Clone Name | rbah63m05 |
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Clone Library Name | barley_pub |
>CIGR2_ORYSA (Q8GVE1) Chitin-inducible gibberellin-responsive protein 2| Length = 544 Score = 222 bits (566), Expect = 4e-58 Identities = 107/116 (92%), Positives = 110/116 (94%) Frame = -3 Query: 534 AETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKA 355 AETLDYYTAIFESIDLTLPRDDRER+NMEQHCLARE+VNLIACEG ER ER+E FGKWKA Sbjct: 429 AETLDYYTAIFESIDLTLPRDDRERINMEQHCLAREIVNLIACEGEERAERYEPFGKWKA 488 Query: 354 RLTMAGFRPSPLSSLVNATISKLLQSYSDNYKLAERDGALYLGWKKRPLVVSSAWH 187 RLTMAGFRPSPLSSLVNATI LLQSYSDNYKLAERDGALYLGWK RPLVVSSAWH Sbjct: 489 RLTMAGFRPSPLSSLVNATIRTLLQSYSDNYKLAERDGALYLGWKSRPLVVSSAWH 544
>CIGR1_ORYSA (Q69VG1) Chitin-inducible gibberellin-responsive protein 1| Length = 571 Score = 173 bits (439), Expect = 2e-43 Identities = 76/115 (66%), Positives = 98/115 (85%) Frame = -3 Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKAR 352 ET++YY+A+FESID LPRD++ER+++EQHCLA+++VN+IACEG +RVERHE+ GKWK+R Sbjct: 457 ETMEYYSAMFESIDANLPRDNKERISVEQHCLAKDIVNIIACEGKDRVERHELLGKWKSR 516 Query: 351 LTMAGFRPSPLSSLVNATISKLLQSYSDNYKLAERDGALYLGWKKRPLVVSSAWH 187 LTMAGFRP PLSS VN+ I KLL YSD Y L E+DGA+ LGW+ R L+ +SAWH Sbjct: 517 LTMAGFRPYPLSSYVNSVIRKLLACYSDKYTLDEKDGAMLLGWRSRKLISASAWH 571
>RGL2_ARATH (Q8GXW1) DELLA protein RGL2 (RGA-like protein 2) (Scarecrow-like| protein 19) Length = 547 Score = 97.4 bits (241), Expect = 2e-20 Identities = 47/116 (40%), Positives = 74/116 (63%), Gaps = 2/116 (1%) Frame = -3 Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKAR 352 E L YY+++F+S++ + ++RV E + L R+++N++A EG++RVERHE +W+ R Sbjct: 430 EALHYYSSLFDSLEDSYSLPSQDRVMSEVY-LGRQILNVVAAEGSDRVERHETAAQWRIR 488 Query: 351 LTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGWKKRPLVVSSAW 190 + AGF P L S S LL Y+ D Y++ E DG L +GW+ RPL+ +SAW Sbjct: 489 MKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRVEENDGCLMIGWQTRPLITTSAW 544
>RGL1_ARATH (Q9C8Y3) DELLA protein RGL1 (RGA-like protein 1) (RGA-like protein)| Length = 511 Score = 96.7 bits (239), Expect = 4e-20 Identities = 48/116 (41%), Positives = 72/116 (62%), Gaps = 2/116 (1%) Frame = -3 Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKAR 352 E+L YY+++F+S++ P DR M + L R+++NL+ACEG +RVERHE +W+ R Sbjct: 394 ESLHYYSSLFDSLEGP-PSQDRV---MSELFLGRQILNLVACEGEDRVERHETLNQWRNR 449 Query: 351 LTMAGFRPSPLSSLVNATISKLLQSY--SDNYKLAERDGALYLGWKKRPLVVSSAW 190 + GF+P + S S LL Y +D Y + E +G L LGW+ RPL+ +SAW Sbjct: 450 FGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGCLLLGWQTRPLIATSAW 505
