ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah63l18 |
|---|---|
| Clone Library Name | barley_pub |
>PSY_ARATH (P37271) Phytoene synthase, chloroplast precursor (EC 2.5.1.-)| Length = 422 Score = 209 bits (532), Expect = 5e-54 Identities = 103/123 (83%), Positives = 112/123 (91%) Frame = -1 Query: 613 SVYNAALALGIANQLTNILRDVGEDSRRGRIYLPLDELAQAGLTEEDIFRGKVTDKWRRF 434 SVYNAALALGIANQLTNILRDVGED+RRGR+YLP DELAQAGL++EDIF GKVTDKWR F Sbjct: 278 SVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNF 337 Query: 433 MKGQIQRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKRAYVGK 254 MK Q++RAR+FFDEAEKGV L +ASRWPV ASL LYR+ILD IEANDYNNFTKRAYVGK Sbjct: 338 MKMQLKRARMFFDEAEKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGK 397 Query: 253 AKK 245 KK Sbjct: 398 VKK 400
>PSY2_LYCES (P37273) Phytoene synthase 2, chloroplast precursor (EC 2.5.1.-)| (Fragment) Length = 310 Score = 209 bits (531), Expect = 7e-54 Identities = 105/123 (85%), Positives = 111/123 (90%) Frame = -1 Query: 613 SVYNAALALGIANQLTNILRDVGEDSRRGRIYLPLDELAQAGLTEEDIFRGKVTDKWRRF 434 SVYNAALALGIANQLTNILRDVGED+RRGR+YLP DELAQAGL++EDIF GKVTDKWR F Sbjct: 163 SVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRIF 222 Query: 433 MKGQIQRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKRAYVGK 254 MK QIQRAR FFDEAEKGV L SASRWPVLASL LYR+ILD IEANDYNNFT+RAYV K Sbjct: 223 MKKQIQRARKFFDEAEKGVTELSSASRWPVLASLLLYRKILDEIEANDYNNFTRRAYVSK 282 Query: 253 AKK 245 KK Sbjct: 283 PKK 285
>PSY_CAPAN (P37272) Phytoene synthase, chloroplast precursor (EC 2.5.1.-)| Length = 419 Score = 207 bits (528), Expect = 1e-53 Identities = 104/123 (84%), Positives = 111/123 (90%) Frame = -1 Query: 613 SVYNAALALGIANQLTNILRDVGEDSRRGRIYLPLDELAQAGLTEEDIFRGKVTDKWRRF 434 SVYNAALALGIANQLTNILRDVGED+RRGR+YLP DELAQAGL++EDIF G+VTDKWR F Sbjct: 279 SVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGRVTDKWRIF 338 Query: 433 MKGQIQRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKRAYVGK 254 MK QIQRAR FFDEAEKGV L +ASRWPVLASL LYR+ILD IEANDYNNFTKRAYV K Sbjct: 339 MKKQIQRARKFFDEAEKGVTELSAASRWPVLASLLLYRRILDEIEANDYNNFTKRAYVSK 398 Query: 253 AKK 245 KK Sbjct: 399 PKK 401
