ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63m17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_506898.1| PREDICTED Oryza sativa (japonica cultivar-group... 428 e-116
2ref|XM_467237.1| Oryza sativa (japonica cultivar-group), mRNA 428 e-116
3dbj|AK105916.1| Oryza sativa (japonica cultivar-group) cDNA clon... 428 e-116
4dbj|AK101568.1| Oryza sativa (japonica cultivar-group) cDNA clon... 428 e-116
5gb|BT017221.1| Zea mays clone EL01N0372H02.c mRNA sequence 392 e-106
6gb|AY104516.1| Zea mays PCO121857 mRNA sequence 200 4e-48
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 167 6e-38
8dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic D... 167 6e-38
9dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
10emb|CR932963.2| Medicago truncatula chromosome 5 clone mth2-115p... 46 0.15
11emb|AL606783.13| Mouse DNA sequence from clone RP23-374O23 on ch... 44 0.58
12gb|AE017263.1| Mesoplasma florum L1 complete genome 42 2.3
13gb|AC010276.6|AC010276 Homo sapiens chromosome 5 clone CTC-504A5... 42 2.3
14dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete... 42 2.3
15ref|NM_126105.2| Arabidopsis thaliana triacylglycerol lipase AT5... 40 9.1
16ref|NM_117892.4| Arabidopsis thaliana metallopeptidase AT4G17830... 40 9.1
17gb|AC151846.3| Mus musculus BAC clone RP23-13B8 from chromosome ... 40 9.1
18gb|AC123075.5| Mus musculus BAC clone RP23-181C16 from chromosom... 40 9.1
19ref|XM_445951.1| Candida glabrata CBS138, CAGL0E06028g partial mRNA 40 9.1
20gb|AC124407.4| Mus musculus BAC clone RP24-389C22 from chromosom... 40 9.1
21emb|AL606527.6| Human DNA sequence from clone RP11-454G24 on chr... 40 9.1
22emb|AL354861.11| Human DNA sequence from clone RP11-180I4 on chr... 40 9.1
23gb|AY070021.1| Arabidopsis thaliana putative N-acetylornithine d... 40 9.1
24gb|AF360346.1| Arabidopsis thaliana putative N-acetylornithine d... 40 9.1
25emb|CR380951.1| Candida glabrata strain CBS138 chromosome E comp... 40 9.1
26gb|AC093431.2| Homo sapiens chromosome 1 clone RP11-574N2, compl... 40 9.1
27dbj|AK080912.1| Mus musculus 4 days neonate male adipose cDNA, R... 40 9.1
28dbj|AK079204.1| Mus musculus adult male urinary bladder cDNA, RI... 40 9.1
29dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
30emb|BX826950.1|CNS0A4BZ Arabidopsis thaliana Full-length cDNA Co... 40 9.1
31gb|AC097452.2| Homo sapiens BAC clone RP11-1J7 from 4, complete ... 40 9.1
32gb|AC108202.3| Homo sapiens BAC clone RP11-20M7 from 4, complete... 40 9.1
33emb|BX828519.1|CNS0A2DF Arabidopsis thaliana Full-length cDNA Co... 40 9.1
34emb|BX830109.1|CNS0A1CJ Arabidopsis thaliana Full-length cDNA Co... 40 9.1
35gb|AC154854.2| Mus musculus BAC clone RP23-23O4 from chromosome ... 40 9.1
36gb|AC151828.3| Mus musculus BAC clone RP24-444L19 from chromosom... 40 9.1
37emb|AL732612.28| Mouse DNA sequence from clone RP23-31L20 on chr... 40 9.1
38emb|AL713978.9| Mouse DNA sequence from clone RP23-159H8 on chro... 40 9.1
39dbj|AB020742.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 9.1
40emb|AL663004.3|OSJN00207 Oryza sativa genomic DNA, chromosome 4,... 40 9.1
41emb|AL662951.3|OSJN00154 Oryza sativa genomic DNA, chromosome 4,... 40 9.1
42emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 40 9.1
43gb|AC153955.3| Mus musculus 10 BAC RP24-167A12 (Roswell Park Can... 40 9.1 
>ref|XM_506898.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1148_D05.1
            patrial mRNA
          Length = 1652

 Score =  428 bits (216), Expect = e-116
 Identities = 404/466 (86%), Gaps = 3/466 (0%)
 Strand = Plus / Minus

                                                                        
Query: 199  cttccagctgcgaaatgatgcttacaaacacttgaaagccttgggccatatctgaaaaca 258
            |||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||||| |
Sbjct: 1398 cttccaactgtgaaatgatgctcagaaatacttgaaagccttgggccatatctgaaaata 1339

