ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63l21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
2dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
3dbj|AK101456.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
4dbj|AK065467.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
5ref|NM_188410.1| Oryza sativa (japonica cultivar-group), Ozsa813... 48 0.029
6gb|AC159224.6| Mus musculus chromosome 8, clone RP24-180O7, comp... 44 0.45
7dbj|AB078559.1| Cryptocercus kyebangi mitochondrial gene, partia... 44 0.45
8ref|XM_630886.1| Dictyostelium discoideum hypothetical protein (... 42 1.8
9gb|AC111097.10| Mus musculus chromosome 3, clone RP23-174G7, com... 42 1.8
10emb|BX936312.12| Zebrafish DNA sequence from clone DKEY-204O5 in... 42 1.8
11gb|AC126556.4| Mus musculus BAC clone RP23-64L3 from chromosome ... 42 1.8
12emb|CR708348.2|CNS0G9IG Tetraodon nigroviridis full-length cDNA 42 1.8
13emb|CR762392.5| Zebrafish DNA sequence from clone DKEY-265A11 in... 42 1.8
14ref|XM_791342.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 1.8
15gb|AC157572.4| Mus musculus BAC clone RP23-79O10 from chromosome... 42 1.8
16emb|AL929352.1|PFA929352 Plasmodium falciparum strain 3D7, chrom... 42 1.8
17emb|BX649366.5| Zebrafish DNA sequence from clone DKEY-16I5 in l... 42 1.8
18gb|AC159323.3| Mus musculus BAC clone RP23-6I8 from chromosome 1... 42 1.8
19gb|AC097063.2| Homo sapiens chromosome 1 clone RP11-430H12, comp... 42 1.8
20emb|CR450697.3| Zebrafish DNA sequence from clone CH211-284F22 i... 42 1.8
21dbj|AK141717.1| Mus musculus 9 days embryo whole body cDNA, RIKE... 42 1.8
22emb|BX323878.10| Zebrafish DNA sequence from clone CH211-57E23 i... 42 1.8
23gb|AC119800.2| Homo sapiens chromosome 1 clone RP4-630A11, compl... 42 1.8
24gb|AC153492.5| Mus musculus 10 BAC RP23-292N5 (Roswell Park Canc... 42 1.8
25gb|AC161591.2| Mus musculus BAC clone RP24-270I4 from chromosome... 42 1.8
26emb|AL807823.6| Mouse DNA sequence from clone RP23-328E6 on chro... 42 1.8
27emb|AL731734.13| Mouse DNA sequence from clone RP23-26C7 on chro... 42 1.8
28ref|XM_633937.1| Dictyostelium discoideum hypothetical protein (... 40 7.1
29ref|XM_631299.1| Dictyostelium discoideum hypothetical protein (... 40 7.1
30gb|AC122737.7| Mus musculus chromosome 3, clone RP23-302O3, comp... 40 7.1
31gb|BC024325.1| Homo sapiens KIAA0828 protein, mRNA (cDNA clone M... 40 7.1
32gb|AC006833.2| Caenorhabditis elegans cosmid ZK616, complete seq... 40 7.1
33gb|AC157818.5| Mus musculus chromosome 3, clone RP24-268H11, com... 40 7.1
34emb|CT025600.8| Mouse DNA sequence from clone RP24-120I22 on chr... 40 7.1
35emb|CT009767.6| Mouse DNA sequence from clone RP23-24A13 on chro... 40 7.1
36ref|XM_532429.2| PREDICTED: Canis familiaris similar to Putative... 40 7.1
37ref|XM_843933.1| PREDICTED: Canis familiaris similar to Putative... 40 7.1
38emb|CT009535.6| M.truncatula DNA sequence from clone MTH2-68D12 ... 40 7.1
39gb|AC124728.5| Mus musculus BAC clone RP23-470C22 from chromosom... 40 7.1