>PSY_DAUCA (Q9SSU8) Phytoene synthase, chloroplast precursor (EC 2.5.1.-)| Length = 398 Score = 206 bits (523), Expect = 6e-53 Identities = 103/123 (83%), Positives = 112/123 (91%) Frame = -1 Query: 613 SVYNAALALGIANQLTNILRDVGEDSRRGRIYLPLDELAQAGLTEEDIFRGKVTDKWRRF 434 SVY+AALALGIANQLTNILRDVGED+RRGRIYLP +EL AG+T E IF+GKVTDKWR F Sbjct: 257 SVYSAALALGIANQLTNILRDVGEDARRGRIYLPQEELKLAGITPEYIFKGKVTDKWRSF 316 Query: 433 MKGQIQRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKRAYVGK 254 MKGQI+RAR+FFDEAEKGV L SASRWPV ASL LY+QILDAIEANDY+NFTKRAYVGK Sbjct: 317 MKGQIKRARMFFDEAEKGVAELSSASRWPVWASLLLYKQILDAIEANDYDNFTKRAYVGK 376 Query: 253 AKK 245 AKK Sbjct: 377 AKK 379
>PSY_NARPS (P53797) Phytoene synthase, chloroplast precursor (EC 2.5.1.-)| Length = 423 Score = 202 bits (515), Expect = 5e-52 Identities = 100/123 (81%), Positives = 109/123 (88%) Frame = -1 Query: 613 SVYNAALALGIANQLTNILRDVGEDSRRGRIYLPLDELAQAGLTEEDIFRGKVTDKWRRF 434 SVYNAALALGIANQLTNILRDVGED+RRGRIYLP DELA+AGL++ED+F GKVTDKWR F Sbjct: 275 SVYNAALALGIANQLTNILRDVGEDARRGRIYLPQDELAEAGLSDEDVFTGKVTDKWRSF 334 Query: 433 MKGQIQRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKRAYVGK 254 MK QI+RAR FF++AEKGV L ASRWPV ASL LYRQILD IEANDYNNFTKRAYV K Sbjct: 335 MKRQIKRARTFFEQAEKGVTELSQASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSK 394 Query: 253 AKK 245 K+ Sbjct: 395 VKR 397
>PSY_MAIZE (P49085) Phytoene synthase, chloroplast precursor (EC 2.5.1.-)| Length = 410 Score = 202 bits (514), Expect = 6e-52 Identities = 100/123 (81%), Positives = 111/123 (90%) Frame = -1 Query: 613 SVYNAALALGIANQLTNILRDVGEDSRRGRIYLPLDELAQAGLTEEDIFRGKVTDKWRRF 434 SVY+AALALGIANQLTNILRDVGED+RRGRIYLP DELAQAGL++EDIF+G VT++WR F Sbjct: 265 SVYSAALALGIANQLTNILRDVGEDARRGRIYLPQDELAQAGLSDEDIFKGVVTNRWRNF 324 Query: 433 MKGQIQRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKRAYVGK 254 MK QI+RAR+FF+EAE+GV L ASRWPV ASL LYRQILD IEANDYNNFTKRAYVGK Sbjct: 325 MKRQIKRARMFFEEAERGVNELSQASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVGK 384 Query: 253 AKK 245 KK Sbjct: 385 GKK 387
>PSY_CUCME (P49293) Phytoene synthase, chloroplast precursor (EC 2.5.1.-)| (MEL5) Length = 422 Score = 201 bits (512), Expect = 1e-51 Identities = 102/124 (82%), Positives = 111/124 (89%), Gaps = 1/124 (0%) Frame = -1 Query: 613 SVYNAALALGIANQLT-NILRDVGEDSRRGRIYLPLDELAQAGLTEEDIFRGKVTDKWRR 437 SVYNAALALGIANQ NILRDVGED+RRGRIYLP DELAQAGL++EDIF G+VTDKWR Sbjct: 283 SVYNAALALGIANQAPPNILRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRN 342 Query: 436 FMKGQIQRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKRAYVG 257 FMK QI+RAR+FFDEAEKGV+ L+ ASRWPV ASL LYRQILD IEANDY+NFTKRAYV Sbjct: 343 FMKNQIKRARMFFDEAEKGVLELNKASRWPVWASLLLYRQILDEIEANDYDNFTKRAYVS 402 Query: 256 KAKK 245 KAKK Sbjct: 403 KAKK 406
