ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah63m03 |
|---|---|
| Clone Library Name | barley_pub |
>ALA2_PANMI (P34106) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)| (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 Score = 134 bits (336), Expect = 2e-31 Identities = 59/110 (53%), Positives = 83/110 (75%) Frame = -2 Query: 521 RRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEAT 342 RRA+ + D FN+ + CN EGAMY FPQI LP++A++ AK+A K PD +Y L+LLE+T Sbjct: 373 RRAKALEDAFNNLEGISCNKAEGAMYLFPQIHLPKKAIEAAKAANKAPDAFYALRLLEST 432 Query: 341 GISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSFMDQYQD 192 GI VPGSGFGQ G +H+R TILP E+ +PA+++ FK F+++FM +Y+D Sbjct: 433 GIVVVPGSGFGQVPGTWHIRCTILPQEDKIPAVITRFKAFHEAFMAEYRD 482
>ALA2_HORVU (P52894) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)| (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 Score = 130 bits (327), Expect = 2e-30 Identities = 59/110 (53%), Positives = 79/110 (71%) Frame = -2 Query: 521 RRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEAT 342 RRA+ + FN + CN EGAMY FPQI LPQ+A++ AK+A K PD +Y L+LLE+T Sbjct: 373 RRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLEST 432 Query: 341 GISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSFMDQYQD 192 GI VPGSGFGQ G +H R TILP E+ +PA++S F F+++FM +Y+D Sbjct: 433 GIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVISRFTVFHEAFMSEYRD 482
>ALAT_HUMAN (P24298) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 108 bits (271), Expect = 7e-24 Identities = 48/107 (44%), Positives = 71/107 (66%) Frame = -2 Query: 518 RAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATG 339 +A++ FN + CN +GAMYSFP+++LP RA++ A+ G PD+++CL+LLE TG Sbjct: 388 KAKLTEQVFNEAPGISCNPVQGAMYSFPRVQLPPRAVERAQELGLAPDMFFCLRLLEETG 447 Query: 338 ISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSFMDQY 198 I VPGSGFGQ+EG +H R TILP E + ++ +F+ F +Y Sbjct: 448 ICVVPGSGFGQREGTYHFRMTILPPLEKLRLLLEKLSRFHAKFTLEY 494
>ALAT_MOUSE (Q8QZR5) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 107 bits (267), Expect = 2e-23 Identities = 49/107 (45%), Positives = 69/107 (64%) Frame = -2 Query: 518 RAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATG 339 +A++ FN + CN +GAMYSFPQI+LP +A+ A+ G PD+++CL LLE TG Sbjct: 388 KAKLTEQVFNEAPGIRCNPVQGAMYSFPQIQLPLKAVQRAQDLGLAPDMFFCLCLLEETG 447 Query: 338 ISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSFMDQY 198 I VPGSGFGQ+EG +H R TILP E + ++ + F+ F +Y Sbjct: 448 ICVVPGSGFGQQEGTYHFRMTILPPMEKLRVLLEKLRHFHAKFTHEY 494
>ALAT_RAT (P25409) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 105 bits (263), Expect = 6e-23 Identities = 48/107 (44%), Positives = 68/107 (63%) Frame = -2 Query: 518 RAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATG 339 +A++ FN + CN +GAMYSFPQ++LP +A+ A+ G PD+++CL LLE TG Sbjct: 388 KAKLTEQVFNEAPGIRCNPVQGAMYSFPQVQLPLKAVQRAQELGLAPDMFFCLCLLEETG 447 Query: 338 ISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSFMDQY 198 I VPGSGFGQ+EG +H R TILP E + ++ F+ F +Y Sbjct: 448 ICVVPGSGFGQQEGTYHFRMTILPPMEKLRLLLEKLSHFHAKFTHEY 494
>ALAM_YEAST (P52893) Putative alanine aminotransferase, mitochondrial precursor| (EC 2.6.1.2) (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 592 Score = 100 bits (249), Expect = 2e-21 Identities = 50/109 (45%), Positives = 68/109 (62%) Frame = -2 Query: 518 RAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATG 339 RA + + FNS + C +GAMY FP+I LP +A+ A+ PD +YC KLLE+TG Sbjct: 487 RAMTLYETFNSLEGIECQKPQGAMYLFPKIDLPFKAVQEARHLELTPDEFYCKKLLESTG 546 Query: 338 ISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSFMDQYQD 192 I TVPGSGFGQ+ G +HLRTT L + + ++ F+ F DQY+D Sbjct: 547 ICTVPGSGFGQEPGTYHLRTTFLAPGLEW---IKKWESFHKEFFDQYRD 592
