ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63m13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478377.1| Oryza sativa (japonica cultivar-group), mRNA 422 e-115
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 422 e-115
3dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic D... 422 e-115
4dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic D... 422 e-115
5dbj|AK072104.1| Oryza sativa (japonica cultivar-group) cDNA clon... 422 e-115
6dbj|AK105071.1| Oryza sativa (japonica cultivar-group) cDNA clon... 414 e-112
7dbj|AK064835.1| Oryza sativa (japonica cultivar-group) cDNA clon... 414 e-112
8gb|AY108268.1| Zea mays PCO078526 mRNA sequence 381 e-102
9emb|X70650.1|OSATPASE O.sinensis mRNA for gamma subunit of plast... 70 7e-09
10gb|AY826836.1| Isochrysis galbana clone ISATPG1 chloroplast ATP ... 54 4e-04
11gb|J04219.1|CREATPS C.reinhardtii chloroplast ATP synthase gamma... 50 0.007
12gb|M73493.1|CREATPC Chlamydomonas reinhardtii ATP synthase (CF1)... 50 0.007
13gb|AC087888.12| Homo sapiens 12 BAC RP11-228G3 (Roswell Park Can... 48 0.027
14gb|AC114785.5| Homo sapiens BAC clone RP11-607G14 from 2, comple... 44 0.42
15gb|U88181.1| Caenorhabditis elegans cosmid C55B6, complete sequence 42 1.6
16gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
17gb|AC129330.4| Mus musculus BAC clone RP23-61B8 from chromosome ... 42 1.6
18gb|AC125536.3| Mus musculus BAC clone RP24-142N21 from chromosom... 42 1.6
19emb|AL158817.11| Human DNA sequence from clone RP3-429O6 on chro... 42 1.6
20gb|AY267622.1| Bigelowiella natans ATP synthase gamma subunit mR... 42 1.6
21gb|AC068298.16| Homo sapiens 3 BAC RP11-496B10 (Roswell Park Can... 42 1.6
22gb|DQ122880.1| Chlamydomonas incerta chloroplast ATP synthase ga... 42 1.6
23gb|AC118139.3| Homo sapiens BAC clone RP11-461K12 from 4, comple... 42 1.6
24gb|AC107365.2| Danio rerio, clone -241I7, complete sequence 42 1.6
25gb|DQ337864.1| Uncultured bacterium clone Psedi_nirS-31 NirS (ni... 42 1.6
26dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
27gb|AF088219.1|AF088219 Homo sapiens CC chemokine gene cluster, c... 42 1.6
28emb|CR382300.12| Zebrafish DNA sequence from clone DKEY-25E11 in... 42 1.6
29gb|AC006572.2|AC006572 Homo sapiens, clone hRPK.60_A_1, complete... 42 1.6
30gb|AC004675.1|AC004675 Homo sapiens chromosome 17, clone hCIT.18... 42 1.6
31gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 6.5
32gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 6.5
33gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 6.5
34gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 6.5
35gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 6.5
36gb|AC122903.4| Mus musculus BAC clone RP23-44N5 from chromosome ... 40 6.5
37gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate h... 40 6.5
38emb|Z81119.1|CET10H4 Caenorhabditis elegans Cosmid T10H4, comple... 40 6.5
39gb|AC126686.3| Mus musculus BAC clone RP23-148C24 from 18, compl... 40 6.5
40gb|AC118351.14| Rattus norvegicus 1 BAC CH230-362O18 (Children's... 40 6.5
41emb|AL365214.16| Human DNA sequence from clone RP11-506B6 on chr... 40 6.5
42gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 6.5
43gb|AC154570.2| Mus musculus BAC clone RP23-385M5 from chromosome... 40 6.5
44gb|AC006454.4| Homo sapiens PAC clone RP5-852P6 from 7, complete... 40 6.5
45emb|BX927151.1| Corynebacterium glutamicum ATCC 13032, IS finger... 40 6.5
46emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.5
47emb|AL929280.6| Mouse DNA sequence from clone RP23-67M20 on chro... 40 6.5
48emb|AL663060.6| Mouse DNA sequence from clone RP23-239H6 on chro... 40 6.5
49gb|AC011193.3| Homo sapiens chromosome 17, clone RP11-521P1, com... 40 6.5
50gb|AC073761.4| Mus musculus chromosome 17 clone RP23-33K21, comp... 40 6.5
51gb|AC092745.7| Homo sapiens 12 BAC RP11-90D4 (Roswell Park Cance... 40 6.5
52gb|AC092111.9| Homo sapiens 12 BAC RP11-266K4 (Roswell Park Canc... 40 6.5
53dbj|AB232920.1| Oryzias latipes hox gene cluster, complete cds, ... 40 6.5
54gb|AC175781.3| Cavia porcellus clone CH234-402D11, complete sequ... 40 6.5
55gb|DQ337883.1| Uncultured bacterium clone S1m_nirS-22 NirS (nirS... 40 6.5
56gb|DQ337869.1| Uncultured bacterium clone Psedi_nirS-41 NirS (ni... 40 6.5
57gb|DQ337840.1| Uncultured bacterium clone P1m_nirS-15 NirS (nirS... 40 6.5
58gb|AC122754.13| Mus musculus chromosome 1, clone RP24-510K10, co... 40 6.5
59gb|AC157870.3| Loxodonta africana clone VMRC15-210D1, complete s... 40 6.5
60dbj|AK051229.1| Mus musculus 12 days embryo spinal ganglion cDNA... 40 6.5
61gb|AC012336.9|AC012336 Homo sapiens chromosome 17, clone CTD-223... 40 6.5
62dbj|AK037782.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 40 6.5
63dbj|AK043901.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 40 6.5
64dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
65dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
66dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl... 40 6.5
67gb|AC105916.4| Homo sapiens BAC clone RP11-180A12 from 4, comple... 40 6.5
68emb|AL929073.19| Mouse DNA sequence from clone RP23-125D6 on chr... 40 6.5
69dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
70dbj|AP004328.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
71dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
72dbj|AK121910.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
73dbj|AK101846.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
74gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 6.5
75gb|AC154142.24| Mus musculus chromosome 1, clone RP23-187M7, com... 40 6.5
76emb|AL845291.5| Mouse DNA sequence from clone RP23-1O11 on chrom... 40 6.5
77dbj|AB032374.1| Mus musculus gene for Tbr1, 5' flanking region 40 6.5
78dbj|AB015309.1| Acidovorax sp. TP4 gene for PHB depolymerase, co... 40 6.5 
>ref|XM_478377.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1469