40gb|AC125155.4| Mus musculus BAC clone RP24-380D9 from chromosome... 40 7.1
41gb|AC127245.5| Mus musculus BAC clone RP24-422M4 from chromosome... 40 7.1
42gb|AC117243.3| Mus musculus BAC clone RP24-198D9 from 9, complet... 40 7.1
43ref|XM_722872.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 7.1
44ref|XM_720206.1| Plasmodium yoelii yoelii str. 17XNL erythrocyte... 40 7.1
45gb|AC010908.3| Homo sapiens BAC clone CTD-3073A19 from 7, comple... 40 7.1
46ref|XM_732224.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 7.1
47ref|XM_666233.1| Plasmodium berghei strain ANKA hypothetical pro... 40 7.1
48ref|XM_673337.1| Plasmodium berghei strain ANKA bromodomain prot... 40 7.1
49gb|AC137077.26| Medicago truncatula clone mth2-8g15, complete se... 40 7.1
50emb|Z84466.2|HS230G1 Human DNA sequence from clone RP1-230G1 on ... 40 7.1
51emb|AL606826.4| Human DNA sequence from clone RP11-154G15 on chr... 40 7.1
52gb|AC140119.3| Homo sapiens 3 BAC RP11-747D18 (Roswell Park Canc... 40 7.1
53emb|AL591426.17| Mouse DNA sequence from clone RP23-345E8 on chr... 40 7.1
54emb|CR859865.1| Pongo pygmaeus mRNA; cDNA DKFZp469J024 (from clo... 40 7.1
55emb|BX470207.6| Zebrafish DNA sequence from clone CH211-116A8 in... 40 7.1
56gb|AC114287.2| Homo sapiens chromosome 5 clone CTD-2350L11, comp... 40 7.1
57gb|AC009244.25| Homo sapiens chromosome 7 clone RP11-305M3, comp... 40 7.1
58gb|AC012417.13| Homo sapiens chromosome 18, clone RP11-408H20, c... 40 7.1
59dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 40 7.1
60gb|AC091917.3| Homo sapiens chromosome 5 clone RP11-231G15, comp... 40 7.1
61ref|NM_015328.1| Homo sapiens KIAA0828 protein (KIAA0828), mRNA 40 7.1
62gb|AC132308.4| Mus musculus BAC clone RP24-292O13 from chromosom... 40 7.1
63gb|AC147892.2| Xenopus tropicalis clone CH216-35D21, complete se... 40 7.1
64dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
65dbj|AP005709.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
66gb|CP000016.1| Candidatus Blochmannia pennsylvanicus str. BPEN, ... 40 7.1
67emb|X68896.1|CHCIRRNX4 Chloroplast Chlamydomonas indica rrnL gen... 40 7.1
68gb|AF050157.1|MMHC135G15 Mus musculus major histocompatibility l... 40 7.1
69emb|BX000989.10| Mouse DNA sequence from clone RP23-33D17 on chr... 40 7.1
70gb|AC164122.5| Mus musculus BAC clone RP24-409O23 from chromosom... 40 7.1
71gb|U01337.1|HSU01337 Human Ser/Thr protein kinase (A-RAF-1) gene... 40 7.1
72emb|AL840626.7| Mouse DNA sequence from clone RP23-151M8 on chro... 40 7.1
73gb|L24038.1|HUMARAF1G Human murine sarcoma 3611 viral (v-raf) on... 40 7.1
74dbj|AB020635.1| Homo sapiens mRNA for KIAA0828 protein, partial cds 40 7.1 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                 
Query: 475     agttagtgcggggctggattgggtgttcggaactgatagaaatgaggtgc 524
               ||||||||  |||| ||||||||||| ||||||||||| ||||| |||||
Sbjct: 6124031 agttagtgaagggcaggattgggtgtccggaactgataaaaatgtggtgc 6123982
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>dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0031E09
          Length = 176349