>PSY1_LYCES (P08196) Phytoene synthase 1, chloroplast precursor (EC 2.5.1.-)| (Fruit ripening-specific protein pTOM5) Length = 412 Score = 201 bits (511), Expect = 1e-51 Identities = 102/123 (82%), Positives = 110/123 (89%) Frame = -1 Query: 613 SVYNAALALGIANQLTNILRDVGEDSRRGRIYLPLDELAQAGLTEEDIFRGKVTDKWRRF 434 SVYNAALALGIANQLTNILRDVGED+RRGR+YLP DELAQAGL++EDIF G+VTDKWR F Sbjct: 267 SVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGRVTDKWRIF 326 Query: 433 MKGQIQRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKRAYVGK 254 MK QI RAR FFDEAEKGV L SASR+PV ASL LYR+ILD IEANDYNNFTKRAYV K Sbjct: 327 MKKQIHRARKFFDEAEKGVTELSSASRFPVWASLVLYRKILDEIEANDYNNFTKRAYVSK 386 Query: 253 AKK 245 +KK Sbjct: 387 SKK 389
>CRTB_SYNP7 (P37269) Phytoene synthase (EC 2.5.1.-)| Length = 308 Score = 152 bits (385), Expect = 6e-37 Identities = 74/118 (62%), Positives = 93/118 (78%) Frame = -1 Query: 598 ALALGIANQLTNILRDVGEDSRRGRIYLPLDELAQAGLTEEDIFRGKVTDKWRRFMKGQI 419 ALALGIANQLTNILRDVGED+RRGRIYLP +ELAQ +E+D+F G + D+WR FM+ Q+ Sbjct: 177 ALALGIANQLTNILRDVGEDARRGRIYLPQEELAQFNYSEQDLFNGVIDDRWRAFMQFQL 236 Query: 418 QRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKRAYVGKAKK 245 RAR +F++AE+G+ L +RWPV ASL LYR+ILD IE N+Y+ F KRAYV +K Sbjct: 237 DRARDYFEQAERGIRQLSHDARWPVWASLMLYREILDVIEQNNYDVFRKRAYVPTWRK 294
>CRTY_SPIPL (O07333) Phytoene synthase (EC 2.5.1.-)| Length = 309 Score = 146 bits (368), Expect = 5e-35 Identities = 74/118 (62%), Positives = 88/118 (74%) Frame = -1 Query: 598 ALALGIANQLTNILRDVGEDSRRGRIYLPLDELAQAGLTEEDIFRGKVTDKWRRFMKGQI 419 A+ALGIANQLTNILRDVGED+RRGRIYLPLD+LA TE D+ GKV ++WR M+ QI Sbjct: 178 AIALGIANQLTNILRDVGEDARRGRIYLPLDDLALFNYTEADLLNGKVDERWRELMRFQI 237 Query: 418 QRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKRAYVGKAKK 245 QRAR F+ AE+G+ L RWPV +L LYRQILD IE N+Y+ F +RAYV KK Sbjct: 238 QRARKFYTLAEEGIAALHPDIRWPVWTALMLYRQILDEIERNEYDVFNQRAYVPTWKK 295
>CRTB_SYNY3 (P37294) Phytoene synthase (EC 2.5.1.-)| Length = 337 Score = 140 bits (352), Expect = 4e-33 Identities = 67/118 (56%), Positives = 88/118 (74%) Frame = -1 Query: 598 ALALGIANQLTNILRDVGEDSRRGRIYLPLDELAQAGLTEEDIFRGKVTDKWRRFMKGQI 419 A+ALG+ANQLTNILRDVGED RGRIYLPL++L + +E+D+ G D+WR MK +I Sbjct: 206 AIALGVANQLTNILRDVGEDVERGRIYLPLEDLERFNYSEQDLLNGVNDDRWRSLMKFEI 265 Query: 418 QRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKRAYVGKAKK 245 RAR +F++AE+G+ L+ +RWPV +L LY+ ILD IEAN+YN F +RAYV KK Sbjct: 266 DRARHYFEDAERGIRALNRDARWPVWTALMLYKGILDVIEANNYNVFNRRAYVPTPKK 323
