ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63m05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CIGR2_ORYSA (Q8GVE1) Chitin-inducible gibberellin-responsive pro... 222 4e-58
2CIGR1_ORYSA (Q69VG1) Chitin-inducible gibberellin-responsive pro... 173 2e-43
3RGL2_ARATH (Q8GXW1) DELLA protein RGL2 (RGA-like protein 2) (Sca... 97 2e-20
4RGL1_ARATH (Q9C8Y3) DELLA protein RGL1 (RGA-like protein 1) (RGA... 97 4e-20
5GAIP_CUCMA (Q6EI06) DELLA protein GAIP (Gibberellic acid-insensi... 94 2e-19
6GAI1_VITVI (Q8S4W7) DELLA protein GAI1 (Gibberellic acid-insensi... 93 5e-19
7RGL3_ARATH (Q9LF53) DELLA protein RGL3 (RGA-like protein 3) 92 7e-19
8GAI_LYCES (Q7Y1B6) DELLA protein GAI (Gibberellic acid-insensiti... 92 9e-19
9SLR1_ORYSA (Q7G7J6) DELLA protein SLR1 (Protein SLENDER RICE1) (... 91 2e-18
10DWRF8_MAIZE (Q9ST48) DELLA protein DWARF8 (Protein dwarf-8) 91 2e-18
11GAIPB_CUCMA (Q6EI05) DELLA protein GAIP-B (Gibberellic acid-inse... 90 3e-18
12RGA2_BRACM (Q5BN22) DELLA protein RGA2 (RGA-like protein 2) (BrR... 89 1e-17
13RHT1_WHEAT (Q9ST59) DELLA protein RHT-1 (Reduced height protein ... 88 1e-17
14RGA1_BRACM (Q5BN23) DELLA protein RGA1 (RGA-like protein 1) (BrR... 87 4e-17
15GAI_ARATH (Q9LQT8) DELLA protein GAI (Gibberellic acid-insensiti... 86 7e-17
16SLN1_HORVU (Q8W127) DELLA protein SLN1 (Slender protein 1) 86 7e-17
17RGA_ARATH (Q9SLH3) DELLA protein RGA (Repressor on the ga1-3 mut... 85 1e-16
18GAI_GOSHI (Q84TQ7) DELLA protein GAI (Gibberellic acid-insensiti... 82 9e-16
19MOC_ORYSA (Q84MM9) Protein MONOCULM 1 72 1e-12
20NSP2_MEDTR (Q5NE24) Nodulation signaling pathway 2 protein 47 3e-05
21POLR_ELV (P35928) RNA replicase polyprotein (EC 2.7.7.48) 35 0.17
22NSP1_MEDTR (Q4VYC8) Nodulation signaling pathway 1 protein 33 0.66
23GRPE_XANCP (Q8PAL0) Protein grpE (HSP-70 cofactor) 32 1.1
24GRPE_XANAC (Q8PMB1) Protein grpE (HSP-70 cofactor) 32 1.1
25WNT8B_MOUSE (Q9WUD6) Protein Wnt-8b precursor 30 3.3
26WNT8B_HUMAN (Q93098) Protein Wnt-8b precursor 30 3.3
27WISP3_HUMAN (O95389) WNT1-inducible signaling pathway protein 3 ... 30 4.3
28COAT_RCNMV (P22955) Coat protein (Capsid protein) 30 4.3
29TOP1_METJA (Q59046) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoi... 29 7.3

>CIGR2_ORYSA (Q8GVE1) Chitin-inducible gibberellin-responsive protein 2|
          Length = 544

 Score =  222 bits (566), Expect = 4e-58
 Identities = 107/116 (92%), Positives = 110/116 (94%)
 Frame = -3

Query: 534 AETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKA 355
           AETLDYYTAIFESIDLTLPRDDRER+NMEQHCLARE+VNLIACEG ER ER+E FGKWKA
Sbjct: 429 AETLDYYTAIFESIDLTLPRDDRERINMEQHCLAREIVNLIACEGEERAERYEPFGKWKA 488