>GAIP_CUCMA (Q6EI06) DELLA protein GAIP (Gibberellic acid-insensitive phloem| protein) (GAIP) (CmGAIP) Length = 579 Score = 94.4 bits (233), Expect = 2e-19 Identities = 46/116 (39%), Positives = 72/116 (62%), Gaps = 2/116 (1%) Frame = -3 Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKAR 352 E+L YY+ +F+S++ + D+ M + L +++ N++ACEGA+RVERHE +W+ R Sbjct: 457 ESLHYYSTLFDSLECSPNSQDKM---MSEMYLGKQICNVVACEGADRVERHETLTQWRTR 513 Query: 351 LTMAGFRPSPLSS--LVNATISKLLQSYSDNYKLAERDGALYLGWKKRPLVVSSAW 190 L+ AGF P L S A+I L + Y++ E +G+L LGW RPL+ +SAW Sbjct: 514 LSSAGFDPIHLGSNAFKQASILLALFGSGEGYRVEENEGSLMLGWHTRPLIATSAW 569
>GAI1_VITVI (Q8S4W7) DELLA protein GAI1 (Gibberellic acid-insensitive mutant| protein 1) (VvGAI1) Length = 590 Score = 92.8 bits (229), Expect = 5e-19 Identities = 48/118 (40%), Positives = 74/118 (62%), Gaps = 4/118 (3%) Frame = -3 Query: 531 ETLDYYTAIFESIDL--TLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWK 358 E+L YY+ +F+S++ P + ++++ E + L +++ N++ACEG ERVERHE +W+ Sbjct: 458 ESLHYYSTLFDSLEGCGVSPVNTQDKLMSEVY-LGQQICNVVACEGPERVERHETLAQWR 516 Query: 357 ARLTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGWKKRPLVVSSAW 190 ARL AGF P L S S LL ++ D Y++ E +G L LGW RPL+ +SAW Sbjct: 517 ARLGSAGFDPVNLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAW 574
>RGL3_ARATH (Q9LF53) DELLA protein RGL3 (RGA-like protein 3)| Length = 523 Score = 92.4 bits (228), Expect = 7e-19 Identities = 45/118 (38%), Positives = 73/118 (61%), Gaps = 4/118 (3%) Frame = -3 Query: 531 ETLDYYTAIFESID--LTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWK 358 E L YY+++F+S++ + +P DR M + L R+++NL+A EG++R+ERHE +W+ Sbjct: 401 EALHYYSSLFDSLEDGVVIPSQDRV---MSEVYLGRQILNLVATEGSDRIERHETLAQWR 457 Query: 357 ARLTMAGFRPSPLSS--LVNATISKLLQSYSDNYKLAERDGALYLGWKKRPLVVSSAW 190 R+ AGF P L S A++ L D Y++ E DG+L L W+ +PL+ +SAW Sbjct: 458 KRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEENDGSLMLAWQTKPLIAASAW 515
>GAI_LYCES (Q7Y1B6) DELLA protein GAI (Gibberellic acid-insensitive mutant| protein) Length = 588 Score = 92.0 bits (227), Expect = 9e-19 Identities = 47/129 (36%), Positives = 72/129 (55%), Gaps = 15/129 (11%) Frame = -3 Query: 531 ETLDYYTAIFESID-------------LTLPRDDRERVNMEQHCLAREVVNLIACEGAER 391 E L YY+ +F+S++ L P + + + M + L R++ N++ACEG++R Sbjct: 445 EALHYYSTMFDSLESSGSSSSASPTGILPQPPVNNQDLVMSEVYLGRQICNVVACEGSDR 504 Query: 390 VERHEVFGKWKARLTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGWKK 217 VERHE +W+ R+ +GF P L S S LL ++ D Y++ E DG L LGW Sbjct: 505 VERHETLNQWRVRMNSSGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENDGCLMLGWHT 564 Query: 216 RPLVVSSAW 190 RPL+ +SAW Sbjct: 565 RPLIATSAW 573
>SLR1_ORYSA (Q7G7J6) DELLA protein SLR1 (Protein SLENDER RICE1) (Gibberellic| acid-insensitive mutant protein) (OsGAI) Length = 625 Score = 91.3 bits (225), Expect = 2e-18 Identities = 51/128 (39%), Positives = 75/128 (58%), Gaps = 14/128 (10%) Frame = -3 Query: 531 ETLDYYTAIFESID--------LTLPR----DDRERVNMEQHCLAREVVNLIACEGAERV 388 E+L YY+ +F+S++ L+ P ++V E + L R++ N++ACEGAER Sbjct: 494 ESLHYYSTMFDSLEGGSSGQAELSPPAAGGGGGTDQVMSEVY-LGRQICNVVACEGAERT 552 Query: 387 ERHEVFGKWKARLTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGWKKR 214 ERHE G+W+ RL AGF P L S S LL ++ D Y++ E++G L LGW R Sbjct: 553 ERHETLGQWRNRLGRAGFEPVHLGSNAYKQASTLLALFAGGDGYRVEEKEGCLTLGWHTR 612 Query: 213 PLVVSSAW 190 PL+ +SAW Sbjct: 613 PLIATSAW 620
