Clone Name | rbah63l22 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_469814.1| Oryza sativa (japonica cultivar-group), mRNA Length = 935 Score = 436 bits (220), Expect = e-119 Identities = 385/440 (87%) Strand = Plus / Minus Query: 145 tccaactgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggcc 204 |||| ||||| ||||||||||||||| || ||||||||||||||||| |||||||| ||| Sbjct: 669 tccagctgaggacccagcttctcctcggctgccttctcagccttgacacgcagcttcgcc 610 Query: 205 agttgcttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttcc 264 ||||||||||||||||| || | ||||||||||||||||||||||||||||| || ||| Sbjct: 609 agttgcttcctcctgtcataggcaaccttggccttctccttcctcttctcctcaagctcc 550 Query: 265 ttgatagtttcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtac 324 |||| || |||| ||||||||| || ||||||||||| |||| |||||| ||||||||| Sbjct: 549 ctgatggtgtcatagtagttccagccaacctccttggagagctggccgaggaggcagtac 490 Query: 325 ttatgacccggctgcagcctcagaaccttgagcgcgtcggggatgaccatacgcttggtg 384 || || || ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 489 ttgtgcccaggctgcagcctcagaaccttgagcgcgtcggggatgaccatgcgcttggtc 430 Query: 385 cgatcataaggcggcgggacgccctcgaacgccttcagcctggcgagcgcagcctcgccg 444 | || || |||||||| ||||||||| ||||||||||||| || ||||| ||||| || Sbjct: 429 ctgtcgtacggcggcggcacgccctcgtacgccttcagccttgccagcgccgcctctccc 370 Query: 445 cggggcgtcttgtgcgggatcatgccgcgcacggtgcgccagaaaattttcgagggggcg 504 | ||||||||||||||||||||||| ||||||||||||| || || | ||||| | Sbjct: 369 ctcttggtcttgtgcgggatcatgccgcggacggtgcgccagaggatcttggcgggggag 310 Query: 505 cggaagtggatgggaccgtgcgacggcttggtgttcatccgcttgcggaggaagcggagg 564 |||||||||||||| || || || |||||||||||||||| ||||||||||||||||||| Sbjct: 309 cggaagtggatggggccatgggagggcttggtgttcatcctcttgcggaggaagcggagg 250 Query: 565 tacttcatcttctgacggac 584 |||||||||||||| ||||| Sbjct: 249 tacttcatcttctggcggac 230
>gb|AY846823.1| Triticum aestivum ribosomal protein L13a mRNA, complete cds Length = 666 Score = 436 bits (220), Expect = e-119 Identities = 403/464 (86%) Strand = Plus / Minus Query: 121 tagtacttgattggtgccaggatgtccaactgagaacccagcttctcctctgcagccttc 180 ||||| ||||| || || ||||| |||| ||||| |||| ||||||||| || |||||| Sbjct: 638 tagtatttgatcggggctaggatctccagctgagttcccaacttctcctcggccgccttc 579 Query: 181 tcagccttgacgcgcagcttggccagttgcttcctcctgtcgtaagagaccttggccttc 240 || ||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 578 tcggccttgacgcggagcttcgccagttgctttctcctgtcgtaggagaccttggccttc 519 Query: 241 tccttcctcttctcctccagttccttgatagtttcatggtagttccacccgacctccttg 300 ||||| ||||| |||||||| ||| |||| || || ||||||||| |||||||||||| Sbjct: 518 tcctttctcttttcctccagctccctgatggtgtcggcgtagttccatccgacctccttg 459 Query: 301 gaaagctcgccgagaaggcagtacttatgacccggctgcagcctcagaaccttgagcgcg 360 || |||| |||||| ||||||||| | || || ||||||||||||||||||||||||||| Sbjct: 458 gagagctggccgaggaggcagtacctgtgcccaggctgcagcctcagaaccttgagcgcg 399 Query: 361 tcggggatgaccatacgcttggtgcgatcataaggcggcgggacgccctcgaacgccttc 420 |||||||||||||| |||||||| | || || |||||||||||||||||| ||||||| Sbjct: 398 tcggggatgaccatgcgcttggtcctgtcgtacggcggcgggacgccctcgtacgccttg 339 Query: 421 agcctggcgagcgcagcctcgccgcggggcgtcttgtgcgggatcatgccgcgcacggtg 480 |||||||||||||| |||||||| | | ||||||||||| ||||| ||||| | |||| Sbjct: 338 agcctggcgagcgcggcctcgcccctcgcggtcttgtgcggaatcataccgcggatggtg 279 Query: 481 cgccagaaaattttcgagggggcgcggaagtggatgggaccgtgcgacggcttggtgttc 540 ||||||| || || | |||||||||||||||||||| ||||| || |||||||||||| Sbjct: 278 cgccagaggatcttggccggggcgcggaagtggatggggccgtgggagggcttggtgttc 219 Query: 541 atccgcttgcggaggaagcggaggtacttcatcttctgacggac 584 |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 218 atccgcttgcggaggaagcggaggtacttcatcttctggcggac 175
>dbj|AK106078.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-A04, full insert sequence Length = 1048 Score = 436 bits (220), Expect = e-119 Identities = 385/440 (87%) Strand = Plus / Minus Query: 145 tccaactgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggcc 204 |||| ||||| ||||||||||||||| || ||||||||||||||||| |||||||| ||| Sbjct: 679 tccagctgaggacccagcttctcctcggctgccttctcagccttgacacgcagcttcgcc 620 Query: 205 agttgcttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttcc 264 ||||||||||||||||| || | ||||||||||||||||||||||||||||| || ||| Sbjct: 619 agttgcttcctcctgtcataggcaaccttggccttctccttcctcttctcctcaagctcc 560 Query: 265 ttgatagtttcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtac 324 |||| || |||| ||||||||| || ||||||||||| |||| |||||| ||||||||| Sbjct: 559 ctgatggtgtcatagtagttccagccaacctccttggagagctggccgaggaggcagtac 500 Query: 325 ttatgacccggctgcagcctcagaaccttgagcgcgtcggggatgaccatacgcttggtg 384 || || || ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 499 ttgtgcccaggctgcagcctcagaaccttgagcgcgtcggggatgaccatgcgcttggtc 440 Query: 385 cgatcataaggcggcgggacgccctcgaacgccttcagcctggcgagcgcagcctcgccg 444 | || || |||||||| ||||||||| ||||||||||||| || ||||| ||||| || Sbjct: 439 ctgtcgtacggcggcggcacgccctcgtacgccttcagccttgccagcgccgcctctccc 380 Query: 445 cggggcgtcttgtgcgggatcatgccgcgcacggtgcgccagaaaattttcgagggggcg 504 | ||||||||||||||||||||||| ||||||||||||| || || | ||||| | Sbjct: 379 ctcttggtcttgtgcgggatcatgccgcggacggtgcgccagaggatcttggcgggggag 320 Query: 505 cggaagtggatgggaccgtgcgacggcttggtgttcatccgcttgcggaggaagcggagg 564 |||||||||||||| || || || |||||||||||||||| ||||||||||||||||||| Sbjct: 319 cggaagtggatggggccatgggagggcttggtgttcatcctcttgcggaggaagcggagg 260 Query: 565 tacttcatcttctgacggac 584 |||||||||||||| ||||| Sbjct: 259 tacttcatcttctggcggac 240
>dbj|AK103893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150E09, full insert sequence Length = 943 Score = 436 bits (220), Expect = e-119 Identities = 385/440 (87%) Strand = Plus / Minus Query: 145 tccaactgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggcc 204 |||| ||||| ||||||||||||||| || ||||||||||||||||| |||||||| ||| Sbjct: 679 tccagctgaggacccagcttctcctcggctgccttctcagccttgacacgcagcttcgcc 620 Query: 205 agttgcttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttcc 264 ||||||||||||||||| || | ||||||||||||||||||||||||||||| || ||| Sbjct: 619 agttgcttcctcctgtcataggcaaccttggccttctccttcctcttctcctcaagctcc 560 Query: 265 ttgatagtttcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtac 324 |||| || |||| ||||||||| || ||||||||||| |||| |||||| ||||||||| Sbjct: 559 ctgatggtgtcatagtagttccagccaacctccttggagagctggccgaggaggcagtac 500 Query: 325 ttatgacccggctgcagcctcagaaccttgagcgcgtcggggatgaccatacgcttggtg 384 || || || ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 499 ttgtgcccaggctgcagcctcagaaccttgagcgcgtcggggatgaccatgcgcttggtc 440 Query: 385 cgatcataaggcggcgggacgccctcgaacgccttcagcctggcgagcgcagcctcgccg 444 | || || |||||||| ||||||||| ||||||||||||| || ||||| ||||| || Sbjct: 439 ctgtcgtacggcggcggcacgccctcgtacgccttcagccttgccagcgccgcctctccc 380 Query: 445 cggggcgtcttgtgcgggatcatgccgcgcacggtgcgccagaaaattttcgagggggcg 504 | ||||||||||||||||||||||| ||||||||||||| || || | ||||| | Sbjct: 379 ctcttggtcttgtgcgggatcatgccgcggacggtgcgccagaggatcttggcgggggag 320 Query: 505 cggaagtggatgggaccgtgcgacggcttggtgttcatccgcttgcggaggaagcggagg 564 |||||||||||||| || || || |||||||||||||||| ||||||||||||||||||| Sbjct: 319 cggaagtggatggggccatgggagggcttggtgttcatcctcttgcggaggaagcggagg 260 Query: 565 tacttcatcttctgacggac 584 |||||||||||||| ||||| Sbjct: 259 tacttcatcttctggcggac 240
>gb|BT016389.1| Zea mays clone Contig222 mRNA sequence Length = 880 Score = 418 bits (211), Expect = e-114 Identities = 400/463 (86%) Strand = Plus / Minus Query: 122 agtacttgattggtgccaggatgtccaactgagaacccagcttctcctctgcagccttct 181 |||||||||| || || || || ||||||||||| |||| ||||||||| || ||||||| Sbjct: 678 agtacttgataggggcaagaatctccaactgagaccccaacttctcctcggctgccttct 619 Query: 182 cagccttgacgcgcagcttggccagttgcttcctcctgtcgtaagagaccttggccttct 241 | |||||||| ||||||||||||| ||||||| |||| ||||| | ||||||||||||| Sbjct: 618 cggccttgacacgcagcttggccaattgcttcttcctctcgtaggcaaccttggccttct 559 Query: 242 ccttcctcttctcctccagttccttgatagtttcatggtagttccacccgacctccttgg 301 |||||||||||||||| |||||| |||| || |||||||||||||||||||||||||| | Sbjct: 558 ccttcctcttctcctcaagttccctgatggtgtcatggtagttccacccgacctccttag 499 Query: 302 aaagctcgccgagaaggcagtacttatgacccggctgcagcctcagaaccttgagcgcgt 361 | ||||||||||| ||||||||||| || || ||||| |||||||||||||| || |||| Sbjct: 498 agagctcgccgaggaggcagtacttgtgtccaggctgtagcctcagaaccttaagagcgt 439 Query: 362 cggggatgaccatacgcttggtgcgatcataaggcggcgggacgccctcgaacgccttca 421 | |||||||||||||||||||| || || |||||||||||||||||| ||| ||| | Sbjct: 438 cagggatgaccatacgcttggtcttgtcgtacggcggcgggacgccctcgtacgtcttga 379 Query: 422 gcctggcgagcgcagcctcgccgcggggcgtcttgtgcgggatcatgccgcgcacggtgc 481 |||| || || || ||||| || | ||||||||||| ||||| ||||| | ||||| Sbjct: 378 gcctcgccagagccgcctcccccctcttggtcttgtgcggaatcatcccgcggatggtgc 319 Query: 482 gccagaaaattttcgagggggcgcggaagtggatgggaccgtgcgacggcttggtgttca 541 |||| | || || | ||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 318 gccacaggatcttggcgggggcgcggaagtggatgggcccgtgggacggcttggtgttca 259 Query: 542 tccgcttgcggaggaagcggaggtacttcatcttctgacggac 584 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 258 tccgcttgcggaggaagcggaggtacttcatcttctgacggac 216
>ref|XM_476399.1| Oryza sativa (japonica cultivar-group), mRNA Length = 859 Score = 387 bits (195), Expect = e-104 Identities = 375/435 (86%) Strand = Plus / Minus Query: 150 ctgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggccagttg 209 ||||||||||||||||||||| ||||| |||||||||||||| || ||| | | | ||| Sbjct: 675 ctgagaacccagcttctcctcagcagctttctcagccttgacacgaagccttgttaattg 616 Query: 210 cttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttccttgat 269 ||||||||| ||||| | ||||| ||||||||||| ||||||||||||| |||| |||| Sbjct: 615 cttcctcctctcgtatgcaaccttagccttctcctttctcttctcctccaattccctgat 556 Query: 270 agtttcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatg 329 || || ||||||||||| |||||||||||||| |||| |||||| ||||||||||| || Sbjct: 555 ggtgtcgtggtagttccagccgacctccttggagagctggccgaggaggcagtacttgtg 496 Query: 330 acccggctgcagcctcagaaccttgagcgcgtcggggatgaccatacgcttggtgcgatc 389 || ||||| || | ||||||||||| |||||||||| |||||| ||||||||||| || Sbjct: 495 gccgggctggaggcgaagaaccttgagggcgtcggggacgaccatgcgcttggtgcggtc 436 Query: 390 ataaggcggcgggacgccctcgaacgccttcagcctggcgagcgcagcctcgccgcgggg 449 || || || |||||||| ||||| ||||| || ||||||| || |||||||||||||| Sbjct: 435 gtagggaggggggacgccgtcgaaggccttgaggttggcgagggcggcctcgccgcgggg 376 Query: 450 cgtcttgtgcgggatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaa 509 |||||||| |||||||||||||| |||||||||||||| || |||||||||||||| Sbjct: 375 ggtcttgtgggggatcatgccgcggacggtgcgccagaagatgcgggagggggcgcggaa 316 Query: 510 gtggatgggaccgtgcgacggcttggtgttcatccgcttgcggaggaagcggaggtactt 569 ||||||||| || || || ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 315 gtggatggggccatgggagggcttggtgttcatccgcttgcggaggaaccggaggtactt 256 Query: 570 catcttctgacggac 584 ||||||||| ||||| Sbjct: 255 catcttctgccggac 241
>ref|XM_506141.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1567_G09.119 mRNA Length = 863 Score = 387 bits (195), Expect = e-104 Identities = 375/435 (86%) Strand = Plus / Minus Query: 150 ctgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggccagttg 209 ||||||||||||||||||||| ||||| |||||||||||||| || ||| | | | ||| Sbjct: 679 ctgagaacccagcttctcctcagcagctttctcagccttgacacgaagccttgttaattg 620 Query: 210 cttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttccttgat 269 ||||||||| ||||| | ||||| ||||||||||| ||||||||||||| |||| |||| Sbjct: 619 cttcctcctctcgtatgcaaccttagccttctcctttctcttctcctccaattccctgat 560 Query: 270 agtttcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatg 329 || || ||||||||||| |||||||||||||| |||| |||||| ||||||||||| || Sbjct: 559 ggtgtcgtggtagttccagccgacctccttggagagctggccgaggaggcagtacttgtg 500 Query: 330 acccggctgcagcctcagaaccttgagcgcgtcggggatgaccatacgcttggtgcgatc 389 || ||||| || | ||||||||||| |||||||||| |||||| ||||||||||| || Sbjct: 499 gccgggctggaggcgaagaaccttgagggcgtcggggacgaccatgcgcttggtgcggtc 440 Query: 390 ataaggcggcgggacgccctcgaacgccttcagcctggcgagcgcagcctcgccgcgggg 449 || || || |||||||| ||||| ||||| || ||||||| || |||||||||||||| Sbjct: 439 gtagggaggggggacgccgtcgaaggccttgaggttggcgagggcggcctcgccgcgggg 380 Query: 450 cgtcttgtgcgggatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaa 509 |||||||| |||||||||||||| |||||||||||||| || |||||||||||||| Sbjct: 379 ggtcttgtgggggatcatgccgcggacggtgcgccagaagatgcgggagggggcgcggaa 320 Query: 510 gtggatgggaccgtgcgacggcttggtgttcatccgcttgcggaggaagcggaggtactt 569 ||||||||| || || || ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 319 gtggatggggccatgggagggcttggtgttcatccgcttgcggaggaaccggaggtactt 260 Query: 570 catcttctgacggac 584 ||||||||| ||||| Sbjct: 259 catcttctgccggac 245
>dbj|AK103048.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117G12, full insert sequence Length = 859 Score = 387 bits (195), Expect = e-104 Identities = 375/435 (86%) Strand = Plus / Minus Query: 150 ctgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggccagttg 209 ||||||||||||||||||||| ||||| |||||||||||||| || ||| | | | ||| Sbjct: 675 ctgagaacccagcttctcctcagcagctttctcagccttgacacgaagccttgttaattg 616 Query: 210 cttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttccttgat 269 ||||||||| ||||| | ||||| ||||||||||| ||||||||||||| |||| |||| Sbjct: 615 cttcctcctctcgtatgcaaccttagccttctcctttctcttctcctccaattccctgat 556 Query: 270 agtttcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatg 329 || || ||||||||||| |||||||||||||| |||| |||||| ||||||||||| || Sbjct: 555 ggtgtcgtggtagttccagccgacctccttggagagctggccgaggaggcagtacttgtg 496 Query: 330 acccggctgcagcctcagaaccttgagcgcgtcggggatgaccatacgcttggtgcgatc 389 || ||||| || | ||||||||||| |||||||||| |||||| ||||||||||| || Sbjct: 495 gccgggctggaggcgaagaaccttgagggcgtcggggacgaccatgcgcttggtgcggtc 436 Query: 390 ataaggcggcgggacgccctcgaacgccttcagcctggcgagcgcagcctcgccgcgggg 449 || || || |||||||| ||||| ||||| || ||||||| || |||||||||||||| Sbjct: 435 gtagggaggggggacgccgtcgaaggccttgaggttggcgagggcggcctcgccgcgggg 376 Query: 450 cgtcttgtgcgggatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaa 509 |||||||| |||||||||||||| |||||||||||||| || |||||||||||||| Sbjct: 375 ggtcttgtgggggatcatgccgcggacggtgcgccagaagatgcgggagggggcgcggaa 316 Query: 510 gtggatgggaccgtgcgacggcttggtgttcatccgcttgcggaggaagcggaggtactt 569 ||||||||| || || || ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 315 gtggatggggccatgggagggcttggtgttcatccgcttgcggaggaaccggaggtactt 256 Query: 570 catcttctgacggac 584 ||||||||| ||||| Sbjct: 255 catcttctgccggac 241
