--WPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 328
>MUCDL_RAT (Q9JIK1) Mucin and cadherin-like protein precursor| (Mu-protocadherin) (GP100) Length = 862 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/62 (30%), Positives = 30/62 (48%) Frame = -1 Query: 347 RNPRXGYSEGVT*ATKKGPDTSTKGATCWFTKPRPSVTRSPGPKGSSAQLPTPPGIALSE 168 + P+ G S+ + G TS++ AT P S T++P P S +PTP S+ Sbjct: 577 QTPKPGTSQPMV--PTPGASTSSQPAT-----PSGSSTQTPRPGTSQPMVPTPGASTSSQ 629 Query: 167 PS 162 P+ Sbjct: 630 PA 631 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/62 (30%), Positives = 30/62 (48%) Frame = -1 Query: 347 RNPRXGYSEGVT*ATKKGPDTSTKGATCWFTKPRPSVTRSPGPKGSSAQLPTPPGIALSE 168 + P+ G S+ + G TS++ AT P S T++P P S +PTP S+ Sbjct: 546 QTPKPGTSQPMV--PTPGASTSSQPAT-----PSGSSTQTPKPGTSQPMVPTPGASTSSQ 598 Query: 167 PS 162 P+ Sbjct: 599 PA 600
>ELG1_YEAST (Q12050) Telomere length regulation protein ELG1 (Telomere| elongation suppressor ELG1) Length = 791 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = -2 Query: 211 PVPNYRLLPELRYRSRARNSH*WTPTTFHRLERPSL 104 PV ++L E + + R +N W T+FH LE+P+L Sbjct: 247 PVTLKQVLIEPKLKLRIKN---WIETSFHTLEKPTL 279
>GSA_STRCO (Q9F2S0) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 438 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/47 (34%), Positives = 23/47 (48%) Frame = -3 Query: 174 IGAEPGIAISGHLPLFTG*RGPL*YIKKICSQGPERLGHRNLDHLRA 34 +G P +SG P T G Y+ +CS GP LGH + + + A Sbjct: 38 VGGTPRFMVSGTGPYLTDADGRE-YVDLVCSWGPMILGHAHPEVIAA 83
>Y100_MYCBO (P67756) Putative dioxygenase Mb0100 (EC 1.-.-.-)| Length = 289 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = -1 Query: 170 EPSQE*PLVDTYHFSPVREALFNTLRKYVHRGQKDSVIGT*TTYAL 33 +P + P + T H+ V + + R +HR + S GT TTY L Sbjct: 232 DPEYQSPFIHTQHYQ-VGDIILWDNRVLMHRAKHGSAAGTLTTYRL 276
>Y097_MYCTU (P67755) Putative dioxygenase Rv0097/MT0106 (EC 1.-.-.-)| Length = 289 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = -1 Query: 170 EPSQE*PLVDTYHFSPVREALFNTLRKYVHRGQKDSVIGT*TTYAL 33 +P + P + T H+ V + + R +HR + S GT TTY L Sbjct: 232 DPEYQSPFIHTQHYQ-VGDIILWDNRVLMHRAKHGSAAGTLTTYRL 276
>ENAH_HUMAN (Q8N8S7) Protein enabled homolog| Length = 591 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/46 (32%), Positives = 20/46 (43%) Frame = -1 Query: 320 GVT*ATKKGPDTSTKGATCWFTKPRPSVTRSPGPKGSSAQLPTPPG 183 G+ A++ S +G P P PGP +S LP PPG Sbjct: 290 GLQAASQPAETPSQQGIVLGPLAPPPPPPLPPGPAQASVALPPPPG 335
>US6NL_MOUSE (Q80XC3) USP6 N-terminal-like protein| Length = 819 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = -1 Query: 287 TSTKGATCWFTKPRPSVTRSPGPKGSSAQLPTPPGIALSEPS 162 T+ G PRP + S P GSS + T P A S P+ Sbjct: 637 TAHSGFVSTQISPRPQINPSRRPYGSSLSVDTSPEKAYSRPT 678
>NECP2_HUMAN (Q9NVZ3) Adaptin ear-binding coat-associated protein 2 (NECAP-2)| Length = 263 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/45 (42%), Positives = 23/45 (51%) Frame = +1 Query: 142 STNGYSWLGSDNAIPGGVGSWALDPFGPGERVTLGRGLVNQQVAP 276 ST G S L PGG S + P PGE++ +G LV VAP Sbjct: 181 STGGLSLLPPP---PGGKTSTLIPP--PGEQLAVGGSLVQPAVAP 220