>DWRF8_MAIZE (Q9ST48) DELLA protein DWARF8 (Protein dwarf-8)| Length = 630 Score = 90.9 bits (224), Expect = 2e-18 Identities = 49/127 (38%), Positives = 71/127 (55%), Gaps = 13/127 (10%) Frame = -3 Query: 531 ETLDYYTAIFESI-----------DLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVE 385 E+L YY+ +F+S+ D + M + L R++ N++ACEGAER E Sbjct: 496 ESLHYYSTMFDSLEGAGAGSGQSTDASPAAAGGTDQVMSEVYLGRQICNVVACEGAERTE 555 Query: 384 RHEVFGKWKARLTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGWKKRP 211 RHE G+W++RL +GF P L S S LL ++ D Y++ E+DG L LGW RP Sbjct: 556 RHETLGQWRSRLGGSGFAPVHLGSNAYKQASTLLALFAGGDGYRVEEKDGCLTLGWHTRP 615 Query: 210 LVVSSAW 190 L+ +SAW Sbjct: 616 LIATSAW 622
>GAIPB_CUCMA (Q6EI05) DELLA protein GAIP-B (Gibberellic acid-insensitive phloem| protein B) (GAIP-B) (CmGAIP-B) Length = 587 Score = 90.1 bits (222), Expect = 3e-18 Identities = 44/116 (37%), Positives = 71/116 (61%), Gaps = 2/116 (1%) Frame = -3 Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKAR 352 E+L YY+ +F+S++ + D+ M + L +++ N++ACEG++RVE HE +W+ R Sbjct: 464 ESLHYYSTLFDSLESSPNNQDKM---MSEMYLGKQICNVVACEGSDRVEWHETLTQWRTR 520 Query: 351 LTMAGFRPSPLSSLVNATISKLLQSY--SDNYKLAERDGALYLGWKKRPLVVSSAW 190 L +GF P L S S LL + + Y++ E +G+L LGW RPL+V+SAW Sbjct: 521 LCSSGFEPIHLGSNAFKQASMLLALFGSGEGYRVEENNGSLTLGWHTRPLIVTSAW 576
>RGA2_BRACM (Q5BN22) DELLA protein RGA2 (RGA-like protein 2) (BrRGA2)| Length = 579 Score = 88.6 bits (218), Expect = 1e-17 Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 2/116 (1%) Frame = -3 Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKAR 352 E+L YY+ +F+S++ D+ M + L +++ NL+ACEG +RVERHE +W R Sbjct: 461 ESLHYYSTLFDSLEGVPSSQDKV---MSEVYLGKQICNLVACEGPDRVERHETLSQWANR 517 Query: 351 LTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGWKKRPLVVSSAW 190 +GF P+ L S S LL ++ + Y++ E +G L LGW RPL+ +SAW Sbjct: 518 FGSSGFAPAHLGSNAFKQASMLLALFNGGEGYRVEENNGCLMLGWHTRPLITTSAW 573
>RHT1_WHEAT (Q9ST59) DELLA protein RHT-1 (Reduced height protein 1) (Protein| Rht-B1/Rht-D1) Length = 623 Score = 88.2 bits (217), Expect = 1e-17 Identities = 49/131 (37%), Positives = 70/131 (53%), Gaps = 17/131 (12%) Frame = -3 Query: 531 ETLDYYTAIFESIDLTLPRDDRERVN---------------MEQHCLAREVVNLIACEGA 397 E+L YY+ +F+S++ V+ M + L R++ N++ACEGA Sbjct: 488 ESLHYYSTMFDSLEGGSSGGGPSEVSSGAAAAPAAAGTDQVMSEVYLGRQICNVVACEGA 547 Query: 396 ERVERHEVFGKWKARLTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGW 223 ER ERHE G+W+ RL AGF L S S LL ++ D YK+ E++G L LGW Sbjct: 548 ERTERHETLGQWRNRLGNAGFETVHLGSNAYKQASTLLALFAGGDGYKVEEKEGCLTLGW 607 Query: 222 KKRPLVVSSAW 190 RPL+ +SAW Sbjct: 608 HTRPLIATSAW 618