 Score =  422 bits (213), Expect = e-115
 Identities = 294/321 (91%)
 Strand = Plus / Minus

                                                                        
Query: 155  agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 214
            |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||  ||
Sbjct: 1119 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 1060

                                                                        
Query: 215  cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 274
            || ||||||||||||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 1059 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 1000

                                                                        
Query: 275  atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 334
            ||||||||||||||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 999  atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 940

                                                                        
Query: 335  tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 394
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 939  tggctgttgaggtagagcgggaggagcgcgtcgaggatctggacggggtcctgctcgaac 880

                                                                        
Query: 395  tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 454
            || || ||||| |||||||||||| |||||||||| | |||||| ||||||||||| |||
Sbjct: 879  tgcaccacgggtgagaagggctgcgtctcgatcttcaccttctcccgctccacggtcagc 820

                                 
Query: 455  ttgccttccttggtggtgagc 475
            || ||||||||||||||||||
Sbjct: 819  ttcccttccttggtggtgagc 799
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  422 bits (213), Expect = e-115
 Identities = 294/321 (91%)
 Strand = Plus / Plus

                                                                            
Query: 155      agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 214
                |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||  ||
Sbjct: 19602762 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 19602821

                                                                            
Query: 215      cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 274
                || ||||||||||||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 19602822 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 19602881

                                                                            
Query: 275      atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 334
                ||||||||||||||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 19602882 atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 19602941

                                                                            
Query: 335      tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 394
                |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 19602942 tggctgttgaggtagagcgggaggagcgcgtcgaggatctggacggggtcctgctcgaac 19603001

                                                                            
Query: 395      tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 454
                || || ||||| |||||||||||| |||||||||| | |||||| ||||||||||| |||
Sbjct: 19603002 tgcaccacgggtgagaagggctgcgtctcgatcttcaccttctcccgctccacggtcagc 19603061

                                     
Query: 455      ttgccttccttggtggtgagc 475
                || ||||||||||||||||||
Sbjct: 19603062 ttcccttccttggtggtgagc 19603082
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>dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0580A11
          Length = 174673

 Score =  422 bits (213), Expect = e-115
 Identities = 294/321 (91%)
 Strand = Plus / Plus

                                                                          
Query: 155    agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 214
              |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||  ||
Sbjct: 146106 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 146165

                                                                          
Query: 215    cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 274
              || ||||||||||||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 146166 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 146225

                                                                          
Query: 275    atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 334
              ||||||||||||||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 146226 atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 146285