Query: 354 RLTMAGFRPSPLSSLVNATISKLLQSYSDNYKLAERDGALYLGWKKRPLVVSSAWH 187
           RLTMAGFRPSPLSSLVNATI  LLQSYSDNYKLAERDGALYLGWK RPLVVSSAWH
Sbjct: 489 RLTMAGFRPSPLSSLVNATIRTLLQSYSDNYKLAERDGALYLGWKSRPLVVSSAWH 544



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>CIGR1_ORYSA (Q69VG1) Chitin-inducible gibberellin-responsive protein 1|
          Length = 571

 Score =  173 bits (439), Expect = 2e-43
 Identities = 76/115 (66%), Positives = 98/115 (85%)
 Frame = -3

Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKAR 352
           ET++YY+A+FESID  LPRD++ER+++EQHCLA+++VN+IACEG +RVERHE+ GKWK+R
Sbjct: 457 ETMEYYSAMFESIDANLPRDNKERISVEQHCLAKDIVNIIACEGKDRVERHELLGKWKSR 516

Query: 351 LTMAGFRPSPLSSLVNATISKLLQSYSDNYKLAERDGALYLGWKKRPLVVSSAWH 187
           LTMAGFRP PLSS VN+ I KLL  YSD Y L E+DGA+ LGW+ R L+ +SAWH
Sbjct: 517 LTMAGFRPYPLSSYVNSVIRKLLACYSDKYTLDEKDGAMLLGWRSRKLISASAWH 571



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>RGL2_ARATH (Q8GXW1) DELLA protein RGL2 (RGA-like protein 2) (Scarecrow-like|
           protein 19)
          Length = 547

 Score = 97.4 bits (241), Expect = 2e-20
 Identities = 47/116 (40%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
 Frame = -3

Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKAR 352
           E L YY+++F+S++ +     ++RV  E + L R+++N++A EG++RVERHE   +W+ R
Sbjct: 430 EALHYYSSLFDSLEDSYSLPSQDRVMSEVY-LGRQILNVVAAEGSDRVERHETAAQWRIR 488

Query: 351 LTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGWKKRPLVVSSAW 190
           +  AGF P  L S      S LL  Y+  D Y++ E DG L +GW+ RPL+ +SAW
Sbjct: 489 MKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRVEENDGCLMIGWQTRPLITTSAW 544



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>RGL1_ARATH (Q9C8Y3) DELLA protein RGL1 (RGA-like protein 1) (RGA-like protein)|
          Length = 511

 Score = 96.7 bits (239), Expect = 4e-20
 Identities = 48/116 (41%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
 Frame = -3

Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKAR 352
           E+L YY+++F+S++   P  DR    M +  L R+++NL+ACEG +RVERHE   +W+ R
Sbjct: 394 ESLHYYSSLFDSLEGP-PSQDRV---MSELFLGRQILNLVACEGEDRVERHETLNQWRNR 449

Query: 351 LTMAGFRPSPLSSLVNATISKLLQSY--SDNYKLAERDGALYLGWKKRPLVVSSAW 190
             + GF+P  + S      S LL  Y  +D Y + E +G L LGW+ RPL+ +SAW
Sbjct: 450 FGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGCLLLGWQTRPLIATSAW 505



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>GAIP_CUCMA (Q6EI06) DELLA protein GAIP (Gibberellic acid-insensitive phloem|
           protein) (GAIP) (CmGAIP)
          Length = 579

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 46/116 (39%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
 Frame = -3

Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKAR 352
           E+L YY+ +F+S++ +    D+    M +  L +++ N++ACEGA+RVERHE   +W+ R
Sbjct: 457 ESLHYYSTLFDSLECSPNSQDKM---MSEMYLGKQICNVVACEGADRVERHETLTQWRTR 513

Query: 351 LTMAGFRPSPLSS--LVNATISKLLQSYSDNYKLAERDGALYLGWKKRPLVVSSAW 190
           L+ AGF P  L S     A+I   L    + Y++ E +G+L LGW  RPL+ +SAW
Sbjct: 514 LSSAGFDPIHLGSNAFKQASILLALFGSGEGYRVEENEGSLMLGWHTRPLIATSAW 569