>RGA1_BRACM (Q5BN23) DELLA protein RGA1 (RGA-like protein 1) (BrRGA1)| Length = 573 Score = 86.7 bits (213), Expect = 4e-17 Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 2/116 (1%) Frame = -3 Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKAR 352 E+L YY+ +F+S++ D+ M + L +++ NL+ACEG +RVERHE +W R Sbjct: 455 ESLHYYSTLFDSLEGAPSSQDKV---MSEVYLGKQICNLVACEGPDRVERHETLSQWSNR 511 Query: 351 LTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGWKKRPLVVSSAW 190 +GF P+ L S S LL ++ + Y++ E +G L L W RPL+ +SAW Sbjct: 512 FGSSGFAPAHLGSNAFKQASTLLALFNGGEGYRVEENNGCLMLSWHTRPLITTSAW 567
>GAI_ARATH (Q9LQT8) DELLA protein GAI (Gibberellic acid-insensitive mutant| protein) (Restoration of growth on ammonia protein 2) Length = 533 Score = 85.9 bits (211), Expect = 7e-17 Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 2/116 (1%) Frame = -3 Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKAR 352 E+L YY+ +F+S++ D+ M + L +++ N++AC+G +RVERHE +W+ R Sbjct: 416 ESLHYYSTLFDSLEGVPSGQDKV---MSEVYLGKQICNVVACDGPDRVERHETLSQWRNR 472 Query: 351 LTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGWKKRPLVVSSAW 190 AGF + + S S LL ++ + Y++ E DG L LGW RPL+ +SAW Sbjct: 473 FGSAGFAAAHIGSNAFKQASMLLALFNGGEGYRVEESDGCLMLGWHTRPLIATSAW 528
>SLN1_HORVU (Q8W127) DELLA protein SLN1 (Slender protein 1)| Length = 618 Score = 85.9 bits (211), Expect = 7e-17 Identities = 48/130 (36%), Positives = 69/130 (53%), Gaps = 16/130 (12%) Frame = -3 Query: 531 ETLDYYTAIFESIDLTLPRDDRERVN--------------MEQHCLAREVVNLIACEGAE 394 E+L YY+ +F+S++ E + M + L R++ N++ACEG E Sbjct: 484 ESLHYYSTMFDSLEGGSSGGPSEVSSGGAAPAAAAGTDQVMSEVYLGRQICNVVACEGTE 543 Query: 393 RVERHEVFGKWKARLTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGWK 220 R ERHE G+W+ RL AGF L S S LL ++ D YK+ E++G L LGW Sbjct: 544 RTERHETLGQWRNRLGNAGFETVHLGSNAYKQASTLLALFAGGDGYKVEEKEGCLTLGWH 603 Query: 219 KRPLVVSSAW 190 RPL+ +SAW Sbjct: 604 TRPLIATSAW 613
>RGA_ARATH (Q9SLH3) DELLA protein RGA (Repressor on the ga1-3 mutant)| (GAI-related sequence) (Restoration of growth on ammonia protein 1) Length = 587 Score = 84.7 bits (208), Expect = 1e-16 Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 2/116 (1%) Frame = -3 Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKAR 352 E+L YY+ +F+S++ D+ M + L +++ NL+ACEG +RVERHE +W R Sbjct: 468 ESLHYYSTLFDSLEGVPNSQDKV---MSEVYLGKQICNLVACEGPDRVERHETLSQWGNR 524 Query: 351 LTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGWKKRPLVVSSAW 190 +G P+ L S S LL ++ Y++ E +G L LGW RPL+ +SAW Sbjct: 525 FGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVEESNGCLMLGWHTRPLITTSAW 580