                                                                          
Query: 335    tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 394
              |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 146286 tggctgttgaggtagagcgggaggagcgcgtcgaggatctggacggggtcctgctcgaac 146345

                                                                          
Query: 395    tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 454
              || || ||||| |||||||||||| |||||||||| | |||||| ||||||||||| |||
Sbjct: 146346 tgcaccacgggtgagaagggctgcgtctcgatcttcaccttctcccgctccacggtcagc 146405

                                   
Query: 455    ttgccttccttggtggtgagc 475
              || ||||||||||||||||||
Sbjct: 146406 ttcccttccttggtggtgagc 146426
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>dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0041J06
          Length = 138157

 Score =  422 bits (213), Expect = e-115
 Identities = 294/321 (91%)
 Strand = Plus / Plus

                                                                         
Query: 155   agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 214
             |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||  ||
Sbjct: 41412 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 41471

                                                                         
Query: 215   cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 274
             || ||||||||||||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 41472 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 41531

                                                                         
Query: 275   atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 334
             ||||||||||||||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 41532 atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 41591

                                                                         
Query: 335   tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 394
             |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 41592 tggctgttgaggtagagcgggaggagcgcgtcgaggatctggacggggtcctgctcgaac 41651

                                                                         
Query: 395   tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 454
             || || ||||| |||||||||||| |||||||||| | |||||| ||||||||||| |||
Sbjct: 41652 tgcaccacgggtgagaagggctgcgtctcgatcttcaccttctcccgctccacggtcagc 41711

                                  
Query: 455   ttgccttccttggtggtgagc 475
             || ||||||||||||||||||
Sbjct: 41712 ttcccttccttggtggtgagc 41732
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>dbj|AK072104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116B21, full
            insert sequence
          Length = 1470

 Score =  422 bits (213), Expect = e-115
 Identities = 294/321 (91%)
 Strand = Plus / Minus

                                                                        
Query: 155  agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 214
            |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||  ||
Sbjct: 1119 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 1060

                                                                        
Query: 215  cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 274
            || ||||||||||||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 1059 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 1000

                                                                        
Query: 275  atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 334
            ||||||||||||||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 999  atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 940

                                                                        
Query: 335  tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 394
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 939  tggctgttgaggtagagcgggaggagcgcgtcgaggatctggacggggtcctgctcgaac 880

                                                                        
Query: 395  tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 454
            || || ||||| |||||||||||| |||||||||| | |||||| ||||||||||| |||
Sbjct: 879  tgcaccacgggtgagaagggctgcgtctcgatcttcaccttctcccgctccacggtcagc 820

                                 
Query: 455  ttgccttccttggtggtgagc 475
            || ||||||||||||||||||
Sbjct: 819  ttcccttccttggtggtgagc 799
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>dbj|AK105071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C11, full
            insert sequence
          Length = 2822

 Score =  414 bits (209), Expect = e-112
 Identities = 293/321 (91%)
 Strand = Plus / Minus

                                                                        
Query: 155  agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 214
            |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||  ||
Sbjct: 2584 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 2525

                                                                        
Query: 215  cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 274
            || ||||||||||||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 2524 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 2465

                                                                        
Query: 275  atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 334
            ||||||||||||||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 2464 atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 2405

                                                                        
Query: 335  tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 394
            |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 2404 tggctgttgaggtagagcgggaggagcgcgtcggggatctggacggggtcctgctcgaac 2345

                                                                        
Query: 395  tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 454
            || || ||||| |||||||||||| |||||||||| | |||||| ||||||||||| |||
Sbjct: 2344 tgcaccacgggtgagaagggctgcgtctcgatcttcaccttctcccgctccacggtcagc 2285

                                 
Query: 455  ttgccttccttggtggtgagc 475
            || ||||||||||||||||||
Sbjct: 2284 ttcccttccttggtggtgagc 2264
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>dbj|AK064835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F20, full
            insert sequence
          Length = 1482

 Score =  414 bits (209), Expect = e-112
 Identities = 293/321 (91%)
 Strand = Plus / Minus

                                                                        
Query: 155  agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 214
            |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||  ||
Sbjct: 1224 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 1165

                                                                        
Query: 215  cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 274
            || ||||||||||||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 1164 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 1105

                                                                        
Query: 275  atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 334
            ||||||||||||||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 1104 atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 1045

                                                                        
Query: 335  tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 394
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1044 tggctgttgaggtagagcgggaggagcgcgtcgaggatctggacggggtcctgctcgaac 985