>CRTB_THET2 (P37270) Phytoene synthase (EC 2.5.1.-)| Length = 289 Score = 82.4 bits (202), Expect = 9e-16 Identities = 50/113 (44%), Positives = 66/113 (58%) Frame = -1 Query: 598 ALALGIANQLTNILRDVGEDSRRGRIYLPLDELAQAGLTEEDIFRGKVTDKWRRFMKGQI 419 A+ LG A QLTNILRDVGED R R+YLPLD L G+ ED+ G+VT +R M Sbjct: 152 AVKLGQAMQLTNILRDVGEDLERDRVYLPLDLLRAHGVEVEDLRAGRVTPGYRALMAHLE 211 Query: 418 QRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKRAYV 260 +AR + E G+ HL LA+L YR ILD + + Y+N +RA++ Sbjct: 212 GKARALYREGLAGLGHLKVGRAAIALAAL-QYRGILDKLRLSGYDNLGRRAHL 263
>CRTB_RHOS4 (P54905) Phytoene synthase (EC 2.5.1.-)| Length = 355 Score = 75.9 bits (185), Expect = 9e-14 Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 1/119 (0%) Frame = -1 Query: 598 ALALGIANQLTNILRDVGEDSRRGRIYLPLDELAQAGL-TEEDIFRGKVTDKWRRFMKGQ 422 A LG+A QLTNI RDVG D+R GRIYLP D + + GL EE + R V D+ R Sbjct: 160 ACDLGLAMQLTNIARDVGTDARSGRIYLPRDWMEEEGLPVEEFLARPVVDDRIRAVTHRL 219 Query: 421 IQRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKRAYVGKAKK 245 ++ A + +E GV L A R + A+ +Y I D I N Y++ T+RA+ + +K Sbjct: 220 LRAADRLYLRSEAGVCGLPLACRPGIYAARHIYAGIGDEIARNGYDSVTRRAFTTRRQK 278
>CRTB_STRGR (P54977) Phytoene synthase (EC 2.5.1.-)| Length = 342 Score = 67.8 bits (164), Expect = 2e-11 Identities = 47/123 (38%), Positives = 63/123 (51%), Gaps = 5/123 (4%) Frame = -1 Query: 598 ALALGIANQLTNILRDVGEDSRRGRIYLPLDELAQAGLTEEDIFR-----GKVTDKWRRF 434 A ALG+A QLTN LRDVGED RGR+YLP + LA G + D F G + Sbjct: 171 AAALGVAFQLTNFLRDVGEDLDRGRLYLPTELLAAHG-ADRDRFEWSRSTGMPDSRITDV 229 Query: 433 MKGQIQRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKRAYVGK 254 ++ R + A G+ L SR + + LY ILDAIEA+ Y +RA V + Sbjct: 230 LRAAAAHNRAVYRAALPGIAMLAPVSRPCIRTAFVLYSGILDAIEADGYAVLHRRAVVPR 289 Query: 253 AKK 245 ++ Sbjct: 290 RRR 292
>CRTB_RHOCA (P17056) Phytoene synthase (EC 2.5.1.-)| Length = 339 Score = 63.9 bits (154), Expect = 3e-10 Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 1/119 (0%) Frame = -1 Query: 598 ALALGIANQLTNILRDVGEDSRRGRIYLPLDELAQAGLTEEDIFRG-KVTDKWRRFMKGQ 422 A LG+A Q++NI RDVGED+R GR++LP D + + G+ + + T RR + Sbjct: 153 ACDLGLAMQMSNIARDVGEDARAGRLFLPTDWMVEEGIDPQAFLADPQPTKGIRRVTERL 212 Query: 421 IQRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKRAYVGKAKK 245 + RA + A GV L R ++A+ +Y I + Y+N T+RA+ K +K Sbjct: 213 LNRADRLYWRAATGVRLLPFDCRPGIMAAGKIYAAIGAEVAKAKYDNITRRAHTTKGRK 271