>dbj|AK063806.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-G03, full insert sequence Length = 863 Score = 387 bits (195), Expect = e-104 Identities = 375/435 (86%) Strand = Plus / Minus Query: 150 ctgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggccagttg 209 ||||||||||||||||||||| ||||| |||||||||||||| || ||| | | | ||| Sbjct: 679 ctgagaacccagcttctcctcagcagctttctcagccttgacacgaagccttgttaattg 620 Query: 210 cttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttccttgat 269 ||||||||| ||||| | ||||| ||||||||||| ||||||||||||| |||| |||| Sbjct: 619 cttcctcctctcgtatgcaaccttagccttctcctttctcttctcctccaattccctgat 560 Query: 270 agtttcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatg 329 || || ||||||||||| |||||||||||||| |||| |||||| ||||||||||| || Sbjct: 559 ggtgtcgtggtagttccagccgacctccttggagagctggccgaggaggcagtacttgtg 500 Query: 330 acccggctgcagcctcagaaccttgagcgcgtcggggatgaccatacgcttggtgcgatc 389 || ||||| || | ||||||||||| |||||||||| |||||| ||||||||||| || Sbjct: 499 gccgggctggaggcgaagaaccttgagggcgtcggggacgaccatgcgcttggtgcggtc 440 Query: 390 ataaggcggcgggacgccctcgaacgccttcagcctggcgagcgcagcctcgccgcgggg 449 || || || |||||||| ||||| ||||| || ||||||| || |||||||||||||| Sbjct: 439 gtagggaggggggacgccgtcgaaggccttgaggttggcgagggcggcctcgccgcgggg 380 Query: 450 cgtcttgtgcgggatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaa 509 |||||||| |||||||||||||| |||||||||||||| || |||||||||||||| Sbjct: 379 ggtcttgtgggggatcatgccgcggacggtgcgccagaagatgcgggagggggcgcggaa 320 Query: 510 gtggatgggaccgtgcgacggcttggtgttcatccgcttgcggaggaagcggaggtactt 569 ||||||||| || || || ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 319 gtggatggggccatgggagggcttggtgttcatccgcttgcggaggaaccggaggtactt 260 Query: 570 catcttctgacggac 584 ||||||||| ||||| Sbjct: 259 catcttctgccggac 245
>gb|BT017778.1| Zea mays clone EL01N0503C05.c mRNA sequence Length = 826 Score = 291 bits (147), Expect = 1e-75 Identities = 336/399 (84%) Strand = Plus / Minus Query: 180 ctcagccttgacgcgcagcttggccagttgcttcctcctgtcgtaagagaccttggcctt 239 ||||||||| | ||||||||||||||| ||||||||||| || || | ||||| ||||| Sbjct: 609 ctcagcctttaggcgcagcttggccagctgcttcctcctctcataggccaccttagcctt 550 Query: 240 ctccttcctcttctcctccagttccttgatagtttcatggtagttccacccgacctcctt 299 |||||||||||||||||| || ||| |||| || |||||||||||||| ||||||||||| Sbjct: 549 ctccttcctcttctcctcaagctccctgatggtgtcatggtagttccatccgacctcctt 490 Query: 300 ggaaagctcgccgagaaggcagtacttatgacccggctgcagcctcagaaccttgagcgc 359 |||||||| || || ||||||||||| || || || ||||||||||||||||| || || Sbjct: 489 agaaagctccccaaggaggcagtacttgtgtcctggttgcagcctcagaaccttaagagc 430 Query: 360 gtcggggatgaccatacgcttggtgcgatcataaggcggcgggacgccctcgaacgcctt 419 ||| |||||||||| |||||||| || || |||||||||||||||||| ||| ||| Sbjct: 429 gtcagggatgaccaggcgcttggtcttgtcgtacggcggcgggacgccctcgtacgtctt 370 Query: 420 cagcctggcgagcgcagcctcgccgcggggcgtcttgtgcgggatcatgccgcgcacggt 479 ||||| || || || ||||| || | ||||||||||| ||||| ||||| | ||| Sbjct: 369 gagcctcgccagagccgcctcccccctcttggtcttgtgcggaatcatcccgcggatggt 310 Query: 480 gcgccagaaaattttcgagggggcgcggaagtggatgggaccgtgcgacggcttggtgtt 539 |||||| | || || || |||||||||||||||||||| || || || ||||||||||| Sbjct: 309 gcgccacaggatcttggacggggcgcggaagtggatgggcccatgggatggcttggtgtt 250 Query: 540 catccgcttgcggaggaagcggaggtacttcatcttctg 578 ||||||||||||||| ||||||||||||||||||||||| Sbjct: 249 catccgcttgcggagaaagcggaggtacttcatcttctg 211
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 234 bits (118), Expect = 3e-58 Identities = 205/234 (87%) Strand = Plus / Plus Query: 351 cttgagcgcgtcggggatgaccatacgcttggtgcgatcataaggcggcgggacgccctc 410 |||||| |||||||||| |||||| ||||||||||| || || || || |||||||| || Sbjct: 524288 cttgagggcgtcggggacgaccatgcgcttggtgcggtcgtagggaggggggacgccgtc 524347 Query: 411 gaacgccttcagcctggcgagcgcagcctcgccgcggggcgtcttgtgcgggatcatgcc 470 ||| ||||| || ||||||| || |||||||||||||| |||||||| ||||||||||| Sbjct: 524348 gaaggccttgaggttggcgagggcggcctcgccgcggggggtcttgtgggggatcatgcc 524407 Query: 471 gcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccgtgcgacgg 530 ||| |||||||||||||| || ||||||||||||||||||||||| || || || || Sbjct: 524408 gcggacggtgcgccagaagatgcgggagggggcgcggaagtggatggggccatgggaggg 524467 Query: 531 cttggtgttcatccgcttgcggaggaagcggaggtacttcatcttctgacggac 584 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 524468 cttggtgttcatccgcttgcggaggaaccggaggtacttcatcttctgccggac 524521 Score = 103 bits (52), Expect = 6e-19 Identities = 100/116 (86%) Strand = Plus / Plus Query: 150 ctgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggccagttg 209 ||||||||||||||||||||| ||||| |||||||||||||| || ||| | | | ||| Sbjct: 522950 ctgagaacccagcttctcctcagcagctttctcagccttgacacgaagccttgttaattg 523009 Query: 210 cttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttcct 265 ||||||||| ||||| | ||||| ||||||||||| ||||||||||||| ||||| Sbjct: 523010 cttcctcctctcgtatgcaaccttagccttctcctttctcttctcctccaattcct 523065 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 277 tggtagttccacccgacctccttggaaagctcgccgagaaggcagtactt 326 ||||||||||| |||||||||||||| |||| |||||| ||||||||||| Sbjct: 524138 tggtagttccagccgacctccttggagagctggccgaggaggcagtactt 524187
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 234 bits (118), Expect = 3e-58 Identities = 205/234 (87%) Strand = Plus / Plus Query: 351 cttgagcgcgtcggggatgaccatacgcttggtgcgatcataaggcggcgggacgccctc 410 |||||| |||||||||| |||||| ||||||||||| || || || || |||||||| || Sbjct: 126452 cttgagggcgtcggggacgaccatgcgcttggtgcggtcgtagggaggggggacgccgtc 126511 Query: 411 gaacgccttcagcctggcgagcgcagcctcgccgcggggcgtcttgtgcgggatcatgcc 470 ||| ||||| || ||||||| || |||||||||||||| |||||||| ||||||||||| Sbjct: 126512 gaaggccttgaggttggcgagggcggcctcgccgcggggggtcttgtgggggatcatgcc 126571 Query: 471 gcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccgtgcgacgg 530 ||| |||||||||||||| || ||||||||||||||||||||||| || || || || Sbjct: 126572 gcggacggtgcgccagaagatgcgggagggggcgcggaagtggatggggccatgggaggg 126631 Query: 531 cttggtgttcatccgcttgcggaggaagcggaggtacttcatcttctgacggac 584 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 126632 cttggtgttcatccgcttgcggaggaaccggaggtacttcatcttctgccggac 126685 Score = 103 bits (52), Expect = 6e-19 Identities = 100/116 (86%) Strand = Plus / Plus Query: 150 ctgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggccagttg 209 ||||||||||||||||||||| ||||| |||||||||||||| || ||| | | | ||| Sbjct: 125114 ctgagaacccagcttctcctcagcagctttctcagccttgacacgaagccttgttaattg 125173 Query: 210 cttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttcct 265 ||||||||| ||||| | ||||| ||||||||||| ||||||||||||| ||||| Sbjct: 125174 cttcctcctctcgtatgcaaccttagccttctcctttctcttctcctccaattcct 125229 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 277 tggtagttccacccgacctccttggaaagctcgccgagaaggcagtactt 326 ||||||||||| |||||||||||||| |||| |||||| ||||||||||| Sbjct: 126302 tggtagttccagccgacctccttggagagctggccgaggaggcagtactt 126351
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 234 bits (118), Expect = 3e-58 Identities = 205/234 (87%) Strand = Plus / Plus Query: 351 cttgagcgcgtcggggatgaccatacgcttggtgcgatcataaggcggcgggacgccctc 410 |||||| |||||||||| |||||| ||||||||||| || || || || |||||||| || Sbjct: 78200 cttgagggcgtcggggacgaccatgcgcttggtgcggtcgtagggaggggggacgccgtc 78259 Query: 411 gaacgccttcagcctggcgagcgcagcctcgccgcggggcgtcttgtgcgggatcatgcc 470 ||| ||||| || ||||||| || |||||||||||||| |||||||| ||||||||||| Sbjct: 78260 gaaggccttgaggttggcgagggcggcctcgccgcggggggtcttgtgggggatcatgcc 78319 Query: 471 gcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccgtgcgacgg 530 ||| |||||||||||||| || ||||||||||||||||||||||| || || || || Sbjct: 78320 gcggacggtgcgccagaagatgcgggagggggcgcggaagtggatggggccatgggaggg 78379 Query: 531 cttggtgttcatccgcttgcggaggaagcggaggtacttcatcttctgacggac 584 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 78380 cttggtgttcatccgcttgcggaggaaccggaggtacttcatcttctgccggac 78433 Score = 103 bits (52), Expect = 6e-19 Identities = 100/116 (86%) Strand = Plus / Plus Query: 150 ctgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggccagttg 209 ||||||||||||||||||||| ||||| |||||||||||||| || ||| | | | ||| Sbjct: 76862 ctgagaacccagcttctcctcagcagctttctcagccttgacacgaagccttgttaattg 76921 Query: 210 cttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttcct 265 ||||||||| ||||| | ||||| ||||||||||| ||||||||||||| ||||| Sbjct: 76922 cttcctcctctcgtatgcaaccttagccttctcctttctcttctcctccaattcct 76977 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 277 tggtagttccacccgacctccttggaaagctcgccgagaaggcagtactt 326 ||||||||||| |||||||||||||| |||| |||||| ||||||||||| Sbjct: 78050 tggtagttccagccgacctccttggagagctggccgaggaggcagtactt 78099
>ref|XM_469811.1| Oryza sativa (japonica cultivar-group), mRNA Length = 947 Score = 220 bits (111), Expect = 4e-54 Identities = 231/271 (85%) Strand = Plus / Minus Query: 274 tcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgaccc 333 |||| ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || Sbjct: 389 tcatagtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgccca 330 Query: 334 ggctgcagcctcagaaccttgagcgcgtcggggatgaccatacgcttggtgcgatcataa 393 ||||||||||||||||||||||||||||||||||||||||| |||||||| | || || Sbjct: 329 ggctgcagcctcagaaccttgagcgcgtcggggatgaccatgcgcttggtcctgtcgtac 270 Query: 394 ggcggcgggacgccctcgaacgccttcagcctggcgagcgcagcctcgccgcggggcgtc 453 ||||||| ||| ||||| ||||||||||||| || ||||| ||||| || | ||| Sbjct: 269 ggcggcgtcacgacctcgtacgccttcagccttgccagcgccgcctctcccctcttggtc 210 Query: 454 ttgtgcgggatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtgg 513 |||||||||||||||||||| ||||||||||||| || || | ||||| |||||||||| Sbjct: 209 ttgtgcgggatcatgccgcggacggtgcgccagaggatcttggcgggggagcggaagtgg 150 Query: 514 atgggaccgtgcgacggcttggtgttcatcc 544 ||||| || || || |||||||||||||||| Sbjct: 149 atggggccatgggagggcttggtgttcatcc 119
>dbj|AK066603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071H21, full insert sequence Length = 2212 Score = 170 bits (86), Expect = 3e-39 Identities = 143/162 (88%) Strand = Plus / Minus Query: 279 gtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgacccggctg 338 ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || ||||| Sbjct: 576 gtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgcccaggctg 517 Query: 339 cagcctcagaaccttgagcgcgtcggggatgaccatacgcttggtgcgatcataaggcgg 398 |||||||||||||||||||||||||||||||||||| |||||||| | || || ||||| Sbjct: 516 cagcctcagaaccttgagcgcgtcggggatgaccatgcgcttggtcctgtcgtacggcgg 457 Query: 399 cgggacgccctcgaacgccttcagcctggcgagcgcagcctc 440 ||| ||||||||| ||||||||||||| || ||||| ||||| Sbjct: 456 cggcacgccctcgtacgccttcagccttgccagcgccgcctc 415
>gb|AY109365.1| Zea mays CL4861_1 mRNA sequence Length = 1506 Score = 163 bits (82), Expect = 8e-37 Identities = 121/134 (90%) Strand = Plus / Minus Query: 451 gtcttgtgcgggatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaag 510 ||||||||||| ||||| ||||| | ||||||||| | || || | |||||||||||| Sbjct: 837 gtcttgtgcggaatcatcccgcggatggtgcgccacaggatcttggccggggcgcggaag 778 Query: 511 tggatgggaccgtgcgacggcttggtgttcatccgcttgcggaggaagcggaggtacttc 570 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 777 tggatggggccgtgggacggcttggtgttcatccgcttgcggaggaagcggaggtacttc 718 Query: 571 atcttctgacggac 584 |||||||||||||| Sbjct: 717 atcttctgacggac 704 Score = 155 bits (78), Expect = 2e-34 Identities = 144/166 (86%) Strand = Plus / Minus Query: 260 gttccttgatagtttcatggtagttccacccgacctccttggaaagctcgccgagaaggc 319 ||||| |||| || |||||||||||||||||||||||||| || ||||||||||| |||| Sbjct: 1028 gttccctgatggtgtcatggtagttccacccgacctccttagagagctcgccgaggaggc 969 Query: 320 agtacttatgacccggctgcagcctcagaaccttgagcgcgtcggggatgaccatacgct 379 ||||||| || || ||||| |||||||||||||| || ||||| |||||||||||||||| Sbjct: 968 agtacttgtgtccaggctgtagcctcagaaccttaagagcgtcagggatgaccatacgct 909 Query: 380 tggtgcgatcataaggcggcgggacgccctcgaacgccttcagcct 425 |||| || || |||||||||||||||||| ||| ||| ||||| Sbjct: 908 tggtcttgtcgtacggcggcgggacgccctcgtacgtcttgagcct 863 Score = 93.7 bits (47), Expect = 6e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 122 agtacttgattggtgccaggatgtccaactgagaacccagcttctcctctgcagccttct 181 |||||||||| || || || || ||||||||||| |||| ||||||||| || ||||||| Sbjct: 1166 agtacttgataggggcaagaatctccaactgagaccccaacttctcctcggctgccttct 1107 Query: 182 cagccttgacgcgcagcttggccagttgcttcctcctgtcgta 224 | |||||||| ||||||||||||| ||||||| |||| ||||| Sbjct: 1106 cggccttgacacgcagcttggccaattgcttcttcctctcgta 1064
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 145 bits (73), Expect = 2e-31 Identities = 103/113 (91%) Strand = Plus / Minus Query: 145 tccaactgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggcc 204 |||| ||||| ||||||||||||||| || ||||||||||||||||| |||||||| ||| Sbjct: 30901100 tccagctgaggacccagcttctcctcggctgccttctcagccttgacacgcagcttcgcc 30901041 Query: 205 agttgcttcctcctgtcgtaagagaccttggccttctccttcctcttctcctc 257 ||||||||||||||||| || | ||||||||||||||||||||||||||||| Sbjct: 30901040 agttgcttcctcctgtcataggcaaccttggccttctccttcctcttctcctc 30900988 Score = 127 bits (64), Expect = 4e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 469 ccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccgtgcgac 528 ||||| ||||||||||||| || || | ||||| ||||||||||||||| || || || Sbjct: 30899750 ccgcggacggtgcgccagaggatcttggcgggggagcggaagtggatggggccatgggag 30899691 Query: 529 ggcttggtgttcatccgcttgcggaggaagcggaggtacttcatcttctgacggac 584 |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 30899690 ggcttggtgttcatcctcttgcggaggaagcggaggtacttcatcttctggcggac 30899635 Score = 111 bits (56), Expect = 3e-21 Identities = 102/116 (87%), Gaps = 1/116 (0%) Strand = Plus / Plus Query: 469 ccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccgtgcgac 528 ||||| ||||||||||||| || || | ||||| ||||||||||||||| || || || Sbjct: 30886558 ccgcggacggtgcgccagaggatcttggcgggggagcggaagtggatggggccatgggag 30886617 Query: 529 ggcttggtgttcatccgcttgcggaggaagcggaggtacttcatcttctgacggac 584 |||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||| Sbjct: 30886618 ggcttggtgttcatcctctt-cggaggaagcggaggtacttcatcttctggcggac 30886672 Score = 93.7 bits (47), Expect = 6e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 351 cttgagcgcgtcggggatgaccatacgcttggtgcgatcataaggcggcgggacgccctc 410 |||||||||||||||||||||||| |||||||| | || || |||||||| |||||||| Sbjct: 30899966 cttgagcgcgtcggggatgaccatgcgcttggtcctgtcgtacggcggcggcacgccctc 30899907 Query: 411 gaacgccttcagcctggcgagcgcagcctcgccgcggggcgtcttgtgcgggatcatgc 469 | ||||||||||||| || ||||| ||||| || | ||||||||||||||||||| Sbjct: 30899906 gtacgccttcagccttgccagcgccgcctctcccctcttggtcttgtgcgggatcatgc 30899848 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 274 tcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgaccc 333 |||| ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || Sbjct: 30900135 tcatagtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgccca 30900076 Query: 334 ggctgcagcctcagaacc 351 |||||||||||||||||| Sbjct: 30900075 ggctgcagcctcagaacc 30900058 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 274 tcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgaccc 333 |||| ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || Sbjct: 30886147 tcatagtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgccca 30886206 Query: 334 ggctgcagcctcagaacc 351 |||||||||||||||||| Sbjct: 30886207 ggctgcagcctcagaacc 30886224 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 351 cttgagcgcgtcggggatgaccatacgcttggtgcgatcataaggcggcgggacgccctc 410 |||||||||||||||||||||||| |||||||| | || || ||||||| ||| |||| Sbjct: 30886326 cttgagcgcgtcggggatgaccatgcgcttggtcctgtcgtacggcggcgtcacgacctc 30886385 Query: 411 gaacgccttcagcctggcgagcgcagcctcgccgcggggcgtcttgtgcgggatcatgc 469 | ||||||||||||| || ||||| ||||| || | ||||||||||||||||||| Sbjct: 30886386 gtacgccttcagccttgccagcgccgcctctcccctcttggtcttgtgcgggatcatgc 30886444 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 gccttctccttcctcttctcctcc 258 |||||| ||||||||||||||||| Sbjct: 34372674 gccttcaccttcctcttctcctcc 34372697
>gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete sequence Length = 122496 Score = 145 bits (73), Expect = 2e-31 Identities = 103/113 (91%) Strand = Plus / Plus Query: 145 tccaactgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggcc 204 |||| ||||| ||||||||||||||| || ||||||||||||||||| |||||||| ||| Sbjct: 41990 tccagctgaggacccagcttctcctcggctgccttctcagccttgacacgcagcttcgcc 42049 Query: 205 agttgcttcctcctgtcgtaagagaccttggccttctccttcctcttctcctc 257 ||||||||||||||||| || | ||||||||||||||||||||||||||||| Sbjct: 42050 agttgcttcctcctgtcataggcaaccttggccttctccttcctcttctcctc 42102 Score = 127 bits (64), Expect = 4e-26 Identities = 103/116 (88%) Strand = Plus / Plus Query: 469 ccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccgtgcgac 528 ||||| ||||||||||||| || || | ||||| ||||||||||||||| || || || Sbjct: 43340 ccgcggacggtgcgccagaggatcttggcgggggagcggaagtggatggggccatgggag 43399 Query: 529 ggcttggtgttcatccgcttgcggaggaagcggaggtacttcatcttctgacggac 584 |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 43400 ggcttggtgttcatcctcttgcggaggaagcggaggtacttcatcttctggcggac 43455 Score = 111 bits (56), Expect = 3e-21 Identities = 102/116 (87%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 469 ccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccgtgcgac 528 ||||| ||||||||||||| || || | ||||| ||||||||||||||| || || || Sbjct: 56532 ccgcggacggtgcgccagaggatcttggcgggggagcggaagtggatggggccatgggag 56473 Query: 529 ggcttggtgttcatccgcttgcggaggaagcggaggtacttcatcttctgacggac 584 |||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||| Sbjct: 56472 ggcttggtgttcatcctctt-cggaggaagcggaggtacttcatcttctggcggac 56418 Score = 93.7 bits (47), Expect = 6e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 351 cttgagcgcgtcggggatgaccatacgcttggtgcgatcataaggcggcgggacgccctc 410 |||||||||||||||||||||||| |||||||| | || || |||||||| |||||||| Sbjct: 43124 cttgagcgcgtcggggatgaccatgcgcttggtcctgtcgtacggcggcggcacgccctc 43183 Query: 411 gaacgccttcagcctggcgagcgcagcctcgccgcggggcgtcttgtgcgggatcatgc 469 | ||||||||||||| || ||||| ||||| || | ||||||||||||||||||| Sbjct: 43184 gtacgccttcagccttgccagcgccgcctctcccctcttggtcttgtgcgggatcatgc 43242 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 274 tcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgaccc 333 |||| ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || Sbjct: 56943 tcatagtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgccca 56884 Query: 334 ggctgcagcctcagaacc 351 |||||||||||||||||| Sbjct: 56883 ggctgcagcctcagaacc 56866 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 274 tcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgaccc 333 |||| ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || Sbjct: 42955 tcatagtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgccca 43014 Query: 334 ggctgcagcctcagaacc 351 |||||||||||||||||| Sbjct: 43015 ggctgcagcctcagaacc 43032 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 351 cttgagcgcgtcggggatgaccatacgcttggtgcgatcataaggcggcgggacgccctc 410 |||||||||||||||||||||||| |||||||| | || || ||||||| ||| |||| Sbjct: 56764 cttgagcgcgtcggggatgaccatgcgcttggtcctgtcgtacggcggcgtcacgacctc 56705 Query: 411 gaacgccttcagcctggcgagcgcagcctcgccgcggggcgtcttgtgcgggatcatgc 469 | ||||||||||||| || ||||| ||||| || | ||||||||||||||||||| Sbjct: 56704 gtacgccttcagccttgccagcgccgcctctcccctcttggtcttgtgcgggatcatgc 56646
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 145 bits (73), Expect = 2e-31 Identities = 103/113 (91%) Strand = Plus / Minus Query: 145 tccaactgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggcc 204 |||| ||||| ||||||||||||||| || ||||||||||||||||| |||||||| ||| Sbjct: 30991623 tccagctgaggacccagcttctcctcggctgccttctcagccttgacacgcagcttcgcc 30991564 Query: 205 agttgcttcctcctgtcgtaagagaccttggccttctccttcctcttctcctc 257 ||||||||||||||||| || | ||||||||||||||||||||||||||||| Sbjct: 30991563 agttgcttcctcctgtcataggcaaccttggccttctccttcctcttctcctc 30991511 Score = 127 bits (64), Expect = 4e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 469 ccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccgtgcgac 528 ||||| ||||||||||||| || || | ||||| ||||||||||||||| || || || Sbjct: 30990273 ccgcggacggtgcgccagaggatcttggcgggggagcggaagtggatggggccatgggag 30990214 Query: 529 ggcttggtgttcatccgcttgcggaggaagcggaggtacttcatcttctgacggac 584 |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 30990213 ggcttggtgttcatcctcttgcggaggaagcggaggtacttcatcttctggcggac 30990158 Score = 111 bits (56), Expect = 3e-21 Identities = 102/116 (87%), Gaps = 1/116 (0%) Strand = Plus / Plus Query: 469 ccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccgtgcgac 528 ||||| ||||||||||||| || || | ||||| ||||||||||||||| || || || Sbjct: 30977081 ccgcggacggtgcgccagaggatcttggcgggggagcggaagtggatggggccatgggag 30977140 Query: 529 ggcttggtgttcatccgcttgcggaggaagcggaggtacttcatcttctgacggac 584 |||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||| Sbjct: 30977141 ggcttggtgttcatcctctt-cggaggaagcggaggtacttcatcttctggcggac 30977195 Score = 93.7 bits (47), Expect = 6e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 351 cttgagcgcgtcggggatgaccatacgcttggtgcgatcataaggcggcgggacgccctc 410 |||||||||||||||||||||||| |||||||| | || || |||||||| |||||||| Sbjct: 30990489 cttgagcgcgtcggggatgaccatgcgcttggtcctgtcgtacggcggcggcacgccctc 30990430 Query: 411 gaacgccttcagcctggcgagcgcagcctcgccgcggggcgtcttgtgcgggatcatgc 469 | ||||||||||||| || ||||| ||||| || | ||||||||||||||||||| Sbjct: 30990429 gtacgccttcagccttgccagcgccgcctctcccctcttggtcttgtgcgggatcatgc 30990371 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 274 tcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgaccc 333 |||| ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || Sbjct: 30990658 tcatagtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgccca 30990599 Query: 334 ggctgcagcctcagaacc 351 |||||||||||||||||| Sbjct: 30990598 ggctgcagcctcagaacc 30990581 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 274 tcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgaccc 333 |||| ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || Sbjct: 30976670 tcatagtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgccca 30976729 Query: 334 ggctgcagcctcagaacc 351 |||||||||||||||||| Sbjct: 30976730 ggctgcagcctcagaacc 30976747 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 351 cttgagcgcgtcggggatgaccatacgcttggtgcgatcataaggcggcgggacgccctc 410 |||||||||||||||||||||||| |||||||| | || || ||||||| ||| |||| Sbjct: 30976849 cttgagcgcgtcggggatgaccatgcgcttggtcctgtcgtacggcggcgtcacgacctc 30976908 Query: 411 gaacgccttcagcctggcgagcgcagcctcgccgcggggcgtcttgtgcgggatcatgc 469 | ||||||||||||| || ||||| ||||| || | ||||||||||||||||||| Sbjct: 30976909 gtacgccttcagccttgccagcgccgcctctcccctcttggtcttgtgcgggatcatgc 30976967 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 gccttctccttcctcttctcctcc 258 |||||| ||||||||||||||||| Sbjct: 34463146 gccttcaccttcctcttctcctcc 34463169
>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence Length = 142376 Score = 137 bits (69), Expect = 5e-29 Identities = 102/113 (90%) Strand = Plus / Minus Query: 145 tccaactgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggcc 204 |||| |||||| |||||||||||||| || | ||||||||||||||| |||||||||||| Sbjct: 70452 tccagctgagatcccagcttctcctcggctgtcttctcagccttgacacgcagcttggcc 70393 Query: 205 agttgcttcctcctgtcgtaagagaccttggccttctccttcctcttctcctc 257 |||||||||||||| || || | ||||||||||||||||||||||||||||| Sbjct: 70392 agttgcttcctcctctcataggcaaccttggccttctccttcctcttctcctc 70340 Score = 125 bits (63), Expect = 2e-25 Identities = 81/87 (93%) Strand = Plus / Minus Query: 498 gggggcgcggaagtggatgggaccgtgcgacggcttggtgttcatccgcttgcggaggaa 557 |||||| |||||||| ||||| ||||| ||||||||||||||||||| |||||||||||| Sbjct: 69122 gggggcacggaagtgaatggggccgtgagacggcttggtgttcatcctcttgcggaggaa 69063 Query: 558 gcggaggtacttcatcttctgacggac 584 ||||||||||||||||||||| ||||| Sbjct: 69062 gcggaggtacttcatcttctggcggac 69036 Score = 99.6 bits (50), Expect = 1e-17 Identities = 71/78 (91%) Strand = Plus / Minus Query: 274 tcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgaccc 333 |||||||||||||| ||||||||||| || ||||||||||| ||||||||||| || || Sbjct: 69543 tcatggtagttccatccgacctccttagagagctcgccgaggaggcagtacttgtgccca 69484 Query: 334 ggctgcagcctcagaacc 351 |||||||||||||||||| Sbjct: 69483 ggctgcagcctcagaacc 69466
>gb|AY013245.2| Oryza sativa (japonica cultivar-group) chromosome 3 BAC 36I5, partial sequence Length = 65547 Score = 111 bits (56), Expect = 3e-21 Identities = 102/116 (87%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 469 ccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccgtgcgac 528 ||||| ||||||||||||| || || | ||||| ||||||||||||||| || || || Sbjct: 54558 ccgcggacggtgcgccagaggatcttggcgggggagcggaagtggatggggccatgggag 54499 Query: 529 ggcttggtgttcatccgcttgcggaggaagcggaggtacttcatcttctgacggac 584 |||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||| Sbjct: 54498 ggcttggtgttcatcctctt-cggaggaagcggaggtacttcatcttctggcggac 54444 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 274 tcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgaccc 333 |||| ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || Sbjct: 54969 tcatagtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgccca 54910 Query: 334 ggctgcagcctcagaacc 351 |||||||||||||||||| Sbjct: 54909 ggctgcagcctcagaacc 54892 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 351 cttgagcgcgtcggggatgaccatacgcttggtgcgatcataaggcggcgggacgccctc 410 |||||||||||||||||||||||| |||||||| | || || ||||||| ||| |||| Sbjct: 54790 cttgagcgcgtcggggatgaccatgcgcttggtcctgtcgtacggcggcgtcacgacctc 54731 Query: 411 gaacgccttcagcctggcgagcgcagcctcgccgcggggcgtcttgtgcgggatcatgc 469 | ||||||||||||| || ||||| ||||| || | ||||||||||||||||||| Sbjct: 54730 gtacgccttcagccttgccagcgccgcctctcccctcttggtcttgtgcgggatcatgc 54672
>gb|AC146913.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0013C12 map near S6115, complete sequence Length = 123718 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Minus Query: 351 cttgagcgcgtcggggatgaccatacgcttggtgcgatcataaggcggcgggacgccctc 410 |||||||||||||||||||||||| |||||||| | || || |||||||| |||||||| Sbjct: 110257 cttgagcgcgtcggggatgaccatgcgcttggtcctgtcgtacggcggcggcacgccctc 110198 Query: 411 gaacgccttcagcctggcgagcgcagcctc 440 | ||||||||||||| || ||||| ||||| Sbjct: 110197 gtacgccttcagccttgccagcgccgcctc 110168 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 279 gtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgacccggctg 338 ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || ||||| Sbjct: 110430 gtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgcccaggctg 110371 Query: 339 cagcctcagaacc 351 ||||||||||||| Sbjct: 110370 cagcctcagaacc 110358
>gb|AC145327.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0095J10 map near S6115, complete sequence Length = 123717 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Minus Query: 351 cttgagcgcgtcggggatgaccatacgcttggtgcgatcataaggcggcgggacgccctc 410 |||||||||||||||||||||||| |||||||| | || || |||||||| |||||||| Sbjct: 14846 cttgagcgcgtcggggatgaccatgcgcttggtcctgtcgtacggcggcggcacgccctc 14787 Query: 411 gaacgccttcagcctggcgagcgcagcctc 440 | ||||||||||||| || ||||| ||||| Sbjct: 14786 gtacgccttcagccttgccagcgccgcctc 14757 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 279 gtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgacccggctg 338 ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || ||||| Sbjct: 15019 gtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgcccaggctg 14960 Query: 339 cagcctcagaacc 351 ||||||||||||| Sbjct: 14959 cagcctcagaacc 14947
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Minus Query: 351 cttgagcgcgtcggggatgaccatacgcttggtgcgatcataaggcggcgggacgccctc 410 |||||||||||||||||||||||| |||||||| | || || |||||||| |||||||| Sbjct: 12942921 cttgagcgcgtcggggatgaccatgcgcttggtcctgtcgtacggcggcggcacgccctc 12942862 Query: 411 gaacgccttcagcctggcgagcgcagcctc 440 | ||||||||||||| || ||||| ||||| Sbjct: 12942861 gtacgccttcagccttgccagcgccgcctc 12942832 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 279 gtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgacccggctg 338 ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || ||||| Sbjct: 12943094 gtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgcccaggctg 12943035 Query: 339 cagcctcagaacc 351 ||||||||||||| Sbjct: 12943034 cagcctcagaacc 12943022
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Minus Query: 351 cttgagcgcgtcggggatgaccatacgcttggtgcgatcataaggcggcgggacgccctc 410 |||||||||||||||||||||||| |||||||| | || || |||||||| |||||||| Sbjct: 13023128 cttgagcgcgtcggggatgaccatgcgcttggtcctgtcgtacggcggcggcacgccctc 13023069 Query: 411 gaacgccttcagcctggcgagcgcagcctc 440 | ||||||||||||| || ||||| ||||| Sbjct: 13023068 gtacgccttcagccttgccagcgccgcctc 13023039 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 279 gtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgacccggctg 338 ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || ||||| Sbjct: 13023301 gtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgcccaggctg 13023242 Query: 339 cagcctcagaacc 351 ||||||||||||| Sbjct: 13023241 cagcctcagaacc 13023229
>gb|AF521144.1| Kandelia candel 60S ribosomal protein mRNA, partial cds Length = 236 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 496 gagggggcgcggaagtggatgggaccgtgcgacggcttggtgttcatccgcttgcggagg 555 ||||| |||||||| |||||||| ||||| || |||||||||||||| || ||||| ||| Sbjct: 224 gagggagcgcggaaatggatgggtccgtgagaaggcttggtgttcatgcgtttgcgaagg 165 Query: 556 aagcggaggtacttcatcttctg 578 || | ||||||||||||||||| Sbjct: 164 aacctcaggtacttcatcttctg 142
>ref|NM_111591.2| Arabidopsis thaliana structural constituent of ribosome AT3G07110 transcript variant AT3G07110.1 mRNA, complete cds Length = 881 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Minus Query: 451 gtcttgtgcgggatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaag 510 |||||||| || ||||| ||||| ||||| |||||||| || || ||||| || |||||| Sbjct: 354 gtcttgtgtggaatcataccgcgaacggtacgccagaagatcttggagggagcacggaag 295 Query: 511 tggatgggaccgtgcgacggcttggtgttcatccgcttgcggaggaagcggaggtacttc 570 || || || ||||| || || || |||||||| ||||| ||||| || | | ||||||| Sbjct: 294 tgaataggtccgtgagaaggtttagtgttcatacgcttacggagaaacctcatgtacttc 235 Query: 571 atcttctgacg 581 ||||||||||| Sbjct: 234 atcttctgacg 224
