>LPXB_BORPE (Q7VYB7) Lipid-A-disaccharide synthase (EC 2.4.1.182)|
          Length = 393

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +1

Query: 34  RLPRVTCLLPSTGQCIAKKSEHTSCAMLRPVPNLRC*SVA*EKLDGRGRT 183
           R PR+ C++P       +++E  + A   PVP LRC + A    +G+G T
Sbjct: 218 RDPRLQCVVPMVNP--QRRAEFEAIATQHPVPGLRCVTAA----EGQGET 261

>LPXB_BORPA (Q7WA47) Lipid-A-disaccharide synthase (EC 2.4.1.182)|
          Length = 393

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +1

Query: 34  RLPRVTCLLPSTGQCIAKKSEHTSCAMLRPVPNLRC*SVA*EKLDGRGRT 183
           R PR+ C++P       +++E  + A   PVP LRC + A    +G+G T
Sbjct: 218 RDPRLQCVVPMVNP--QRRAEFEAIAAQHPVPGLRCVTAA----EGQGET 261

>LPXB_BORBR (Q7WJ81) Lipid-A-disaccharide synthase (EC 2.4.1.182)|
          Length = 393

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +1

Query: 34  RLPRVTCLLPSTGQCIAKKSEHTSCAMLRPVPNLRC*SVA*EKLDGRGRT 183
           R PR+ C++P       +++E  + A   PVP LRC + A    +G+G T
Sbjct: 218 RDPRLQCVVPMVNP--QRRAEFEAIAAQHPVPGLRCVTAA----EGQGET 261

>ALK_MOUSE (P97793) ALK tyrosine kinase receptor precursor (EC 2.7.10.1)|
           (Anaplastic lymphoma kinase) (CD246 antigen)
          Length = 1621

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +3

Query: 177 KDGQQQGKTAWHALQNQGLSVCWCLVLIWILNXT 278
           K G++Q +T WH   ++GLS+ W   ++ +L+ T
Sbjct: 576 KTGKEQSRTVWHVATDEGLSL-WQHTVLSLLDVT 608

>ALK_HUMAN (Q9UM73) ALK tyrosine kinase receptor precursor (EC 2.7.10.1)|
           (Anaplastic lymphoma kinase) (CD246 antigen)
          Length = 1620

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 177 KDGQQQGKTAWHALQNQGLSVCWCLVL 257
           K G++QG+  WH    +GLS+   +VL
Sbjct: 572 KTGKEQGRMVWHVAAYEGLSLWQWMVL 598

>CHD6_HUMAN (Q8TD26) Chromodomain-helicase-DNA-binding protein 6 (EC 3.6.1.-)|
            (ATP-dependent helicase CHD6) (CHD-6) (Radiation-induced
            gene B protein)
          Length = 2715

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = +3

Query: 69   RPMHSQEIRTHLVRYVKTSSESPMLKCSLREAGWS-WKDGQQQGKTAWHALQNQGLSVCW 245
            RP  S+ +     RY++  +E   ++ +L   GW  WKD    G+  WH  +     +C 
Sbjct: 1078 RPTRSRRLNDKARRYLR--AECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICR 1135

Query: 246  CLVL 257
             L++
Sbjct: 1136 ALLV 1139

>SYGA_RICPR (Q9ZCB0) Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)|
           (Glycine--tRNA ligase alpha chain) (GlyRS)
          Length = 289

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
 Frame = +3

Query: 24  IILKIT*SNLFIAQYRPMHSQEI--RTHLVRYVKTSSESPMLKCSLREAGWS-WKDGQQ 191
           +ILK +  N+     + + S ++  +TH +R+V+   ESP L  S    GW  W DG +
Sbjct: 82  VILKPSPDNIQDLYLKSLESLDLDLKTHDIRFVEDDWESPTLGAS--GLGWEIWCDGME 138


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,293,603
Number of Sequences: 219361
Number of extensions: 702507
Number of successful extensions: 1848
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1847
length of database: 80,573,946
effective HSP length: 76
effective length of database: 63,902,510
effective search space used: 1533660240
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)