>ref|NM_192819.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2100

 Score =  167 bits (84), Expect = 5e-38
 Identities = 132/148 (89%)
 Strand = Plus / Minus

                                                                        
Query: 414  taagttagcgcaaaggcttcttcttggaagggaagctgtggttcttcttggaagggatga 473
            ||||||||||||||  | ||||||||||| | |||||| || ||||||||| ||||||||
Sbjct: 2099 taagttagcgcaaaatcctcttcttggaaagaaagctgcggctcttcttggtagggatga 2040

                                                                        
Query: 474  actactttgttgatctcatctgccgtgagagtttcacgctccagcagagcattcgctaaa 533
            || |||||||| ||||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 2039 accactttgtttatctcatctgcggtgagtgtttcacgctccagcagggcgtttgctaaa 1980

                                        
Query: 534  gcatgtaattgcttctcatgcttcttca 561
            || |||||||||||||||||||||||||
Sbjct: 1979 gcgtgtaattgcttctcatgcttcttca 1952

>dbj|AK060394.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-A12, full
           insert sequence
          Length = 1284

 Score =  167 bits (84), Expect = 5e-38
 Identities = 132/148 (89%)
 Strand = Plus / Minus

                                                                       
Query: 414 taagttagcgcaaaggcttcttcttggaagggaagctgtggttcttcttggaagggatga 473
           ||||||||||||||  | ||||||||||| | |||||| || ||||||||| ||||||||
Sbjct: 890 taagttagcgcaaaatcctcttcttggaaagaaagctgcggctcttcttggtagggatga 831

                                                                       
Query: 474 actactttgttgatctcatctgccgtgagagtttcacgctccagcagagcattcgctaaa 533
           || |||||||| ||||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 830 accactttgtttatctcatctgcggtgagtgtttcacgctccagcagggcgtttgctaaa 771

                                       
Query: 534 gcatgtaattgcttctcatgcttcttca 561
           || |||||||||||||||||||||||||
Sbjct: 770 gcgtgtaattgcttctcatgcttcttca 743

>dbj|AK068431.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154E14, full
           insert sequence
          Length = 1443

 Score =  163 bits (82), Expect = 8e-37
 Identities = 130/146 (89%)
 Strand = Plus / Minus

                                                                       
Query: 416 agttagcgcaaaggcttcttcttggaagggaagctgtggttcttcttggaagggatgaac 475
           ||||||||||||  | ||||||||||| | |||||| || ||||||||| ||||||||||
Sbjct: 941 agttagcgcaaaatcctcttcttggaaagaaagctgcggctcttcttggtagggatgaac 882

                                                                       
Query: 476 tactttgttgatctcatctgccgtgagagtttcacgctccagcagagcattcgctaaagc 535
            |||||||| ||||||||||| ||||| ||||||||||||||||| || || ||||||||
Sbjct: 881 cactttgtttatctcatctgcggtgagtgtttcacgctccagcagggcgtttgctaaagc 822

                                     
Query: 536 atgtaattgcttctcatgcttcttca 561
            |||||||||||||||||||||||||
Sbjct: 821 gtgtaattgcttctcatgcttcttca 796

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  155 bits (78), Expect = 2e-34
 Identities = 126/142 (88%)
 Strand = Plus / Plus

                                                                            
Query: 414      taagttagcgcaaaggcttcttcttggaagggaagctgtggttcttcttggaagggatga 473
                ||||||||||||||  | ||||||||||| | |||||| || ||||||||| ||||||||
Sbjct: 24612713 taagttagcgcaaaatcctcttcttggaaagaaagctgcggctcttcttggtagggatga 24612772

                                                                            
Query: 474      actactttgttgatctcatctgccgtgagagtttcacgctccagcagagcattcgctaaa 533
                || |||||||| ||||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 24612773 accactttgtttatctcatctgcggtgagtgtttcacgctccagcagggcgtttgctaaa 24612832

                                      
Query: 534      gcatgtaattgcttctcatgct 555
                || |||||||||||||||||||
Sbjct: 24612833 gcgtgtaattgcttctcatgct 24612854

>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1040D09
          Length = 148102

 Score =  155 bits (78), Expect = 2e-34
 Identities = 126/142 (88%)
 Strand = Plus / Plus

                                                                         
Query: 414   taagttagcgcaaaggcttcttcttggaagggaagctgtggttcttcttggaagggatga 473
             ||||||||||||||  | ||||||||||| | |||||| || ||||||||| ||||||||
Sbjct: 38676 taagttagcgcaaaatcctcttcttggaaagaaagctgcggctcttcttggtagggatga 38735

                                                                         
Query: 474   actactttgttgatctcatctgccgtgagagtttcacgctccagcagagcattcgctaaa 533
             || |||||||| ||||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 38736 accactttgtttatctcatctgcggtgagtgtttcacgctccagcagggcgtttgctaaa 38795

                                   
Query: 534   gcatgtaattgcttctcatgct 555
             || |||||||||||||||||||
Sbjct: 38796 gcgtgtaattgcttctcatgct 38817