>ref|NM_001035577.1| Arabidopsis thaliana structural constituent of ribosome AT3G07110 transcript variant AT3G07110.2 mRNA, complete cds Length = 893 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Minus Query: 451 gtcttgtgcgggatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaag 510 |||||||| || ||||| ||||| ||||| |||||||| || || ||||| || |||||| Sbjct: 363 gtcttgtgtggaatcataccgcgaacggtacgccagaagatcttggagggagcacggaag 304 Query: 511 tggatgggaccgtgcgacggcttggtgttcatccgcttgcggaggaagcggaggtacttc 570 || || || ||||| || || || |||||||| ||||| ||||| || | | ||||||| Sbjct: 303 tgaataggtccgtgagaaggtttagtgttcatacgcttacggagaaacctcatgtacttc 244 Query: 571 atcttctgacg 581 ||||||||||| Sbjct: 243 atcttctgacg 233
>gb|DQ099054.1| Arachis stenosperma clone AS1RN3B12 microsatellite sequence Length = 758 Score = 69.9 bits (35), Expect = 9e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 451 gtcttgtgcgggatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaag 510 |||||||| || ||||| || || |||||||||||||| || || || || || ||||| Sbjct: 385 gtcttgtgtggtatcatacctcgaacggtgcgccagaagatcttagaaggagcacggaaa 444 Query: 511 tggatgggaccgtgcgacggcttggtgttcatccgcttgcggaggaa 557 ||||||||||| || || ||||| |||||||||| ||| |||||||| Sbjct: 445 tggatgggaccatgagagggcttagtgttcatcctcttacggaggaa 491 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 154 gaacccagcttctcctctgcagccttctcagc 185 ||||| ||||||||||| ||| |||||||||| Sbjct: 88 gaaccaagcttctcctcagcaaccttctcagc 119
>gb|AY114589.1| Arabidopsis thaliana putative 60S ribosomal protein L13A (At3g07110) mRNA, complete cds Length = 667 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Minus Query: 451 gtcttgtgcgggatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaag 510 |||||||| || ||||| ||||| ||||| |||||||| || || ||||| || |||||| Sbjct: 290 gtcttgtgtggaatcataccgcgaacggtacgccagaagatcttggagggagcacggaag 231 Query: 511 tggatgggaccgtgcgacggcttggtgttcatccgcttgcggaggaagcggaggtacttc 570 || || || ||||| || || || |||||||| ||||| ||||| || | | ||||||| Sbjct: 230 tgaataggtccgtgagaaggtttagtgttcatacgcttacggagaaacctcatgtacttc 171 Query: 571 atcttctgacg 581 ||||||||||| Sbjct: 170 atcttctgacg 160
>gb|AY062793.1| Arabidopsis thaliana putative 60S ribosomal protein L13A (At3g07110; T1B9.24) mRNA, complete cds Length = 811 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Minus Query: 451 gtcttgtgcgggatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaag 510 |||||||| || ||||| ||||| ||||| |||||||| || || ||||| || |||||| Sbjct: 353 gtcttgtgtggaatcataccgcgaacggtacgccagaagatcttggagggagcacggaag 294 Query: 511 tggatgggaccgtgcgacggcttggtgttcatccgcttgcggaggaagcggaggtacttc 570 || || || ||||| || || || |||||||| ||||| ||||| || | | ||||||| Sbjct: 293 tgaataggtccgtgagaaggtttagtgttcatacgcttacggagaaacctcatgtacttc 234 Query: 571 atcttctgacg 581 ||||||||||| Sbjct: 233 atcttctgacg 223
>gb|AY057551.1| Arabidopsis thaliana AT3g07110/T1B9_24 mRNA, complete cds Length = 831 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Minus Query: 451 gtcttgtgcgggatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaag 510 |||||||| || ||||| ||||| ||||| |||||||| || || ||||| || |||||| Sbjct: 353 gtcttgtgtggaatcataccgcgaacggtacgccagaagatcttggagggagcacggaag 294 Query: 511 tggatgggaccgtgcgacggcttggtgttcatccgcttgcggaggaagcggaggtacttc 570 || || || ||||| || || || |||||||| ||||| ||||| || | | ||||||| Sbjct: 293 tgaataggtccgtgagaaggtttagtgttcatacgcttacggagaaacctcatgtacttc 234 Query: 571 atcttctgacg 581 ||||||||||| Sbjct: 233 atcttctgacg 223
>gb|AF325041.2|AF325041 Arabidopsis thaliana AT3g07110 (AT3g07110/T1B9_24) mRNA, complete cds Length = 829 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Minus Query: 451 gtcttgtgcgggatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaag 510 |||||||| || ||||| ||||| ||||| |||||||| || || ||||| || |||||| Sbjct: 353 gtcttgtgtggaatcataccgcgaacggtacgccagaagatcttggagggagcacggaag 294 Query: 511 tggatgggaccgtgcgacggcttggtgttcatccgcttgcggaggaagcggaggtacttc 570 || || || ||||| || || || |||||||| ||||| ||||| || | | ||||||| Sbjct: 293 tgaataggtccgtgagaaggtttagtgttcatacgcttacggagaaacctcatgtacttc 234 Query: 571 atcttctgacg 581 ||||||||||| Sbjct: 233 atcttctgacg 223
>emb|BX822336.1|CNS0A5ZO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZC08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 788 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Minus Query: 451 gtcttgtgcgggatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaag 510 |||||||| || ||||| ||||| ||||| |||||||| || || ||||| || |||||| Sbjct: 337 gtcttgtgtggaatcataccgcgaacggtacgccagaagatcttggagggagcacggaag 278 Query: 511 tggatgggaccgtgcgacggcttggtgttcatccgcttgcggaggaagcggaggtacttc 570 || || || ||||| || || || |||||||| ||||| ||||| || | | ||||||| Sbjct: 277 tgaataggtccgtgagaaggtttagtgttcatacgcttacggagaaacctcatgtacttc 218 Query: 571 atcttctgacg 581 ||||||||||| Sbjct: 217 atcttctgacg 207
>emb|BX824368.1|CNS0A5OL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH43ZE05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 800 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Minus Query: 451 gtcttgtgcgggatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaag 510 |||||||| || ||||| ||||| ||||| |||||||| || || ||||| || |||||| Sbjct: 331 gtcttgtgtggaatcataccgcgaacggtacgccagaagatcttggagggagcacggaag 272 Query: 511 tggatgggaccgtgcgacggcttggtgttcatccgcttgcggaggaagcggaggtacttc 570 || || || ||||| || || || |||||||| ||||| ||||| || | | ||||||| Sbjct: 271 tgaataggtccgtgagaaggtttagtgttcatacgcttacggagaaacctcatgtacttc 212 Query: 571 atcttctgacg 581 ||||||||||| Sbjct: 211 atcttctgacg 201
>emb|BX822519.1|CNS0A5UA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB45ZA10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 781 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Minus Query: 451 gtcttgtgcgggatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaag 510 |||||||| || ||||| ||||| ||||| |||||||| || || ||||| || |||||| Sbjct: 315 gtcttgtgtggaatcataccgcgaacggtacgccagaagatcttggagggagcacggaag 256 Query: 511 tggatgggaccgtgcgacggcttggtgttcatccgcttgcggaggaagcggaggtacttc 570 || || || ||||| || || || |||||||| ||||| ||||| || | | ||||||| Sbjct: 255 tgaataggtccgtgagaaggtttagtgttcatacgcttacggagaaacctcatgtacttc 196 Query: 571 atcttctgacg 581 ||||||||||| Sbjct: 195 atcttctgacg 185
>emb|BX822098.1|CNS0A5TD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB12ZA04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 660 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Minus Query: 451 gtcttgtgcgggatcatgccgcgcacggtgcgccagaaaattttcgagggggcgcggaag 510 |||||||| || ||||| ||||| ||||| |||||||| || || ||||| || |||||| Sbjct: 205 gtcttgtgtggaatcataccgcgaacggtacgccagaagatcttggagggagcacggaag 146 Query: 511 tggatgggaccgtgcgacggcttggtgttcatccgcttgcggaggaagcggaggtacttc 570 || || || ||||| || || || |||||||| ||||| ||||| || | | ||||||| Sbjct: 145 tgaataggtccgtgagaaggtttagtgttcatacgcttacggagaaacctcatgtacttc 86 Query: 571 atcttctgacg 581 ||||||||||| Sbjct: 85 atcttctgacg 75
>gb|AY498745.1| Capsicum annuum 60S ribosomal protein L13a (RpL13a) mRNA, complete cds Length = 797 Score = 67.9 bits (34), Expect = 4e-08 Identities = 101/122 (82%), Gaps = 1/122 (0%) Strand = Plus / Minus Query: 151 tgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggccagttgc 210 |||| ||| ||||||||||| |||||||| |||||||| || | || |||||||| ||| Sbjct: 655 tgaggaccgagcttctcctcggcagcctt-tcagccttaaccctgagtttggccagctgc 597 Query: 211 ttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttccttgata 270 || ||||| || |||| ||||| ||| ||||||| ||||| ||||| || ||||||||| Sbjct: 596 tttctcctctcataagtgacctgggctctctcctttctcttgtcctcgagctccttgata 537 Query: 271 gt 272 || Sbjct: 536 gt 535
>ref|XM_509965.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC452925), mRNA Length = 581 Score = 60.0 bits (30), Expect = 9e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||||||||||||||||||||||||||| Sbjct: 416 cttggccttctccttcctcttctcctccag 387 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 ||||||||||||||||||| |||||| Sbjct: 194 ttggtgttcatccgcttgcagaggaa 169
>ref|XM_526928.1| PREDICTED: Pan troglodytes integrin alpha 2 (LOC471550), mRNA Length = 3000 Score = 60.0 bits (30), Expect = 9e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||||||||||||||||||||||||||| Sbjct: 2883 cttggccttctccttcctcttctcctccag 2854
>ref|XM_514152.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC457684), mRNA Length = 663 Score = 60.0 bits (30), Expect = 9e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||||||||||||||||||||||||||| Sbjct: 495 cttggccttctccttcctcttctcctccag 466
>gb|AC125807.9| Homo sapiens 12 BAC RP11-253E3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 131995 Score = 60.0 bits (30), Expect = 9e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||||||||||||||||||||||||||| Sbjct: 81648 cttggccttctccttcctcttctcctccag 81677
>gb|AC020750.4| Homo sapiens chromosome 3 clone RP11-105H19 map 3p, complete sequence Length = 156933 Score = 60.0 bits (30), Expect = 9e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||||||||||||||||||||||||||| Sbjct: 95042 cttggccttctccttcctcttctcctccag 95013
>gb|AC083855.3| Homo sapiens chromosome 3 clone RP11-622I12 map 3p, complete sequence Length = 190861 Score = 60.0 bits (30), Expect = 9e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||||||||||||||||||||||||||| Sbjct: 188727 cttggccttctccttcctcttctcctccag 188756
>gb|AC003072.1|AC003072 Human BAC clone CTA-963H5 from 22q12.1-qter, complete sequence Length = 39401 Score = 60.0 bits (30), Expect = 9e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||||||||||||||||||||||||||| Sbjct: 2080 cttggccttctccttcctcttctcctccag 2109
>gb|AC012395.5|ATAC012395 Arabidopsis thaliana chromosome III BAC T1B9 genomic sequence, complete sequence Length = 99128 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 469 ccgcgcacggtgcgccagaaaattttcgagggggcgcggaagtggatgggaccgtgcgac 528 ||||| ||||| |||||||| || || ||||| || |||||||| || || ||||| || Sbjct: 82420 ccgcgaacggtacgccagaagatcttggagggagcacggaagtgaataggtccgtgagaa 82479 Query: 529 ggcttggtgttcatccgcttgcggaggaagcggaggtacttcatcttctgacg 581 || || |||||||| ||||| ||||| || | | |||||||||||||||||| Sbjct: 82480 ggtttagtgttcatacgcttacggagaaacctcatgtacttcatcttctgacg 82532
>gb|U18488.1|STU18488 Salmo trutta transplantation antigen mRNA, partial cds Length = 621 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctcca 259 ||||||||||||||||||||||||||||| Sbjct: 455 cttggccttctccttcctcttctcctcca 427
>gb|AC024940.39| Homo sapiens 12 BAC RP11-627K11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 205952 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaagcggaggtacttca 571 |||||||||||||||||||||||||| ||||||||||| Sbjct: 94939 ttggtgttcatccgcttgcggaggaaagcgaggtacttca 94900 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 95240 cttggctttctctttcctcttctcctccag 95211
>ref|XM_944672.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC648462), mRNA Length = 1590 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaagcggaggtacttca 571 |||||||||||||||||||||||||| ||||||||||| Sbjct: 1154 ttggtgttcatccgcttgcggaggaaagcgaggtacttca 1115 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 1455 cttggctttctctttcctcttctcctccag 1426
>ref|XM_944670.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC648462), mRNA Length = 1547 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaagcggaggtacttca 571 |||||||||||||||||||||||||| ||||||||||| Sbjct: 1079 ttggtgttcatccgcttgcggaggaaagcgaggtacttca 1040 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 1380 cttggctttctctttcctcttctcctccag 1351
>ref|XM_940589.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC648462), mRNA Length = 1642 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaagcggaggtacttca 571 |||||||||||||||||||||||||| ||||||||||| Sbjct: 1154 ttggtgttcatccgcttgcggaggaaagcgaggtacttca 1115 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 1455 cttggctttctctttcctcttctcctccag 1426
>ref|XM_944666.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC648462), mRNA Length = 1542 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaagcggaggtacttca 571 |||||||||||||||||||||||||| ||||||||||| Sbjct: 1154 ttggtgttcatccgcttgcggaggaaagcgaggtacttca 1115 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 1389 cttggctttctctttcctcttctcctccag 1360
>ref|XM_933780.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC441632), mRNA Length = 1589 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaagcggaggtacttca 571 |||||||||||||||||||||||||| ||||||||||| Sbjct: 1153 ttggtgttcatccgcttgcggaggaaagcgaggtacttca 1114 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 1454 cttggctttctctttcctcttctcctccag 1425
>ref|XM_497335.2| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC441632), mRNA Length = 1546 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaagcggaggtacttca 571 |||||||||||||||||||||||||| ||||||||||| Sbjct: 1078 ttggtgttcatccgcttgcggaggaaagcgaggtacttca 1039 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 1379 cttggctttctctttcctcttctcctccag 1350
>ref|XM_929566.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC441632), mRNA Length = 1641 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaagcggaggtacttca 571 |||||||||||||||||||||||||| ||||||||||| Sbjct: 1153 ttggtgttcatccgcttgcggaggaaagcgaggtacttca 1114 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 1454 cttggctttctctttcctcttctcctccag 1425
>ref|XM_933775.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC441632), mRNA Length = 1541 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaagcggaggtacttca 571 |||||||||||||||||||||||||| ||||||||||| Sbjct: 1153 ttggtgttcatccgcttgcggaggaaagcgaggtacttca 1114 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 1388 cttggctttctctttcctcttctcctccag 1359
>gb|AC012156.14|AC012156 Homo sapiens 12p11-37.2-54.4 BAC RP11-433D24 (Rosewell Park Cancer Institute Human Bac Library) complete sequence Length = 162200 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 532 ttggtgttcatccgcttgcggaggaagcggaggtacttca 571 |||||||||||||||||||||||||| ||||||||||| Sbjct: 94399 ttggtgttcatccgcttgcggaggaaagcgaggtacttca 94438 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 94098 cttggctttctctttcctcttctcctccag 94127
>gb|DQ200397.1| Solanum tuberosum clone 070F10 60S ribosomal protein L13a-like protein mRNA, complete cds Length = 848 Score = 54.0 bits (27), Expect = 5e-04 Identities = 102/127 (80%) Strand = Plus / Minus Query: 151 tgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggccagttgc 210 |||| ||| ||||||||||| ||||||||||| ||||| || | || ||||||| ||| Sbjct: 629 tgaggaccgagcttctcctcagcagccttctcggccttaaccctgagtttggccaactgc 570 Query: 211 ttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttccttgata 270 || ||||| ||||| | |||| ||| ||||||| ||||| | ||| || ||||||||| Sbjct: 569 tttctcctctcgtatgctacctgggctctctcctttctcttgttctcaagctccttgata 510 Query: 271 gtttcat 277 || |||| Sbjct: 509 gtgtcat 503
>emb|AJ388525.1|CFA388525 Canis familiaris mRNA for partial Ribosomal protein L13A (rpL13 gene) Length = 427 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaag 558 ||||||||||||||||||||||||||| Sbjct: 192 ttggtgttcatccgcttgcggaggaag 166
