ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah63m22 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Y14433.1|MTTANAD2 Triticum aestivum mitochondrial nad2 gene, exon 1 and 2 and join-across CDS Length = 4293 Score = 737 bits (372), Expect = 0.0 Identities = 386/390 (98%), Gaps = 1/390 (0%) Strand = Plus / Minus Query: 1 ggtagatccggtacgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 60 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2921 ggtagatccggt-cgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 2863 Query: 61 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2862 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 2803 Query: 121 accggtgaaaagtggtaggtgtccactaatggctattcctggctcggctccgataacgca 180 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2802 accggtgaaaagtggtaggtgtccactaacggctattcctggctcggctccgataacgca 2743 Query: 181 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2742 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 2683 Query: 241 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2682 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 2623 Query: 301 ttcgttgcctaggttacaccttcggaataccccanacggggatttcgctctattcccncc 360 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct: 2622 ttcgttgcctaggttacaccttcggaataccccagacggggatttcgctctattcccccc 2563 Query: 361 aatcttcactttacgccacgccgactctcc 390 |||||||||||||||||||||||||||||| Sbjct: 2562 aatcttcactttacgccacgccgactctcc 2533
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 737 bits (372), Expect = 0.0 Identities = 386/390 (98%), Gaps = 1/390 (0%) Strand = Plus / Plus Query: 1 ggtagatccggtacgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 60 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180562 ggtagatccggt-cgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 180620 Query: 61 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180621 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 180680 Query: 121 accggtgaaaagtggtaggtgtccactaatggctattcctggctcggctccgataacgca 180 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 180681 accggtgaaaagtggtaggtgtccactaacggctattcctggctcggctccgataacgca 180740 Query: 181 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180741 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 180800 Query: 241 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180801 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 180860 Query: 301 ttcgttgcctaggttacaccttcggaataccccanacggggatttcgctctattcccncc 360 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct: 180861 ttcgttgcctaggttacaccttcggaataccccagacggggatttcgctctattcccccc 180920 Query: 361 aatcttcactttacgccacgccgactctcc 390 |||||||||||||||||||||||||||||| Sbjct: 180921 aatcttcactttacgccacgccgactctcc 180950
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 722 bits (364), Expect = 0.0 Identities = 384/390 (98%), Gaps = 1/390 (0%) Strand = Plus / Plus Query: 1 ggtagatccggtacgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 60 |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 509425 ggtagatccggt-cgaggtggttttcgtttaccagcgcgtaggtggttgaagttcctatg 509483 Query: 61 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509484 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 509543 Query: 121 accggtgaaaagtggtaggtgtccactaatggctattcctggctcggctccgataacgca 180 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 509544 accggtgaaaagtggtaggtgtccactaacggctattcctggctcggctccgataacgca 509603 Query: 181 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509604 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 509663 Query: 241 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509664 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 509723 Query: 301 ttcgttgcctaggttacaccttcggaataccccanacggggatttcgctctattcccncc 360 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct: 509724 ttcgttgcctaggttacaccttcggaataccccagacggggatttcgctctattcccccc 509783 Query: 361 aatcttcactttacgccacgccgactctcc 390 |||||||||||||||||||||||||||||| Sbjct: 509784 aatcttcactttacgccacgccgactctcc 509813