                                                                        
Query: 395  tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 454
            || || ||||| |||||||||||| |||||||||| | |||||| ||| ||||||| |||
Sbjct: 984  tgcaccacgggtgagaagggctgcgtctcgatcttcaccttctcccgccccacggtcagc 925

                                 
Query: 455  ttgccttccttggtggtgagc 475
            || ||||||||||||||||||
Sbjct: 924  ttcccttccttggtggtgagc 904
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>gb|AY108268.1| Zea mays PCO078526 mRNA sequence
          Length = 1437

 Score =  381 bits (192), Expect = e-102
 Identities = 288/320 (90%)
 Strand = Plus / Minus

                                                                        
Query: 155  agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 214
            ||||||||||| || ||||||||||| |||||||| ||||||||||||||||||||  | 
Sbjct: 1168 agggcgtcggcaccggcgacgatctcgaggatctccccggtgatcttggcctggcgctgt 1109

                                                                        
Query: 215  cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 274
            || |||||| | |||||||| || || ||||| |||||||| ||||| ||||||||||||
Sbjct: 1108 cggttgtaggcgatggagaggttcttgcggagctcgatggcgttgtcggtggcgctgctc 1049

                                                                        
Query: 275  atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 334
            ||||||||||||| ||| ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 1048 atggcgctcatccgggcggcgagctcgctggcgagcgactcctgcagggcacggaggatc 989

                                                                        
Query: 335  tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 394
            ||||||||||||||||||||||| || ||||| |||||||| ||||||||||||||||||
Sbjct: 988  tggctgttgaggtagagcgggagcagcgcgtccaggatctgcacggggtcctgctcgaac 929

                                                                        
Query: 395  tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 454
            || || |||||||||||||||||| |||||||||| | ||||||||||||||||||||||
Sbjct: 928  tgcaccacgggggagaagggctgcgtctcgatcttcaccttctcgcgctccacggtgagc 869

                                
Query: 455  ttgccttccttggtggtgag 474
            || || ||||||||||||||
Sbjct: 868  ttcccctccttggtggtgag 849
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>emb|X70650.1|OSATPASE O.sinensis mRNA for gamma subunit of plastid ATPase
          Length = 1327

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 311 gactcctggagggcacgcaggatctggctgttgaggtagagcgggaggagagcgtcgagg 370
           ||||||||||| |  || |||||||||| |||||||||||| |||||||  | || || |
Sbjct: 975 gactcctggagcgtgcggaggatctggccgttgaggtagagggggaggatggagttgatg 916

                                  
Query: 371 atctggacggggtcctgctcgaa 393
           ||||||| |||||||||||||||
Sbjct: 915 atctggatggggtcctgctcgaa 893
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>gb|AY826836.1| Isochrysis galbana clone ISATPG1 chloroplast ATP synthase gamma
           subunit mRNA, partial cds; nuclear gene for chloroplast
           product
          Length = 900

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 329 aggatctggctgttgaggtagagcgggagga 359
           |||||||||| ||||||||||||||||||||
Sbjct: 885 aggatctggccgttgaggtagagcgggagga 855
to top
>gb|J04219.1|CREATPS C.reinhardtii chloroplast ATP synthase gamma subunit mRNA, complete
           cds
          Length = 1772

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 432 tcttctcgcgctccacggtgagcttgccttccttggtggtgagcttgaa 480
           |||||||||||||||||| || || |||  |||||||||| ||||||||
Sbjct: 816 tcttctcgcgctccacggcgaactcgccgcccttggtggtcagcttgaa 768



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 362 gcgtcgaggatctggacggggtcctgctcgaa 393
           ||||| ||||||||| |||| |||||||||||
Sbjct: 886 gcgtccaggatctgggcgggctcctgctcgaa 855
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>gb|M73493.1|CREATPC Chlamydomonas reinhardtii ATP synthase (CF1) gamma subunit gene,
            complete CDS
          Length = 2913

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 432  tcttctcgcgctccacggtgagcttgccttccttggtggtgagcttgaa 480
            |||||||||||||||||| || || |||  |||||||||| ||||||||
Sbjct: 2029 tcttctcgcgctccacggcgaactcgccgcccttggtggtcagcttgaa 1981



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 362  gcgtcgaggatctggacggggtcctgctcgaa 393
            ||||| ||||||||| |||| |||||||||||
Sbjct: 2099 gcgtccaggatctgggcgggctcctgctcgaa 2068
to top
>gb|AC087888.12| Homo sapiens 12 BAC RP11-228G3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 87788