                                                                        
Query: 259  gacaatactcgttcttcgcgtggtacgtcttcagtaaaccatatccagctgtttgaacat 318
            |||| ||||||||||| |||||||| ||||| ||||| ||||| ||||| || |||||||
Sbjct: 1338 gacagtactcgttctttgcgtggtatgtcttgagtaagccatacccagcagtctgaacat 1279

                                                                        
Query: 319  caaatccttcatcctgtaattcccgaatcagaggcaaactcccggtgatggaatatggct 378
            |||| ||||||||||||||||||| |||||| |||| |||||| || ||||||||||| |
Sbjct: 1278 caaacccttcatcctgtaattccctaatcaggggcagactcccagtaatggaatatggtt 1219

                                                                        
Query: 379  ctacgtatccaactatttcctcagttgctttgcacaatgcttgaaagccccgagactcga 438
            | ||||  || || |||||||||||||||||||| |||||||||||||| || |||||||
Sbjct: 1218 ccacgtggccgacaatttcctcagttgctttgcataatgcttgaaagcctcgcgactcga 1159

                                                                        
Query: 439  gattacaggccaccccattcatcacatctccatcaaaagtgatttcaagccttcctcgca 498
            |||||||||||||||||||||| | |||| |||||| |||||| |||||||||||||| |
Sbjct: 1158 gattacaggccaccccattcataatatcttcatcaatagtgatctcaagccttcctcgga 1099

                                                                        
Query: 499  gattttcatccggaagaacatatttcgaaactggaccacgagtaggcagctttgtttcaa 558
            | |||||||| |||||||||||||| || || |||||||||||||| ||||   ||||||
Sbjct: 1098 ggttttcatcaggaagaacatatttagataccggaccacgagtaggaagct---tttcaa 1042

                                                                        
Query: 559  ctccagcatttatatcatctacatactcttttaacttctgaactacaatactcgtgctat 618
                  |||||||||||| ||||||||||| ||| ||||  ||||||    ||||||| |
Sbjct: 1041 tgttctcatttatatcatgtacatactcttgtaatttcttcactacagatgtcgtgctgt 982

                                                          
Query: 619  agaaaggagtcaaccttatatcccctgaaatcgtacattcaccagg 664
            ||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 981  agaaaggagtcaaccttatatcccctgaaattgtacattctccagg 936
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>ref|XM_467237.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1652

 Score =  428 bits (216), Expect = e-116
 Identities = 404/466 (86%), Gaps = 3/466 (0%)
 Strand = Plus / Minus

                                                                        
Query: 199  cttccagctgcgaaatgatgcttacaaacacttgaaagccttgggccatatctgaaaaca 258
            |||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||||| |
Sbjct: 1398 cttccaactgtgaaatgatgctcagaaatacttgaaagccttgggccatatctgaaaata 1339

                                                                        
Query: 259  gacaatactcgttcttcgcgtggtacgtcttcagtaaaccatatccagctgtttgaacat 318
            |||| ||||||||||| |||||||| ||||| ||||| ||||| ||||| || |||||||
Sbjct: 1338 gacagtactcgttctttgcgtggtatgtcttgagtaagccatacccagcagtctgaacat 1279

                                                                        
Query: 319  caaatccttcatcctgtaattcccgaatcagaggcaaactcccggtgatggaatatggct 378
            |||| ||||||||||||||||||| |||||| |||| |||||| || ||||||||||| |
Sbjct: 1278 caaacccttcatcctgtaattccctaatcaggggcagactcccagtaatggaatatggtt 1219

                                                                        
Query: 379  ctacgtatccaactatttcctcagttgctttgcacaatgcttgaaagccccgagactcga 438
            | ||||  || || |||||||||||||||||||| |||||||||||||| || |||||||
Sbjct: 1218 ccacgtggccgacaatttcctcagttgctttgcataatgcttgaaagcctcgcgactcga 1159

                                                                        
Query: 439  gattacaggccaccccattcatcacatctccatcaaaagtgatttcaagccttcctcgca 498
            |||||||||||||||||||||| | |||| |||||| |||||| |||||||||||||| |
Sbjct: 1158 gattacaggccaccccattcataatatcttcatcaatagtgatctcaagccttcctcgga 1099

                                                                        
Query: 499  gattttcatccggaagaacatatttcgaaactggaccacgagtaggcagctttgtttcaa 558
            | |||||||| |||||||||||||| || || |||||||||||||| ||||   ||||||
Sbjct: 1098 ggttttcatcaggaagaacatatttagataccggaccacgagtaggaagct---tttcaa 1042

                                                                        
Query: 559  ctccagcatttatatcatctacatactcttttaacttctgaactacaatactcgtgctat 618
                  |||||||||||| ||||||||||| ||| ||||  ||||||    ||||||| |
Sbjct: 1041 tgttctcatttatatcatgtacatactcttgtaatttcttcactacagatgtcgtgctgt 982