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 722 bits (364), Expect = 0.0 Identities = 384/390 (98%), Gaps = 1/390 (0%) Strand = Plus / Plus Query: 1 ggtagatccggtacgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 60 |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 68365 ggtagatccggt-cgaggtggttttcgtttaccagcgcgtaggtggttgaagttcctatg 68423 Query: 61 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68424 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 68483 Query: 121 accggtgaaaagtggtaggtgtccactaatggctattcctggctcggctccgataacgca 180 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 68484 accggtgaaaagtggtaggtgtccactaacggctattcctggctcggctccgataacgca 68543 Query: 181 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68544 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 68603 Query: 241 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68604 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 68663 Query: 301 ttcgttgcctaggttacaccttcggaataccccanacggggatttcgctctattcccncc 360 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct: 68664 ttcgttgcctaggttacaccttcggaataccccagacggggatttcgctctattcccccc 68723 Query: 361 aatcttcactttacgccacgccgactctcc 390 |||||||||||||||||||||||||||||| Sbjct: 68724 aatcttcactttacgccacgccgactctcc 68753
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 722 bits (364), Expect = 0.0 Identities = 384/390 (98%), Gaps = 1/390 (0%) Strand = Plus / Minus Query: 1 ggtagatccggtacgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 60 |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 512539 ggtagatccggt-cgaggtggttttcgtttaccagcgcgtaggtggttgaagttcctatg 512481 Query: 61 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512480 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 512421 Query: 121 accggtgaaaagtggtaggtgtccactaatggctattcctggctcggctccgataacgca 180 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 512420 accggtgaaaagtggtaggtgtccactaacggctattcctggctcggctccgataacgca 512361 Query: 181 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512360 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 512301 Query: 241 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512300 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 512241 Query: 301 ttcgttgcctaggttacaccttcggaataccccanacggggatttcgctctattcccncc 360 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct: 512240 ttcgttgcctaggttacaccttcggaataccccagacggggatttcgctctattcccccc 512181 Query: 361 aatcttcactttacgccacgccgactctcc 390 |||||||||||||||||||||||||||||| Sbjct: 512180 aatcttcactttacgccacgccgactctcc 512151
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 722 bits (364), Expect = 0.0 Identities = 384/390 (98%), Gaps = 1/390 (0%) Strand = Plus / Minus Query: 1 ggtagatccggtacgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 60 |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 92651 ggtagatccggt-cgaggtggttttcgtttaccagcgcgtaggtggttgaagttcctatg 92593 Query: 61 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92592 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 92533 Query: 121 accggtgaaaagtggtaggtgtccactaatggctattcctggctcggctccgataacgca 180 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 92532 accggtgaaaagtggtaggtgtccactaacggctattcctggctcggctccgataacgca 92473 Query: 181 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92472 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 92413 Query: 241 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92412 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 92353 Query: 301 ttcgttgcctaggttacaccttcggaataccccanacggggatttcgctctattcccncc 360 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct: 92352 ttcgttgcctaggttacaccttcggaataccccagacggggatttcgctctattcccccc 92293 Query: 361 aatcttcactttacgccacgccgactctcc 390 |||||||||||||||||||||||||||||| Sbjct: 92292 aatcttcactttacgccacgccgactctcc 92263
>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion, complete genome Length = 491515 Score = 722 bits (364), Expect = 0.0 Identities = 384/390 (98%), Gaps = 1/390 (0%) Strand = Plus / Plus Query: 1 ggtagatccggtacgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 60 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404152 ggtagatccggt-cgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 404210 Query: 61 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404211 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 404270 Query: 121 accggtgaaaagtggtaggtgtccactaatggctattcctggctcggctccgataacgca 180 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 404271 accggtgaaaagtggtaggtgtccactaacggctattcctggctcggctccgataacgca 404330 Query: 181 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404331 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 404390 Query: 241 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404391 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 404450 Query: 301 ttcgttgcctaggttacaccttcggaataccccanacggggatttcgctctattcccncc 360 |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || Sbjct: 404451 ttcgttgcctaggttacaccttcggaataccccagacggggattgagctctattcccccc 404510 Query: 361 aatcttcactttacgccacgccgactctcc 390 |||||||||||||||||||||||||||||| Sbjct: 404511 aatcttcactttacgccacgccgactctcc 404540