>FGD1_HUMAN (P98174) FYVE, RhoGEF and PH domain-containing protein 1| (Faciogenital dysplasia 1 protein) (Zinc finger FYVE domain-containing protein 3) (Rho/Rac guanine nucleotide exchange factor FGD1) (Rho/Rac GEF) Length = 961 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = -2 Query: 301 KRGPILQLKERPVGSPNPDPVSHVLQVRRDPVPNYRLLPE 182 +R P++ +RPV P+P P V+ + P LPE Sbjct: 219 EREPVIVASDRPVPGPSPGPPEPVMLPQPTSQPPVPQLPE 258
>CAC1I_RAT (Q9Z0Y8) Voltage-dependent T-type calcium channel alpha-1I subunit| (Voltage-gated calcium channel alpha subunit Cav3.3) (CaVT.3) Length = 2201 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -1 Query: 251 PRPSVTRSPGPKGSSAQLPTPPGIALSEP 165 P P +T PGP+ P+PPG L EP Sbjct: 16 PEPGITEQPGPRSPP---PSPPG--LEEP 39
>ITSN1_HUMAN (Q15811) Intersectin-1 (SH3 domain-containing protein 1A) (SH3P17)| Length = 1721 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 16/55 (29%) Frame = -1 Query: 278 KGATCWF----------------TKPRPSVTRSPGPKGSSAQLPTPPGIALSEPS 162 KG T WF KP T +P PK + + P P + SEPS Sbjct: 790 KGKTGWFPANYAEKIPENEVPAPVKPVTDSTSAPAPKLALRETPAPLAVTSSEPS 844
>C6A13_DROME (Q9V4U9) Probable cytochrome P450 6a13 (EC 1.14.-.-) (CYPVIA13)| Length = 493 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -3 Query: 231 FSRSEGIQCPTTDSSRNCVIGAEPGI 154 FSRSE Q P SSRN +I + G+ Sbjct: 458 FSRSEKTQIPLKFSSRNFLISTQEGV 483
>CBL_MOUSE (P22682) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal| transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) Length = 913 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 3/57 (5%) Frame = -1 Query: 302 KKGPDTSTKGATCWFTKPRPSV---TRSPGPKGSSAQLPTPPGIALSEPSQE*PLVD 141 K P S++ W ++P P V T +PG + +L + S PSQ P D Sbjct: 575 KLPPVPSSRPGDSWLSRPIPKVPVATPNPGDPWNGRELTNRHSLPFSLPSQMEPRAD 631
>RB15B_HUMAN (Q8NDT2) Putative RNA-binding protein 15B (RNA-binding motif| protein 15B) Length = 563 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = +1 Query: 142 STNGYSWLGSDNAIPGGVGSWALDPFGPGERVTLGRGLVN 261 S NGY+ L + A P G+G+ + PG + L R LV+ Sbjct: 460 SPNGYAVLLATQATPSGLGTEGMPTVEPGLQRRLLRNLVS 499
>HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-like protein)| Length = 3969 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -1 Query: 254 KPRPSVTRSPGPKGSSAQLPTPPGIALSEPSQE 156 KP PS P PK SS++ PP + E S+E Sbjct: 1243 KPTPSAREDPAPKKSSSE--PPPRKPVEEKSEE 1273
>COHA1_MESAU (Q9JMH4) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen| 2) (180 kDa bullous pemphigoid antigen 2) Length = 1431 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%) Frame = -1 Query: 251 PRPSVTRSPGPKGSSAQ-LPTPPGI 180 P PS+ PGP+G + +P PPG+ Sbjct: 898 PGPSIPGPPGPRGPPGEGVPGPPGL 922
>UVRC_PHOLL (Q7N5C7) UvrABC system protein C (Protein uvrC) (Excinuclease ABC| subunit C) Length = 610 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/42 (28%), Positives = 22/42 (52%) Frame = -2 Query: 277 KERPVGSPNPDPVSHVLQVRRDPVPNYRLLPELRYRSRARNS 152 +++ + P P HV+Q RD N+ + + RS+ RN+ Sbjct: 514 EDKSIALPPDSPALHVIQHIRDESHNHAITGHRQRRSKVRNT 555 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,676,627 Number of Sequences: 219361 Number of extensions: 1501219 Number of successful extensions: 4630 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 4038 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4564 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