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 95    aaggaggcaaagagttatatataa 118
             ||||||||||||||||||||||||
Sbjct: 75558 aaggaggcaaagagttatatataa 75535
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>gb|AC114785.5| Homo sapiens BAC clone RP11-607G14 from 2, complete sequence
          Length = 118022

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 45   tacaaacacagacacagaccaa 66
            ||||||||||||||||||||||
Sbjct: 7121 tacaaacacagacacagaccaa 7142
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>gb|U88181.1| Caenorhabditis elegans cosmid C55B6, complete sequence
          Length = 25003

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    tgagaaattattacaaacaca 54
             |||||||||||||||||||||
Sbjct: 19896 tgagaaattattacaaacaca 19876
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>gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088M05,
              complete sequence
          Length = 153368

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 81     agaagagaggagaaaaggagg 101
              |||||||||||||||||||||
Sbjct: 140157 agaagagaggagaaaaggagg 140177
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>gb|AC129330.4| Mus musculus BAC clone RP23-61B8 from chromosome 8, complete sequence
          Length = 218698

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 81    agaagagaggagaaaaggagg 101
             |||||||||||||||||||||
Sbjct: 15174 agaagagaggagaaaaggagg 15194
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>gb|AC125536.3| Mus musculus BAC clone RP24-142N21 from chromosome 8, complete
            sequence
          Length = 199356

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 81   agaagagaggagaaaaggagg 101
            |||||||||||||||||||||
Sbjct: 3705 agaagagaggagaaaaggagg 3685
to top
>emb|AL158817.11| Human DNA sequence from clone RP3-429O6 on chromosome 6 Contains part
             of a novel gene and a CpG island, complete sequence
          Length = 120529

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 84    agagaggagaaaaggaggcaaagag 108
             |||||||||||||||||| ||||||
Sbjct: 57721 agagaggagaaaaggaggaaaagag 57697
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>gb|AY267622.1| Bigelowiella natans ATP synthase gamma subunit mRNA, complete cds;
            nuclear gene for plastid product
          Length = 1351

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 158  gcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcg 210
            ||||| || ||||||||||||||||| || ||   ||||||||| ||||||||
Sbjct: 1174 gcgtctgcaccagcgacgatctcaagaatttcattggtgatcttagcctggcg 1122
to top
>gb|AC068298.16| Homo sapiens 3 BAC RP11-496B10 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 180335

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 85   gagaggagaaaaggaggcaaa 105
            |||||||||||||||||||||
Sbjct: 8264 gagaggagaaaaggaggcaaa 8244
to top
>gb|DQ122880.1| Chlamydomonas incerta chloroplast ATP synthase gamma subunit (AtpC)
           mRNA, partial cds; nuclear gene for chloroplast product
          Length = 696

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 432 tcttctcgcgctccacggtgagcttgccttccttggtggtgagcttgaa 480
           |||||||||||||||||| || |  |||  |||||||||| ||||||||
Sbjct: 463 tcttctcgcgctccacggcgaacgcgccgcccttggtggtcagcttgaa 415



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 362 gcgtcgaggatctggacggggtcctgctcgaa 393
           ||||| ||||||||| |||| |||||||||||
Sbjct: 533 gcgtccaggatctgggcgggctcctgctcgaa 502
to top
>gb|AC118139.3| Homo sapiens BAC clone RP11-461K12 from 4, complete sequence
          Length = 54171

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 81  agaagagaggagaaaaggagg 101
           |||||||||||||||||||||
Sbjct: 459 agaagagaggagaaaaggagg 479
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>gb|AC107365.2| Danio rerio, clone -241I7, complete sequence
          Length = 128411

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 81     agaagagaggagaaaaggagg 101
              |||||||||||||||||||||
Sbjct: 127553 agaagagaggagaaaaggagg 127533
to top
>gb|DQ337864.1| Uncultured bacterium clone Psedi_nirS-31 NirS (nirS) gene, partial
           cds
          Length = 410

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 447 cggtgagcttgccttccttgg 467
           |||||||||||||||||||||
Sbjct: 193 cggtgagcttgccttccttgg 173
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 81       agaagagaggagaaaaggagg 101
                |||||||||||||||||||||
Sbjct: 18346945 agaagagaggagaaaaggagg 18346965
to top
>gb|AF088219.1|AF088219 Homo sapiens CC chemokine gene cluster, complete sequence
          Length = 180919

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 71    gataagtactagaagagagga 91
             |||||||||||||||||||||
Sbjct: 90350 gataagtactagaagagagga 90330
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>emb|CR382300.12| Zebrafish DNA sequence from clone DKEY-25E11 in linkage group 19,
             complete sequence
          Length = 202006