>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion, complete genome Length = 490673 Score = 722 bits (364), Expect = 0.0 Identities = 384/390 (98%), Gaps = 1/390 (0%) Strand = Plus / Plus Query: 1 ggtagatccggtacgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 60 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403328 ggtagatccggt-cgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 403386 Query: 61 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403387 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 403446 Query: 121 accggtgaaaagtggtaggtgtccactaatggctattcctggctcggctccgataacgca 180 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 403447 accggtgaaaagtggtaggtgtccactaacggctattcctggctcggctccgataacgca 403506 Query: 181 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403507 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 403566 Query: 241 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403567 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 403626 Query: 301 ttcgttgcctaggttacaccttcggaataccccanacggggatttcgctctattcccncc 360 |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || Sbjct: 403627 ttcgttgcctaggttacaccttcggaataccccagacggggattgagctctattcccccc 403686 Query: 361 aatcttcactttacgccacgccgactctcc 390 |||||||||||||||||||||||||||||| Sbjct: 403687 aatcttcactttacgccacgccgactctcc 403716
>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion, complete genome Length = 490669 Score = 722 bits (364), Expect = 0.0 Identities = 384/390 (98%), Gaps = 1/390 (0%) Strand = Plus / Plus Query: 1 ggtagatccggtacgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 60 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403324 ggtagatccggt-cgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 403382 Query: 61 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403383 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 403442 Query: 121 accggtgaaaagtggtaggtgtccactaatggctattcctggctcggctccgataacgca 180 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 403443 accggtgaaaagtggtaggtgtccactaacggctattcctggctcggctccgataacgca 403502 Query: 181 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403503 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 403562 Query: 241 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403563 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 403622 Query: 301 ttcgttgcctaggttacaccttcggaataccccanacggggatttcgctctattcccncc 360 |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || Sbjct: 403623 ttcgttgcctaggttacaccttcggaataccccagacggggattgagctctattcccccc 403682 Query: 361 aatcttcactttacgccacgccgactctcc 390 |||||||||||||||||||||||||||||| Sbjct: 403683 aatcttcactttacgccacgccgactctcc 403712
>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome Length = 490520 Score = 722 bits (364), Expect = 0.0 Identities = 384/390 (98%), Gaps = 1/390 (0%) Strand = Plus / Plus Query: 1 ggtagatccggtacgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 60 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403194 ggtagatccggt-cgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 403252 Query: 61 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403253 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 403312 Query: 121 accggtgaaaagtggtaggtgtccactaatggctattcctggctcggctccgataacgca 180 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 403313 accggtgaaaagtggtaggtgtccactaacggctattcctggctcggctccgataacgca 403372 Query: 181 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403373 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 403432 Query: 241 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403433 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 403492 Query: 301 ttcgttgcctaggttacaccttcggaataccccanacggggatttcgctctattcccncc 360 |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || Sbjct: 403493 ttcgttgcctaggttacaccttcggaataccccagacggggattgagctctattcccccc 403552 Query: 361 aatcttcactttacgccacgccgactctcc 390 |||||||||||||||||||||||||||||| Sbjct: 403553 aatcttcactttacgccacgccgactctcc 403582
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 720 bits (363), Expect = 0.0 Identities = 383/389 (98%), Gaps = 1/389 (0%) Strand = Plus / Minus Query: 1 ggtagatccggtacgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 60 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4641900 ggtagatccggt-cgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 4641842 Query: 61 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4641841 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 4641782 Query: 121 accggtgaaaagtggtaggtgtccactaatggctattcctggctcggctccgataacgca 180 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 4641781 accggtgaaaagtggtaggtgtccactaacggctattcctggctcggctccgataacgca 4641722 Query: 181 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4641721 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 4641662 Query: 241 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4641661 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 4641602 Query: 301 ttcgttgcctaggttacaccttcggaataccccanacggggatttcgctctattcccncc 360 |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || Sbjct: 4641601 ttcgttgcctaggttacaccttcggaataccccagacggggattgagctctattcccccc 4641542 Query: 361 aatcttcactttacgccacgccgactctc 389 ||||||||||||||||||||||||||||| Sbjct: 4641541 aatcttcactttacgccacgccgactctc 4641513
