Clone Name | rbah63m21 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | GLTP_PIG (P68266) Glycolipid transfer protein (GLTP) | 48 | 2e-05 | 2 | GLTP_HUMAN (Q9NZD2) Glycolipid transfer protein (GLTP) | 48 | 2e-05 | 3 | GLTP_BOVIN (P68265) Glycolipid transfer protein (GLTP) | 48 | 2e-05 | 4 | GLTP_MOUSE (Q9JL62) Glycolipid transfer protein (GLTP) | 47 | 2e-05 | 5 | YB33_SCHPO (O14338) Serine-rich protein C2F12.03c in chromosome II | 29 | 6.9 | 6 | YKGD_ECOLI (P77379) Putative HTH-type transcriptional regulator ... | 29 | 9.0 | 7 | SYT_PYRHO (O58430) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threon... | 29 | 9.0 |
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>GLTP_PIG (P68266) Glycolipid transfer protein (GLTP)| Length = 208 Score = 47.8 bits (112), Expect = 2e-05 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Frame = -3 Query: 503 TNGLLWLTRAMDFLVELFRNLLD------HPDWTMSQACTDSYTKTLKKWHGWLASSSFT 342 T L+WL R + F+ +++ D HP+ A T +Y LKK+HGW+ F Sbjct: 90 TLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNA-TKAYEMALKKYHGWIVQKIFQ 148 Query: 341 VAMKLAPNKDKFMEVIS 291 A+ AP K F++ +S Sbjct: 149 AALYAAPYKSDFLKALS 165
>GLTP_HUMAN (Q9NZD2) Glycolipid transfer protein (GLTP)| Length = 208 Score = 47.8 bits (112), Expect = 2e-05 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Frame = -3 Query: 503 TNGLLWLTRAMDFLVELFRNLLD------HPDWTMSQACTDSYTKTLKKWHGWLASSSFT 342 T L+WL R + F+ +++ D HP+ A T +Y LKK+HGW+ F Sbjct: 90 TLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNA-TKAYEMALKKYHGWIVQKIFQ 148 Query: 341 VAMKLAPNKDKFMEVIS 291 A+ AP K F++ +S Sbjct: 149 AALYAAPYKSDFLKALS 165
>GLTP_BOVIN (P68265) Glycolipid transfer protein (GLTP)| Length = 208 Score = 47.8 bits (112), Expect = 2e-05 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Frame = -3 Query: 503 TNGLLWLTRAMDFLVELFRNLLD------HPDWTMSQACTDSYTKTLKKWHGWLASSSFT 342 T L+WL R + F+ +++ D HP+ A T +Y LKK+HGW+ F Sbjct: 90 TLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNA-TKAYEMALKKYHGWIVQKIFQ 148 Query: 341 VAMKLAPNKDKFMEVIS 291 A+ AP K F++ +S Sbjct: 149 AALYAAPYKSDFLKALS 165
>GLTP_MOUSE (Q9JL62) Glycolipid transfer protein (GLTP)| Length = 208 Score = 47.4 bits (111), Expect = 2e-05 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 6/77 (7%) Frame = -3 Query: 503 TNGLLWLTRAMDFLVELFRNLLD------HPDWTMSQACTDSYTKTLKKWHGWLASSSFT 342 T LLWL R + F+ +++ D HP+ A +Y LKK+HGWL F Sbjct: 90 TLALLWLKRGLRFIQVFLQSICDGERDENHPNLIRVNA-NKAYEMALKKYHGWLVQKIFK 148 Query: 341 VAMKLAPNKDKFMEVIS 291 A+ AP K F++ +S Sbjct: 149 AALYAAPYKSDFLKALS 165
>YB33_SCHPO (O14338) Serine-rich protein C2F12.03c in chromosome II| Length = 891 Score = 29.3 bits (64), Expect = 6.9 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 369 MPFLQSFCV*ISTCLTHSPVWMVKQI 446 MP L CV S+CL + VW+ K I Sbjct: 574 MPMLLPLCVLTSSCLQNGDVWLTKDI 599
>YKGD_ECOLI (P77379) Putative HTH-type transcriptional regulator ykgD| Length = 284 Score = 28.9 bits (63), Expect = 9.0 Identities = 14/56 (25%), Positives = 27/56 (48%) Frame = -3 Query: 488 WLTRAMDFLVELFRNLLDHPDWTMSQACTDSYTKTLKKWHGWLASSSFTVAMKLAP 321 WL A+ FL + R+ + D SQ C +T +++W + + +++ L P Sbjct: 122 WLREAIPFLQQESRSAMPGVDALCSQICATFFTLAVREWIAQVNTEKNILSLLLHP 177
>SYT_PYRHO (O58430) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 625 Score = 28.9 bits (63), Expect = 9.0 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 7/68 (10%) Frame = -3 Query: 383 LKKWHGWLASSSFTVAMKLAPNKDKF-------MEVISGTGDIKADIEKFCTTFYPFLKE 225 L++ + T+A L KD+F MEV+ G G D E F KE Sbjct: 338 LRRLRAFTMPDMHTLAKDLEQAKDEFKKQFKLSMEVLKGVGLTPEDYEVAIRFTEDFWKE 397 Query: 224 NHDFLASV 201 N DF+ + Sbjct: 398 NRDFIVEL 405 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,439,312 Number of Sequences: 219361 Number of extensions: 1465057 Number of successful extensions: 3494 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 3445 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3494 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 3970331829 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)