>CRTB_ENTAG (P22872) Phytoene synthase (EC 2.5.1.-)| Length = 309 Score = 57.4 bits (137), Expect = 3e-08 Identities = 36/122 (29%), Positives = 61/122 (50%) Frame = -1 Query: 610 VYNAALALGIANQLTNILRDVGEDSRRGRIYLPLDELAQAGLTEEDIFRGKVTDKWRRFM 431 V + A LG+A QLTNI RD+ +D+ R YLP + L AGLT E+ + R Sbjct: 157 VLDRACDLGLAFQLTNIARDIIDDAAIDRCYLPAEWLQDAGLTPENYAARENRAALARVA 216 Query: 430 KGQIQRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKRAYVGKA 251 + I A ++ ++ G+ L W + + +YR+I ++A + + +R + K Sbjct: 217 ERLIDAAEPYYISSQAGLHDLPPRCAWAIATARSVYREIGIKVKAAGGSAWDRRQHTSKG 276 Query: 250 KK 245 +K Sbjct: 277 EK 278
>CRTB_PARSN (P54975) Phytoene synthase (EC 2.5.1.-)| Length = 304 Score = 57.0 bits (136), Expect = 4e-08 Identities = 43/123 (34%), Positives = 60/123 (48%), Gaps = 1/123 (0%) Frame = -1 Query: 610 VYNAALALGIANQLTNILRDVGEDSRRGRIYLPLDELAQAGLTEEDIFRGKV-TDKWRRF 434 V + A LG+A QLTNI RDV +D+R GR YLP D L QAG + G V + + Sbjct: 153 VLDRACDLGLAFQLTNIARDVIDDARIGRCYLPGDWLDQAGARVD----GPVPSPELYTV 208 Query: 433 MKGQIQRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKRAYVGK 254 + + A L++ A G+ L W + A+L +YR I I + +R K Sbjct: 209 ILRLLDAAELYYASARVGLADLPPRCAWSIAAALRIYRAIGLRIRKGGPEAYRQRISTSK 268 Query: 253 AKK 245 A K Sbjct: 269 AAK 271
>CRTB_PANAN (P21683) Phytoene synthase (EC 2.5.1.-)| Length = 309 Score = 56.6 bits (135), Expect = 6e-08 Identities = 32/95 (33%), Positives = 48/95 (50%) Frame = -1 Query: 598 ALALGIANQLTNILRDVGEDSRRGRIYLPLDELAQAGLTEEDIFRGKVTDKWRRFMKGQI 419 A LG+A QLTNI RD+ +D+ GR YLP L GL +E+ + R + + Sbjct: 161 ACDLGLAFQLTNIARDIVDDAHAGRCYLPASWLEHEGLNKENYAAPENRQALSRIARRLV 220 Query: 418 QRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQI 314 Q A ++ A G+ L S W + + +YR+I Sbjct: 221 QEAEPYYLSATAGLAGLPLRSAWAIATAKQVYRKI 255
>CRTB_MYCTU (P65860) Probable phytoene synthase (EC 2.5.1.-)| Length = 302 Score = 53.1 bits (126), Expect = 6e-07 Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 3/118 (2%) Frame = -1 Query: 589 LGIANQLTNILRDVGEDSRRGRIYLPLDELAQAGLTEEDIFRGKVTD---KWRRFMKGQI 419 LGIA Q TNILRDV ED GRIYLP DEL + G+ G + D + ++ Sbjct: 154 LGIALQQTNILRDVREDFLNGRIYLPRDELDRLGVRLRLDDTGALDDPDGRLAALLRFSA 213 Query: 418 QRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKRAYVGKAKK 245 RA ++ + + HLD S A +YR+ L I A+ + +R + KK Sbjct: 214 DRAADWYSLGLRLIPHLDRRSAACCAAMSGIYRRQLALIRASPAVVYDRRISLSGLKK 271