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 475    agttagtgcggggctggattgggtgttcggaactgatagaaatgaggtgc 524
              ||||||||  |||| ||||||||||| ||||||||||| ||||| |||||
Sbjct: 148388 agttagtgaagggcaggattgggtgtccggaactgataaaaatgtggtgc 148339
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>dbj|AK101456.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040B09, full
            insert sequence
          Length = 2581

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 475  agttagtgcggggctggattgggtgttcggaactgatagaaatgaggtgc 524
            ||||||||  |||| ||||||||||| ||||||||||| ||||| |||||
Sbjct: 2186 agttagtgaagggcaggattgggtgtccggaactgataaaaatgtggtgc 2137
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>dbj|AK065467.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013020I01, full
            insert sequence
          Length = 2866

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 475  agttagtgcggggctggattgggtgttcggaactgatagaaatgaggtgc 524
            ||||||||  |||| ||||||||||| ||||||||||| ||||| |||||
Sbjct: 2344 agttagtgaagggcaggattgggtgtccggaactgataaaaatgtggtgc 2295
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>ref|NM_188410.1| Oryza sativa (japonica cultivar-group), Ozsa8136 predicted mRNA
          Length = 1542

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 485  gggctggattgggtgttcggaactgatagaaatgaggtgc 524
            |||| ||||||||||| ||||||||||| ||||| |||||
Sbjct: 1534 gggcaggattgggtgtccggaactgataaaaatgtggtgc 1495
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>gb|AC159224.6| Mus musculus chromosome 8, clone RP24-180O7, complete sequence
          Length = 171002

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 113   tttctggaataaattttcaaatgata 138
             ||||||||||||| ||||||||||||
Sbjct: 88561 tttctggaataaagtttcaaatgata 88586
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>dbj|AB078559.1| Cryptocercus kyebangi mitochondrial gene, partial sequence
          Length = 408

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 120 aataaattttcaaatgataaaaaatatcat 149
           ||||||||||||||| | ||||||||||||
Sbjct: 118 aataaattttcaaattaaaaaaaatatcat 147
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>ref|XM_630886.1| Dictyostelium discoideum hypothetical protein (DDB0219503), partial
           mRNA
          Length = 1452

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 121 ataaattttcaaatgataaaa 141
           |||||||||||||||||||||
Sbjct: 93  ataaattttcaaatgataaaa 73
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>gb|AC111097.10| Mus musculus chromosome 3, clone RP23-174G7, complete sequence
          Length = 206043

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 123   aaattttcaaatgataaaaaatatc 147
             ||||||| |||||||||||||||||
Sbjct: 85920 aaattttgaaatgataaaaaatatc 85896
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>emb|BX936312.12| Zebrafish DNA sequence from clone DKEY-204O5 in linkage group 7,
             complete sequence
          Length = 158510

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 111   tttttctggaataaattttca 131
             |||||||||||||||||||||
Sbjct: 55999 tttttctggaataaattttca 55979



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 111   tttttctggaataaattttca 131
             |||||||||||||||||||||
Sbjct: 54789 tttttctggaataaattttca 54769
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>gb|AC126556.4| Mus musculus BAC clone RP23-64L3 from chromosome 15, complete sequence
          Length = 179685

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 146   tcatctgtgtttatgtctttg 166
             |||||||||||||||||||||
Sbjct: 94968 tcatctgtgtttatgtctttg 94988
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>emb|CR708348.2|CNS0G9IG Tetraodon nigroviridis full-length cDNA
          Length = 477

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 109 gatttttctggaataaatttt 129
           |||||||||||||||||||||
Sbjct: 450 gatttttctggaataaatttt 470
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>emb|CR762392.5| Zebrafish DNA sequence from clone DKEY-265A11 in linkage group 8,
             complete sequence
          Length = 203490

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 333   aagatggaagattctttctttgcct 357
             ||||||||||||| |||||||||||
Sbjct: 60940 aagatggaagattatttctttgcct 60964
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>ref|XM_791342.1| PREDICTED: Strongylocentrotus purpuratus similar to CG31534-PA,
           isoform A (LOC591791), mRNA
          Length = 3933

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 338 ggaagattctttctttgcctc 358
           |||||||||||||||||||||
Sbjct: 831 ggaagattctttctttgcctc 851
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>gb|AC157572.4| Mus musculus BAC clone RP23-79O10 from chromosome 14, complete sequence
          Length = 242759

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 120    aataaattttcaaatgataaaaaatatca 148
              |||||||||| |||||| |||||||||||
Sbjct: 119546 aataaattttaaaatgaaaaaaaatatca 119574
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>emb|AL929352.1|PFA929352 Plasmodium falciparum strain 3D7, chromosome 5, segment 2/4
          Length = 313050

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 126    ttttcaaatgataaaaaatat 146
              |||||||||||||||||||||
Sbjct: 225915 ttttcaaatgataaaaaatat 225935
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>emb|BX649366.5| Zebrafish DNA sequence from clone DKEY-16I5 in linkage group 12, complete
              sequence
          Length = 222310

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 125    attttcaaatgataaaaaatatcatctgt 153
              |||||||||| ||| ||||||||||||||
Sbjct: 219716 attttcaaattatataaaatatcatctgt 219688
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>gb|AC159323.3| Mus musculus BAC clone RP23-6I8 from chromosome 14, complete sequence
          Length = 223640