>gb|AC068898.8| Homo sapiens chromosome 10 clone RP11-534L6, complete sequence Length = 176188 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 234 ggccttctccttcctcttctcctccag 260 ||||||||||||||||||||||||||| Sbjct: 137634 ggccttctccttcctcttctcctccag 137660
>gb|AC035139.11| Homo sapiens chromosome 10 clone RP11-563N6, complete sequence Length = 210472 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 234 ggccttctccttcctcttctcctccag 260 ||||||||||||||||||||||||||| Sbjct: 1517 ggccttctccttcctcttctcctccag 1543
>gb|AC022533.10| Homo sapiens chromosome 10 clone RP11-230D19, complete sequence Length = 174569 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 234 ggccttctccttcctcttctcctccag 260 ||||||||||||||||||||||||||| Sbjct: 136041 ggccttctccttcctcttctcctccag 136015
>gb|AY650304.1| Macaca fascicularis ribosomal protein L13A mRNA, partial cds Length = 462 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 65 ttggtgttcatccgcttgcggaggaa 40 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctcca 259 |||||| |||||||||||||||||||||| Sbjct: 366 cttggctttctccttcctcttctcctcca 338
>gb|AF109186.1| Homo sapiens FWP004 mRNA, complete cds Length = 1247 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 782 ttggtgttcatccgcttgcggaggaa 757 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 1083 cttggctttctctttcctcttctcctccag 1054
>ref|XM_520729.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC465277), mRNA Length = 662 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||||||||||||||||||||| Sbjct: 514 cttggctttctccttcctcttctcctccag 485
>ref|XM_512821.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC456207), mRNA Length = 865 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 341 ttggtgttcatccgcttgcggaggaa 316 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 642 cttggctttctctttcctcttctcctccag 613
>ref|XM_512656.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC456029), mRNA Length = 570 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 115 ttggtgttcatccgcttgcggaggaa 90 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 415 cttggctttctctttcctcttctcctccag 386
>ref|XM_511050.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC454185), mRNA Length = 689 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 217 ttggtgttcatccgcttgcggaggaa 192 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 518 cttggctttctctttcctcttctcctccag 489
>ref|XM_509803.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC452746), mRNA Length = 713 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 222 ttggtgttcatccgcttgcggaggaa 197 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 523 cttggctttctctttcctcttctcctccag 494
>ref|XM_508935.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC451757), mRNA Length = 690 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 ||||||||||||||| |||||||||||||| Sbjct: 423 cttggccttctcctttctcttctcctccag 394
>ref|XM_508036.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC450737), mRNA Length = 660 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 221 ttggtgttcatccgcttgcggaggaa 196 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 232 ttggccttctccttcctcttctcctccag 260 ||||| ||||| ||||||||||||||||| Sbjct: 521 ttggctttctctttcctcttctcctccag 493
>gb|DQ216006.1| Taeniopygia guttata clone 0061P0024G09 ribosomal protein L13A-like mRNA, complete sequence Length = 786 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 ||||||||||||||||| |||||||||||| Sbjct: 499 cttggccttctccttccgcttctcctccag 470 Score = 40.1 bits (20), Expect = 8.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 505 cggaagtggatgggaccgtgcgacggcttggtgttcatcc 544 |||||||||| |||||| |||| || ||||||||||||| Sbjct: 225 cggaagtggaagggaccccgcgaggggttggtgttcatcc 186
>gb|DQ216003.1| Taeniopygia guttata clone 0058P0045E08 ribosomal protein L13A-like mRNA, complete sequence Length = 801 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 ||||||||||||||||| |||||||||||| Sbjct: 528 cttggccttctccttccgcttctcctccag 499
>gb|DQ216001.1| Taeniopygia guttata clone 0058P0049C02 ribosomal protein L13A-like mRNA, complete sequence Length = 801 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 ||||||||||||||||| |||||||||||| Sbjct: 528 cttggccttctccttccgcttctcctccag 499
>ref|XM_527683.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC472308), mRNA Length = 612 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 194 ttggtgttcatccgcttgcggaggaa 169 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 495 cttggctttctctttcctcttctcctccag 466
>ref|NM_012423.2| Homo sapiens ribosomal protein L13a (RPL13A), mRNA Length = 1142 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 216 ttggtgttcatccgcttgcggaggaa 191 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 517 cttggctttctctttcctcttctcctccag 488
>ref|XM_526130.1| PREDICTED: Pan troglodytes similar to APG7 autophagy 7-like; ubiquitin activating enzyme E1-like protein (LOC470747), mRNA Length = 2091 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||||||||| ||||||||||||||||| Sbjct: 169 cttggccttctcattcctcttctcctccag 198
>gb|BC070223.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:88204 IMAGE:6736442), complete cds Length = 1153 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 216 ttggtgttcatccgcttgcggaggaa 191 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 517 cttggctttctctttcctcttctcctccag 488
>gb|BC065236.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:70840 IMAGE:6161599), complete cds Length = 663 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 204 ttggtgttcatccgcttgcggaggaa 179 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 505 cttggctttctctttcctcttctcctccag 476
>gb|BC000514.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:8547 IMAGE:2822802), complete cds Length = 1125 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 199 ttggtgttcatccgcttgcggaggaa 174 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 500 cttggctttctctttcctcttctcctccag 471
>ref|XM_533620.2| PREDICTED: Canis familiaris Ribosomal protein L13a (RPL13A), mRNA Length = 525 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 ||||||||||| |||||||||||||||||| Sbjct: 372 cttggccttcttcttcctcttctcctccag 343
>gb|AC146032.2| Pan troglodytes BAC clone RP43-14B10 from 7, complete sequence Length = 181694 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 30164 ttggtgttcatccgcttgcggaggaa 30189 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 29863 cttggctttctctttcctcttctcctccag 29892
>gb|BC013230.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone IMAGE:3462928) Length = 658 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 192 ttggtgttcatccgcttgcggaggaa 167 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 493 cttggctttctctttcctcttctcctccag 464
>gb|BC043976.1| Xenopus laevis ribosomal protein L13a, mRNA (cDNA clone MGC:54018 IMAGE:5571546), complete cds Length = 819 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 ||||||||||||||| |||||||||||||| Sbjct: 584 cttggccttctcctttctcttctcctccag 555
>gb|BC004900.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone IMAGE:3545758), partial cds Length = 1119 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 190 ttggtgttcatccgcttgcggaggaa 165 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 491 cttggctttctctttcctcttctcctccag 462
>gb|BC071921.1| Homo sapiens cDNA clone IMAGE:6423605, **** WARNING: chimeric clone **** Length = 1357 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 865 ttggtgttcatccgcttgcggaggaa 840 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 1166 cttggctttctctttcctcttctcctccag 1137
>gb|BC021568.1| Homo sapiens cDNA clone IMAGE:3343061, **** WARNING: chimeric clone **** Length = 2530 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 2070 ttggtgttcatccgcttgcggaggaa 2045 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 2370 cttggctttctctttcctcttctcctccag 2341
>emb|BX000688.11| Human DNA sequence from clone DAQB-36F16 on chromosome 6 Contains the GPR53P pseudogene for G protein-coupled receptor 53, the OR2I1P pseudogene for olfactory receptor, family 2, subfamily I, member 1, the UBD gene for ubiquitin D, the OR2H5P pseudogene for olfactory receptor, family 2, subfamily H, member 5, the RPL13AP pseudogene for ribosomal protein L13a, the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2, the GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor, 1, and 3 CpG islands, complete sequence Length = 102684 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 534 ggtgttcatccgcttgcggaggaagcggaggtacttca 571 ||||||||||||||||||||| |||| |||||||||| Sbjct: 50308 ggtgttcatccgcttgcggagaaagcccaggtacttca 50271 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttct 253 ||||||||||||||||||||||| Sbjct: 50599 cttggccttctccttcctcttct 50577 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcc 255 ||||| ||||||||||||||||||| Sbjct: 49210 cttggtcttctccttcctcttctcc 49186
>emb|AL662826.11| Human DNA sequence from clone XXbac-101I20 on chromosome 6 contains a MAS1 oncogene pseudogene, a olfactory receptor, family 2, subfamily I, member 1 pseudogene (OR2I1P, HS6M1-14P), the UBD gene for ubiquitin D (FAT10), a olfactory receptor, family 2, subfamily H, member 5 pseudogene (OR2H5P, HS6M1-13P), a 60S ribosomal protein L13A (RPL13A) pseudogene, the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2 (HS6M1-12), the GABBR1 gene for gamma-aminobutryic acid (GABA) B receptor, 1 (GPRC3A, GABABR1), the 5' end of the MOG gene for myelin oligodendrocyte protein and three CpG islands, complete sequence Length = 145431 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 534 ggtgttcatccgcttgcggaggaagcggaggtacttca 571 ||||||||||||||||||||| |||| |||||||||| Sbjct: 56729 ggtgttcatccgcttgcggagaaagcccaggtacttca 56692 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttct 253 ||||||||||||||||||||||| Sbjct: 57020 cttggccttctccttcctcttct 56998 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcc 255 ||||| ||||||||||||||||||| Sbjct: 55631 cttggtcttctccttcctcttctcc 55607
>emb|AL645936.5| Human DNA sequence from clone XXbac-126D10 on chromosome 6 contains the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2, the OR2I1P and OR2H5P pseudogenes for olfactory receptor, family 2, subfamily I, member 1 and subfamily H, member 5, the UBD gene for ubiquitin D, a 60S ribosomal protein L13A (RPL13A) pseudogene, the GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor, 1, a SMT3 suppressor of mif two 3 homolog 1 (SMT3H1) pseudogene, the MOG gene for myelin oligodendrocyte glycoprotein, the gene for a novel KRAB box-containing C2H2 type zinc finger protein and four CpG islands, complete sequence Length = 155874 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 534 ggtgttcatccgcttgcggaggaagcggaggtacttca 571 ||||||||||||||||||||| |||| |||||||||| Sbjct: 33601 ggtgttcatccgcttgcggagaaagcccaggtacttca 33564 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttct 253 ||||||||||||||||||||||| Sbjct: 33892 cttggccttctccttcctcttct 33870 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcc 255 ||||| ||||||||||||||||||| Sbjct: 32503 cttggtcttctccttcctcttctcc 32479
>emb|AL358235.16| Human DNA sequence from clone RP11-196N24 on chromosome 10 Contains the 5' end of the gene for a novel protein (possible ortholog of mouse phosphoinositide-3-kinase adaptor protein 1 (Pik3ap1)), the ribosomal protein L13a pseudogene 5 (RPL13AP5) and a CpG island, complete sequence Length = 106506 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 81061 ttggtgttcatccgcttgcggaggaa 81036 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 81362 cttggctttctctttcctcttctcctccag 81333
>emb|AL158163.11| Human DNA sequence from clone RP11-348N5 on chromosome 10 Contains the 3' end of the PDCD4 gene for programmed cell death 4 (neoplastic transformation inhibitor)(H731, MGC33046, MGC33047), a novel gene (LOC92482), the SHOC2 gene for soc-2 suppressor of clear homolog (C. elegans)(SOC2, SUR8, SOC-2, SUR-8, KIAA0862, SIAA0862), ribosomal protein L13a pseudogene 6 (RPL13AP6), the ADRA2A gene for adrenergic, alpha-2A-, receptor (alpha-2AAR subtype C10)(ADRA2, ADRAR, ZNF32, ADRA2R) and two CpG islands, complete sequence Length = 204908 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 54568 ttggtgttcatccgcttgcggaggaa 54593 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 232 ttggccttctccttcctcttctcctccag 260 ||||| ||||| ||||||||||||||||| Sbjct: 54268 ttggctttctctttcctcttctcctccag 54296
>emb|Y09971.1|CPRPL13A C.paradoxa mRNA for ribosomal protein L13a Length = 710 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 397 ggcgggacgccctcgaacgccttcagcctggcgagcgcagcctcgccgcggggcgtcttg 456 ||||| ||||||||||| |||||||||| | || || || |||||||||| |||||| Sbjct: 342 ggcggcacgccctcgaaggccttcagccgctccagggccgcagcgccgcggggggtcttg 283 Query: 457 tgcgggatcatgcc 470 || ||||||||||| Sbjct: 282 tgggggatcatgcc 269
>emb|X56932.1|HS23KDHBP H.sapiens mRNA for 23 kD highly basic protein Length = 672 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 211 ttggtgttcatccgcttgcggaggaa 186 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 512 cttggctttctctttcctcttctcctccag 483
>emb|AJ843089.1| Platichthys flesus mRNA for 60S ribosomal protein L13A (rpl13A gene) Length = 686 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 ||||||||||||||| |||||||||||||| Sbjct: 522 cttggccttctcctttctcttctcctccag 493
>emb|CR759766.5| Human DNA sequence from clone DAMA-BMC177C8 on chromosome 6, complete sequence Length = 127280 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 534 ggtgttcatccgcttgcggaggaagcggaggtacttca 571 ||||||||||||||||||||| |||| |||||||||| Sbjct: 28627 ggtgttcatccgcttgcggagaaagcccaggtacttca 28590 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttct 253 ||||||||||||||||||||||| Sbjct: 28918 cttggccttctccttcctcttct 28896 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcc 255 ||||| ||||||||||||||||||| Sbjct: 27529 cttggtcttctccttcctcttctcc 27505
>gb|BC067891.1| Homo sapiens cDNA clone MGC:87657 IMAGE:5271409, complete cds Length = 1488 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||||||||||||||||||||| Sbjct: 431 cttggctttctccttcctcttctcctccag 402 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 ||||||||||||||||||| |||||| Sbjct: 126 ttggtgttcatccgcttgccgaggaa 101
>emb|CR759870.6| Human DNA sequence from clone DADB-225M10 on chromosome 6, complete sequence Length = 57743 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 534 ggtgttcatccgcttgcggaggaagcggaggtacttca 571 ||||||||||||||||||||| |||| |||||||||| Sbjct: 5453 ggtgttcatccgcttgcggagaaagcccaggtacttca 5416 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttct 253 ||||||||||||||||||||||| Sbjct: 5744 cttggccttctccttcctcttct 5722 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcc 255 ||||| ||||||||||||||||||| Sbjct: 4355 cttggtcttctccttcctcttctcc 4331