>CRTB_MYCBO (P65861) Probable phytoene synthase (EC 2.5.1.-)| Length = 302 Score = 53.1 bits (126), Expect = 6e-07 Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 3/118 (2%) Frame = -1 Query: 589 LGIANQLTNILRDVGEDSRRGRIYLPLDELAQAGLTEEDIFRGKVTD---KWRRFMKGQI 419 LGIA Q TNILRDV ED GRIYLP DEL + G+ G + D + ++ Sbjct: 154 LGIALQQTNILRDVREDFLNGRIYLPRDELDRLGVRLRLDDTGALDDPDGRLAALLRFSA 213 Query: 418 QRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKRAYVGKAKK 245 RA ++ + + HLD S A +YR+ L I A+ + +R + KK Sbjct: 214 DRAADWYSLGLRLIPHLDRRSAACCAAMSGIYRRQLALIRASPAVVYDRRISLSGLKK 271
>Y4AC_RHISN (P55350) Putative phytoene synthase (EC 2.5.1.-)| Length = 279 Score = 52.8 bits (125), Expect = 8e-07 Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 11/119 (9%) Frame = -1 Query: 589 LGIANQLTNILRDVGEDSRRGRIYLPLDELAQAGLTEEDIFRGKVTDKWRRFMKGQIQRA 410 LG A QLTNILRD+ ED+ GR+Y+P + L AG+T D + + QRA Sbjct: 154 LGRALQLTNILRDIDEDAGLGRLYIPRESLDHAGITSSDPHKVIADKALPKACAPLAQRA 213 Query: 409 RLFFDEAEKGVMHLDSAS--RWPVLASLWLYRQILDAI---------EANDYNNFTKRA 266 + F E+++ +M+ + R P + S YR ILD + E N TKRA Sbjct: 214 MMHFAESDE-IMNCNPRRIVRAPTIMSK-CYRAILDLLLIRGFAAPREPVRVTNLTKRA 270
>PSY_NEUCR (P37295) Phytoene synthase (EC 2.5.1.-) (Albino-2 protein)| Length = 602 Score = 47.0 bits (110), Expect = 4e-05 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 4/100 (4%) Frame = -1 Query: 601 AALALGIANQLTNILRDVGEDSRRGRIYLPLDELAQAGLTEEDIFRG----KVTDKWRRF 434 AA +GIA Q NI RD+ D+R GR+YLP L + GLT + + +V ++ RR Sbjct: 468 AACRMGIALQYVNIARDIVVDARIGRVYLPTTWLKKEGLTHKMVLENPEGPEVIERMRRR 527 Query: 433 MKGQIQRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQI 314 + ++ A + A + + S +R P++ ++ Y I Sbjct: 528 L---LENAFELYGGARPEMQRIPSEARGPMIGAVENYMAI 564
>LCPS_RHIRA (Q9UUQ6) CarRP protein [Includes: Lycopene cyclase (EC 1.-.-.-);| Phytoene synthase (EC 2.5.1.-)] Length = 614 Score = 39.7 bits (91), Expect = 0.007 Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 3/125 (2%) Frame = -1 Query: 610 VYNAALALGIANQLTNILRDVGEDSRR-GRIYLPLDELA--QAGLTEEDIFRGKVTDKWR 440 + A +G+ Q TNI RD+ DS GR YLP D L + L + + R ++ Sbjct: 456 IIQRAREMGLVLQYTNIARDIVTDSEELGRCYLPQDWLTEKEVALIQGGLAREIGEERLL 515 Query: 439 RFMKGQIQRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQILDAIEANDYNNFTKRAYV 260 I +A A KG+ L S + V A+ +Y I +++ + ++ RA+V Sbjct: 516 SLSHRLIYQADELMVVANKGIDKLPSHCQGGVRAACNVYASIGTKLKSYKH-HYPSRAHV 574 Query: 259 GKAKK 245 G +K+ Sbjct: 575 GNSKR 579