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 120   aataaattttcaaatgataaaaaatatca 148
             |||||||||| |||||| |||||||||||
Sbjct: 18651 aataaattttaaaatgaaaaaaaatatca 18623
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>gb|AC097063.2| Homo sapiens chromosome 1 clone RP11-430H12, complete sequence
          Length = 183086

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 121   ataaattttcaaatgataaaaaata 145
             ||||||||| |||||||||||||||
Sbjct: 23770 ataaatttttaaatgataaaaaata 23746
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>emb|CR450697.3| Zebrafish DNA sequence from clone CH211-284F22 in linkage group 5,
             complete sequence
          Length = 143752

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 116   ctggaataaattttcaaatgataaa 140
             |||||||||||||| ||||||||||
Sbjct: 12731 ctggaataaatttttaaatgataaa 12707
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>dbj|AK141717.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:D030040F20 product:hypothetical
            protein, full insert sequence
          Length = 2866

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 257  acaggatagcaccttaagtccaaat 281
            ||||||||||| |||||||||||||
Sbjct: 1127 acaggatagcagcttaagtccaaat 1103
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>emb|BX323878.10| Zebrafish DNA sequence from clone CH211-57E23 in linkage group 12,
              complete sequence
          Length = 190541

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 125    attttcaaatgataaaaaatatcatctgt 153
              |||||||||| ||| ||||||||||||||
Sbjct: 164725 attttcaaattatataaaatatcatctgt 164753
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>gb|AC119800.2| Homo sapiens chromosome 1 clone RP4-630A11, complete sequence
          Length = 161112

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 121    ataaattttcaaatgataaaaaata 145
              ||||||||| |||||||||||||||
Sbjct: 134761 ataaatttttaaatgataaaaaata 134737
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>gb|AC153492.5| Mus musculus 10 BAC RP23-292N5 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 195237

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 333   aagatggaagattctttctttgcct 357
             |||| ||||||||||||||||||||
Sbjct: 79009 aagaaggaagattctttctttgcct 78985
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>gb|AC161591.2| Mus musculus BAC clone RP24-270I4 from chromosome 12, complete sequence
          Length = 188001

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 194   atactagtatgagcaatgcagcata 218
             |||| ||||||||||||||||||||
Sbjct: 95216 atacaagtatgagcaatgcagcata 95192
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>emb|AL807823.6| Mouse DNA sequence from clone RP23-328E6 on chromosome 4, complete
              sequence
          Length = 216239

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 257    acaggatagcaccttaagtccaaat 281
              ||||||||||| |||||||||||||
Sbjct: 147721 acaggatagcagcttaagtccaaat 147697
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>emb|AL731734.13| Mouse DNA sequence from clone RP23-26C7 on chromosome 2, complete
             sequence
          Length = 88618

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 131   aaatgataaaaaatatcatctgtgt 155
             ||||||||||| |||||||||||||
Sbjct: 52105 aaatgataaaatatatcatctgtgt 52081
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>ref|XM_633937.1| Dictyostelium discoideum hypothetical protein (DDB0185579), partial
           mRNA
          Length = 1413

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 121 ataaattttcaaatgataaa 140
           ||||||||||||||||||||
Sbjct: 953 ataaattttcaaatgataaa 972
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>ref|XM_631299.1| Dictyostelium discoideum hypothetical protein (DDB0188246), partial
           mRNA
          Length = 3246

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 103 tcaaatgatttttctggaataaat 126
           ||||||||||||| ||||||||||
Sbjct: 953 tcaaatgatttttgtggaataaat 930
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>gb|AC122737.7| Mus musculus chromosome 3, clone RP23-302O3, complete sequence
          Length = 179544

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   gtttggaaaaaactgtgcct 328
             ||||||||||||||||||||
Sbjct: 13573 gtttggaaaaaactgtgcct 13554
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>gb|BC024325.1| Homo sapiens KIAA0828 protein, mRNA (cDNA clone MGC:21525
            IMAGE:3907552), complete cds
          Length = 5052

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 112  ttttctggaataaattttca 131
            ||||||||||||||||||||
Sbjct: 2261 ttttctggaataaattttca 2280
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>gb|AC006833.2| Caenorhabditis elegans cosmid ZK616, complete sequence
          Length = 35820

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   ttttcaaatgataaaaaata 145
             ||||||||||||||||||||
Sbjct: 21511 ttttcaaatgataaaaaata 21492
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>gb|AC157818.5| Mus musculus chromosome 3, clone RP24-268H11, complete sequence
          Length = 171547