>emb|CR788300.6| Human DNA sequence from clone DAAP-188P13 on chromosome 6, complete sequence Length = 78908 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 534 ggtgttcatccgcttgcggaggaagcggaggtacttca 571 ||||||||||||||||||||| |||| |||||||||| Sbjct: 54012 ggtgttcatccgcttgcggagaaagcccaggtacttca 53975 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttct 253 ||||||||||||||||||||||| Sbjct: 54303 cttggccttctccttcctcttct 54281 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcc 255 ||||| ||||||||||||||||||| Sbjct: 52914 cttggtcttctccttcctcttctcc 52890
>gb|AC092768.6| Homo sapiens chromosome 11, clone RP11-1149L18, complete sequence Length = 146364 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||||||||||||||||||||| Sbjct: 2917 cttggctttctccttcctcttctcctccag 2946
>gb|BC103039.1| Bos taurus cDNA clone MGC:128198 IMAGE:7984430, complete cds Length = 679 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 ||||||||||||||| |||||||||||||| Sbjct: 518 cttggccttctcctttctcttctcctccag 489 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggag 554 ||||||||||||||||||||||| Sbjct: 217 ttggtgttcatccgcttgcggag 195
>emb|CR624659.1| full-length cDNA clone CS0DI065YH07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1626 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 668 ttggtgttcatccgcttgcggaggaa 643 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 1513 cttggctttctctttcctcttctcctccag 1484
>emb|CR625138.1| full-length cDNA clone CS0DI071YK05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1078 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR623949.1| full-length cDNA clone CS0DE014YH06 of Placenta of Homo sapiens (human) Length = 1036 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR622930.1| full-length cDNA clone CS0DE004YD03 of Placenta of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR622697.1| full-length cDNA clone CS0DL002YH12 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 649 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 205 ttggtgttcatccgcttgcggaggaa 180 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 506 cttggctttctctttcctcttctcctccag 477
>emb|CR622347.1| full-length cDNA clone CS0DI069YJ19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1084 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR622131.1| full-length cDNA clone CS0DI075YJ21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1116 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 205 ttggtgttcatccgcttgcggaggaa 180 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 506 cttggctttctctttcctcttctcctccag 477
>emb|CR619845.1| full-length cDNA clone CS0DI058YC16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1049 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR620187.1| full-length cDNA clone CS0DE001YC16 of Placenta of Homo sapiens (human) Length = 626 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR618372.1| full-length cDNA clone CS0DD008YF03 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR618336.1| full-length cDNA clone CS0DC008YA18 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1084 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR618182.1| full-length cDNA clone CS0DG002YE04 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR616905.1| full-length cDNA clone CS0DI065YB06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR615101.1| full-length cDNA clone CS0DI074YD18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1099 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR613935.1| full-length cDNA clone CS0DJ010YF15 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR612270.1| full-length cDNA clone CS0DI068YN06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1048 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR613016.1| full-length cDNA clone CS0DI065YK06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 626 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR607854.1| full-length cDNA clone CS0DI035YD15 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 649 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 205 ttggtgttcatccgcttgcggaggaa 180 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 506 cttggctttctctttcctcttctcctccag 477
>emb|CR607799.1| full-length cDNA clone CS0DI067YC06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR608676.1| full-length cDNA clone CS0CAP006YO09 of Thymus of Homo sapiens (human) Length = 628 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR607407.1| full-length cDNA clone CS0DI008YJ20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1088 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR607352.1| full-length cDNA clone CS0DF034YJ13 of Fetal brain of Homo sapiens (human) Length = 1088 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR606179.1| full-length cDNA clone CS0DM013YA03 of Fetal liver of Homo sapiens (human) Length = 626 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR603453.1| full-length cDNA clone CS0DB008YK16 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1083 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 172 ttggtgttcatccgcttgcggaggaa 147 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 473 cttggctttctctttcctcttctcctccag 444
>emb|CR599383.1| full-length cDNA clone CS0DM006YN06 of Fetal liver of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>dbj|AK056837.1| Homo sapiens cDNA FLJ32275 fis, clone PROST2000053, moderately similar to 60S RIBOSOMAL PROTEIN L13A Length = 2315 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 702 ttggtgttcatccgcttgcggaggaa 677 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 1708 cttggctttctctttcctcttctcctccag 1679
>emb|CR596607.1| full-length cDNA clone CS0DI029YH03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1091 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 180 ttggtgttcatccgcttgcggaggaa 155 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 481 cttggctttctctttcctcttctcctccag 452
>emb|CR595200.1| full-length cDNA clone CS0DI035YJ24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 626 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>gb|AC010619.7| Homo sapiens chromosome 19 clone CTD-3148I10, complete sequence Length = 179394 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 77685 ttggtgttcatccgcttgcggaggaa 77660 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 78688 cttggctttctctttcctcttctcctccag 78659
>emb|CR592554.1| full-length cDNA clone CS0DC029YN07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR591518.1| full-length cDNA clone CS0DB008YJ02 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1069 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR591301.1| full-length cDNA clone CS0DL008YK19 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 182 ttggtgttcatccgcttgcggaggaa 157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>gb|AC084878.12| Homo sapiens 12q BAC RP11-101K23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 135060 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 231 cttggccttctccttcctcttctcctccag 260 |||| ||||||||||||||||||||||||| Sbjct: 77781 cttgaccttctccttcctcttctcctccag 77810
>gb|AC098935.2| Homo sapiens chromosome 1 clone RP11-564A8, complete sequence Length = 192565 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 ||||||||||||||||| |||||||||||| Sbjct: 60141 cttggccttctccttccacttctcctccag 60112 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 ||||||||||||||||||||| |||| Sbjct: 59841 ttggtgttcatccgcttgcgggggaa 59816
>ref|XM_931056.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC284821), mRNA Length = 1132 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 534 ggtgttcatccgcttgcggaggaagcggaggtacttca 571 |||||||||||||||||||||||| | |||||||||| Sbjct: 215 ggtgttcatccgcttgcggaggaaacccaggtacttca 178 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 517 cttggctttctctttcctcttctcctccag 488
>ref|XM_931051.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC284821), mRNA Length = 679 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 534 ggtgttcatccgcttgcggaggaagcggaggtacttca 571 |||||||||||||||||||||||| | |||||||||| Sbjct: 215 ggtgttcatccgcttgcggaggaaacccaggtacttca 178 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 517 cttggctttctctttcctcttctcctccag 488
>ref|XM_931046.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC284821), mRNA Length = 1050 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 534 ggtgttcatccgcttgcggaggaagcggaggtacttca 571 |||||||||||||||||||||||| | |||||||||| Sbjct: 133 ggtgttcatccgcttgcggaggaaacccaggtacttca 96 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 435 cttggctttctctttcctcttctcctccag 406
>ref|XM_931040.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC284821), mRNA Length = 1067 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 534 ggtgttcatccgcttgcggaggaagcggaggtacttca 571 |||||||||||||||||||||||| | |||||||||| Sbjct: 214 ggtgttcatccgcttgcggaggaaacccaggtacttca 177 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 452 cttggctttctctttcctcttctcctccag 423
>ref|XM_926157.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC284821), mRNA Length = 666 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 534 ggtgttcatccgcttgcggaggaagcggaggtacttca 571 |||||||||||||||||||||||| | |||||||||| Sbjct: 214 ggtgttcatccgcttgcggaggaaacccaggtacttca 177 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 516 cttggctttctctttcctcttctcctccag 487
>ref|XM_936627.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a (LOC647572), mRNA Length = 1466 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||||||||||||||||||||| Sbjct: 430 cttggctttctccttcctcttctcctccag 401 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 ||||||||||||||||||| |||||| Sbjct: 125 ttggtgttcatccgcttgccgaggaa 100
>ref|XM_928691.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a (LOC645683), mRNA Length = 1466 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||||||||||||||||||||| Sbjct: 430 cttggctttctccttcctcttctcctccag 401 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 ||||||||||||||||||| |||||| Sbjct: 125 ttggtgttcatccgcttgccgaggaa 100
>ref|XM_945323.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC649250), mRNA Length = 655 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 215 ttggtgttcatccgcttgcggaggaa 190 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 232 ttggccttctccttcctcttctcctccag 260 ||||| ||||| ||||||||||||||||| Sbjct: 515 ttggctttctctttcctcttctcctccag 487
>ref|XM_941634.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC649250), mRNA Length = 667 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 215 ttggtgttcatccgcttgcggaggaa 190 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 232 ttggccttctccttcctcttctcctccag 260 ||||| ||||| ||||||||||||||||| Sbjct: 515 ttggctttctctttcctcttctcctccag 487
>ref|XM_945318.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC649250), mRNA Length = 575 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 210 ttggtgttcatccgcttgcggaggaa 185 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 232 ttggccttctccttcctcttctcctccag 260 ||||| ||||| ||||||||||||||||| Sbjct: 444 ttggctttctctttcctcttctcctccag 416
>ref|XM_944191.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC648326), mRNA Length = 703 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 218 ttggtgttcatccgcttgcggaggaa 193 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 519 cttggctttctctttcctcttctcctccag 490
>ref|XM_944188.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC648326), mRNA Length = 622 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 137 ttggtgttcatccgcttgcggaggaa 112 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 438 cttggctttctctttcctcttctcctccag 409
>ref|XM_944185.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC648326), mRNA Length = 595 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 110 ttggtgttcatccgcttgcggaggaa 85 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 411 cttggctttctctttcctcttctcctccag 382
>ref|XM_944181.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC648326), mRNA Length = 626 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 212 ttggtgttcatccgcttgcggaggaa 187 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 447 cttggctttctctttcctcttctcctccag 418
>ref|XM_939484.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC648326), mRNA Length = 711 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 226 ttggtgttcatccgcttgcggaggaa 201 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 527 cttggctttctctttcctcttctcctccag 498
>ref|XM_930133.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC644511), mRNA Length = 660 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 215 ttggtgttcatccgcttgcggaggaa 190 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 232 ttggccttctccttcctcttctcctccag 260 ||||| ||||| ||||||||||||||||| Sbjct: 515 ttggctttctctttcctcttctcctccag 487
>ref|XM_934381.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC644511), mRNA Length = 575 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 210 ttggtgttcatccgcttgcggaggaa 185 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 232 ttggccttctccttcctcttctcctccag 260 ||||| ||||| ||||||||||||||||| Sbjct: 444 ttggctttctctttcctcttctcctccag 416
>ref|XM_932924.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC283340), mRNA Length = 700 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 218 ttggtgttcatccgcttgcggaggaa 193 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 519 cttggctttctctttcctcttctcctccag 490
>ref|XM_932919.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC283340), mRNA Length = 590 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 110 ttggtgttcatccgcttgcggaggaa 85 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 411 cttggctttctctttcctcttctcctccag 382
>ref|XM_932916.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC283340), mRNA Length = 610 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 130 ttggtgttcatccgcttgcggaggaa 105 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 431 cttggctttctctttcctcttctcctccag 402
>ref|XM_208072.6| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC283340), mRNA Length = 708 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 226 ttggtgttcatccgcttgcggaggaa 201 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 527 cttggctttctctttcctcttctcctccag 498
>ref|XM_932910.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC283340), mRNA Length = 626 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 212 ttggtgttcatccgcttgcggaggaa 187 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 447 cttggctttctctttcctcttctcctccag 418
>gb|BC105558.1| Bos taurus cDNA clone IMAGE:8120112, with apparent retained intron Length = 2007 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 ||||||||||||||| |||||||||||||| Sbjct: 1303 cttggccttctcctttctcttctcctccag 1274 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggag 554 ||||||||||||||||||||||| Sbjct: 1002 ttggtgttcatccgcttgcggag 980