>dbj|AP006176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0681H07 Length = 144722 Score = 720 bits (363), Expect = 0.0 Identities = 383/389 (98%), Gaps = 1/389 (0%) Strand = Plus / Minus Query: 1 ggtagatccggtacgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 60 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94769 ggtagatccggt-cgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 94711 Query: 61 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94710 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 94651 Query: 121 accggtgaaaagtggtaggtgtccactaatggctattcctggctcggctccgataacgca 180 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 94650 accggtgaaaagtggtaggtgtccactaacggctattcctggctcggctccgataacgca 94591 Query: 181 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94590 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 94531 Query: 241 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94530 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 94471 Query: 301 ttcgttgcctaggttacaccttcggaataccccanacggggatttcgctctattcccncc 360 |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || Sbjct: 94470 ttcgttgcctaggttacaccttcggaataccccagacggggattgagctctattcccccc 94411 Query: 361 aatcttcactttacgccacgccgactctc 389 ||||||||||||||||||||||||||||| Sbjct: 94410 aatcttcactttacgccacgccgactctc 94382
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 690 bits (348), Expect = 0.0 Identities = 380/390 (97%), Gaps = 1/390 (0%) Strand = Plus / Plus Query: 1 ggtagatccggtacgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 60 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22342918 ggtagatccggt-cgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 22342976 Query: 61 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22342977 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 22343036 Query: 121 accggtgaaaagtggtaggtgtccactaatggctattcctggctcggctccgataacgca 180 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 22343037 accggtgaaaagtggtaggtgtccactaacggctattcctggctcggctccgataacgca 22343096 Query: 181 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 240 |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 22343097 attccgggaggagtcggtagttaggcacttgatcccttcggacctggagaacgtgtgaca 22343156 Query: 241 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 22343157 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtattgggccccttt 22343216 Query: 301 ttcgttgcctaggttacaccttcggaataccccanacggggatttcgctctattcccncc 360 |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || Sbjct: 22343217 ttcgttgcctaggttacaccttcggaataccccagacggggattgagctctattcccccc 22343276 Query: 361 aatcttcactttacgccacgccgactctcc 390 |||||||||||||||||| ||||||||||| Sbjct: 22343277 aatcttcactttacgccatgccgactctcc 22343306
>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1267B06 Length = 156989 Score = 690 bits (348), Expect = 0.0 Identities = 380/390 (97%), Gaps = 1/390 (0%) Strand = Plus / Plus Query: 1 ggtagatccggtacgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 60 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101562 ggtagatccggt-cgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatg 101620 Query: 61 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101621 accgagtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctcta 101680 Query: 121 accggtgaaaagtggtaggtgtccactaatggctattcctggctcggctccgataacgca 180 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 101681 accggtgaaaagtggtaggtgtccactaacggctattcctggctcggctccgataacgca 101740 Query: 181 attccgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgaca 240 |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 101741 attccgggaggagtcggtagttaggcacttgatcccttcggacctggagaacgtgtgaca 101800 Query: 241 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggccccttt 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 101801 ctgggtcggggtttggtgaaccaacaggtcgctcctttagttgaagtattgggccccttt 101860 Query: 301 ttcgttgcctaggttacaccttcggaataccccanacggggatttcgctctattcccncc 360 |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || Sbjct: 101861 ttcgttgcctaggttacaccttcggaataccccagacggggattgagctctattcccccc 101920 Query: 361 aatcttcactttacgccacgccgactctcc 390 |||||||||||||||||| ||||||||||| Sbjct: 101921 aatcttcactttacgccatgccgactctcc 101950