>ALAT_YEAST (P52892) Putative alanine aminotransferase (EC 2.6.1.2)| (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 507 Score = 94.7 bits (234), Expect = 1e-19 Identities = 44/109 (40%), Positives = 68/109 (62%) Frame = -2 Query: 518 RAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATG 339 RA ++ + F + C +GAMY FP++ LP++A+ ++ G EPD +YC LLE+TG Sbjct: 402 RANLLYETFKELEGIECQKPQGAMYLFPRLVLPKKALCESERLGIEPDEFYCTSLLESTG 461 Query: 338 ISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSFMDQYQD 192 I TVPGSGFGQ+ G +H+RTT L + +K+F+ F +Y++ Sbjct: 462 ICTVPGSGFGQRPGTYHVRTTFLAPGTKW---IQDWKEFHQDFFSKYRN 507
>ALAT_SCHPO (Q10334) Putative alanine aminotransferase (EC 2.6.1.2)| (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 505 Score = 76.3 bits (186), Expect = 5e-14 Identities = 38/102 (37%), Positives = 58/102 (56%) Frame = -2 Query: 500 DGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPG 321 +G + V C GAMY P + LP++ + AK+ +PD +Y ++LL+ +GI VPG Sbjct: 407 EGTKRMKRVSCLEPHGAMYLHPSVSLPEKLITTAKAQKIQPDEFYAIELLKRSGICVVPG 466 Query: 320 SGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSFMDQYQ 195 SGFGQ EG +H+R T L + + F K ++ MD Y+ Sbjct: 467 SGFGQPEGDYHIRITFLAKGTE---YIERFVKAHNEIMDLYE 505
>AATB2_RHIME (Q06191) Aspartate aminotransferase B (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 410 Score = 42.4 bits (98), Expect = 8e-04 Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 2/73 (2%) Frame = -2 Query: 521 RRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGK--EPDVYYCLKLLE 348 RR ++ +G N+ + C EGA Y+F R + +GK E D +C LLE Sbjct: 310 RRRNLVVNGLNAIEGLDCRVPEGAFYTFSGCAGVARRVT---PSGKRIESDTDFCAYLLE 366 Query: 347 ATGISTVPGSGFG 309 + ++ VPGS FG Sbjct: 367 DSHVAVVPGSAFG 379
>AAT_SULTO (Q972A2) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 399 Score = 41.6 bits (96), Expect = 0.001 Identities = 28/105 (26%), Positives = 49/105 (46%) Frame = -2 Query: 521 RRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEAT 342 +R IM + + + + ++GA Y FP I ++ K A + LKL+E Sbjct: 300 KRRDIMYEELKKIKGIQVHKSQGAFYMFPFIG------EILKKANLSVKDF-SLKLIEEK 352 Query: 341 GISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSFM 207 G++T+PG F + G +R + E+D+ + K+F D M Sbjct: 353 GVTTIPGEVFPLEVGKDFVRLSFAVKEDDIREGIKRMKEFIDMLM 397
>AATB1_RHIME (P58350) Aspartate aminotransferase B (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 410 Score = 39.3 bits (90), Expect = 0.007 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%) Frame = -2 Query: 521 RRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGK--EPDVYYCLKLLE 348 RR ++ +G N+ + C EGA Y+F + +GK + D +C LLE Sbjct: 310 RRRDLVVNGLNAIDGLDCRVPEGAFYTFSGCA---GVLGKVTPSGKRIKTDTDFCAYLLE 366 Query: 347 ATGISTVPGSGFG 309 ++ VPGS FG Sbjct: 367 DAHVAVVPGSAFG 379
>AAT_RHILP (O86459) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (ASPAT) Length = 400 Score = 37.7 bits (86), Expect = 0.019 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%) Frame = -2 Query: 518 RAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGK--EPDVYYCLKLLEA 345 R ++ N + +VC EGA Y +P + + +GK E D + +LLE+ Sbjct: 301 RRDLVVSMLNQAKGIVCPVPEGAFYVYPSCK---GLIGKTAPSGKVIETDEDFVSELLES 357 Query: 344 TGISTVPGSGFG 309 G++ V GS FG Sbjct: 358 EGVAVVHGSAFG 369