>gb|AC006137.3|AC006137 Homo sapiens clone SCb-254N2 (UWGC:rg254N02) from 6p21, complete sequence Length = 129806 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 534 ggtgttcatccgcttgcggaggaagcggaggtacttca 571 ||||||||||||||||||||| |||| |||||||||| Sbjct: 74595 ggtgttcatccgcttgcggagaaagcccaggtacttca 74632 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 231 cttggccttctccttcctcttct 253 ||||||||||||||||||||||| Sbjct: 74304 cttggccttctccttcctcttct 74326 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 cttggccttctccttcctcttctcc 255 ||||| ||||||||||||||||||| Sbjct: 75693 cttggtcttctccttcctcttctcc 75717
>emb|BX927223.9| Human DNA sequence from clone DAMA-380P17 on chromosome 6, complete sequence Length = 83649 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 534 ggtgttcatccgcttgcggaggaagcggaggtacttca 571 ||||||||||||||||||||| |||| |||||||||| Sbjct: 76629 ggtgttcatccgcttgcggagaaagcccaggtacttca 76592 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttct 253 ||||||||||||||||||||||| Sbjct: 76920 cttggccttctccttcctcttct 76898 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcc 255 ||||| ||||||||||||||||||| Sbjct: 75531 cttggtcttctccttcctcttctcc 75507
>dbj|AB168305.1| Macaca fascicularis testis cDNA clone: QtsA-11103, similar to human ribosomal protein L13a (RPL13A), mRNA, RefSeq: NM_012423.2 Length = 680 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 216 ttggtgttcatccgcttgcggaggaa 191 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctcca 259 |||||| |||||||||||||||||||||| Sbjct: 517 cttggctttctccttcctcttctcctcca 489
>ref|NG_002538.1| Homo sapiens ribosomal protein L13a pseudogene 2 (RPL13AP2) on chromosome 14 Length = 773 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcct 256 |||||||||||||||||||||||||| Sbjct: 530 cttggccttctccttcctcttctcct 505
>gb|AC018523.9|AC018523 Homo sapiens chromosome , clone RP11-140L24, complete sequence Length = 166507 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||||||||||||||||||||| Sbjct: 162299 cttggctttctccttcctcttctcctccag 162328
>dbj|AK222747.1| Homo sapiens mRNA for ribosomal protein L13a variant, clone: DMC05308 Length = 630 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 196 ttggtgttcatccgcttgcggaggaa 171 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 497 cttggctttctctttcctcttctcctccag 468
>dbj|BS000103.1| Pan troglodytes chromosome 22 clone:PTB-031J04, map 22, complete sequences Length = 164274 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 10886 ttggtgttcatccgcttgcggaggaa 10861 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 11206 cttggctttctctttcctcttctcctccag 11177
>dbj|AK130605.1| Homo sapiens cDNA FLJ27095 fis, clone SPL04438, highly similar to 60S ribosomal protein L13A Length = 1125 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 217 ttggtgttcatccgcttgcggaggaa 192 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 518 cttggctttctctttcctcttctcctccag 489
>gb|BC062537.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:71249 IMAGE:4908022), complete cds Length = 1122 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 196 ttggtgttcatccgcttgcggaggaa 171 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 497 cttggctttctctttcctcttctcctccag 468
>gb|BC071929.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:88614 IMAGE:5808487), complete cds Length = 1126 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 200 ttggtgttcatccgcttgcggaggaa 175 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 501 cttggctttctctttcctcttctcctccag 472
>emb|AL157792.3|CNS01RG7 Human chromosome 14 DNA sequence BAC R-388M7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 194760 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 231 cttggccttctccttcctcttctcct 256 |||||||||||||||||||||||||| Sbjct: 115340 cttggccttctccttcctcttctcct 115365
>emb|AL355773.4|CNS05TCO Human chromosome 14 DNA sequence BAC R-813I20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 216647 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||||||||||||||||||||| Sbjct: 124955 cttggctttctccttcctcttctcctccag 124984 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 532 ttggtgttcatccgcttgcggaggaa 557 ||||||||||||||||||| |||||| Sbjct: 125260 ttggtgttcatccgcttgccgaggaa 125285
>dbj|AP001693.1| Homo sapiens genomic DNA, chromosome 21q, section 37/105 Length = 340000 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 534 ggtgttcatccgcttgcggaggaagcggaggtacttca 571 |||||||||||||||||||||||| | |||||||||| Sbjct: 108060 ggtgttcatccgcttgcggaggaaacccaggtacttca 108023 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 108362 cttggctttctctttcctcttctcctccag 108333
>dbj|AB082924.1| Homo sapiens RPL13a mRNA for ribosomal protein L13a, complete cds Length = 974 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 49 ttggtgttcatccgcttgcggaggaa 24 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 350 cttggctttctctttcctcttctcctccag 321
>emb|AL031983.2|HS271M21 Human DNA sequence from clone RP1-271M21 on chromosome 6p21.31-22.2 Contains a MAS1 oncogene pseudogene, the OR2H2 gene for olfactory receptor 2H2, olfactory receptor 2I1 and 2H5 pseudogenes OR2I1P and OR2H5P, the gene for diubiquitin, an RPL13A (60S Ribosomal Protein L13A) pseudogene, the GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor 1 and an SMT3H1 or SMT3H2 (SMT3 (suppressor of mif two 3, yeast) homolog) pseudogene and three CpG islands, complete sequence Length = 134292 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 534 ggtgttcatccgcttgcggaggaagcggaggtacttca 571 ||||||||||||||||||||| |||| |||||||||| Sbjct: 79009 ggtgttcatccgcttgcggagaaagcccaggtacttca 78972 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttct 253 ||||||||||||||||||||||| Sbjct: 79300 cttggccttctccttcctcttct 79278 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcc 255 ||||| ||||||||||||||||||| Sbjct: 77911 cttggtcttctccttcctcttctcc 77887
>gb|BC032107.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone IMAGE:4644246) Length = 1139 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 205 ttggtgttcatccgcttgcggaggaa 180 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 506 cttggctttctctttcctcttctcctccag 477
>gb|BC001836.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:4241 IMAGE:2961667), complete cds Length = 694 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 197 ttggtgttcatccgcttgcggaggaa 172 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 498 cttggctttctctttcctcttctcctccag 469
>gb|BC001675.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:2546 IMAGE:2961667), complete cds Length = 694 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 197 ttggtgttcatccgcttgcggaggaa 172 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 498 cttggctttctctttcctcttctcctccag 469
>emb|X56933.1|BTAPAS B.taurus mRNA, alternative polyadenylation signals Length = 1101 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 ||||||||||||||| |||||||||||||| Sbjct: 493 cttggccttctcctttctcttctcctccag 464 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggag 554 ||||||||||||||||||||||| Sbjct: 192 ttggtgttcatccgcttgcggag 170
>dbj|AP001340.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B2289H10, LL56-APP region, complete sequence Length = 58771 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 534 ggtgttcatccgcttgcggaggaagcggaggtacttca 571 |||||||||||||||||||||||| | |||||||||| Sbjct: 44869 ggtgttcatccgcttgcggaggaaacccaggtacttca 44832 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 45171 cttggctttctctttcctcttctcctccag 45142
>dbj|AB028893.1| Homo sapiens RPL13A, U32, U33, U34, U35, RPS11, U35 genes for ribosomal protein L13a and S11, U32, U33, U34, U35, and U35 snoRNA, complete cds and sequence Length = 13208 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||||| Sbjct: 3694 ttggtgttcatccgcttgcggaggaa 3669 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 4698 cttggctttctctttcctcttctcctccag 4669
>ref|NM_001016486.2| Xenopus tropicalis hypothetical protein LOC549240 (LOC549240), mRNA Length = 771 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctcca 259 ||||||||||||||| ||||||||||||| Sbjct: 584 cttggccttctcctttctcttctcctcca 556
>gb|AC006043.1| Homo sapiens BAC clone RP11-538D15 from 7, complete sequence Length = 189036 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcc 255 ||||||||||||||||||||||||| Sbjct: 115153 cttggccttctccttcctcttctcc 115129
>gb|AC025165.27| Homo sapiens 12 BAC RP11-571M6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 211544 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 533 tggtgttcatccgcttgcggaggaa 557 ||||||||||||||||||||||||| Sbjct: 68776 tggtgttcatccgcttgcggaggaa 68752 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| |||||||||| |||||||||||| Sbjct: 69055 cttggctttctccttccccttctcctccag 69026
>emb|AL356120.10| Human DNA sequence from clone RP11-365K22 on chromosome 13 Contains a novel gene similar to ribosomal protein L13a (RPL13A), complete sequence Length = 83727 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 533 tggtgttcatccgcttgcggaggaa 557 ||||||||||||||||||||||||| Sbjct: 13586 tggtgttcatccgcttgcggaggaa 13610 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 13284 cttggctttctctttcctcttctcctccag 13313
>emb|CR859183.1| Pongo pygmaeus mRNA; cDNA DKFZp469O181 (from clone DKFZp469O181) Length = 772 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 533 tggtgttcatccgcttgcggaggaa 557 ||||||||||||||||||||||||| Sbjct: 216 tggtgttcatccgcttgcggaggaa 192 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 518 cttggctttctctttcctcttctcctccag 489
>gb|DP000062.1| Sus scrofa target 117 genomic scaffold Length = 605739 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcc 255 ||||||||||||||||||||||||| Sbjct: 206963 cttggccttctccttcctcttctcc 206939 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 535 gtgttcatccgcttgcggaggaag 558 ||||||||||||||||||| |||| Sbjct: 206680 gtgttcatccgcttgcggaagaag 206657
>ref|XR_000921.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein, transcript variant 1 (LOC387930), misc RNA Length = 590 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 533 tggtgttcatccgcttgcggaggaa 557 ||||||||||||||||||||||||| Sbjct: 129 tggtgttcatccgcttgcggaggaa 105 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 431 cttggctttctctttcctcttctcctccag 402
>ref|XR_000922.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein, transcript variant 2 (LOC387930), misc RNA Length = 688 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 533 tggtgttcatccgcttgcggaggaa 557 ||||||||||||||||||||||||| Sbjct: 218 tggtgttcatccgcttgcggaggaa 194 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 520 cttggctttctctttcctcttctcctccag 491
>ref|XR_000923.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein, transcript variant 3 (LOC387930), misc RNA Length = 605 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 533 tggtgttcatccgcttgcggaggaa 557 ||||||||||||||||||||||||| Sbjct: 210 tggtgttcatccgcttgcggaggaa 186 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 446 cttggctttctctttcctcttctcctccag 417
>ref|NM_203308.1| Homo sapiens ribosomal protein L13A-like (MGC34774), mRNA Length = 1848 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcc 255 ||||||||||||||||||||||||| Sbjct: 1096 cttggccttctccttcctcttctcc 1072
>ref|XM_942899.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC642209), mRNA Length = 590 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 533 tggtgttcatccgcttgcggaggaa 557 ||||||||||||||||||||||||| Sbjct: 129 tggtgttcatccgcttgcggaggaa 105 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 431 cttggctttctctttcctcttctcctccag 402
>ref|XM_936630.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC642209), mRNA Length = 688 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 533 tggtgttcatccgcttgcggaggaa 557 ||||||||||||||||||||||||| Sbjct: 218 tggtgttcatccgcttgcggaggaa 194 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 520 cttggctttctctttcctcttctcctccag 491
>ref|XM_942891.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC642209), mRNA Length = 605 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 533 tggtgttcatccgcttgcggaggaa 557 ||||||||||||||||||||||||| Sbjct: 210 tggtgttcatccgcttgcggaggaa 186 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 446 cttggctttctctttcctcttctcctccag 417
>gb|AC148698.1| Macaca mulatta Major Histocompatibility Complex BAC MMU268P23, complete sequence Length = 185838 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcc 255 ||||||||||||||||||||||||| Sbjct: 9142 cttggccttctccttcctcttctcc 9118
>gb|AC148689.1| Macaca mulatta Major Histocompatibility Complex BAC MMU222I18, complete sequence Length = 174202 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcc 255 ||||||||||||||||||||||||| Sbjct: 106204 cttggccttctccttcctcttctcc 106180
>gb|BC027852.1| Homo sapiens ribosomal protein L13A-like, mRNA (cDNA clone MGC:34774 IMAGE:5207622), complete cds Length = 1848 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcc 255 ||||||||||||||||||||||||| Sbjct: 1096 cttggccttctccttcctcttctcc 1072
>emb|CR760846.2| Xenopus tropicalis finished cDNA, clone TTpA004d22 Length = 771 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctcca 259 ||||||||||||||| ||||||||||||| Sbjct: 584 cttggccttctcctttctcttctcctcca 556
>gb|BC052385.1| Mus musculus chromodomain helicase DNA binding protein 1-like, mRNA (cDNA clone MGC:57944 IMAGE:5703859), complete cds Length = 3018 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 236 ccttctccttcctcttctcctcca 259 |||||||||||||||||||||||| Sbjct: 2014 ccttctccttcctcttctcctcca 1991
>ref|NM_026539.1| Mus musculus chromodomain helicase DNA binding protein 1-like (Chd1l), mRNA Length = 2991 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 236 ccttctccttcctcttctcctcca 259 |||||||||||||||||||||||| Sbjct: 2032 ccttctccttcctcttctcctcca 2009
>ref|XR_002787.1| PREDICTED: Mus musculus similar to ribosomal protein L13a (LOC624863), mRNA Length = 632 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 229 accttggccttctccttcctcttctcctccag 260 ||||||||||||||||||| ||||||||||| Sbjct: 517 accttggccttctccttccgtttctcctccag 486
>ref|XR_004732.1| PREDICTED: Mus musculus similar to ribosomal protein L13a (LOC624863), mRNA Length = 632 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 229 accttggccttctccttcctcttctcctccag 260 ||||||||||||||||||| ||||||||||| Sbjct: 517 accttggccttctccttccgtttctcctccag 486
>gb|AC130541.4| Mus musculus BAC clone RP24-124P9 from chromosome 3, complete sequence Length = 191814 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 236 ccttctccttcctcttctcctcca 259 |||||||||||||||||||||||| Sbjct: 25560 ccttctccttcctcttctcctcca 25583
>gb|BC020486.1| Mus musculus chromodomain helicase DNA binding protein 1-like, mRNA (cDNA clone IMAGE:3708149) Length = 1179 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 236 ccttctccttcctcttctcctcca 259 |||||||||||||||||||||||| Sbjct: 202 ccttctccttcctcttctcctcca 179