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 81    agaagagaggagaaaaggagg 101
             |||||||||||||||||||||
Sbjct: 35716 agaagagaggagaaaaggagg 35736
to top
>gb|AC006572.2|AC006572 Homo sapiens, clone hRPK.60_A_1, complete sequence
          Length = 179691

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 81     agaagagaggagaaaaggagg 101
              |||||||||||||||||||||
Sbjct: 178150 agaagagaggagaaaaggagg 178170
to top
>gb|AC004675.1|AC004675 Homo sapiens chromosome 17, clone hCIT.186_H_2, complete sequence
          Length = 128501

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 71    gataagtactagaagagagga 91
             |||||||||||||||||||||
Sbjct: 88143 gataagtactagaagagagga 88163
to top
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 447     cggtgagcttgccttccttggtgg 470
               |||||| |||||||||||||||||
Sbjct: 2544786 cggtgatcttgccttccttggtgg 2544809
to top
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 267     cgctgctcatggcgctcatc 286
               ||||||||||||||||||||
Sbjct: 2764884 cgctgctcatggcgctcatc 2764903
to top
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 420     tctcgatcttgatcttctcg 439
               ||||||||||||||||||||
Sbjct: 2806038 tctcgatcttgatcttctcg 2806057
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 420     tctcgatcttgatcttctcg 439
               ||||||||||||||||||||
Sbjct: 2294556 tctcgatcttgatcttctcg 2294537
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 420     tctcgatcttgatcttctcg 439
               ||||||||||||||||||||
Sbjct: 1366988 tctcgatcttgatcttctcg 1366969
to top
>gb|AC122903.4| Mus musculus BAC clone RP23-44N5 from chromosome 1, complete sequence
          Length = 169832

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     ttacaaacacagacacagac 63
              ||||||||||||||||||||
Sbjct: 134653 ttacaaacacagacacagac 134672
to top
>gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 6
              through 10 and partial cds
          Length = 688489

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     tacaaacacagacacagacc 64
              ||||||||||||||||||||
Sbjct: 401220 tacaaacacagacacagacc 401239
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>emb|Z81119.1|CET10H4 Caenorhabditis elegans Cosmid T10H4, complete sequence
          Length = 33319

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    agaaattattacaaacacag 55
             ||||||||||||||||||||
Sbjct: 12793 agaaattattacaaacacag 12812
to top
>gb|AC126686.3| Mus musculus BAC clone RP23-148C24 from 18, complete sequence
          Length = 232817

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    aggagaaaaggaggcaaaga 107
             ||||||||||||||||||||
Sbjct: 78802 aggagaaaaggaggcaaaga 78783
to top
>gb|AC118351.14| Rattus norvegicus 1 BAC CH230-362O18 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 143705

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     ggagaaaaggaggcaaagag 108
              ||||||||||||||||||||
Sbjct: 125135 ggagaaaaggaggcaaagag 125116
to top
>emb|AL365214.16| Human DNA sequence from clone RP11-506B6 on chromosome 6 Contains a fem-1
              homolog a (C. elegans) (FEM1A) pseudogene, a keratin 18
              (KRT18) pseudogene, a laminin receptor 1 (67kD, ribosomal
              protein SA) (LAMR1)(RPSA) pseudogene, a hepatocellular
              carcinoma-related putative tumor suppressor (LPTS)
              pseudogene and the 3' end of a novel gene, complete
              sequence
          Length = 210107

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     tactagaagagaggagaaaa 96
              ||||||||||||||||||||
Sbjct: 191747 tactagaagagaggagaaaa 191728
to top
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 420     tctcgatcttgatcttctcg 439
               ||||||||||||||||||||
Sbjct: 1245988 tctcgatcttgatcttctcg 1245969



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 154     cagggcgtcggcgccagcga 173
               ||||||||||||||||||||
Sbjct: 1196169 cagggcgtcggcgccagcga 1196188
to top
>gb|AC154570.2| Mus musculus BAC clone RP23-385M5 from chromosome 14, complete sequence
          Length = 209218

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     tacaaacacagacacagacc 64
              ||||||||||||||||||||
Sbjct: 108436 tacaaacacagacacagacc 108417
to top
>gb|AC006454.4| Homo sapiens PAC clone RP5-852P6 from 7, complete sequence
          Length = 153203

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   gcagctcagcccagggagga 143
             ||||||||||||||||||||
Sbjct: 13876 gcagctcagcccagggagga 13857
to top
>emb|BX927151.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete
              genome; segment 4/10
          Length = 349459

