Clone Name | rbah63m17 |
---|---|
Clone Library Name | barley_pub |
>ARGE_DICDI (P54638) Acetylornithine deacetylase (EC 3.5.1.16)| (Acetylornithinase) (AO) (N-acetylornithinase) (NAO) Length = 448 Score = 142 bits (359), Expect = 7e-34 Identities = 75/159 (47%), Positives = 101/159 (63%), Gaps = 4/159 (2%) Frame = -1 Query: 664 PGECTISGDIRLTPFYSTSIVVQKLKEYVDDINAGVETKLPTRGPVSKYVLPD----ENL 497 PGE TI GDIRLTPFY + K++ Y+ DINA + T+L RGP SKY +P E + Sbjct: 289 PGESTICGDIRLTPFYDMKEMRAKVEGYIKDINANI-TELRNRGPYSKYDVPASEGVEPV 347 Query: 496 RGRLEITFDGDVMNGVACNLESRGFQALCKATEEIVGYVEPYSITGSLPLIRELQDEGFD 317 +G + I + G+ GVAC L+S G++AL KAT EI+G + P + G+LPL+ +LQD GFD Sbjct: 348 KGSVSIEWLGEASAGVACKLDSDGYKALGKATSEILGSLTPVATCGTLPLVLDLQDSGFD 407 Query: 316 VQTAGYGLLKTYHAKNEYCLFSDMAQGFQVFVSIISQLE 200 +Q G+G +TYHA NEY L SD ++ I LE Sbjct: 408 IQITGFGKEETYHADNEYALLSDFKNAIKILSRTIDLLE 446
>NT53_DROME (P82149) Lethal(2)neighbour of tid protein 2 (NOT53)| Length = 484 Score = 32.0 bits (71), Expect = 1.7 Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 3/60 (5%) Frame = +3 Query: 243 AISENRQYSFFAWYVFSKPYPAV*TSNPSSCNSRIRGKLPVMEY-GSTYPT--ISSVALH 413 A S + Y F+ WY S PY A S P S R L ++EY +TYP+ SS ALH Sbjct: 418 ACSRSLHYQFYVWYFHSLPYLA--WSTPYSLGVRCL-ILGLIEYCWNTYPSTNFSSAALH 474
>NT56_DROME (Q27333) Lethal(2)neighbour of tid protein (NOT56) (NOT45)| Length = 510 Score = 32.0 bits (71), Expect = 1.7 Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 3/60 (5%) Frame = +3 Query: 243 AISENRQYSFFAWYVFSKPYPAV*TSNPSSCNSRIRGKLPVMEY-GSTYPT--ISSVALH 413 A S + Y F+ WY S PY A S P S R L ++EY +TYP+ SS ALH Sbjct: 418 ACSRSLHYQFYVWYFHSLPYLA--WSTPYSLGVRCL-ILGLIEYCWNTYPSTNFSSAALH 474
>SYA_VIBPA (Q87LR3) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 860 Score = 30.8 bits (68), Expect = 3.8 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = -1 Query: 463 VMNGVACNLESRGFQALCKATEEIVGY 383 +M GV N E FQAL KA E++GY Sbjct: 246 IMQGVHSNYEIDVFQALIKAAAEVIGY 272
>GA2L3_HUMAN (Q86XJ1) GAS2-like protein 3 (Growth arrest-specific 2-like 3)| Length = 694 Score = 30.8 bits (68), Expect = 3.8 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = -3 Query: 302 IWFTEDVPREERVLSVFRYGPRLSSVCKH 216 +WF ED+P R R+GP L++VC++ Sbjct: 7 VWFGEDLPLSPRSPLTPRHGPGLANVCQY 35
>NT56_DROVI (Q24332) Lethal(2)neighbour of Tid protein (NOT58)| Length = 526 Score = 30.4 bits (67), Expect = 4.9 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Frame = +3 Query: 243 AISENRQYSFFAWYVFSKPYPAV*TSNPSSCNSRIRGKLPVMEY-GSTYPTI--SSVALH 413 A + + Y F+ WY S PY + S P S R L ++EY +TYP+ SS+ALH Sbjct: 423 ACARSLHYQFYIWYFHSLPY--LVWSTPYSLGVRYL-ILGIIEYCWNTYPSTMESSIALH 479
>CDS1_ENCCU (Q95ZE3) Phosphatidate cytidylyltransferase (EC 2.7.7.41)| (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase) Length = 393 Score = 30.4 bits (67), Expect = 4.9 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 4/50 (8%) Frame = -2 Query: 321 LMFKQLDMVY*RRTT----RRTSIVCFQIWPKAFKCL*ASFRSWKMMLKP 184 L+F + M+Y R + RR S VCF + AF C AS R K LKP Sbjct: 120 LVFPSIMMMYFSRVSKCFLRRLSFVCFYSYVAAFMCFVASLR--KGRLKP 167
>IRS1A_XENLA (Q91615) Insulin receptor substrate 1-A (IRS1-A) (xIRS-1-A)| (XIRS-L) Length = 885 Score = 30.0 bits (66), Expect = 6.5 Identities = 23/72 (31%), Positives = 27/72 (37%) Frame = +3 Query: 318 SNPSSCNSRIRGKLPVMEYGSTYPTISSVALHNA*KPRDSRLQATPFITSPSKVISSLPR 497 +NP I GKLP +Y + P S P DS L + T P SLPR Sbjct: 433 TNPKLSIDSIEGKLPCSDYINMSPASGSTTS----TPPDSYLNSVEESTKPVYSYFSLPR 488 Query: 498 RFSSGRTYFETG 533 F E G Sbjct: 489 SFKHVHRKSEDG 500
>IRS1B_XENLA (P84770) Insulin receptor substrate 1-B (IRS1-B) (xIRS-1-B)| (XIRS-L') Length = 1088 Score = 30.0 bits (66), Expect = 6.5 Identities = 23/72 (31%), Positives = 27/72 (37%) Frame = +3 Query: 318 SNPSSCNSRIRGKLPVMEYGSTYPTISSVALHNA*KPRDSRLQATPFITSPSKVISSLPR 497 +NP I GKLP +Y + P S P DS L + T P SLPR Sbjct: 636 TNPKLSIDSIEGKLPCSDYINMSPASGSTTS----TPPDSYLNSVEESTKPVYSYFSLPR 691 Query: 498 RFSSGRTYFETG 533 F E G Sbjct: 692 SFKHVHRKSEDG 703 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,900,221 Number of Sequences: 219361 Number of extensions: 2020535 Number of successful extensions: 4341 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 4247 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4337 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6370891296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)