                                                          
Query: 619  agaaaggagtcaaccttatatcccctgaaatcgtacattcaccagg 664
            ||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 981  agaaaggagtcaaccttatatcccctgaaattgtacattctccagg 936
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>dbj|AK105916.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-H10, full
            insert sequence
          Length = 1711

 Score =  428 bits (216), Expect = e-116
 Identities = 404/466 (86%), Gaps = 3/466 (0%)
 Strand = Plus / Minus

                                                                        
Query: 199  cttccagctgcgaaatgatgcttacaaacacttgaaagccttgggccatatctgaaaaca 258
            |||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||||| |
Sbjct: 1457 cttccaactgtgaaatgatgctcagaaatacttgaaagccttgggccatatctgaaaata 1398

                                                                        
Query: 259  gacaatactcgttcttcgcgtggtacgtcttcagtaaaccatatccagctgtttgaacat 318
            |||| ||||||||||| |||||||| ||||| ||||| ||||| ||||| || |||||||
Sbjct: 1397 gacagtactcgttctttgcgtggtatgtcttgagtaagccatacccagcagtctgaacat 1338

                                                                        
Query: 319  caaatccttcatcctgtaattcccgaatcagaggcaaactcccggtgatggaatatggct 378
            |||| ||||||||||||||||||| |||||| |||| |||||| || ||||||||||| |
Sbjct: 1337 caaacccttcatcctgtaattccctaatcaggggcagactcccagtaatggaatatggtt 1278

                                                                        
Query: 379  ctacgtatccaactatttcctcagttgctttgcacaatgcttgaaagccccgagactcga 438
            | ||||  || || |||||||||||||||||||| |||||||||||||| || |||||||
Sbjct: 1277 ccacgtggccgacaatttcctcagttgctttgcataatgcttgaaagcctcgcgactcga 1218

                                                                        
Query: 439  gattacaggccaccccattcatcacatctccatcaaaagtgatttcaagccttcctcgca 498
            |||||||||||||||||||||| | |||| |||||| |||||| |||||||||||||| |
Sbjct: 1217 gattacaggccaccccattcataatatcttcatcaatagtgatctcaagccttcctcgga 1158

                                                                        
Query: 499  gattttcatccggaagaacatatttcgaaactggaccacgagtaggcagctttgtttcaa 558
            | |||||||| |||||||||||||| || || |||||||||||||| ||||   ||||||
Sbjct: 1157 ggttttcatcaggaagaacatatttagataccggaccacgagtaggaagct---tttcaa 1101

                                                                        
Query: 559  ctccagcatttatatcatctacatactcttttaacttctgaactacaatactcgtgctat 618
                  |||||||||||| ||||||||||| ||| ||||  ||||||    ||||||| |
Sbjct: 1100 tgttctcatttatatcatgtacatactcttgtaatttcttcactacagatgtcgtgctgt 1041

                                                          
Query: 619  agaaaggagtcaaccttatatcccctgaaatcgtacattcaccagg 664
            ||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 1040 agaaaggagtcaaccttatatcccctgaaattgtacattctccagg 995
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>dbj|AK101568.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050F24, full
            insert sequence
          Length = 1688

 Score =  428 bits (216), Expect = e-116
 Identities = 404/466 (86%), Gaps = 3/466 (0%)
 Strand = Plus / Minus

                                                                        
Query: 199  cttccagctgcgaaatgatgcttacaaacacttgaaagccttgggccatatctgaaaaca 258
            |||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||||| |
Sbjct: 1434 cttccaactgtgaaatgatgctcagaaatacttgaaagccttgggccatatctgaaaata 1375

                                                                        
Query: 259  gacaatactcgttcttcgcgtggtacgtcttcagtaaaccatatccagctgtttgaacat 318
            |||| ||||||||||| |||||||| ||||| ||||| ||||| ||||| || |||||||
Sbjct: 1374 gacagtactcgttctttgcgtggtatgtcttgagtaagccatacccagcagtctgaacat 1315

                                                                        
Query: 319  caaatccttcatcctgtaattcccgaatcagaggcaaactcccggtgatggaatatggct 378
            |||| ||||||||||||||||||| |||||| |||| |||||| || ||||||||||| |
Sbjct: 1314 caaacccttcatcctgtaattccctaatcaggggcagactcccagtaatggaatatggtt 1255

                                                                        
Query: 379  ctacgtatccaactatttcctcagttgctttgcacaatgcttgaaagccccgagactcga 438
            | ||||  || || |||||||||||||||||||| |||||||||||||| || |||||||
Sbjct: 1254 ccacgtggccgacaatttcctcagttgctttgcataatgcttgaaagcctcgcgactcga 1195

                                                                        
Query: 439  gattacaggccaccccattcatcacatctccatcaaaagtgatttcaagccttcctcgca 498
            |||||||||||||||||||||| | |||| |||||| |||||| |||||||||||||| |
Sbjct: 1194 gattacaggccaccccattcataatatcttcatcaatagtgatctcaagccttcctcgga 1135