>GAI_GOSHI (Q84TQ7) DELLA protein GAI (Gibberellic acid-insensitive mutant| protein) (GhGAI) Length = 537 Score = 82.0 bits (201), Expect = 9e-16 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%) Frame = -3 Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKAR 352 E L YY+ +F+S++ + + + M + L R++ N++ACEG +RVERHE +W+ R Sbjct: 417 EALHYYSTLFDSLEGSGVAPASQDLAMSELYLGRQICNVVACEGMDRVERHEPLTQWRTR 476 Query: 351 LTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGWKKRPLV 205 + AG P L S S LL ++ D Y++ E +G L LGW RPL+ Sbjct: 477 METAGVSPVHLGSNAYKQASMLLALFASGDGYRVEENNGCLMLGWHTRPLI 527
>MOC_ORYSA (Q84MM9) Protein MONOCULM 1| Length = 441 Score = 72.0 bits (175), Expect = 1e-12 Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 2/114 (1%) Frame = -3 Query: 525 LDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKARLT 346 +D+Y+A+FE+++ T+P RER+ +EQ L RE+ + G E +W Sbjct: 326 MDHYSAVFEALEATVPPGSRERLAVEQEVLGREIEAAVGPSGGRWWRGIE---RWGGAAR 382 Query: 345 MAGFRPSPLSSLVNATISKLLQSY--SDNYKLAERDGALYLGWKKRPLVVSSAW 190 AGF PLS+ + LL+ + S+ Y + E GA +LGW+ RPL+ SAW Sbjct: 383 AAGFAARPLSAFAVSQARLLLRLHYPSEGYLVQEARGACFLGWQTRPLLSVSAW 436
>NSP2_MEDTR (Q5NE24) Nodulation signaling pathway 2 protein| Length = 508 Score = 47.4 bits (111), Expect = 3e-05 Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 6/120 (5%) Frame = -3 Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREV---VNLIACEGAERVERHEVFGKW 361 ++L +Y+A+F+S++ P +R R +E+ + + I G E E +G+W Sbjct: 385 DSLHHYSAVFDSLEAGFPMQNRARTLVERVFFGPRIAGSLGRIYRTGGE--EERRSWGEW 442 Query: 360 KARLTMAGFRPSPLSSLVNATISKLLQSYSDNYKLAE---RDGALYLGWKKRPLVVSSAW 190 L GFR P+S + LL ++D Y++ E L L WK R L+ +S W Sbjct: 443 ---LGEVGFRGVPVSFANHCQAKLLLGLFNDGYRVEEVGVGSNKLVLDWKSRRLLSASLW 499
>POLR_ELV (P35928) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1748 Score = 34.7 bits (78), Expect = 0.17 Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 5/45 (11%) Frame = -3 Query: 315 SLVNATISKLL-----QSYSDNYKLAERDGALYLGWKKRPLVVSS 196 S VNA + K L QS DNY L + LGWK+RPL++ S Sbjct: 512 SSVNALLRKFLGPNSPQSNLDNYNLHLHPESFTLGWKRRPLLLDS 556
>NSP1_MEDTR (Q4VYC8) Nodulation signaling pathway 1 protein| Length = 554 Score = 32.7 bits (73), Expect = 0.66 Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 2/98 (2%) Frame = -3 Query: 477 RDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKARLTMAGFRPSPLSSLVNAT 298 RD ER ME A+ + N E ER E KW R+ AGF Sbjct: 459 RDSDERKMMEGEA-AKALTNQ-----REMNERRE---KWCERMKEAGFAGEVFGEDAIDG 509 Query: 297 ISKLLQSYSDNY--KLAERDGALYLGWKKRPLVVSSAW 190 LL+ Y +N+ K+ E ++ L WK +P+ S W Sbjct: 510 GRALLRKYDNNWEMKVEENSTSVELWWKSQPVSFCSLW 547
>GRPE_XANCP (Q8PAL0) Protein grpE (HSP-70 cofactor)| Length = 172 Score = 32.0 bits (71), Expect = 1.1 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Frame = -3 Query: 468 RERVNMEQHC--LAREVVNLIACEGAERV-ERHEVFGKWKARLTMAGFRPSPLSSLVNAT 298 RER ++E +AR+V N + + E VF A LT AG PSPL ++ T Sbjct: 43 RERADLENQRKRIARDVENARKFANEKLLGELLPVFDSLDAGLTAAGTEPSPLRDGLDLT 102 Query: 297 ISKLLQSYSDN 265 +LL+ +DN Sbjct: 103 YKQLLKVAADN 113
