ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63m17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ARGE_DICDI (P54638) Acetylornithine deacetylase (EC 3.5.1.16) (A... 142 7e-34
2NT53_DROME (P82149) Lethal(2)neighbour of tid protein 2 (NOT53) 32 1.7
3NT56_DROME (Q27333) Lethal(2)neighbour of tid protein (NOT56) (N... 32 1.7
4SYA_VIBPA (Q87LR3) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 31 3.8
5GA2L3_HUMAN (Q86XJ1) GAS2-like protein 3 (Growth arrest-specific... 31 3.8
6NT56_DROVI (Q24332) Lethal(2)neighbour of Tid protein (NOT58) 30 4.9
7CDS1_ENCCU (Q95ZE3) Phosphatidate cytidylyltransferase (EC 2.7.7... 30 4.9
8IRS1A_XENLA (Q91615) Insulin receptor substrate 1-A (IRS1-A) (xI... 30 6.5
9IRS1B_XENLA (P84770) Insulin receptor substrate 1-B (IRS1-B) (xI... 30 6.5

>ARGE_DICDI (P54638) Acetylornithine deacetylase (EC 3.5.1.16)|
           (Acetylornithinase) (AO) (N-acetylornithinase) (NAO)
          Length = 448

 Score =  142 bits (359), Expect = 7e-34
 Identities = 75/159 (47%), Positives = 101/159 (63%), Gaps = 4/159 (2%)
 Frame = -1

Query: 664 PGECTISGDIRLTPFYSTSIVVQKLKEYVDDINAGVETKLPTRGPVSKYVLPD----ENL 497
           PGE TI GDIRLTPFY    +  K++ Y+ DINA + T+L  RGP SKY +P     E +
Sbjct: 289 PGESTICGDIRLTPFYDMKEMRAKVEGYIKDINANI-TELRNRGPYSKYDVPASEGVEPV 347

Query: 496 RGRLEITFDGDVMNGVACNLESRGFQALCKATEEIVGYVEPYSITGSLPLIRELQDEGFD 317
           +G + I + G+   GVAC L+S G++AL KAT EI+G + P +  G+LPL+ +LQD GFD
Sbjct: 348 KGSVSIEWLGEASAGVACKLDSDGYKALGKATSEILGSLTPVATCGTLPLVLDLQDSGFD 407

Query: 316 VQTAGYGLLKTYHAKNEYCLFSDMAQGFQVFVSIISQLE 200
           +Q  G+G  +TYHA NEY L SD     ++    I  LE
Sbjct: 408 IQITGFGKEETYHADNEYALLSDFKNAIKILSRTIDLLE 446



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>NT53_DROME (P82149) Lethal(2)neighbour of tid protein 2 (NOT53)|
          Length = 484

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
 Frame = +3

Query: 243 AISENRQYSFFAWYVFSKPYPAV*TSNPSSCNSRIRGKLPVMEY-GSTYPT--ISSVALH 413
           A S +  Y F+ WY  S PY A   S P S   R    L ++EY  +TYP+   SS ALH
Sbjct: 418 ACSRSLHYQFYVWYFHSLPYLA--WSTPYSLGVRCL-ILGLIEYCWNTYPSTNFSSAALH 474



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>NT56_DROME (Q27333) Lethal(2)neighbour of tid protein (NOT56) (NOT45)|
          Length = 510

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
 Frame = +3

Query: 243 AISENRQYSFFAWYVFSKPYPAV*TSNPSSCNSRIRGKLPVMEY-GSTYPT--ISSVALH 413
           A S +  Y F+ WY  S PY A   S P S   R    L ++EY  +TYP+   SS ALH
Sbjct: 418 ACSRSLHYQFYVWYFHSLPYLA--WSTPYSLGVRCL-ILGLIEYCWNTYPSTNFSSAALH 474



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>SYA_VIBPA (Q87LR3) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 860

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -1

Query: 463 VMNGVACNLESRGFQALCKATEEIVGY 383
           +M GV  N E   FQAL KA  E++GY
Sbjct: 246 IMQGVHSNYEIDVFQALIKAAAEVIGY 272



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>GA2L3_HUMAN (Q86XJ1) GAS2-like protein 3 (Growth arrest-specific 2-like 3)|
          Length = 694

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -3

Query: 302 IWFTEDVPREERVLSVFRYGPRLSSVCKH 216
           +WF ED+P   R     R+GP L++VC++
Sbjct: 7   VWFGEDLPLSPRSPLTPRHGPGLANVCQY 35



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>NT56_DROVI (Q24332) Lethal(2)neighbour of Tid protein (NOT58)|
          Length = 526

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = +3

Query: 243 AISENRQYSFFAWYVFSKPYPAV*TSNPSSCNSRIRGKLPVMEY-GSTYPTI--SSVALH 413
           A + +  Y F+ WY  S PY  +  S P S   R    L ++EY  +TYP+   SS+ALH
Sbjct: 423 ACARSLHYQFYIWYFHSLPY--LVWSTPYSLGVRYL-ILGIIEYCWNTYPSTMESSIALH 479



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>CDS1_ENCCU (Q95ZE3) Phosphatidate cytidylyltransferase (EC 2.7.7.41)|
           (CDP-diglyceride synthetase) (CDP-diglyceride
           pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS)
           (CTP:phosphatidate cytidylyltransferase) (CDP-DAG
           synthase) (CDP-DG synthetase)
          Length = 393

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = -2

Query: 321 LMFKQLDMVY*RRTT----RRTSIVCFQIWPKAFKCL*ASFRSWKMMLKP 184
           L+F  + M+Y  R +    RR S VCF  +  AF C  AS R  K  LKP
Sbjct: 120 LVFPSIMMMYFSRVSKCFLRRLSFVCFYSYVAAFMCFVASLR--KGRLKP 167



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>IRS1A_XENLA (Q91615) Insulin receptor substrate 1-A (IRS1-A) (xIRS-1-A)|
           (XIRS-L)
          Length = 885

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 23/72 (31%), Positives = 27/72 (37%)
 Frame = +3

Query: 318 SNPSSCNSRIRGKLPVMEYGSTYPTISSVALHNA*KPRDSRLQATPFITSPSKVISSLPR 497
           +NP      I GKLP  +Y +  P   S        P DS L +    T P     SLPR
Sbjct: 433 TNPKLSIDSIEGKLPCSDYINMSPASGSTTS----TPPDSYLNSVEESTKPVYSYFSLPR 488

Query: 498 RFSSGRTYFETG 533
            F       E G
Sbjct: 489 SFKHVHRKSEDG 500



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>IRS1B_XENLA (P84770) Insulin receptor substrate 1-B (IRS1-B) (xIRS-1-B)|
           (XIRS-L')
          Length = 1088

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 23/72 (31%), Positives = 27/72 (37%)
 Frame = +3

Query: 318 SNPSSCNSRIRGKLPVMEYGSTYPTISSVALHNA*KPRDSRLQATPFITSPSKVISSLPR 497
           +NP      I GKLP  +Y +  P   S        P DS L +    T P     SLPR
Sbjct: 636 TNPKLSIDSIEGKLPCSDYINMSPASGSTTS----TPPDSYLNSVEESTKPVYSYFSLPR 691

Query: 498 RFSSGRTYFETG 533
            F       E G
Sbjct: 692 SFKHVHRKSEDG 703


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,900,221
Number of Sequences: 219361
Number of extensions: 2020535
Number of successful extensions: 4341
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4337
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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