                                                                        
Query: 499  gattttcatccggaagaacatatttcgaaactggaccacgagtaggcagctttgtttcaa 558
            | |||||||| |||||||||||||| || || |||||||||||||| ||||   ||||||
Sbjct: 1134 ggttttcatcaggaagaacatatttagataccggaccacgagtaggaagct---tttcaa 1078

                                                                        
Query: 559  ctccagcatttatatcatctacatactcttttaacttctgaactacaatactcgtgctat 618
                  |||||||||||| ||||||||||| ||| ||||  ||||||    ||||||| |
Sbjct: 1077 tgttctcatttatatcatgtacatactcttgtaatttcttcactacagatgtcgtgctgt 1018

                                                          
Query: 619  agaaaggagtcaaccttatatcccctgaaatcgtacattcaccagg 664
            ||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 1017 agaaaggagtcaaccttatatcccctgaaattgtacattctccagg 972
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>gb|BT017221.1| Zea mays clone EL01N0372H02.c mRNA sequence
          Length = 1252

 Score =  392 bits (198), Expect = e-106
 Identities = 310/346 (89%), Gaps = 1/346 (0%)
 Strand = Plus / Minus

                                                                       
Query: 198 tcttccagctgcgaaatgatgcttacaaacacttgaaagccttgggccatatctgaaaac 257
           ||||||||||| ||||||||||| | |||||| |||||||| |||||||| |||||||||
Sbjct: 907 tcttccagctgtgaaatgatgctcagaaacacctgaaagccctgggccatgtctgaaaac 848

                                                                       
Query: 258 agacaatactcgttcttcgcgtggtacgtcttcagtaaaccatatccagctgtttgaaca 317
           ||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 847 agacagtactcgttcttcgcatggtacgtcttcagtaagccatatccagctgtttgaaca 788

                                                                       
Query: 318 tcaaatccttcatcctgtaattcccgaatcagaggcaaactcccggtgatggaatatggc 377
           |||||||| || ||||||||| |||| || ||||| | ||||||||||||||||||||||
Sbjct: 787 tcaaatccctcgtcctgtaatccccggattagaggtagactcccggtgatggaatatggc 728

                                                                       
Query: 378 tctacgtatccaactatttcctcagttgctttgcacaatgcttgaaagccccgagactcg 437
           || ||||  |||||||||||||  ||||||||||| ||||| ||| |||| |||||||| 
Sbjct: 727 tccacgtggccaactatttccttggttgctttgcataatgcatgatagcctcgagactcc 668

                                                                       
Query: 438 agattacaggcca-ccccattcatcacatctccatcaaaagtgatttcaagccttcctcg 496
           ||||| || |||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 667 agattgcaagccacccccattcatcacatctccatcaaaagtgatttcaagccttccttg 608

                                                         
Query: 497 cagattttcatccggaagaacatatttcgaaactggaccacgagta 542
            ||||||||||| ||||||| |||||| || || ||||||||||||
Sbjct: 607 tagattttcatcaggaagaatatatttggacacaggaccacgagta 562



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                          
Query: 612 gtgctatagaaaggagtcaaccttatatcccctgaaatcgtacattc 658
           ||||||||||||||||||||||||| |||||||||||| || |||||
Sbjct: 492 gtgctatagaaaggagtcaaccttacatcccctgaaattgtgcattc 446
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>gb|AY104516.1| Zea mays PCO121857 mRNA sequence
          Length = 939

 Score =  200 bits (101), Expect = 4e-48
 Identities = 197/227 (86%), Gaps = 3/227 (1%)
 Strand = Plus / Minus

                                                                       
Query: 319 caaatccttcatcctgtaattcccgaatcag-aggcaaactcccggtgatggaatatggc 377
           |||||||||| | |||||||||||| || || ||| | ||||||||||||||||||||||
Sbjct: 859 caaatccttcgttctgtaattcccggataaggaggtagactcccggtgatggaatatggc 800

                                                                       
Query: 378 tctac--gtatccaactatttcctcagttgctttgcacaatgcttgaaagccccgagact 435
           |   |  ||  |||||||||||||  ||||||||||| ||||| ||| |||| |||||||
Sbjct: 799 tncccnagtggccaactatttccttggttgctttgcataatgcatgatagcctcgagact 740

                                                                       
Query: 436 cgagattacaggccaccccattcatcacatctccatcaaaagtgatttcaagccttcctc 495
           | ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 739 ccagattgcaagccaccccattcatcacatctccatcaaaagtgatttcaagccttcctt 680