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    gtttggaaaaaactgtgcct 328
              ||||||||||||||||||||
Sbjct: 147305 gtttggaaaaaactgtgcct 147286
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>emb|CT025600.8| Mouse DNA sequence from clone RP24-120I22 on chromosome 12, complete
              sequence
          Length = 159693

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    catctgtgtttatgtctttg 166
              ||||||||||||||||||||
Sbjct: 147520 catctgtgtttatgtctttg 147539
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>emb|CT009767.6| Mouse DNA sequence from clone RP23-24A13 on chromosome 17, complete
             sequence
          Length = 221442

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 340   aagattctttctttgcctcc 359
             ||||||||||||||||||||
Sbjct: 68832 aagattctttctttgcctcc 68813
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>ref|XM_532429.2| PREDICTED: Canis familiaris similar to Putative
            adenosylhomocysteinase 3 (S-adenosyl-L-homocysteine
            hydrolase) (AdoHcyase), transcript variant 3 (LOC475197),
            mRNA
          Length = 2241

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 112  ttttctggaataaattttca 131
            ||||||||||||||||||||
Sbjct: 2162 ttttctggaataaattttca 2181
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>ref|XM_843933.1| PREDICTED: Canis familiaris similar to Putative
            adenosylhomocysteinase 3 (S-adenosyl-L-homocysteine
            hydrolase) (AdoHcyase), transcript variant 4 (LOC475197),
            mRNA
          Length = 2019

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 112  ttttctggaataaattttca 131
            ||||||||||||||||||||
Sbjct: 1940 ttttctggaataaattttca 1959
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>emb|CT009535.6| M.truncatula DNA sequence from clone MTH2-68D12 on chromosome 3,
             complete sequence
          Length = 82241

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   atctgtgtttatgtctttgc 167
             ||||||||||||||||||||
Sbjct: 22783 atctgtgtttatgtctttgc 22764
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>gb|AC124728.5| Mus musculus BAC clone RP23-470C22 from chromosome 6, complete sequence
          Length = 183845

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   cttccgttagtttggaaaaa 319
             ||||||||||||||||||||
Sbjct: 12581 cttccgttagtttggaaaaa 12562
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>gb|AC125155.4| Mus musculus BAC clone RP24-380D9 from chromosome 6, complete sequence
          Length = 173003

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 300    cttccgttagtttggaaaaa 319
              ||||||||||||||||||||
Sbjct: 118278 cttccgttagtttggaaaaa 118259
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>gb|AC127245.5| Mus musculus BAC clone RP24-422M4 from chromosome 6, complete sequence
          Length = 181475

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   aaaatatcatctgtgtttat 159
             ||||||||||||||||||||
Sbjct: 62494 aaaatatcatctgtgtttat 62475
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>gb|AC117243.3| Mus musculus BAC clone RP24-198D9 from 9, complete sequence
          Length = 168127

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 107    atgatttttctggaataaattttc 130
              ||||||||| ||||||||||||||
Sbjct: 141457 atgatttttttggaataaattttc 141480
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>ref|XM_722872.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY07162)
            partial mRNA
          Length = 4419

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 120  aataaattttcaaatgataaaaaa 143
            ||||||| ||||||||||||||||
Sbjct: 1624 aataaatattcaaatgataaaaaa 1647
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>ref|XM_720206.1| Plasmodium yoelii yoelii str. 17XNL erythrocyte membrane protein
            (PY04922) partial mRNA
          Length = 3078

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 124  aattttcaaatgataaaaaa 143
            ||||||||||||||||||||
Sbjct: 2642 aattttcaaatgataaaaaa 2661
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>gb|AC010908.3| Homo sapiens BAC clone CTD-3073A19 from 7, complete sequence
          Length = 127989

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   tttctggaataaattttcaa 132
             ||||||||||||||||||||
Sbjct: 57687 tttctggaataaattttcaa 57668
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>ref|XM_732224.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000327.00.0)
           partial mRNA
          Length = 882

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 124 aattttcaaatgataaaaaa 143
           ||||||||||||||||||||
Sbjct: 707 aattttcaaatgataaaaaa 726
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>ref|XM_666233.1| Plasmodium berghei strain ANKA hypothetical protein (PB402082.00.0)
           partial mRNA
          Length = 507