>gb|AC121768.2| Mus musculus BAC clone RP23-339H16 from 15, complete sequence Length = 199607 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 235 gccttctccttcctcttctcctcc 258 |||||||||||||||||||||||| Sbjct: 60994 gccttctccttcctcttctcctcc 61017
>gb|AC005099.2| Homo sapiens BAC clone CTA-351J1 from 7, complete sequence Length = 131611 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaagcggaggtacttca 571 |||||||||||| |||||||||||||| |||||||||| Sbjct: 58426 ttggtgttcatctgcttgcggaggaagaccaggtacttca 58387 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcct 256 |||||| ||||||||||||||||||| Sbjct: 58725 cttggctttctccttcctcttctcct 58700
>gb|BC057567.1| Mus musculus chromodomain helicase DNA binding protein 1-like, mRNA (cDNA clone MGC:66868 IMAGE:6415898), complete cds Length = 3037 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 236 ccttctccttcctcttctcctcca 259 |||||||||||||||||||||||| Sbjct: 2043 ccttctccttcctcttctcctcca 2020
>ref|XM_945533.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 8 (LOC649564), mRNA Length = 1112 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 534 ggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||| Sbjct: 193 ggtgttcatccgcttgcggaggaa 170 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 497 cttggctttctctttcctcttctcctccag 468
>ref|XM_945532.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 7 (LOC649564), mRNA Length = 671 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 534 ggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||| Sbjct: 215 ggtgttcatccgcttgcggaggaa 192 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 519 cttggctttctctttcctcttctcctccag 490
>ref|XM_945529.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 6 (LOC649564), mRNA Length = 681 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 534 ggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||| Sbjct: 215 ggtgttcatccgcttgcggaggaa 192 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 519 cttggctttctctttcctcttctcctccag 490
>ref|XM_945527.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC649564), mRNA Length = 688 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 534 ggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||| Sbjct: 215 ggtgttcatccgcttgcggaggaa 192 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 519 cttggctttctctttcctcttctcctccag 490
>ref|XM_945523.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC649564), mRNA Length = 1052 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 534 ggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||| Sbjct: 133 ggtgttcatccgcttgcggaggaa 110 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 437 cttggctttctctttcctcttctcctccag 408
>ref|XM_945522.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC649564), mRNA Length = 1134 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 534 ggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||| Sbjct: 215 ggtgttcatccgcttgcggaggaa 192 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 519 cttggctttctctttcctcttctcctccag 490
>ref|XM_941896.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC649564), mRNA Length = 668 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 534 ggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||| Sbjct: 214 ggtgttcatccgcttgcggaggaa 191 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 518 cttggctttctctttcctcttctcctccag 489
>ref|XM_945517.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC649564), mRNA Length = 1067 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 534 ggtgttcatccgcttgcggaggaa 557 |||||||||||||||||||||||| Sbjct: 214 ggtgttcatccgcttgcggaggaa 191 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 452 cttggctttctctttcctcttctcctccag 423
>dbj|AK165656.1| Mus musculus kidney CCL-142 RAG cDNA, RIKEN full-length enriched library, clone:G430108O15 product:chromodomain helicase DNA binding protein 1-like, full insert sequence Length = 2716 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 236 ccttctccttcctcttctcctcca 259 |||||||||||||||||||||||| Sbjct: 2057 ccttctccttcctcttctcctcca 2034
>gb|AC121357.14| Mus musculus chromosome 15, clone RP23-56D7, complete sequence Length = 177867 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 229 accttggccttctccttcctcttctcctccag 260 ||||||||||||||||||| ||||||||||| Sbjct: 124043 accttggccttctccttccgtttctcctccag 124074
>dbj|AK014473.1| Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:4432404A22 product:CDNA FLJ10480 FIS, CLONE NT2RP2000126, WEAKLY SIMILAR TO POSSIBLE GLOBAL TRANSCRIPTION ACTIVATOR SNF2L (FRAGMENT) homolog [Homo sapiens], full insert sequence Length = 2991 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 236 ccttctccttcctcttctcctcca 259 |||||||||||||||||||||||| Sbjct: 2032 ccttctccttcctcttctcctcca 2009
>gb|AC140839.9| Mus musculus chromosome 3, clone RP24-316D12, complete sequence Length = 168722 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 236 ccttctccttcctcttctcctcca 259 |||||||||||||||||||||||| Sbjct: 69068 ccttctccttcctcttctcctcca 69045
>gb|BC062966.1| Mus musculus chromodomain helicase DNA binding protein 1-like, mRNA (cDNA clone MGC:64788 IMAGE:6415898), complete cds Length = 3066 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 236 ccttctccttcctcttctcctcca 259 |||||||||||||||||||||||| Sbjct: 2043 ccttctccttcctcttctcctcca 2020
>gb|BC047855.1| Danio rerio ribosomal protein L13a, mRNA (cDNA clone MGC:56275 IMAGE:5602342), complete cds Length = 819 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccagt 261 ||||||||| ||||| ||||||||||||||| Sbjct: 604 cttggccttttcctttctcttctcctccagt 574
>ref|XM_848715.1| PREDICTED: Canis familiaris similar to IQ motif containing D (LOC611081), mRNA Length = 1574 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 230 ccttggccttctccttcctcttctcct 256 |||||||||||||||||| |||||||| Sbjct: 1423 ccttggccttctccttccccttctcct 1397
>gb|AC132349.3| Mus musculus BAC clone RP24-82B7 from chromosome 16, complete sequence Length = 216783 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 236 ccttctccttcctcttctcctcc 258 ||||||||||||||||||||||| Sbjct: 49266 ccttctccttcctcttctcctcc 49288
>emb|AL627070.16| Mouse DNA sequence from clone RP23-353E13 on chromosome 11 Contains a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, wo novel genes and a CpG island, complete sequence Length = 210813 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 236 ccttctccttcctcttctcctcc 258 ||||||||||||||||||||||| Sbjct: 102368 ccttctccttcctcttctcctcc 102390
>gb|AC114791.3| Homo sapiens BAC clone RP11-658B24 from 4, complete sequence Length = 113268 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 236 ccttctccttcctcttctcctcc 258 ||||||||||||||||||||||| Sbjct: 96683 ccttctccttcctcttctcctcc 96705
>gb|AC104306.2| Homo sapiens chromosome 3 clone RP11-524O15, complete sequence Length = 197110 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 236 ccttctccttcctcttctcctcc 258 ||||||||||||||||||||||| Sbjct: 131049 ccttctccttcctcttctcctcc 131071
>ref|XM_703004.1| PREDICTED: Danio rerio similar to Ribosomal protein L13a, transcript variant 2 (LOC560828), mRNA Length = 1065 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccagt 261 ||||||||| ||||| ||||||||||||||| Sbjct: 598 cttggccttttcctttctcttctcctccagt 568
>ref|XM_680687.1| PREDICTED: Danio rerio similar to Ribosomal protein L13a, transcript variant 1 (LOC560828), mRNA Length = 774 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccagt 261 ||||||||| ||||| ||||||||||||||| Sbjct: 598 cttggccttttcctttctcttctcctccagt 568
>gb|AC026384.19|AC026384 Mus musculus 11 BAC RP23-390D17 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 177428 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 236 ccttctccttcctcttctcctcc 258 ||||||||||||||||||||||| Sbjct: 20024 ccttctccttcctcttctcctcc 20046
>emb|BX005435.16| Zebrafish DNA sequence from clone CH211-154E15 in linkage group 17, complete sequence Length = 166247 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 231 cttggccttctccttcctcttctcctccagt 261 ||||||||| ||||| ||||||||||||||| Sbjct: 20887 cttggccttttcctttctcttctcctccagt 20917
>gb|AC147314.4| Pan troglodytes BAC clone RP43-50A6 from chromosome 7, complete sequence Length = 176459 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaag 558 |||||||||||| |||||||||||||| Sbjct: 90287 ttggtgttcatctgcttgcggaggaag 90261 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcct 256 |||||| ||||||||||||||||||| Sbjct: 90580 cttggctttctccttcctcttctcct 90555
>gb|AC140306.3| Mus musculus BAC clone RP23-386L13 from 8, complete sequence Length = 220059 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 236 ccttctccttcctcttctcctcc 258 ||||||||||||||||||||||| Sbjct: 18616 ccttctccttcctcttctcctcc 18594
>emb|CR626962.9| Zebrafish DNA sequence from clone CH211-15D5 in linkage group 17, complete sequence Length = 117015 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccagt 261 ||||||||| ||||| ||||||||||||||| Sbjct: 3384 cttggccttttcctttctcttctcctccagt 3354
>ref|NM_212784.1| Danio rerio ribosomal protein L13a (rpl13a), mRNA Length = 819 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccagt 261 ||||||||| ||||| ||||||||||||||| Sbjct: 604 cttggccttttcctttctcttctcctccagt 574
>ref|XM_520754.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC465300), mRNA Length = 680 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 517 cttggctttctctttcctcttctcctccag 488 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 536 tgttcatccgcttgcggaggaa 557 |||||||||||||||||||||| Sbjct: 212 tgttcatccgcttgcggaggaa 191
>gb|DQ216005.1| Taeniopygia guttata clone 0058P0011D10 ribosomal protein L13A-like mRNA, complete sequence Length = 798 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 235 gccttctccttcctcttctcctccag 260 ||||||||||||| |||||||||||| Sbjct: 529 gccttctccttccgcttctcctccag 504
>gb|DQ216004.1| Taeniopygia guttata clone 0058P0006F05 ribosomal protein L13A-like mRNA, complete sequence Length = 804 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 235 gccttctccttcctcttctcctccag 260 ||||||||||||| |||||||||||| Sbjct: 529 gccttctccttccgcttctcctccag 504
>gb|DQ216002.1| Taeniopygia guttata clone 0058P0010A09 ribosomal protein L13A-like mRNA, complete sequence Length = 739 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 235 gccttctccttcctcttctcctccag 260 ||||||||||||| |||||||||||| Sbjct: 469 gccttctccttccgcttctcctccag 444
>gb|DQ216000.1| Taeniopygia guttata clone 0058P0016A02 ribosomal protein L13A-like mRNA, complete sequence Length = 799 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 235 gccttctccttcctcttctcctccag 260 ||||||||||||| |||||||||||| Sbjct: 529 gccttctccttccgcttctcctccag 504
>ref|XM_866179.1| PREDICTED: Bos taurus similar to ribosomal protein L13a (LOC614617), mRNA Length = 911 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcgga 553 |||||||||||||||||||||| Sbjct: 329 ttggtgttcatccgcttgcgga 308
>gb|AC145993.3| Pan troglodytes BAC clone RP43-178E21 from 7, complete sequence Length = 176561 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 cttggccttctccttcctcttctcctccag 260 ||||||||||||| ||||||||||| |||| Sbjct: 93566 cttggccttctccgtcctcttctcccccag 93537
>gb|DQ084040.1| Oxyuranus scutellatus 60S ribosomal protein L13a mRNA, partial cds Length = 664 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 532 ttggtgttcatccgcttgcggaggaa 557 ||||||||||| |||||||||||||| Sbjct: 143 ttggtgttcatacgcttgcggaggaa 118
>ref|XR_002869.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L13a (Transplantation antigen P198) (Tum-P198 antigen) (LOC547166), mRNA Length = 631 Score = 44.1 bits (22), Expect = 0.51 Identities = 37/42 (88%) Strand = Plus / Minus Query: 450 cgtcttgtgcgggatcatgccgcgcacggtgcgccagaaaat 491 ||||||||| || | |||||| ||||| |||||||||||||| Sbjct: 276 cgtcttgtggggcagcatgcctcgcacagtgcgccagaaaat 235
>gb|AC183838.2| Pan troglodytes BAC clone CH251-11K10 from chromosome 7, complete sequence Length = 153555 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 cttctccttcctcttctcctccagtt 262 ||||||||||||| |||||||||||| Sbjct: 11844 cttctccttcctcctctcctccagtt 11869
>gb|AC004845.2| Homo sapiens PAC clone RP4-635O5 from 7, complete sequence Length = 69847 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 cttctccttcctcttctcctccagtt 262 ||||||||||||| |||||||||||| Sbjct: 14148 cttctccttcctcctctcctccagtt 14173
>gb|AC142289.1| Pan troglodytes BAC clone RP43-179F19 from 7, complete sequence Length = 182617 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 231 cttggccttctccttcctcttctcctccag 260 ||||||||||||| ||||||||||| |||| Sbjct: 57562 cttggccttctccgtcctcttctcccccag 57591
>gb|AC007688.15| Homo sapiens 12 BAC RPCI11-392P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161577 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 536 tgttcatccgcttgcggaggaa 557 |||||||||||||||||||||| Sbjct: 131706 tgttcatccgcttgcggaggaa 131727 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 231 cttggccttctccttcctcttctcctccag 260 |||||| ||||| ||||||||||||||||| Sbjct: 131401 cttggctttctctttcctcttctcctccag 131430
>gb|AC093286.3| Homo sapiens chromosome 5 clone RP11-456A14, complete sequence Length = 145047 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 532 ttggtgttcatccgcttgcggaggaa 557 |||||||||||||||||| ||||||| Sbjct: 9181 ttggtgttcatccgcttgtggaggaa 9206
>gb|AC026477.3| Homo sapiens chromosome 5 clone RP11-94D20, complete sequence Length = 70380 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 231 cttggccttctccttcctcttctcctccag 260 ||||||||||||||| |||||||| ||||| Sbjct: 48856 cttggccttctccttactcttctcttccag 48885
>gb|AC152396.4| Mus musculus chromosome 18, clone RP23-175I15, complete sequence Length = 185947 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 237 cttctccttcctcttctcctcc 258 |||||||||||||||||||||| Sbjct: 32339 cttctccttcctcttctcctcc 32318
>gb|AC010811.20| Homo sapiens chromosome 11, clone RP11-3E17, complete sequence Length = 149205 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 236 ccttctccttcctcttctcctc 257 |||||||||||||||||||||| Sbjct: 9434 ccttctccttcctcttctcctc 9455
>gb|AC182639.3| Pan troglodytes BAC clone CH251-322N11 from chromosome 7, complete sequence Length = 162580 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 cttctccttcctcttctcctccagtt 262 ||||||||||||| |||||||||||| Sbjct: 134495 cttctccttcctcctctcctccagtt 134520 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,492,523 Number of Sequences: 3902068 Number of extensions: 4492523 Number of successful extensions: 126215 Number of sequences better than 10.0: 508 Number of HSP's better than 10.0 without gapping: 507 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 124423 Number of HSP's gapped (non-prelim): 1768 length of query: 585 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 562 effective length of database: 17,143,297,704 effective search space: 9634533309648 effective search space used: 9634533309648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)