                                                          
Query: 496 gcagattttcatccggaagaacatatttcgaaactggaccacgagta 542
           | ||||||||||| ||||||| |||||| || || ||||||||||||
Sbjct: 679 gtagattttcatcaggaagaatatatttggacacaggaccacgagta 633



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                          
Query: 612 gtgctatagaaaggagtcaaccttatatcccctgaaatcgtacattc 658
           ||||||||||||||||||||||||| |||||||||||| || |||||
Sbjct: 563 gtgctatagaaaggagtcaaccttacatcccctgaaattgtgcattc 517
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  167 bits (84), Expect = 6e-38
 Identities = 141/160 (88%)
 Strand = Plus / Minus

                                                                            
Query: 331      cctgtaattcccgaatcagaggcaaactcccggtgatggaatatggctctacgtatccaa 390
                |||||||||||| |||||| |||| |||||| || ||||||||||| || ||||  || |
Sbjct: 28384682 cctgtaattccctaatcaggggcagactcccagtaatggaatatggttccacgtggccga 28384623

                                                                            
Query: 391      ctatttcctcagttgctttgcacaatgcttgaaagccccgagactcgagattacaggcca 450
                | |||||||||||||||||||| |||||||||||||| || |||||||||||||||||||
Sbjct: 28384622 caatttcctcagttgctttgcataatgcttgaaagcctcgcgactcgagattacaggcca 28384563

                                                        
Query: 451      ccccattcatcacatctccatcaaaagtgatttcaagcct 490
                |||||||||| | |||| |||||| |||||| ||||||||
Sbjct: 28384562 ccccattcataatatcttcatcaatagtgatctcaagcct 28384523



 Score =  113 bits (57), Expect = 8e-22
 Identities = 87/97 (89%)
 Strand = Plus / Minus

                                                                            
Query: 199      cttccagctgcgaaatgatgcttacaaacacttgaaagccttgggccatatctgaaaaca 258
                |||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||||| |
Sbjct: 28385142 cttccaactgtgaaatgatgctcagaaatacttgaaagccttgggccatatctgaaaata 28385083

                                                     
Query: 259      gacaatactcgttcttcgcgtggtacgtcttcagtaa 295
                |||| ||||||||||| |||||||| ||||| |||||
Sbjct: 28385082 gacagtactcgttctttgcgtggtatgtcttgagtaa 28385046



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                            
Query: 488      ccttcctcgcagattttcatccggaagaacatatttcgaaactggaccacgagtaggcag 547
                ||||||||| || |||||||| |||||||||||||| || || |||||||||||||| ||
Sbjct: 28384424 ccttcctcggaggttttcatcaggaagaacatatttagataccggaccacgagtaggaag 28384365

                    
Query: 548      cttt 551
                ||||
Sbjct: 28384364 cttt 28384361



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                  
Query: 631      accttatatcccctgaaatcgtacattcaccagg 664
                ||||||||||||||||||| |||||||| |||||
Sbjct: 28383584 accttatatcccctgaaattgtacattctccagg 28383551



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                       
Query: 296      accatatccagctgtttgaacatcaaatccttcatcctg 334
                |||||| ||||| || ||||||||||| |||||||||||
Sbjct: 28384798 accatacccagcagtctgaacatcaaacccttcatcctg 28384760
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>dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1148_D05
          Length = 155146

 Score =  167 bits (84), Expect = 6e-38
 Identities = 141/160 (88%)
 Strand = Plus / Minus

                                                                        
Query: 331  cctgtaattcccgaatcagaggcaaactcccggtgatggaatatggctctacgtatccaa 390
            |||||||||||| |||||| |||| |||||| || ||||||||||| || ||||  || |
Sbjct: 8803 cctgtaattccctaatcaggggcagactcccagtaatggaatatggttccacgtggccga 8744

                                                                        
Query: 391  ctatttcctcagttgctttgcacaatgcttgaaagccccgagactcgagattacaggcca 450
            | |||||||||||||||||||| |||||||||||||| || |||||||||||||||||||
Sbjct: 8743 caatttcctcagttgctttgcataatgcttgaaagcctcgcgactcgagattacaggcca 8684

                                                    
Query: 451  ccccattcatcacatctccatcaaaagtgatttcaagcct 490
            |||||||||| | |||| |||||| |||||| ||||||||
Sbjct: 8683 ccccattcataatatcttcatcaatagtgatctcaagcct 8644



 Score =  113 bits (57), Expect = 8e-22
 Identities = 87/97 (89%)
 Strand = Plus / Minus

                                                                        
Query: 199  cttccagctgcgaaatgatgcttacaaacacttgaaagccttgggccatatctgaaaaca 258
            |||||| ||| ||||||||||| | ||| ||||||||||||||||||||||||||||| |
Sbjct: 9263 cttccaactgtgaaatgatgctcagaaatacttgaaagccttgggccatatctgaaaata 9204