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 130 caaatgataaaaaatatcat 149
           ||||||||||||||||||||
Sbjct: 56  caaatgataaaaaatatcat 75
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>ref|XM_673337.1| Plasmodium berghei strain ANKA bromodomain protein (PB000190.02.0)
            partial mRNA
          Length = 2994

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 124  aattttcaaatgataaaaaa 143
            ||||||||||||||||||||
Sbjct: 2666 aattttcaaatgataaaaaa 2685
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>gb|AC137077.26| Medicago truncatula clone mth2-8g15, complete sequence
          Length = 138303

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 127  tttcaaatgataaaaaatat 146
            ||||||||||||||||||||
Sbjct: 9151 tttcaaatgataaaaaatat 9170
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>emb|Z84466.2|HS230G1 Human DNA sequence from clone RP1-230G1 on chromosome Xp11.3 Contains
             5'UTR of the ZNF41 gene for zinc finger protein 41, a
             novel gene (LOC203414), a chromosome 6 open reading frame
             68 pseudogene (LOC286402), the ARAF1 gene for v-raf murine
             sarcoma 3611 viral oncogene homolog 1, the 3' end of the
             SYN1 gene for synapsin I, the TIMP1 gene for tissue
             inhibitor of metalloproteinase 1 (erythroid potentiating
             activity, collagenase inhibitor) and five CpG islands,
             complete sequence
          Length = 125517

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 333   aagatggaagattctttctt 352
             ||||||||||||||||||||
Sbjct: 40286 aagatggaagattctttctt 40267
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>emb|AL606826.4| Human DNA sequence from clone RP11-154G15 on chromosome 13, complete
             sequence
          Length = 98677

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 112   ttttctggaataaattttcaaatg 135
             |||||||||||||||||| |||||
Sbjct: 85587 ttttctggaataaatttttaaatg 85564
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>gb|AC140119.3| Homo sapiens 3 BAC RP11-747D18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 80892

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   atgatttttctggaataaat 126
             ||||||||||||||||||||
Sbjct: 33983 atgatttttctggaataaat 33964
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>emb|AL591426.17| Mouse DNA sequence from clone RP23-345E8 on chromosome 11 Contains a
             novel gene, the Arht1 gene for ras homolog gene family
             member T1, the 5' end of the Rhbdl4 gene for rhomboid
             veinlet-like 4 (Drosophila), complete sequence
          Length = 153420

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 352   ttgcctccaaatgtgtactg 371
             ||||||||||||||||||||
Sbjct: 42523 ttgcctccaaatgtgtactg 42504
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>emb|CR859865.1| Pongo pygmaeus mRNA; cDNA DKFZp469J024 (from clone DKFZp469J024)
          Length = 4898

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 112  ttttctggaataaattttca 131
            ||||||||||||||||||||
Sbjct: 2129 ttttctggaataaattttca 2148
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>emb|BX470207.6| Zebrafish DNA sequence from clone CH211-116A8 in linkage group 7,
             complete sequence
          Length = 60832

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   aattttcaaatgataaaaaa 143
             ||||||||||||||||||||
Sbjct: 55236 aattttcaaatgataaaaaa 55217
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>gb|AC114287.2| Homo sapiens chromosome 5 clone CTD-2350L11, complete sequence
          Length = 88147

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 336  atggaagattctttctttgcctcc 359
            |||| |||||||||||||||||||
Sbjct: 9907 atggcagattctttctttgcctcc 9884
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>gb|AC009244.25| Homo sapiens chromosome 7 clone RP11-305M3, complete sequence
          Length = 190162

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   ttttctggaataaattttca 131
             ||||||||||||||||||||
Sbjct: 61096 ttttctggaataaattttca 61115
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>gb|AC012417.13| Homo sapiens chromosome 18, clone RP11-408H20, complete sequence
          Length = 181552

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   tactgatggaaatggtgaga 386
             ||||||||||||||||||||
Sbjct: 75286 tactgatggaaatggtgaga 75305
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     aattaacttcacaataaaat 68
              ||||||||||||||||||||
Sbjct: 422202 aattaacttcacaataaaat 422183
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>gb|AC091917.3| Homo sapiens chromosome 5 clone RP11-231G15, complete sequence
          Length = 73881

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 336   atggaagattctttctttgcctcc 359
             |||| |||||||||||||||||||
Sbjct: 71073 atggcagattctttctttgcctcc 71050
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>ref|NM_015328.1| Homo sapiens KIAA0828 protein (KIAA0828), mRNA
          Length = 5052