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>GAI1_VITVI (Q8S4W7) DELLA protein GAI1 (Gibberellic acid-insensitive mutant|
           protein 1) (VvGAI1)
          Length = 590

 Score = 92.8 bits (229), Expect = 5e-19
 Identities = 48/118 (40%), Positives = 74/118 (62%), Gaps = 4/118 (3%)
 Frame = -3

Query: 531 ETLDYYTAIFESIDL--TLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWK 358
           E+L YY+ +F+S++     P + ++++  E + L +++ N++ACEG ERVERHE   +W+
Sbjct: 458 ESLHYYSTLFDSLEGCGVSPVNTQDKLMSEVY-LGQQICNVVACEGPERVERHETLAQWR 516

Query: 357 ARLTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGWKKRPLVVSSAW 190
           ARL  AGF P  L S      S LL  ++  D Y++ E +G L LGW  RPL+ +SAW
Sbjct: 517 ARLGSAGFDPVNLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAW 574



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>RGL3_ARATH (Q9LF53) DELLA protein RGL3 (RGA-like protein 3)|
          Length = 523

 Score = 92.4 bits (228), Expect = 7e-19
 Identities = 45/118 (38%), Positives = 73/118 (61%), Gaps = 4/118 (3%)
 Frame = -3

Query: 531 ETLDYYTAIFESID--LTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWK 358
           E L YY+++F+S++  + +P  DR    M +  L R+++NL+A EG++R+ERHE   +W+
Sbjct: 401 EALHYYSSLFDSLEDGVVIPSQDRV---MSEVYLGRQILNLVATEGSDRIERHETLAQWR 457

Query: 357 ARLTMAGFRPSPLSS--LVNATISKLLQSYSDNYKLAERDGALYLGWKKRPLVVSSAW 190
            R+  AGF P  L S     A++   L    D Y++ E DG+L L W+ +PL+ +SAW
Sbjct: 458 KRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEENDGSLMLAWQTKPLIAASAW 515



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>GAI_LYCES (Q7Y1B6) DELLA protein GAI (Gibberellic acid-insensitive mutant|
           protein)
          Length = 588

 Score = 92.0 bits (227), Expect = 9e-19
 Identities = 47/129 (36%), Positives = 72/129 (55%), Gaps = 15/129 (11%)
 Frame = -3

Query: 531 ETLDYYTAIFESID-------------LTLPRDDRERVNMEQHCLAREVVNLIACEGAER 391
           E L YY+ +F+S++             L  P  + + + M +  L R++ N++ACEG++R
Sbjct: 445 EALHYYSTMFDSLESSGSSSSASPTGILPQPPVNNQDLVMSEVYLGRQICNVVACEGSDR 504

Query: 390 VERHEVFGKWKARLTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGWKK 217
           VERHE   +W+ R+  +GF P  L S      S LL  ++  D Y++ E DG L LGW  
Sbjct: 505 VERHETLNQWRVRMNSSGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENDGCLMLGWHT 564

Query: 216 RPLVVSSAW 190
           RPL+ +SAW
Sbjct: 565 RPLIATSAW 573



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>SLR1_ORYSA (Q7G7J6) DELLA protein SLR1 (Protein SLENDER RICE1) (Gibberellic|
           acid-insensitive mutant protein) (OsGAI)
          Length = 625

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 51/128 (39%), Positives = 75/128 (58%), Gaps = 14/128 (10%)
 Frame = -3

Query: 531 ETLDYYTAIFESID--------LTLPR----DDRERVNMEQHCLAREVVNLIACEGAERV 388
           E+L YY+ +F+S++        L+ P        ++V  E + L R++ N++ACEGAER 
Sbjct: 494 ESLHYYSTMFDSLEGGSSGQAELSPPAAGGGGGTDQVMSEVY-LGRQICNVVACEGAERT 552

Query: 387 ERHEVFGKWKARLTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGWKKR 214
           ERHE  G+W+ RL  AGF P  L S      S LL  ++  D Y++ E++G L LGW  R
Sbjct: 553 ERHETLGQWRNRLGRAGFEPVHLGSNAYKQASTLLALFAGGDGYRVEEKEGCLTLGWHTR 612

Query: 213 PLVVSSAW 190
           PL+ +SAW
Sbjct: 613 PLIATSAW 620



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>DWRF8_MAIZE (Q9ST48) DELLA protein DWARF8 (Protein dwarf-8)|
          Length = 630

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 49/127 (38%), Positives = 71/127 (55%), Gaps = 13/127 (10%)
 Frame = -3

Query: 531 ETLDYYTAIFESI-----------DLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVE 385
           E+L YY+ +F+S+           D +          M +  L R++ N++ACEGAER E
Sbjct: 496 ESLHYYSTMFDSLEGAGAGSGQSTDASPAAAGGTDQVMSEVYLGRQICNVVACEGAERTE 555

Query: 384 RHEVFGKWKARLTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGWKKRP 211
           RHE  G+W++RL  +GF P  L S      S LL  ++  D Y++ E+DG L LGW  RP
Sbjct: 556 RHETLGQWRSRLGGSGFAPVHLGSNAYKQASTLLALFAGGDGYRVEEKDGCLTLGWHTRP 615

Query: 210 LVVSSAW 190
           L+ +SAW
Sbjct: 616 LIATSAW 622



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>GAIPB_CUCMA (Q6EI05) DELLA protein GAIP-B (Gibberellic acid-insensitive phloem|
           protein B) (GAIP-B) (CmGAIP-B)
          Length = 587

 Score = 90.1 bits (222), Expect = 3e-18
 Identities = 44/116 (37%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
 Frame = -3

Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKAR 352
           E+L YY+ +F+S++ +    D+    M +  L +++ N++ACEG++RVE HE   +W+ R
Sbjct: 464 ESLHYYSTLFDSLESSPNNQDKM---MSEMYLGKQICNVVACEGSDRVEWHETLTQWRTR 520

Query: 351 LTMAGFRPSPLSSLVNATISKLLQSY--SDNYKLAERDGALYLGWKKRPLVVSSAW 190
           L  +GF P  L S      S LL  +   + Y++ E +G+L LGW  RPL+V+SAW
Sbjct: 521 LCSSGFEPIHLGSNAFKQASMLLALFGSGEGYRVEENNGSLTLGWHTRPLIVTSAW 576



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>RGA2_BRACM (Q5BN22) DELLA protein RGA2 (RGA-like protein 2) (BrRGA2)|
          Length = 579

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
 Frame = -3

Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKAR 352
           E+L YY+ +F+S++      D+    M +  L +++ NL+ACEG +RVERHE   +W  R
Sbjct: 461 ESLHYYSTLFDSLEGVPSSQDKV---MSEVYLGKQICNLVACEGPDRVERHETLSQWANR 517

Query: 351 LTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGWKKRPLVVSSAW 190
              +GF P+ L S      S LL  ++  + Y++ E +G L LGW  RPL+ +SAW
Sbjct: 518 FGSSGFAPAHLGSNAFKQASMLLALFNGGEGYRVEENNGCLMLGWHTRPLITTSAW 573



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>RHT1_WHEAT (Q9ST59) DELLA protein RHT-1 (Reduced height protein 1) (Protein|
           Rht-B1/Rht-D1)
          Length = 623

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 49/131 (37%), Positives = 70/131 (53%), Gaps = 17/131 (12%)
 Frame = -3

Query: 531 ETLDYYTAIFESIDLTLPRDDRERVN---------------MEQHCLAREVVNLIACEGA 397
           E+L YY+ +F+S++          V+               M +  L R++ N++ACEGA
Sbjct: 488 ESLHYYSTMFDSLEGGSSGGGPSEVSSGAAAAPAAAGTDQVMSEVYLGRQICNVVACEGA 547

Query: 396 ERVERHEVFGKWKARLTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGW 223
           ER ERHE  G+W+ RL  AGF    L S      S LL  ++  D YK+ E++G L LGW
Sbjct: 548 ERTERHETLGQWRNRLGNAGFETVHLGSNAYKQASTLLALFAGGDGYKVEEKEGCLTLGW 607

Query: 222 KKRPLVVSSAW 190
             RPL+ +SAW
Sbjct: 608 HTRPLIATSAW 618



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>RGA1_BRACM (Q5BN23) DELLA protein RGA1 (RGA-like protein 1) (BrRGA1)|
          Length = 573

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 2/116 (1%)
 Frame = -3

Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKAR 352
           E+L YY+ +F+S++      D+    M +  L +++ NL+ACEG +RVERHE   +W  R
Sbjct: 455 ESLHYYSTLFDSLEGAPSSQDKV---MSEVYLGKQICNLVACEGPDRVERHETLSQWSNR 511

Query: 351 LTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGWKKRPLVVSSAW 190
              +GF P+ L S      S LL  ++  + Y++ E +G L L W  RPL+ +SAW
Sbjct: 512 FGSSGFAPAHLGSNAFKQASTLLALFNGGEGYRVEENNGCLMLSWHTRPLITTSAW 567



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>GAI_ARATH (Q9LQT8) DELLA protein GAI (Gibberellic acid-insensitive mutant|
           protein) (Restoration of growth on ammonia protein 2)
          Length = 533

 Score = 85.9 bits (211), Expect = 7e-17
 Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
 Frame = -3

Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKAR 352
           E+L YY+ +F+S++      D+    M +  L +++ N++AC+G +RVERHE   +W+ R
Sbjct: 416 ESLHYYSTLFDSLEGVPSGQDKV---MSEVYLGKQICNVVACDGPDRVERHETLSQWRNR 472

Query: 351 LTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGWKKRPLVVSSAW 190
              AGF  + + S      S LL  ++  + Y++ E DG L LGW  RPL+ +SAW
Sbjct: 473 FGSAGFAAAHIGSNAFKQASMLLALFNGGEGYRVEESDGCLMLGWHTRPLIATSAW 528



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>SLN1_HORVU (Q8W127) DELLA protein SLN1 (Slender protein 1)|
          Length = 618

 Score = 85.9 bits (211), Expect = 7e-17
 Identities = 48/130 (36%), Positives = 69/130 (53%), Gaps = 16/130 (12%)
 Frame = -3

Query: 531 ETLDYYTAIFESIDLTLPRDDRERVN--------------MEQHCLAREVVNLIACEGAE 394
           E+L YY+ +F+S++        E  +              M +  L R++ N++ACEG E
Sbjct: 484 ESLHYYSTMFDSLEGGSSGGPSEVSSGGAAPAAAAGTDQVMSEVYLGRQICNVVACEGTE 543

Query: 393 RVERHEVFGKWKARLTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGWK 220
           R ERHE  G+W+ RL  AGF    L S      S LL  ++  D YK+ E++G L LGW 
Sbjct: 544 RTERHETLGQWRNRLGNAGFETVHLGSNAYKQASTLLALFAGGDGYKVEEKEGCLTLGWH 603

Query: 219 KRPLVVSSAW 190
            RPL+ +SAW
Sbjct: 604 TRPLIATSAW 613



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>RGA_ARATH (Q9SLH3) DELLA protein RGA (Repressor on the ga1-3 mutant)|
           (GAI-related sequence) (Restoration of growth on ammonia
           protein 1)
          Length = 587

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
 Frame = -3

Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKAR 352
           E+L YY+ +F+S++      D+    M +  L +++ NL+ACEG +RVERHE   +W  R
Sbjct: 468 ESLHYYSTLFDSLEGVPNSQDKV---MSEVYLGKQICNLVACEGPDRVERHETLSQWGNR 524

Query: 351 LTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGWKKRPLVVSSAW 190
              +G  P+ L S      S LL  ++    Y++ E +G L LGW  RPL+ +SAW
Sbjct: 525 FGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVEESNGCLMLGWHTRPLITTSAW 580