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 589 bits (297), Expect = e-165 Identities = 363/383 (94%), Gaps = 2/383 (0%) Strand = Plus / Plus Query: 5 gatccggtacgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatgaccg 64 |||||||| ||||||||||||||||||||||| |||||||| ||||| |||||||||||| Sbjct: 275825 gatccggt-cgaggtggttttcgtttaccagcacgtaggtgttctaaattcctatgaccg 275883 Query: 65 agtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctctaaccg 124 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 275884 agtctttctggcccctgtgaacatcttttcttaatgtattaaagagggcctctctaaccg 275943 Query: 125 gtgaaaagtggtaggtgtccactaatggctattcctggctcggctccgataacgcaattc 184 |||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 275944 gtgaaaagtggtgggtgtccactaacggccattcctggctcggctccgataacgcaattc 276003 Query: 185 cgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgacactgg 244 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 276004 cgggaggagtcggtagttgggcactggatcccttcggacctggagaatgtgtgacgctgg 276063 Query: 245 gtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggcccctttttcg 304 ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 276064 gtcggggtttggtgaaccaactggtcgctcctctagttgaagtatcgggcccctttttcg 276123 Query: 305 ttgcctaggttacaccttcggaataccccanacggggatttcgctctattcccnccaatc 364 |||||||||||||||||||||||||||||| | ||| |||| |||| |||| |||||| Sbjct: 276124 ttgcctaggttacaccttcggaataccccataagggaattt-tttctactccccccaatc 276182 Query: 365 ttcactttacgccacgccgactc 387 ||||||||||||||||||||||| Sbjct: 276183 ttcactttacgccacgccgactc 276205
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 547 bits (276), Expect = e-153 Identities = 360/386 (93%), Gaps = 2/386 (0%) Strand = Plus / Plus Query: 5 gatccggtacgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatgaccg 64 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79014 gatccggt-cgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatgaccg 79072 Query: 65 agtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctctaaccg 124 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 79073 agtctttctggcccctgtgaacatcttttcttaatgtattaaagagggcctctctaaccg 79132 Query: 125 gtgaaaagtggtaggtgtccactaatggctattcctggctcggctccgataacgcaattc 184 ||||||||| || |||||||||||| ||| |||| |||||||||||||||||| ||||| Sbjct: 79133 gtgaaaagtagtgggtgtccactaacggccgttcccggctcggctccgataacgaaattc 79192 Query: 185 cgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgacactgg 244 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 79193 cgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgacgctgg 79252 Query: 245 gtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggcccctttttcg 304 || |||||||||||||||||| |||||||||| |||||||||||||||||||| |||||| Sbjct: 79253 gtaggggtttggtgaaccaactggtcgctcctctagttgaagtatcgggcccc-ttttcg 79311 Query: 305 ttgcctaggttacaccttcggaataccccanacggggatttcgctctattcccnccaatc 364 |||||||||||||||||||||||||||||| | ||| |||| ||||| | || |||| Sbjct: 79312 ttgcctaggttacaccttcggaataccccagaagggaatttatctctacttccctaaatc 79371 Query: 365 ttcactttacgccacgccgactctcc 390 ||||||| | |||||||||||||||| Sbjct: 79372 ttcacttgatgccacgccgactctcc 79397
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 547 bits (276), Expect = e-153 Identities = 360/386 (93%), Gaps = 2/386 (0%) Strand = Plus / Plus Query: 5 gatccggtacgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatgaccg 64 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216952 gatccggt-cgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatgaccg 217010 Query: 65 agtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctctaaccg 124 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 217011 agtctttctggcccctgtgaacatcttttcttaatgtattaaagagggcctctctaaccg 217070 Query: 125 gtgaaaagtggtaggtgtccactaatggctattcctggctcggctccgataacgcaattc 184 ||||||||| || |||||||||||| ||| |||| |||||||||||||||||| ||||| Sbjct: 217071 gtgaaaagtagtgggtgtccactaacggccgttccaggctcggctccgataacgaaattc 217130 Query: 185 cgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgacactgg 244 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 217131 cgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgacgctgg 217190 Query: 245 gtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggcccctttttcg 304 ||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||| Sbjct: 217191 gtcggggtttggtgaaccaactggtcgctcctctagttgaagtatcgggcccc-ttttcg 217249 Query: 305 ttgcctaggttacaccttcggaataccccanacggggatttcgctctattcccnccaatc 364 |||||||||||||||||||||||||||||| | ||| |||| || || | || |||| Sbjct: 217250 ttgcctaggttacaccttcggaataccccagaagggaatttttctatacttccctaaatc 217309 Query: 365 ttcactttacgccacgccgactctcc 390 ||||||| | |||||||||||||||| Sbjct: 217310 ttcacttgatgccacgccgactctcc 217335
>dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete sequence Length = 368801 Score = 543 bits (274), Expect = e-151 Identities = 346/368 (94%), Gaps = 2/368 (0%) Strand = Plus / Minus Query: 21 gttttcgtttaccagcgcgtaggtggtctaagttcctatgaccgagtctttctggcccct 80 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 242729 gttttcgtttaccagcgcgtaggtagtctaagttcctatgaccgagtctttctggcccct 242670 Query: 81 gtgaacatattttcttaatgtattaaagagggcctctctaaccggtgaaaagtggtaggt 140 |||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 242669 gtgaacatcttttcttaatgtattaaagagggcctctctaaccggtgaaaagtagtgggt 242610 Query: 141 gtccactaatggctattcctggctcggctccgataacgcaattccgggaggagtcggtag 200 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242609 gtccactaacggctattcctggctcggctccgataacgcaattccgggaggagtcggtag 242550 Query: 201 ttgggcactggatcccttcggacctggagaacgtgtgacactgggtcggggtttggtgaa 260 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 242549 ttgggcactggatcctttcggacctggagaacgtgtgacactgggtcggagtttggtgaa 242490 Query: 261 ccaacaggtcgctcctttagttgaagtatcgggccc-ctttttcgttgcctaggttacac 319 ||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 242489 ccaactggtcgctcctctagttgaagtatcgggccctttttttcgttgcctaggttaca- 242431 Query: 320 cttcggaataccccanacggggatttcgctctattcccnccaatcttcactttacgccac 379 ||||||||||||||| | ||| |||| || || | || |||||||||||||||||||| Sbjct: 242430 cttcggaataccccagaagggaatttttctatacttccttcaatcttcactttacgccac 242371 Query: 380 gccgactc 387 |||||||| Sbjct: 242370 gccgactc 242363
>dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete sequence Length = 501020 Score = 543 bits (274), Expect = e-151 Identities = 345/368 (93%), Gaps = 1/368 (0%) Strand = Plus / Minus Query: 21 gttttcgtttaccagcgcgtaggtggtctaagttcctatgaccgagtctttctggcccct 80 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 146465 gttttcgtttaccagcgcgtaggtagtataagttcctatgaccgagtctttctggcccct 146406 Query: 81 gtgaacatattttcttaatgtattaaagagggcctctctaaccggtgaaaagtggtaggt 140 |||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 146405 gtgaacatcttttcttaatgtattaaagagggcctctctaaccggtgaaaagtagtgggt 146346 Query: 141 gtccactaatggctattcctggctcggctccgataacgcaattccgggaggagtcggtag 200 ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 146345 gtccactaacggctattcctggctcggcgccgataacgcaattccgggaggagtcggtag 146286 Query: 201 ttgggcactggatcccttcggacctggagaacgtgtgacactgggtcggggtttggtgaa 260 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 146285 ttgggcactggatcctttcggacctggagaacgtgtgacactgggtcggagtttggtgaa 146226 Query: 261 ccaacaggtcgctcctttagttgaagtatcgggccc-ctttttcgttgcctaggttacac 319 ||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 146225 ccaactggtcgctcctctagttgaagtatcgggccctttttttcgttgcctaggttacac 146166 Query: 320 cttcggaataccccanacggggatttcgctctattcccnccaatcttcactttacgccac 379 ||||||||||||||| | ||| |||| || || | || |||||||||||||||||||| Sbjct: 146165 cttcggaataccccagaagggaatttttctatacttccttcaatcttcactttacgccac 146106 Query: 380 gccgactc 387 |||||||| Sbjct: 146105 gccgactc 146098
>gb|AC006225.3| Arabidopsis thaliana chromosome 2 BAC T5E7 genomic sequence, complete sequence Length = 88249 Score = 539 bits (272), Expect = e-150 Identities = 359/386 (93%), Gaps = 2/386 (0%) Strand = Plus / Minus Query: 5 gatccggtacgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatgaccg 64 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53687 gatccggt-cgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatgaccg 53629 Query: 65 agtctttctggcccctgtgaacatattttcttaatgtattaaagagggcctctctaaccg 124 |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 53628 agtctttctggcccctgtgaacatcttttcttaatgtattaaagaggacctctctaaccg 53569 Query: 125 gtgaaaagtggtaggtgtccactaatggctattcctggctcggctccgataacgcaattc 184 ||||||||| || |||||||||||| ||| |||| |||||||||||||||||| ||||| Sbjct: 53568 gtgaaaagtagtgggtgtccactaacggccgttcccggctcggctccgataacgaaattc 53509 Query: 185 cgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgacactgg 244 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 53508 cgggaggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgacgctgg 53449 Query: 245 gtcggggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggcccctttttcg 304 || |||||||||||||||||| |||||||||| |||||||||||||||||||| |||||| Sbjct: 53448 gtaggggtttggtgaaccaactggtcgctcctctagttgaagtatcgggcccc-ttttcg 53390 Query: 305 ttgcctaggttacaccttcggaataccccanacggggatttcgctctattcccnccaatc 364 |||||||||||||||||||||||||||||| | ||| |||| ||||| | || |||| Sbjct: 53389 ttgcctaggttacaccttcggaataccccagaagggaatttatctctacttccctaaatc 53330 Query: 365 ttcactttacgccacgccgactctcc 390 ||||||| | |||||||||||||||| Sbjct: 53329 ttcacttgatgccacgccgactctcc 53304