                                                 
Query: 259  gacaatactcgttcttcgcgtggtacgtcttcagtaa 295
            |||| ||||||||||| |||||||| ||||| |||||
Sbjct: 9203 gacagtactcgttctttgcgtggtatgtcttgagtaa 9167



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                        
Query: 488  ccttcctcgcagattttcatccggaagaacatatttcgaaactggaccacgagtaggcag 547
            ||||||||| || |||||||| |||||||||||||| || || |||||||||||||| ||
Sbjct: 8545 ccttcctcggaggttttcatcaggaagaacatatttagataccggaccacgagtaggaag 8486

                
Query: 548  cttt 551
            ||||
Sbjct: 8485 cttt 8482



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 631  accttatatcccctgaaatcgtacattcaccagg 664
            ||||||||||||||||||| |||||||| |||||
Sbjct: 7705 accttatatcccctgaaattgtacattctccagg 7672



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 296  accatatccagctgtttgaacatcaaatccttcatcctg 334
            |||||| ||||| || ||||||||||| |||||||||||
Sbjct: 8919 accatacccagcagtctgaacatcaaacccttcatcctg 8881
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>dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1743_B12
          Length = 175645

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 631    accttatatcccctgaaatcgtacattcaccagg 664
              ||||||||||||||||||| |||||||| |||||
Sbjct: 175341 accttatatcccctgaaattgtacattctccagg 175308
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>emb|CR932963.2| Medicago truncatula chromosome 5 clone mth2-115p22, COMPLETE SEQUENCE
          Length = 133910

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 62/75 (82%)
 Strand = Plus / Minus

                                                                         
Query: 338   ttcccgaatcagaggcaaactcccggtgatggaatatggctctacgtatccaactatttc 397
             ||||||||| |||||||| ||||| || || ||  | |||| ||| |  ||||| |||||
Sbjct: 37079 ttcccgaatgagaggcaagctcccagtaattgagaaaggctttacatggccaacaatttc 37020

                            
Query: 398   ctcagttgctttgca 412
             |||||||||||||||
Sbjct: 37019 ctcagttgctttgca 37005



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 312   tgaacatcaaatccttcatcctgt 335
             ||||||||||| ||||||||||||
Sbjct: 37181 tgaacatcaaaaccttcatcctgt 37158
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>emb|AL606783.13| Mouse DNA sequence from clone RP23-374O23 on chromosome 13 Contains
             part of the gene for a novel protein similar to axonemal
             dynein heavy polypeptide (DNAH), complete sequence
          Length = 127451

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 239   ttgggccatatctgaaaacaga 260
             ||||||||||||||||||||||
Sbjct: 49442 ttgggccatatctgaaaacaga 49463
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>gb|AE017263.1| Mesoplasma florum L1 complete genome
          Length = 793224

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 562   cagcatttatatcatctacat 582
             |||||||||||||||||||||
Sbjct: 60117 cagcatttatatcatctacat 60097
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>gb|AC010276.6|AC010276 Homo sapiens chromosome 5 clone CTC-504A5, complete sequence
          Length = 207842

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   aacatcaaatccttcatcctg 334
             |||||||||||||||||||||
Sbjct: 54918 aacatcaaatccttcatcctg 54938
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>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 330    tcctgtaattcccgaatcaga 350
              |||||||||||||||||||||
Sbjct: 317268 tcctgtaattcccgaatcaga 317288
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>ref|NM_126105.2| Arabidopsis thaliana triacylglycerol lipase AT5G67050 mRNA, complete
            cds
          Length = 1488

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 308  tgtttgaacatcaaatcctt 327
            ||||||||||||||||||||
Sbjct: 1153 tgtttgaacatcaaatcctt 1134
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>ref|NM_117892.4| Arabidopsis thaliana metallopeptidase AT4G17830 mRNA, complete cds
          Length = 1553

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 83/104 (79%)
 Strand = Plus / Minus

                                                                        
Query: 309  gtttgaacatcaaatccttcatcctgtaattcccgaatcagaggcaaactcccggtgatg 368
            ||||| |||||||| ||||||||||| |  || || || ||||| ||| | |||||||| 
Sbjct: 1241 gtttgcacatcaaaaccttcatcctggaggtctcggattagaggtaaagtaccggtgatc 1182

                                                        
Query: 369  gaatatggctctacgtatccaactatttcctcagttgctttgca 412
            || || ||||  |||| |||||| | ||| || |||||||||||
Sbjct: 1181 gagtaaggcttcacgtgtccaacaacttcttcggttgctttgca 1138
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>gb|AC151846.3| Mus musculus BAC clone RP23-13B8 from chromosome 10, complete sequence
          Length = 252639

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 288    ttcagtaaaccatatccagc 307
              ||||||||||||||||||||
Sbjct: 206688 ttcagtaaaccatatccagc 206669
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>gb|AC123075.5| Mus musculus BAC clone RP23-181C16 from chromosome 3, complete sequence
          Length = 198063