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>GAI_GOSHI (Q84TQ7) DELLA protein GAI (Gibberellic acid-insensitive mutant|
           protein) (GhGAI)
          Length = 537

 Score = 82.0 bits (201), Expect = 9e-16
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
 Frame = -3

Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKAR 352
           E L YY+ +F+S++ +      + + M +  L R++ N++ACEG +RVERHE   +W+ R
Sbjct: 417 EALHYYSTLFDSLEGSGVAPASQDLAMSELYLGRQICNVVACEGMDRVERHEPLTQWRTR 476

Query: 351 LTMAGFRPSPLSSLVNATISKLLQSYS--DNYKLAERDGALYLGWKKRPLV 205
           +  AG  P  L S      S LL  ++  D Y++ E +G L LGW  RPL+
Sbjct: 477 METAGVSPVHLGSNAYKQASMLLALFASGDGYRVEENNGCLMLGWHTRPLI 527



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>MOC_ORYSA (Q84MM9) Protein MONOCULM 1|
          Length = 441

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
 Frame = -3

Query: 525 LDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKARLT 346
           +D+Y+A+FE+++ T+P   RER+ +EQ  L RE+   +   G       E   +W     
Sbjct: 326 MDHYSAVFEALEATVPPGSRERLAVEQEVLGREIEAAVGPSGGRWWRGIE---RWGGAAR 382

Query: 345 MAGFRPSPLSSLVNATISKLLQSY--SDNYKLAERDGALYLGWKKRPLVVSSAW 190
            AGF   PLS+   +    LL+ +  S+ Y + E  GA +LGW+ RPL+  SAW
Sbjct: 383 AAGFAARPLSAFAVSQARLLLRLHYPSEGYLVQEARGACFLGWQTRPLLSVSAW 436



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>NSP2_MEDTR (Q5NE24) Nodulation signaling pathway 2 protein|
          Length = 508

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
 Frame = -3

Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREV---VNLIACEGAERVERHEVFGKW 361
           ++L +Y+A+F+S++   P  +R R  +E+      +   +  I   G E  E    +G+W
Sbjct: 385 DSLHHYSAVFDSLEAGFPMQNRARTLVERVFFGPRIAGSLGRIYRTGGE--EERRSWGEW 442

Query: 360 KARLTMAGFRPSPLSSLVNATISKLLQSYSDNYKLAE---RDGALYLGWKKRPLVVSSAW 190
              L   GFR  P+S   +     LL  ++D Y++ E       L L WK R L+ +S W
Sbjct: 443 ---LGEVGFRGVPVSFANHCQAKLLLGLFNDGYRVEEVGVGSNKLVLDWKSRRLLSASLW 499



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>POLR_ELV (P35928) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1748

 Score = 34.7 bits (78), Expect = 0.17
 Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
 Frame = -3

Query: 315 SLVNATISKLL-----QSYSDNYKLAERDGALYLGWKKRPLVVSS 196
           S VNA + K L     QS  DNY L     +  LGWK+RPL++ S
Sbjct: 512 SSVNALLRKFLGPNSPQSNLDNYNLHLHPESFTLGWKRRPLLLDS 556



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>NSP1_MEDTR (Q4VYC8) Nodulation signaling pathway 1 protein|
          Length = 554

 Score = 32.7 bits (73), Expect = 0.66
 Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
 Frame = -3

Query: 477 RDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKARLTMAGFRPSPLSSLVNAT 298
           RD  ER  ME    A+ + N       E  ER E   KW  R+  AGF            
Sbjct: 459 RDSDERKMMEGEA-AKALTNQ-----REMNERRE---KWCERMKEAGFAGEVFGEDAIDG 509

Query: 297 ISKLLQSYSDNY--KLAERDGALYLGWKKRPLVVSSAW 190
              LL+ Y +N+  K+ E   ++ L WK +P+   S W
Sbjct: 510 GRALLRKYDNNWEMKVEENSTSVELWWKSQPVSFCSLW 547



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>GRPE_XANCP (Q8PAL0) Protein grpE (HSP-70 cofactor)|
          Length = 172