>gb|M81725.1|OBENAD201 Oenothera berteriana NADH dehydrogenase subunit 2 (nad2) gene, exons 1-2 Length = 3162 Score = 533 bits (269), Expect = e-148 Identities = 351/378 (92%), Gaps = 7/378 (1%) Strand = Plus / Minus Query: 14 cgaggtggttttcgtttaccagcgcgtaggtggtctaagttcctatgaccgagtctttct 73 ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2785 cgaggtggttttcctttaccagcgcgtaggtgatctaagttcctatgaccgagtctttct 2726 Query: 74 ggcccctgtgaacatattt----tcttaatgtattaaagagggcctctctaaccggtgaa 129 ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2725 ggcccctgtgaacatctttcttttcttaatgtattaaagagggcctctctaaccggtgaa 2666 Query: 130 aagtggtaggtgtccactaatggctattcctggctcggctccgataacgcaattccggga 189 ||||||| |||||||||||| ||| |||||||||||||||||||||| |||||||||||| Sbjct: 2665 aagtggtcggtgtccactaacggccattcctggctcggctccgataatgcaattccggga 2606 Query: 190 ggagtcggtagttgggcactggatcccttcggacctggagaacgtgtgacactgggtcgg 249 | ||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||| Sbjct: 2605 g---tcggtagttgggcactggatccctttggacctggagaaggtgtgacgctgggtcgg 2549 Query: 250 ggtttggtgaaccaacaggtcgctcctttagttgaagtatcgggcccctttttcgttgcc 309 |||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 2548 ggtttggtgaaccaactggtcgctcctctagtggaagtatcgggcccctttttcgttgcc 2489 Query: 310 taggttacaccttcggaataccccanacggggatttcgctctattcccnccaatcttcac 369 ||||||||||||||||||||||||| | ||| |||| |||||||| || |||||||||| Sbjct: 2488 taggttacaccttcggaataccccagaagggaatttggctctatttccctcaatcttcac 2429 Query: 370 tttacgccacgccgactc 387 |||||||||||||||||| Sbjct: 2428 tttacgccacgccgactc 2411
>emb|X96535.1|ATRPSNAD A.thaliana mitochondrial rps4 gene & nad2 gene, exon 1 & 2 and joining features Length = 4784 Score = 220 bits (111), Expect = 3e-54 Identities = 164/181 (90%), Gaps = 1/181 (0%) Strand = Plus / Minus Query: 210 ggatcccttcggacctggagaacgtgtgacactgggtcggggtttggtgaaccaacaggt 269 |||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||| Sbjct: 4784 ggatcccttcggacctggagaacgtgtgacgctgggtaggggtttggtgaaccaactggt 4725 Query: 270 cgctcctttagttgaagtatcgggcccctttttcgttgcctaggttacaccttcggaata 329 ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 4724 cgctcctctagttgaagtatcgggcccc-ttttcgttgcctaggttacaccttcggaata 4666 Query: 330 ccccanacggggatttcgctctattcccnccaatcttcactttacgccacgccgactctc 389 ||||| | ||| |||| ||||| | || ||||||||||| | ||||||||||||||| Sbjct: 4665 ccccagaagggaatttatctctacttccctaaatcttcacttgatgccacgccgactctc 4606 Query: 390 c 390 | Sbjct: 4605 c 4605
>emb|X15107.1|PHPPMYIV P.hybrida mitochondrial DNA region pPMYIV Length = 1359 Score = 178 bits (90), Expect = 9e-42 Identities = 99/102 (97%) Strand = Plus / Plus Query: 114 ctctctaaccggtgaaaagtggtaggtgtccactaatggctattcctggctcggctccga 173 ||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||| Sbjct: 1258 ctctctaaccggtgaaaagtggtgggtgtccactaacggccattcctggctcggctccga 1317 Query: 174 taacgcaattccgggaggagtcggtagttgggcactggatcc 215 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1318 taacgcaattccgggaggagtcggtagttgggcactggatcc 1359
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 157 bits (79), Expect = 3e-35 Identities = 82/83 (98%) Strand = Plus / Plus Query: 167 gctccgataacgcaattccgggaggagtcggtagttgggcactggatcccttcggacctg 226 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13391668 gctccgataacacaattccgggaggagtcggtagttgggcactggatcccttcggacctg 13391727 Query: 227 gagaacgtgtgacactgggtcgg 249 ||||||||||||||||||||||| Sbjct: 13391728 gagaacgtgtgacactgggtcgg 13391750
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 157 bits (79), Expect = 3e-35 Identities = 82/83 (98%) Strand = Plus / Plus Query: 167 gctccgataacgcaattccgggaggagtcggtagttgggcactggatcccttcggacctg 226 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13345942 gctccgataacacaattccgggaggagtcggtagttgggcactggatcccttcggacctg 13346001 Query: 227 gagaacgtgtgacactgggtcgg 249 ||||||||||||||||||||||| Sbjct: 13346002 gagaacgtgtgacactgggtcgg 13346024
>emb|AL831802.5|CNS08CAF Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0083D13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104259 Score = 157 bits (79), Expect = 3e-35 Identities = 82/83 (98%) Strand = Plus / Minus Query: 167 gctccgataacgcaattccgggaggagtcggtagttgggcactggatcccttcggacctg 226 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 41312 gctccgataacacaattccgggaggagtcggtagttgggcactggatcccttcggacctg 41253 Query: 227 gagaacgtgtgacactgggtcgg 249 ||||||||||||||||||||||| Sbjct: 41252 gagaacgtgtgacactgggtcgg 41230