>AAT1_BACSU (P53001) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (ASPAT) Length = 393 Score = 37.4 bits (85), Expect = 0.025 Identities = 23/59 (38%), Positives = 29/59 (49%) Frame = -2 Query: 470 CNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGV 294 C EGA Y FP A + A+S G + + LLE ++ VPGSGFG E V Sbjct: 315 CVKPEGAFYLFPN------AKEAAQSCGFKDVDEFVKALLEEEKVAIVPGSGFGSPENV 367
>AAT_STRVG (Q60013) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (ASPAT) Length = 397 Score = 37.4 bits (85), Expect = 0.025 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 2/101 (1%) Frame = -2 Query: 521 RRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEP--DVYYCLKLLE 348 RR Q M N V C EGA Y++P + + + + GK P V +L+ Sbjct: 297 RRRQTMVKMLNEIDGVFCPTPEGAFYAYPSV----KELLGKEIRGKRPQSSVELAALILD 352 Query: 347 ATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKK 225 ++ VPG FG +LR + +ED+ +S +K Sbjct: 353 EVEVAVVPGEAFGTPG---YLRLSYALGDEDLVEGVSRIQK 390
>AAT_BACST (Q59228) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (ASPAT) Length = 393 Score = 37.0 bits (84), Expect = 0.033 Identities = 28/88 (31%), Positives = 36/88 (40%) Frame = -2 Query: 521 RRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEAT 342 +R I+ D C +GA Y FP R + A AG + LLE Sbjct: 298 QRLNIIYDKLVQIPGFTCVKPQGAFYLFPNAR------EAAAMAGCRTVDEFVAALLEEA 351 Query: 341 GISTVPGSGFGQKEGVFHLRTTILPAEE 258 ++ VPGSGFG + V T L A E Sbjct: 352 KVALVPGSGFGAPDNVRLSYATSLDALE 379
>AAT_SYNY3 (Q55128) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (ASPAT) Length = 389 Score = 34.7 bits (78), Expect = 0.16 Identities = 20/75 (26%), Positives = 37/75 (49%) Frame = -2 Query: 518 RAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATG 339 R Q++ +G N + C +GA Y F +D+AK+ + + +LLE+ Sbjct: 300 RRQVIVEGINQIAGLSCPNPKGAFYVF---------VDIAKTGLNSLE--FSARLLESHQ 348 Query: 338 ISTVPGSGFGQKEGV 294 ++ +PG+ FG + V Sbjct: 349 VAVIPGAAFGADDCV 363
>AATA_RHIME (Q02635) Aspartate aminotransferase A (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 400 Score = 34.3 bits (77), Expect = 0.21 Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 4/74 (5%) Frame = -2 Query: 518 RAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSA--GK--EPDVYYCLKLL 351 R ++ N + + C EGA Y +P A + K+A GK E D + +LL Sbjct: 301 RRDLVVSMLNQAKGISCPTPEGAFYVYPSC-----AGLIGKTAPSGKVIETDEDFVSELL 355 Query: 350 EATGISTVPGSGFG 309 E G++ V GS FG Sbjct: 356 ETEGVAVVHGSAFG 369
>AAT_MYCTU (P63498) Probable aspartate aminotransferase (EC 2.6.1.1)| (Transaminase A) (ASPAT) Length = 429 Score = 31.6 bits (70), Expect = 1.4 Identities = 28/94 (29%), Positives = 37/94 (39%) Frame = -2 Query: 491 NSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGF 312 N V C GA+Y+FP RL D+ + D L LL + I G+GF Sbjct: 343 NEIPGVSCVKPAGALYAFP--RLDPEVYDI------DDDEQLVLDLLLSEKILVTQGTGF 394 Query: 311 GQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSF 210 HLR LP D+ A + F S+ Sbjct: 395 NW-PAPDHLRLVTLPWSRDLAAAIERLGNFLVSY 427
>AAT_MYCBO (P63499) Probable aspartate aminotransferase (EC 2.6.1.1)| (Transaminase A) (ASPAT) Length = 429 Score = 31.6 bits (70), Expect = 1.4 Identities = 28/94 (29%), Positives = 37/94 (39%) Frame = -2 Query: 491 NSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGF 312 N V C GA+Y+FP RL D+ + D L LL + I G+GF Sbjct: 343 NEIPGVSCVKPAGALYAFP--RLDPEVYDI------DDDEQLVLDLLLSEKILVTQGTGF 394 Query: 311 GQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSF 210 HLR LP D+ A + F S+ Sbjct: 395 NW-PAPDHLRLVTLPWSRDLAAAIERLGNFLVSY 427