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
 Frame = -3

Query: 468 RERVNMEQHC--LAREVVNLIACEGAERV-ERHEVFGKWKARLTMAGFRPSPLSSLVNAT 298
           RER ++E     +AR+V N       + + E   VF    A LT AG  PSPL   ++ T
Sbjct: 43  RERADLENQRKRIARDVENARKFANEKLLGELLPVFDSLDAGLTAAGTEPSPLRDGLDLT 102

Query: 297 ISKLLQSYSDN 265
             +LL+  +DN
Sbjct: 103 YKQLLKVAADN 113



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>GRPE_XANAC (Q8PMB1) Protein grpE (HSP-70 cofactor)|
          Length = 172

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
 Frame = -3

Query: 468 RERVNMEQHC--LAREVVNLIACEGAERV-ERHEVFGKWKARLTMAGFRPSPLSSLVNAT 298
           RER ++E     +AR+V N       + + E   VF    A LT AG  PSPL   ++ T
Sbjct: 43  RERADLENQRKRIARDVENARKFANEKLLGELLPVFDSLDAGLTAAGTEPSPLRDGLDMT 102

Query: 297 ISKLLQSYSDN 265
             +LL+  +DN
Sbjct: 103 YKQLLKVAADN 113



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>WNT8B_MOUSE (Q9WUD6) Protein Wnt-8b precursor|
          Length = 350

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = -3

Query: 468 RERVNMEQ---HCLAREVVNLIACEGAERVERHEVFGKWKAR 352
           RE V++E    +CL  + + L+  EG E + R    G+W+ R
Sbjct: 243 RELVHLEDSPDYCLENKTLGLLGTEGRECLRRGRALGRWERR 284



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>WNT8B_HUMAN (Q93098) Protein Wnt-8b precursor|
          Length = 351

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = -3

Query: 468 RERVNMEQ---HCLAREVVNLIACEGAERVERHEVFGKWKAR 352
           RE V++E    +CL  + + L+  EG E + R    G+W+ R
Sbjct: 244 RELVHLEDSPDYCLENKTLGLLGTEGRECLRRGRALGRWERR 285



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>WISP3_HUMAN (O95389) WNT1-inducible signaling pathway protein 3 precursor|
           (WISP-3)
          Length = 354

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -3

Query: 342 AGFRPSPLSSLVNATISKLLQSYSDNYKLAERDGALYLGWKKRPLVVSSAW 190
           +G +    S   N ++  LLQ  S +YK       L L WKK+ LV ++ W
Sbjct: 166 SGAKGGKKSDQSNCSLEPLLQQLSTSYKTMPAYRNLPLIWKKKCLVQATKW 216



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>COAT_RCNMV (P22955) Coat protein (Capsid protein)|
          Length = 339

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
 Frame = -3

Query: 513 TAIFESIDLTLPRDDRERVNMEQHCLAREVVN-----LIACEGAERVERHEVFGKWKARL 349
           TA++E   LT+P D++ R   +   + R++V+      +   G++ +E  ++F   +   
Sbjct: 148 TAVYEKCSLTIPADNQWRFVADNTTVDRKLVDFGQLLFVTHSGSDGIETGDIFLDCEVEF 207

Query: 348 TMAGFRPSPLSSLVNATISKL 286
                 P P +S+V  T+  L
Sbjct: 208 K----GPQPTASIVQKTVIDL 224



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>TOP1_METJA (Q59046) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
           (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
           (Swivelase)
          Length = 761

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 15/68 (22%), Positives = 34/68 (50%)
 Frame = -3

Query: 531 ETLDYYTAIFESIDLTLPRDDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKAR 352
           ET +    ++E+  ++ PR   +++  ++  L  +++N+I        + H V+GKW  R
Sbjct: 299 ETQEIAQKLYENALISYPRTSSQKLPKDRKYL-EDILNII--------KNHPVYGKWAER 349

Query: 351 LTMAGFRP 328
           +     +P
Sbjct: 350 ILKENLKP 357


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,185,278
Number of Sequences: 219361
Number of extensions: 850992
Number of successful extensions: 2562
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2528
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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