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 93.7 bits (47), Expect = 4e-16 Identities = 50/51 (98%) Strand = Plus / Minus Query: 16 aggtggttttcgtttaccagcgcgtaggtggtctaagttcctatgaccgag 66 ||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 22216713 aggtggttttcgtttaccagcacgtaggtggtctaagttcctatgaccgag 22216663
>dbj|AP005658.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0620D11 Length = 140245 Score = 93.7 bits (47), Expect = 4e-16 Identities = 50/51 (98%) Strand = Plus / Minus Query: 16 aggtggttttcgtttaccagcgcgtaggtggtctaagttcctatgaccgag 66 ||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 134012 aggtggttttcgtttaccagcacgtaggtggtctaagttcctatgaccgag 133962
>emb|Y07911.1|MDNAD2 M.drummondii mitochondrial nad2 gene Length = 1606 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/56 (89%), Gaps = 2/56 (3%) Strand = Plus / Minus Query: 241 ctgggtcggggtttggtgaaccaac--aggtcgctcctttagttgaagtatcgggc 294 |||||| ||||||| |||||||||| ||||||||||| |||||||||||| |||| Sbjct: 448 ctgggttggggtttagtgaaccaaccaaggtcgctcctctagttgaagtattgggc 393 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Minus Query: 97 aatgtattaaagagggcctctctaaccggt 126 ||||| |||||||||||||||| ||||||| Sbjct: 597 aatgtcttaaagagggcctctccaaccggt 568
>emb|Y07910.1|ANNAD2 A.nidus mitochondrial nad2 gene Length = 2609 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/56 (89%), Gaps = 2/56 (3%) Strand = Plus / Minus Query: 241 ctgggtcggggtttggtgaaccaac--aggtcgctcctttagttgaagtatcgggc 294 |||||| ||||||| |||||||||| ||||||||||| |||||||||||| |||| Sbjct: 452 ctgggttggggtttagtgaaccaactaaggtcgctcctctagttgaagtattgggc 397 Score = 50.1 bits (25), Expect = 0.005 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand = Plus / Minus Query: 50 aagttcctatgaccgagtctttctggcccctgtgaacatattttcttaatgtattaaaga 109 ||||||||| || ||||| || || |||||||||||||| || | ||||| ||||||| Sbjct: 647 aagttcctacgatcgagtgttcctagcccctgtgaacat-ttcagtgaatgtcttaaaga 589 Query: 110 gggcctctctaaccggt 126 ||||||||| ||||||| Sbjct: 588 gggcctctccaaccggt 572
>gb|AC137986.27| Medicago truncatula clone mth2-7g6, complete sequence Length = 128361 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 133 tggtaggtgtccactaatggctattcctggctcggct 169 |||||||||| |||||| || ||||||||||||||| Sbjct: 109370 tggtaggtgtgcactaacagccattcctggctcggct 109406
>gb|AC101902.9| Mus musculus chromosome 1, clone RP24-147M23, complete sequence Length = 223784 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ttttcttaatgtattaaaga 109 |||||||||||||||||||| Sbjct: 5928 ttttcttaatgtattaaaga 5947
>emb|AL356454.15| Human DNA sequence from clone RP11-458J24 on chromosome 6, complete sequence Length = 174333 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cctgtgaacatattttctta 97 |||||||||||||||||||| Sbjct: 47138 cctgtgaacatattttctta 47119
>emb|CR381700.6| Zebrafish DNA sequence from clone CH211-198F4 in linkage group 14, complete sequence Length = 203630 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 atattttcttaatgtattaa 106 |||||||||||||||||||| Sbjct: 64588 atattttcttaatgtattaa 64569
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 ctctctaaccggtgaaaagt 133 |||||||||||||||||||| Sbjct: 17094728 ctctctaaccggtgaaaagt 17094747
>emb|AL928661.10| Mouse DNA sequence from clone RP23-3E2 on chromosome 4, complete sequence Length = 221208 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 atattttcttaatgtattaa 106 |||||||||||||||||||| Sbjct: 91933 atattttcttaatgtattaa 91914
>emb|AL662956.3|OSJN00159 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018J19, complete sequence Length = 169559 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 ctctctaaccggtgaaaagt 133 |||||||||||||||||||| Sbjct: 39025 ctctctaaccggtgaaaagt 39044
>emb|AL606990.3|OSJN00122 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0066J23, complete sequence Length = 156934 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 ctctctaaccggtgaaaagt 133 |||||||||||||||||||| Sbjct: 149984 ctctctaaccggtgaaaagt 150003
>gb|AC132258.3| Mus musculus BAC clone RP24-361F13 from 1, complete sequence Length = 130493 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ttttcttaatgtattaaaga 109 |||||||||||||||||||| Sbjct: 94089 ttttcttaatgtattaaaga 94108 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,129,119 Number of Sequences: 3902068 Number of extensions: 2129119 Number of successful extensions: 38778 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 39 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 38610 Number of HSP's gapped (non-prelim): 153 length of query: 392 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 370 effective length of database: 17,147,199,772 effective search space: 6344463915640 effective search space used: 6344463915640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