>CRUP_STRCO (Q9ACU1) Bifunctional crtB/uppS protein [Includes: Phytoene| synthase (EC 2.5.1.-); Undecaprenyl pyrophosphate synthetase 3 (EC 2.5.1.31) (UPP synthetase 3) (Di-trans,poly-cis-decaprenylcistransferase 3) (Undecaprenyl diphosphate synthase 3) (U Length = 564 Score = 39.7 bits (91), Expect = 0.007 Identities = 21/66 (31%), Positives = 34/66 (51%) Frame = -1 Query: 589 LGIANQLTNILRDVGEDSRRGRIYLPLDELAQAGLTEEDIFRGKVTDKWRRFMKGQIQRA 410 LG A Q+ ++ D+ +D GR YLP +L GL +D+ RG+ + F+ Q+ Sbjct: 191 LGEACQVADLFEDLPDDLAAGRCYLPRQDLRGLGLDVDDLRRGEREEALNAFVDAQLAHW 250 Query: 409 RLFFDE 392 R +E Sbjct: 251 RGLLEE 256
>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 (Brain cyclic nucleotide gated channel 2) (BCNG-2) Length = 889 Score = 34.7 bits (78), Expect = 0.23 Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 7/73 (9%) Frame = +1 Query: 199 MVKEPPSHMRPATTGTSSPCPHTHAW*SCCSRSPRWRPGSACTATAMPGPAI-------C 357 +V+ PP PA P P + R+PR P A + GPA+ Sbjct: 757 LVRRPPPGPAPAAASPGPPPPASPPGAPASPRAPRTSPYGGLPAAPLAGPALPARRLSRA 816 Query: 358 SQSLDA*RPSRPH 396 S+ L A +PS PH Sbjct: 817 SRPLSASQPSLPH 829
>INVS_MOUSE (O89019) Inversin (Inversion of embryo turning protein)| (Nephrocystin-2) Length = 1062 Score = 32.3 bits (72), Expect = 1.1 Identities = 40/135 (29%), Positives = 56/135 (41%), Gaps = 2/135 (1%) Frame = -3 Query: 584 HCQ--PADKHPPRCRRRLEEGENIPSTGRAGTSGSDRRGHIQRESDG*MEEVHEGPNSAR 411 HC+ A HP R EG N S+ GTS ++R + E++G EGP+SAR Sbjct: 698 HCRGPSACVHP-----RSWEGGN--SSKNQGTSSVEKR---RGETNGKHRRCEEGPSSAR 747 Query: 410 QALL**GREGRHASRLCEQMAGPGIAVAVQADPGRHRGERLQQLHQACVCGQGEEVPVVA 231 Q L GR A + + + P +A A Q D R +R + + Q + Sbjct: 748 QPLC--TGSGRPAEK--GEDSSPAVASASQQDHPRKPNKRQDRAARPRGASQKRRTHQLR 803 Query: 230 GRICEGGSFTISKAK 186 R GS AK Sbjct: 804 DRCSPAGSSRPGSAK 818
>VE2_COPV (Q89420) Regulatory protein E2| Length = 385 Score = 30.4 bits (67), Expect = 4.2 Identities = 21/67 (31%), Positives = 28/67 (41%) Frame = -3 Query: 539 LEEGENIPSTGRAGTSGSDRRGHIQRESDG*MEEVHEGPNSARQALL**GREGRHASRLC 360 L + IP+T AGTSG + GH S +GP+ R GR +SR Sbjct: 188 LNQPTTIPTTSAAGTSGPELPGHSASGSGACSLTPRKGPSR---------RPGRRSSRFP 238 Query: 359 EQMAGPG 339 + G G Sbjct: 239 RRSGGRG 245
>DPOL_HHV6U (P28857) DNA polymerase (EC 2.7.7.7)| Length = 1012 Score = 29.6 bits (65), Expect = 7.2 Identities = 17/38 (44%), Positives = 23/38 (60%) Frame = -1 Query: 517 LPLDELAQAGLTEEDIFRGKVTDKWRRFMKGQIQRARL 404 L LDE AGL+E DI K+ D+ RF+K I+ + L Sbjct: 591 LVLDERQIAGLSESDILTVKLGDETHRFVKPCIRESVL 628
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 29.3 bits (64), Expect = 9.5 Identities = 17/53 (32%), Positives = 21/53 (39%) Frame = -3 Query: 608 VQCRTGPWHCQPADKHPPRCRRRLEEGENIPSTGRAGTSGSDRRGHIQRESDG 450 V R P + + A K PPR + P R G SDRRG + G Sbjct: 121 VDHRPSPPYQRAARKDPPRRSEPSKPANRAPGNDRGGRGPSDRRGDARSGGGG 173