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 112  ttttctggaataaattttca 131
            ||||||||||||||||||||
Sbjct: 2261 ttttctggaataaattttca 2280
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>gb|AC132308.4| Mus musculus BAC clone RP24-292O13 from chromosome 5, complete sequence
          Length = 184560

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   caaatgatttttctggaata 123
             ||||||||||||||||||||
Sbjct: 72221 caaatgatttttctggaata 72240
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>gb|AC147892.2| Xenopus tropicalis clone CH216-35D21, complete sequence
          Length = 178580

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     caataaaatcaagaatgtaa 79
              ||||||||||||||||||||
Sbjct: 141816 caataaaatcaagaatgtaa 141797
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
              complete sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    aaattttcaaatgataaaaa 142
              ||||||||||||||||||||
Sbjct: 918716 aaattttcaaatgataaaaa 918735
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>dbj|AP005709.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0646B04
          Length = 178896

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   aaattttcaaatgataaaaa 142
             ||||||||||||||||||||
Sbjct: 82843 aaattttcaaatgataaaaa 82862
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>gb|CP000016.1| Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome
          Length = 791654

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    aatgatttttctggaataaa 125
              ||||||||||||||||||||
Sbjct: 202782 aatgatttttctggaataaa 202801
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>emb|X68896.1|CHCIRRNX4 Chloroplast Chlamydomonas indica rrnL gene, exon 4
          Length = 1014

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 121 ataaattttcaaatgataaaaaatatca 148
           ||||||||| |||| |||||||||||||
Sbjct: 122 ataaattttaaaattataaaaaatatca 95
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>gb|AF050157.1|MMHC135G15 Mus musculus major histocompatibility locus class II region: major
              histocompatibility protein class II alpha chain (IAalpha)
              and major histocompatibility protein class II beta chain
              (IEbeta) genes, complete cds; butyrophilin-like (NG9),
              butyrophilin-like (NG10), hypothetical protein (NG8), and
              butyrophilin-like (NG11) genes, partial cds; NG12
              pseudogene, partial sequence; and hypothetical
              butyrophilin-like protein (NG13) gene, partial cds
          Length = 245439

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 340    aagattctttctttgcctcc 359
              ||||||||||||||||||||
Sbjct: 232663 aagattctttctttgcctcc 232644
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>emb|BX000989.10| Mouse DNA sequence from clone RP23-33D17 on chromosome 4, complete
             sequence
          Length = 236166

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 500   ttcggaactgatagaaatgaggtg 523
             |||| |||||||||||||||||||
Sbjct: 56849 ttcgcaactgatagaaatgaggtg 56826
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>gb|AC164122.5| Mus musculus BAC clone RP24-409O23 from chromosome 6, complete sequence
          Length = 165015

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    aaaatatcatctgtgtttat 159
              ||||||||||||||||||||
Sbjct: 115364 aaaatatcatctgtgtttat 115345
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>gb|U01337.1|HSU01337 Human Ser/Thr protein kinase (A-RAF-1) gene, complete cds
          Length = 13509

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 333  aagatggaagattctttctt 352
            ||||||||||||||||||||
Sbjct: 3949 aagatggaagattctttctt 3968
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>emb|AL840626.7| Mouse DNA sequence from clone RP23-151M8 on chromosome 2, complete
              sequence
          Length = 181014

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    ttcaaatgatttttctggaa 121
              ||||||||||||||||||||
Sbjct: 102859 ttcaaatgatttttctggaa 102840
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>gb|L24038.1|HUMARAF1G Human murine sarcoma 3611 viral (v-raf) oncogene homolog 1 (ARAF1)
            gene, exons 1-16
          Length = 13509

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 333  aagatggaagattctttctt 352
            ||||||||||||||||||||
Sbjct: 3949 aagatggaagattctttctt 3968
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>dbj|AB020635.1| Homo sapiens mRNA for KIAA0828 protein, partial cds
          Length = 5025

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 112  ttttctggaataaattttca 131
            ||||||||||||||||||||
Sbjct: 2231 ttttctggaataaattttca 2250


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,734,917
Number of Sequences: 3902068
Number of extensions: 5734917
Number of successful extensions: 123479
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 123253
Number of HSP's gapped (non-prelim): 226
length of query: 524
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 501
effective length of database: 17,143,297,704
effective search space: 8588792149704
effective search space used: 8588792149704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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