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 419    atctcgatcttgatcttctc 438
              ||||||||||||||||||||
Sbjct: 184390 atctcgatcttgatcttctc 184409
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 420     tctcgatcttgatcttctcg 439
               ||||||||||||||||||||
Sbjct: 1238910 tctcgatcttgatcttctcg 1238891
to top
>emb|AL929280.6| Mouse DNA sequence from clone RP23-67M20 on chromosome 11 Contains a
              novel gene (2810471M01Rik), the 5' end of the gene for a
              novel protein (E030025D05Rik) and a CpG island, complete
              sequence
          Length = 216627

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     acacagacacagaccaagca 69
              ||||||||||||||||||||
Sbjct: 113992 acacagacacagaccaagca 113973
to top
>emb|AL663060.6| Mouse DNA sequence from clone RP23-239H6 on chromosome 11, complete
             sequence
          Length = 218635

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    acacagaccaagcaagataa 75
             ||||||||||||||||||||
Sbjct: 54294 acacagaccaagcaagataa 54275
to top
>gb|AC011193.3| Homo sapiens chromosome 17, clone RP11-521P1, complete sequence
          Length = 181022

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    gaagagaggagaaaaggagg 101
             ||||||||||||||||||||
Sbjct: 27254 gaagagaggagaaaaggagg 27235
to top
>gb|AC073761.4| Mus musculus chromosome 17 clone RP23-33K21, complete sequence
          Length = 206801

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 86   agaggagaaaaggaggcaaagagt 109
            ||||||||||||||| ||||||||
Sbjct: 3628 agaggagaaaaggagtcaaagagt 3605
to top
>gb|AC092745.7| Homo sapiens 12 BAC RP11-90D4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 152599

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   ctcatggcgctcatcctggc 291
             ||||||||||||||||||||
Sbjct: 39643 ctcatggcgctcatcctggc 39624
to top
>gb|AC092111.9| Homo sapiens 12 BAC RP11-266K4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 138313

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 272    ctcatggcgctcatcctggc 291
              ||||||||||||||||||||
Sbjct: 114733 ctcatggcgctcatcctggc 114714
to top
>dbj|AB232920.1| Oryzias latipes hox gene cluster, complete cds, contains hoxBa, evx
             homologue on hoxBa
          Length = 235883

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    agaagagaggagaaaaggag 100
             ||||||||||||||||||||
Sbjct: 76918 agaagagaggagaaaaggag 76937
to top
>gb|AC175781.3| Cavia porcellus clone CH234-402D11, complete sequence
          Length = 183894

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    gaagagaggagaaaaggagg 101
             ||||||||||||||||||||
Sbjct: 48112 gaagagaggagaaaaggagg 48131
to top
>gb|DQ337883.1| Uncultured bacterium clone S1m_nirS-22 NirS (nirS) gene, partial
           cds
          Length = 410

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 448 ggtgagcttgccttccttgg 467
           ||||||||||||||||||||
Sbjct: 192 ggtgagcttgccttccttgg 173
to top
>gb|DQ337869.1| Uncultured bacterium clone Psedi_nirS-41 NirS (nirS) gene, partial
           cds
          Length = 413

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 450 tgagcttgccttccttggtg 469
           ||||||||||||||||||||
Sbjct: 190 tgagcttgccttccttggtg 171
to top
>gb|DQ337840.1| Uncultured bacterium clone P1m_nirS-15 NirS (nirS) gene, partial
           cds
          Length = 413

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 450 tgagcttgccttccttggtg 469
           ||||||||||||||||||||
Sbjct: 190 tgagcttgccttccttggtg 171
to top
>gb|AC122754.13| Mus musculus chromosome 1, clone RP24-510K10, complete sequence
          Length = 227950

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     gaaaaggaggcaaagagtta 111
              ||||||||||||||||||||
Sbjct: 105449 gaaaaggaggcaaagagtta 105468
to top
>gb|AC157870.3| Loxodonta africana clone VMRC15-210D1, complete sequence
          Length = 123158

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 453   gcttgccttccttggtggtg 472
             ||||||||||||||||||||
Sbjct: 49361 gcttgccttccttggtggtg 49342
to top
>dbj|AK051229.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
           enriched library, clone:D130019J16
           product:unclassifiable, full insert sequence
          Length = 2020

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 44  ttacaaacacagacacagac 63
           ||||||||||||||||||||
Sbjct: 511 ttacaaacacagacacagac 492
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>gb|AC012336.9|AC012336 Homo sapiens chromosome 17, clone CTD-2236G12, complete sequence
          Length = 40405