>HIC2_HUMAN (Q96JB3) Hypermethylated in cancer 2 protein (Hic-2) (Hic-3)| (HIC1-related gene on chromosome 22) (Zinc finger and BTB domain-containing protein 30) Length = 615 Score = 29.3 bits (64), Expect = 9.5 Identities = 23/69 (33%), Positives = 32/69 (46%) Frame = -3 Query: 551 CRRRLEEGENIPSTGRAGTSGSDRRGHIQRESDG*MEEVHEGPNSARQALL**GREGRHA 372 CRR+L+ +GRAG++G R QR S + + AR L GR+G HA Sbjct: 135 CRRKLKRAGKPFGSGRAGSTGMGRPPRSQRLSTASVIQ-------ARYQGLVDGRKGAHA 187 Query: 371 SRLCEQMAG 345 + Q G Sbjct: 188 PQELPQAKG 196
>SMOO_HUMAN (P53814) Smoothelin| Length = 917 Score = 29.3 bits (64), Expect = 9.5 Identities = 14/40 (35%), Positives = 18/40 (45%) Frame = -3 Query: 569 DKHPPRCRRRLEEGENIPSTGRAGTSGSDRRGHIQRESDG 450 D+ RRL+E P GR T+ H QR +DG Sbjct: 621 DQRDKERERRLQEARGRPGEGRGNTATETTTRHSQRAADG 660
>CHEB_GEOKA (Q5L0L0) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 349 Score = 29.3 bits (64), Expect = 9.5 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Frame = +2 Query: 392 LIKEEPGALNLALHEPPPFIRHFPSEYVLF---CQTRLCQLV 508 +++EE GAL E PP H P+ VLF RLC+ + Sbjct: 240 IVREEGGALKARFDESPPRAGHRPAVDVLFESLAAIRLCRKI 281
>MECA2_BACCR (Q81FS9) Adapter protein mecA 2| Length = 202 Score = 29.3 bits (64), Expect = 9.5 Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 2/35 (5%) Frame = -1 Query: 526 RIYLPLDELAQAGLTEEDIFRG--KVTDKWRRFMK 428 +I+L D+L++ GLT+ED++R KV +R M+ Sbjct: 12 KIFLTFDDLSERGLTKEDLWRNAPKVQQLFRDMMQ 46
>MECA2_BACAN (Q81SY4) Adapter protein mecA 2| Length = 202 Score = 29.3 bits (64), Expect = 9.5 Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 2/35 (5%) Frame = -1 Query: 526 RIYLPLDELAQAGLTEEDIFRG--KVTDKWRRFMK 428 +I+L D+L++ GLT+ED++R KV +R M+ Sbjct: 12 KIFLTFDDLSERGLTKEDLWRNAPKVQQLFRDMMQ 46
>PHEA_SYNY1 (P20778) C-phycoerythrin alpha chain| Length = 164 Score = 29.3 bits (64), Expect = 9.5 Identities = 17/52 (32%), Positives = 29/52 (55%) Frame = -1 Query: 433 MKGQIQRARLFFDEAEKGVMHLDSASRWPVLASLWLYRQILDAIEANDYNNF 278 ++G IQRA + AEK +LD+ ++ A++ Y + +A EAN + F Sbjct: 27 VQGSIQRAAARLEAAEKLAANLDAVAKEAYDAAIKKYSYLNNAGEANSTDTF 78 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,645,469 Number of Sequences: 219361 Number of extensions: 2080607 Number of successful extensions: 5875 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 5628 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5866 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