>YARA_PROST (P46117) Putative HTH-type transcriptional regulator in aarA| 3'region Length = 282 Score = 30.8 bits (68), Expect = 2.4 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = -2 Query: 389 GKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILP 267 G PD+ + LKL G ST+ + FGQ E V L +LP Sbjct: 190 GNTPDINHMLKLANKKGCSTIVLTRFGQDEAV-RLADLVLP 229
>THIC_RHILO (Q98AZ3) Thiamine biosynthesis protein thiC| Length = 619 Score = 30.4 bits (67), Expect = 3.1 Identities = 20/64 (31%), Positives = 32/64 (50%) Frame = -2 Query: 437 PQIRLPQRAMDVAKSAGKEPDVYYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEE 258 PQIR+P R + V +AG+ P + Y + +G T P ++G+ LR + A Sbjct: 35 PQIRVPMREISVHPTAGEPPVIVY-----DPSGPYTDPTVETSIEKGLARLRHEWITARG 89 Query: 257 DMPA 246 D+ A Sbjct: 90 DVEA 93
>SNPC4_HUMAN (Q5SXM2) snRNA-activating protein complex subunit 4 (SNAPc subunit| 4) (snRNA-activating protein complex 190 kDa subunit) (SNAPc 190 kDa subunit) (Proximal sequence element-binding transcription factor alpha subunit) (PSE-binding factor alpha Length = 1469 Score = 30.0 bits (66), Expect = 4.0 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = -1 Query: 372 LLLPQASGSHWNIHCSRLRFWSERRGVPSKDNDPA 268 +L P +SGSH I S L SE +PS+D DPA Sbjct: 20 ILDPGSSGSHVEISESSLESDSEADSLPSEDLDPA 54
>HAGA1_PORGI (P59915) Hemagglutinin A precursor| Length = 2164 Score = 30.0 bits (66), Expect = 4.0 Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Frame = +1 Query: 208 MNESLNFLKLDMIAGMSSSA-GRIVVLRWNTPSF*PKPEPGTVDI 339 +N +++ ++ + + ++ SA G+ V L+W+ P+ P P PGT + Sbjct: 1369 VNVTVDPVQFNPVQNLTGSAVGQKVTLKWDAPNGTPNPNPGTTTL 1413 Score = 30.0 bits (66), Expect = 4.0 Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Frame = +1 Query: 208 MNESLNFLKLDMIAGMSSSA-GRIVVLRWNTPSF*PKPEPGTVDI 339 +N +++ ++ + + ++ SA G+ V L+W+ P+ P P PGT + Sbjct: 917 VNVTVDPVQFNPVQNLTGSAVGQKVTLKWDAPNGTPNPNPGTTTL 961 Score = 29.6 bits (65), Expect = 5.3 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +1 Query: 259 SSAGRIVVLRWNTPSF*PKPEPGTVDI 339 S+ G+ V L+W+ P+ P P PGT + Sbjct: 483 SAVGQKVTLKWDAPNGTPNPNPGTTTL 509
>NUOL_CAMJE (Q9PMA7) NADH-quinone oxidoreductase chain L (EC 1.6.99.5) (NADH| dehydrogenase I, chain L) (NDH-1, chain L) Length = 596 Score = 29.6 bits (65), Expect = 5.3 Identities = 12/39 (30%), Positives = 22/39 (56%) Frame = +2 Query: 35 ISPLYISSIATSFLHHSYSSQLINQLQLLVEKSSIILIC 151 +SPL + +I F HS+ L +L + ++ I++IC Sbjct: 446 MSPLMVLAIIAGFFEHSFFEYLSTKLVFIDAQNQIVMIC 484
>HAGA2_PORGI (Q51845) Hemagglutinin A precursor| Length = 2628 Score = 29.6 bits (65), Expect = 5.3 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +1 Query: 259 SSAGRIVVLRWNTPSF*PKPEPGTVDI 339 S+ G+ V L+W+ P+ P P PGT + Sbjct: 483 SAVGQKVTLKWDAPNGTPNPNPGTTTL 509
>AAT_SULAC (Q4J8X2) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 400 Score = 29.3 bits (64), Expect = 6.9 Identities = 20/105 (19%), Positives = 43/105 (40%) Frame = -2 Query: 521 RRAQIMTDGFNSCRNVVCNFTEGAMYSFPQIRLPQRAMDVAKSAGKEPDVYYCLKLLEAT 342 +R +M + + N ++GA Y FP + ++ + +G + + L++ Sbjct: 301 KRRDVMYSELKKIKGIQVNKSQGAFYMFPYLG------EILRKSGMSTK-DFSVNLIKEK 353 Query: 341 GISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMSSFKKFNDSFM 207 G+ T+PG F G +R + E + + +F + M Sbjct: 354 GVVTIPGEVFPLDAGKEFVRLSFAVDENVIKEGVQRMSEFINQLM 398 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,990,292 Number of Sequences: 219361 Number of extensions: 1610646 Number of successful extensions: 4453 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 4326 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4446 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3985467738 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