>GRPE_XANAC (Q8PMB1) Protein grpE (HSP-70 cofactor)| Length = 172 Score = 32.0 bits (71), Expect = 1.1 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Frame = -3 Query: 468 RERVNMEQHC--LAREVVNLIACEGAERV-ERHEVFGKWKARLTMAGFRPSPLSSLVNAT 298 RER ++E +AR+V N + + E VF A LT AG PSPL ++ T Sbjct: 43 RERADLENQRKRIARDVENARKFANEKLLGELLPVFDSLDAGLTAAGTEPSPLRDGLDMT 102 Query: 297 ISKLLQSYSDN 265 +LL+ +DN Sbjct: 103 YKQLLKVAADN 113
>WNT8B_MOUSE (Q9WUD6) Protein Wnt-8b precursor| Length = 350 Score = 30.4 bits (67), Expect = 3.3 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%) Frame = -3 Query: 468 RERVNMEQ---HCLAREVVNLIACEGAERVERHEVFGKWKAR 352 RE V++E +CL + + L+ EG E + R G+W+ R Sbjct: 243 RELVHLEDSPDYCLENKTLGLLGTEGRECLRRGRALGRWERR 284
>WNT8B_HUMAN (Q93098) Protein Wnt-8b precursor| Length = 351 Score = 30.4 bits (67), Expect = 3.3 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%) Frame = -3 Query: 468 RERVNMEQ---HCLAREVVNLIACEGAERVERHEVFGKWKAR 352 RE V++E +CL + + L+ EG E + R G+W+ R Sbjct: 244 RELVHLEDSPDYCLENKTLGLLGTEGRECLRRGRALGRWERR 285
>WISP3_HUMAN (O95389) WNT1-inducible signaling pathway protein 3 precursor| (WISP-3) Length = 354 Score = 30.0 bits (66), Expect = 4.3 Identities = 17/51 (33%), Positives = 25/51 (49%) Frame = -3 Query: 342 AGFRPSPLSSLVNATISKLLQSYSDNYKLAERDGALYLGWKKRPLVVSSAW 190 +G + S N ++ LLQ S +YK L L WKK+ LV ++ W Sbjct: 166 SGAKGGKKSDQSNCSLEPLLQQLSTSYKTMPAYRNLPLIWKKKCLVQATKW 216
>COAT_RCNMV (P22955) Coat protein (Capsid protein)| Length = 339 Score = 30.0 bits (66), Expect = 4.3 Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 5/81 (6%) Frame = -3 Query: 513 TAIFESIDLTLPRDDRERVNMEQHCLAREVVN-----LIACEGAERVERHEVFGKWKARL 349 TA++E LT+P D++ R + + R++V+ + G++ +E ++F + Sbjct: 148 TAVYEKCSLTIPADNQWRFVADNTTVDRKLVDFGQLLFVTHSGSDGIETGDIFLDCEVEF 207 Query: 348 TMAGFRPSPLSSLVNATISKL 286 P P +S+V T+ L Sbjct: 208 K----GPQPTASIVQKTVIDL 224
>TOP1_METJA (Q59046) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| (Omega-protein) (Relaxing enzyme) (Untwisting enzyme) (Swivelase) Length = 761 Score = 29.3 bits (64), Expect = 7.3 Identities = 15/68 (22%), Positives = 34/68 (50%) Frame = -3 Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKAR 352 ET + ++E+ ++ PR +++ ++ L +++N+I + H V+GKW R Sbjct: 299 ETQEIAQKLYENALISYPRTSSQKLPKDRKYL-EDILNII--------KNHPVYGKWAER 349 Query: 351 LTMAGFRP 328 + +P Sbjct: 350 ILKENLKP 357 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,185,278 Number of Sequences: 219361 Number of extensions: 850992 Number of successful extensions: 2562 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 2479 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2528 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4200495993 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)