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    agctcaaaacactattatta 130
              ||||||||||||||||||||
Sbjct: 124116 agctcaaaacactattatta 124135
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>ref|XM_445951.1| Candida glabrata CBS138, CAGL0E06028g partial mRNA
          Length = 999

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 10  aattgccttatgtatggttncca 32
           ||||||||||||||||||| |||
Sbjct: 670 aattgccttatgtatggtttcca 692
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>gb|AC124407.4| Mus musculus BAC clone RP24-389C22 from chromosome 10, complete sequence
          Length = 157929

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 288    ttcagtaaaccatatccagc 307
              ||||||||||||||||||||
Sbjct: 110446 ttcagtaaaccatatccagc 110465
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>emb|AL606527.6| Human DNA sequence from clone RP11-454G24 on chromosome 1 Contains a
              alcohol dehydrogenase 5 (class III) chi polypeptide (ADH5)
              pseudogene, complete sequence
          Length = 179964

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    aatatgtatctaataaggta 167
              ||||||||||||||||||||
Sbjct: 125257 aatatgtatctaataaggta 125238
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>emb|AL354861.11| Human DNA sequence from clone RP11-180I4 on chromosome 9 Contains an
              alpha type 7 proteasome subunit (PSMA7) pseudogene, the 3'
              end of a novel gene, a novel gene and a CpG island,
              complete sequence
          Length = 182653

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    aaaacactattattagatct 135
              ||||||||||||||||||||
Sbjct: 120314 aaaacactattattagatct 120295
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>gb|AY070021.1| Arabidopsis thaliana putative N-acetylornithine deacetylase
            (At4g17830) mRNA, complete cds
          Length = 1354

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 83/104 (79%)
 Strand = Plus / Minus

                                                                        
Query: 309  gtttgaacatcaaatccttcatcctgtaattcccgaatcagaggcaaactcccggtgatg 368
            ||||| |||||||| ||||||||||| |  || || || ||||| ||| | |||||||| 
Sbjct: 1205 gtttgcacatcaaaaccttcatcctggaggtctcggattagaggtaaagtaccggtgatc 1146

                                                        
Query: 369  gaatatggctctacgtatccaactatttcctcagttgctttgca 412
            || || ||||  |||| |||||| | ||| || |||||||||||
Sbjct: 1145 gagtaaggcttcacgtgtccaacaacttcttcggttgctttgca 1102
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>gb|AF360346.1| Arabidopsis thaliana putative N-acetylornithine deacetylase
            (At4g17830) mRNA, complete cds
          Length = 1537

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 83/104 (79%)
 Strand = Plus / Minus

                                                                        
Query: 309  gtttgaacatcaaatccttcatcctgtaattcccgaatcagaggcaaactcccggtgatg 368
            ||||| |||||||| ||||||||||| |  || || || ||||| ||| | |||||||| 
Sbjct: 1229 gtttgcacatcaaaaccttcatcctggaggtctcggattagaggtaaagtaccggtgatc 1170

                                                        
Query: 369  gaatatggctctacgtatccaactatttcctcagttgctttgca 412
            || || ||||  |||| |||||| | ||| || |||||||||||
Sbjct: 1169 gagtaaggcttcacgtgtccaacaacttcttcggttgctttgca 1126
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>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence
          Length = 687501

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 10     aattgccttatgtatggttncca 32
              ||||||||||||||||||| |||
Sbjct: 598452 aattgccttatgtatggtttcca 598474
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>gb|AC093431.2| Homo sapiens chromosome 1 clone RP11-574N2, complete sequence
          Length = 164454

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   aatatgtatctaataaggta 167
             ||||||||||||||||||||
Sbjct: 54687 aatatgtatctaataaggta 54706
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>dbj|AK080912.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length
            enriched library, clone:B430206K05
            product:unclassifiable, full insert sequence
          Length = 1865

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 288  ttcagtaaaccatatccagc 307
            ||||||||||||||||||||
Sbjct: 1133 ttcagtaaaccatatccagc 1114
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>dbj|AK079204.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length
            enriched library, clone:9530027K12 product:similar to KH
            TYPE SPLICING REGULATORY PROTEIN KSRP (FRAGMENT) [Mus
            musculus], full insert sequence
          Length = 2093

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 111  agctcaaaacactattatta 130
            ||||||||||||||||||||
Sbjct: 1253 agctcaaaacactattatta 1234
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 545     cagctttgtttcaactccag 564
               ||||||||||||||||||||
Sbjct: 2986408 cagctttgtttcaactccag 2986389
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>emb|BX826950.1|CNS0A4BZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB79ZG04 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1503

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 83/104 (79%)
 Strand = Plus / Minus