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    gaagagaggagaaaaggagg 101
             ||||||||||||||||||||
Sbjct: 10132 gaagagaggagaaaaggagg 10151
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>dbj|AK037782.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length
           enriched library, clone:A130049I01
           product:unclassifiable, full insert sequence
          Length = 1553

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 44  ttacaaacacagacacagac 63
           ||||||||||||||||||||
Sbjct: 649 ttacaaacacagacacagac 630
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>dbj|AK043901.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length
           enriched library, clone:A830048L15
           product:unclassifiable, full insert sequence
          Length = 1373

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 83  aagagaggagaaaaggaggcaaag 106
           |||||||||||| |||||||||||
Sbjct: 729 aagagaggagaagaggaggcaaag 706
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 45       tacaaacacagacacagacc 64
                ||||||||||||||||||||
Sbjct: 21304663 tacaaacacagacacagacc 21304682



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 16       acatccttttttgtgctatg 35
                ||||||||||||||||||||
Sbjct: 19087865 acatccttttttgtgctatg 19087846
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 79       ctagaagagaggagaaaagg 98
                ||||||||||||||||||||
Sbjct: 20600956 ctagaagagaggagaaaagg 20600937
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>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 419     atctcgatcttgatcttctc 438
               ||||||||||||||||||||
Sbjct: 1229205 atctcgatcttgatcttctc 1229224
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>gb|AC105916.4| Homo sapiens BAC clone RP11-180A12 from 4, complete sequence
          Length = 104269

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   ggcagctcagcccagggagg 142
             ||||||||||||||||||||
Sbjct: 81855 ggcagctcagcccagggagg 81874
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>emb|AL929073.19| Mouse DNA sequence from clone RP23-125D6 on chromosome 4, complete
             sequence
          Length = 129246

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    gaagagaggagaaaaggagg 101
             ||||||||||||||||||||
Sbjct: 16741 gaagagaggagaaaaggagg 16760
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>dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0656E03
          Length = 181786

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     tacaaacacagacacagacc 64
              ||||||||||||||||||||
Sbjct: 100039 tacaaacacagacacagacc 100058
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>dbj|AP004328.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1616_B03
          Length = 96081

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    acatccttttttgtgctatg 35
             ||||||||||||||||||||
Sbjct: 85349 acatccttttttgtgctatg 85330
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>dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0051E21
          Length = 137959

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    ctagaagagaggagaaaagg 98
             ||||||||||||||||||||
Sbjct: 96514 ctagaagagaggagaaaagg 96495
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>dbj|AK121910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105O17, full
           insert sequence
          Length = 1563

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  acatccttttttgtgctatg 35
           ||||||||||||||||||||
Sbjct: 859 acatccttttttgtgctatg 840
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>dbj|AK101846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069I17, full
           insert sequence
          Length = 3061

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  acatccttttttgtgctatg 35
           ||||||||||||||||||||
Sbjct: 865 acatccttttttgtgctatg 846
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 420     tctcgatcttgatcttctcg 439
               ||||||||||||||||||||
Sbjct: 1065662 tctcgatcttgatcttctcg 1065643
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>gb|AC154142.24| Mus musculus chromosome 1, clone RP23-187M7, complete sequence
          Length = 237824

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     gaaaaggaggcaaagagtta 111
              ||||||||||||||||||||
Sbjct: 188353 gaaaaggaggcaaagagtta 188372
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>emb|AL845291.5| Mouse DNA sequence from clone RP23-1O11 on chromosome 2, complete
              sequence
          Length = 209914

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 83     aagagaggagaaaaggaggcaaag 106
              |||||||||||| |||||||||||
Sbjct: 178379 aagagaggagaagaggaggcaaag 178356
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>dbj|AB032374.1| Mus musculus gene for Tbr1, 5' flanking region
          Length = 4570

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 83   aagagaggagaaaaggaggcaaag 106
            |||||||||||| |||||||||||
Sbjct: 3905 aagagaggagaagaggaggcaaag 3882
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>dbj|AB015309.1| Acidovorax sp. TP4 gene for PHB depolymerase, complete cds
          Length = 3846

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 263  gtggcgctgctcatggcgct 282
            ||||||||||||||||||||
Sbjct: 2294 gtggcgctgctcatggcgct 2313


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,379,375
Number of Sequences: 3902068
Number of extensions: 4379375
Number of successful extensions: 120573
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 119921
Number of HSP's gapped (non-prelim): 653
length of query: 480
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 458
effective length of database: 17,147,199,772
effective search space: 7853417495576
effective search space used: 7853417495576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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