                                                                        
Query: 309  gtttgaacatcaaatccttcatcctgtaattcccgaatcagaggcaaactcccggtgatg 368
            ||||| |||||||| ||||||||||| |  || || || ||||| ||| | |||||||| 
Sbjct: 1210 gtttgcacatcaaaaccttcatcctggaggtctcggattagaggtaaagtaccggtgatc 1151

                                                        
Query: 369  gaatatggctctacgtatccaactatttcctcagttgctttgca 412
            || || ||||  |||| |||||| | ||| || |||||||||||
Sbjct: 1150 gagtaaggcttcacgtgtccaacaacttcttcggttgctttgca 1107
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>gb|AC097452.2| Homo sapiens BAC clone RP11-1J7 from 4, complete sequence
          Length = 118322

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     ggggtgtaattgccttatgt 22
             ||||||||||||||||||||
Sbjct: 56426 ggggtgtaattgccttatgt 56407
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>gb|AC108202.3| Homo sapiens BAC clone RP11-20M7 from 4, complete sequence
          Length = 154274

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 310   tttgaacatcaaatccttca 329
             ||||||||||||||||||||
Sbjct: 76799 tttgaacatcaaatccttca 76780
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>emb|BX828519.1|CNS0A2DF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL11ZD08 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 1577

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 83/104 (79%)
 Strand = Plus / Minus

                                                                        
Query: 309  gtttgaacatcaaatccttcatcctgtaattcccgaatcagaggcaaactcccggtgatg 368
            ||||| |||||||| ||||||||||| |  || || || ||||| ||| | |||||||| 
Sbjct: 1290 gtttgcacatcaaaaccttcatcctggaggtctcggattagaggtaaagtaccggtgatc 1231

                                                        
Query: 369  gaatatggctctacgtatccaactatttcctcagttgctttgca 412
            || || ||||  |||| |||||| | ||| || |||||||||||
Sbjct: 1230 gagtaaggcttcacgtgtccaacaacttcttcggttgctttgca 1187
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>emb|BX830109.1|CNS0A1CJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB60ZA06 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1489

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 308  tgtttgaacatcaaatcctt 327
            ||||||||||||||||||||
Sbjct: 1153 tgtttgaacatcaaatcctt 1134
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>gb|AC154854.2| Mus musculus BAC clone RP23-23O4 from chromosome 16, complete sequence
          Length = 209970

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 644    tgaaatcgtacattcaccag 663
              ||||||||||||||||||||
Sbjct: 166339 tgaaatcgtacattcaccag 166320
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>gb|AC151828.3| Mus musculus BAC clone RP24-444L19 from chromosome 10, complete sequence
          Length = 222344

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 288    ttcagtaaaccatatccagc 307
              ||||||||||||||||||||
Sbjct: 201685 ttcagtaaaccatatccagc 201704
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>emb|AL732612.28| Mouse DNA sequence from clone RP23-31L20 on chromosome 11, complete
            sequence
          Length = 145244

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 585  tcttttaacttctgaactac 604
            ||||||||||||||||||||
Sbjct: 2020 tcttttaacttctgaactac 2039
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>emb|AL713978.9| Mouse DNA sequence from clone RP23-159H8 on chromosome X, complete
              sequence
          Length = 183455

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 588    tttaacttctgaactacaat 607
              ||||||||||||||||||||
Sbjct: 112451 tttaacttctgaactacaat 112432
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>dbj|AB020742.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21H1
          Length = 74342

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 308  tgtttgaacatcaaatcctt 327
            ||||||||||||||||||||
Sbjct: 1368 tgtttgaacatcaaatcctt 1387
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>emb|AL663004.3|OSJN00207 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0049I21,
              complete sequence
          Length = 141935

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 545    cagctttgtttcaactccag 564
              ||||||||||||||||||||
Sbjct: 118294 cagctttgtttcaactccag 118275
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>emb|AL662951.3|OSJN00154 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011E07,
             complete sequence
          Length = 165094

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 545   cagctttgtttcaactccag 564
             ||||||||||||||||||||
Sbjct: 47483 cagctttgtttcaactccag 47464
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>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 302     tccagctgtttgaacatcaa 321
               ||||||||||||||||||||
Sbjct: 2703482 tccagctgtttgaacatcaa 2703463
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>gb|AC153955.3| Mus musculus 10 BAC RP24-167A12 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 154271

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 331    cctgtaattcccgaatcagaggca 354
              ||||||||||| ||||||||||||
Sbjct: 113617 cctgtaattccagaatcagaggca 113640


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,570,685
Number of Sequences: 3902068
Number of extensions: 5570685
Number of successful extensions: 94359
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94183
Number of HSP's gapped (non-prelim): 170
length of query: 664
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 641
effective length of database: 17,143,297,704
effective search space: 10988853828264
effective search space used: 10988853828264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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