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 85      ctagcattcaaaatatgcaatg 106
               ||||||||||||||||||||||
Sbjct: 3523740 ctagcattcaaaatatgcaatg 3523719



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 64       gaattgaaaagaagaaataat 84
                |||||||||||||||||||||
Sbjct: 34222157 gaattgaaaagaagaaataat 34222177

>dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0023I17
          Length = 141852

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 85    ctagcattcaaaatatgcaatg 106
             ||||||||||||||||||||||
Sbjct: 68535 ctagcattcaaaatatgcaatg 68514

>dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBa0085K21
          Length = 180714

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 85   ctagcattcaaaatatgcaatg 106
            ||||||||||||||||||||||
Sbjct: 5030 ctagcattcaaaatatgcaatg 5009

>emb|AL451046.8| Human DNA sequence from clone RP11-174C7 on chromosome 6 Contains a
             ubiquitin-like 1 (sentrin) (UBL1) pseudogene, a novel
             pseudogene, a pyridoxal (pyridoxine, vitamin B6) kinase
             (PDXK) pseudogene and a novel gene, complete sequence
          Length = 105692

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 63    agaattgaaaagaagaaataa 83
             |||||||||||||||||||||
Sbjct: 40999 agaattgaaaagaagaaataa 40979

>gb|AC144531.2| Homo sapiens 3 BAC RP11-945M2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 127580

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 63     agaattgaaaagaagaaataa 83
              |||||||||||||||||||||
Sbjct: 112540 agaattgaaaagaagaaataa 112560

>gb|AC163652.3| Mus musculus BAC clone RP24-315D17 from chromosome 17, complete
             sequence
          Length = 171992

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 545   cttctcatgcttcttcagcaa 565
             |||||||||||||||||||||
Sbjct: 23328 cttctcatgcttcttcagcaa 23348

>gb|AC124316.32| Mus musculus chromosome 17, clone RP24-222O13, complete sequence
          Length = 223552

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 545 cttctcatgcttcttcagcaa 565
           |||||||||||||||||||||
Sbjct: 683 cttctcatgcttcttcagcaa 663

>dbj|AP007227.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0032L17
          Length = 165808

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 64     gaattgaaaagaagaaataat 84
              |||||||||||||||||||||
Sbjct: 149671 gaattgaaaagaagaaataat 149691

>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0689B12
          Length = 154745

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 64    gaattgaaaagaagaaataat 84
             |||||||||||||||||||||
Sbjct: 57430 gaattgaaaagaagaaataat 57450

>dbj|AK107538.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-H06, full
            insert sequence
          Length = 2050

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 64   gaattgaaaagaagaaataat 84
            |||||||||||||||||||||
Sbjct: 2010 gaattgaaaagaagaaataat 2030

>gb|U10250.1|ASU10250 Aeromonas sobria AER 14 cephalosporinase gene, complete cds
          Length = 1499

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 140 tatgatgcacttctcaactca 160
           |||||||||||||||||||||
Sbjct: 144 tatgatgcacttctcaactca 164

>ref|NM_192579.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1278

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 547  tctcatgcttcttcagcaaa 566
            ||||||||||||||||||||
Sbjct: 1138 tctcatgcttcttcagcaaa 1119

>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence
          Length = 1590432

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 257    catctttcaatttcctgcat 276
              ||||||||||||||||||||
Sbjct: 174353 catctttcaatttcctgcat 174334

>gb|AC103580.4| Trypanosoma brucei chromosome 4 clone RPCI93-5E12, complete sequence
          Length = 174832

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 257    catctttcaatttcctgcat 276
              ||||||||||||||||||||
Sbjct: 157542 catctttcaatttcctgcat 157561

>gb|AF525764.1| Aegilops tauschii subsp. strangulata SBE I pseudogene, partial
             sequence; SBE I pseudogene, complete sequence; and starch
             branching enzyme I (SBE I) gene, complete cds
          Length = 25187

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    ttcaaaatatgcaatgtcgc 110
             ||||||||||||||||||||
Sbjct: 17937 ttcaaaatatgcaatgtcgc 17918

>ref|XM_892687.2| PREDICTED: Mus musculus similar to zinc finger protein 161
           (LOC331380), mRNA
          Length = 423

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 544 gcttctcatgcttcttcagc 563
           ||||||||||||||||||||
Sbjct: 241 gcttctcatgcttcttcagc 222

>emb|AJ786652.1| Pisum sativum mRNA for Ftsh-like protease (ftsh11 gene)
          Length = 2769

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 535  catgtaattgcttctcatgcttcttcag 562
            ||||||||  ||||||||||||||||||
Sbjct: 2322 catgtaatgccttctcatgcttcttcag 2295

>ref|XM_821730.1| Trypanosoma brucei TREU927 clone RPCI93-5E12 hypothetical protein
            (Tb927.4.610) partial mRNA
          Length = 1416

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 257  catctttcaatttcctgcat 276
            ||||||||||||||||||||
Sbjct: 1084 catctttcaatttcctgcat 1103

>gb|AC139045.7| Mus musculus chromosome 7, clone RP23-466H15, complete sequence
          Length = 186309

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 441   aagggaagctgtggttcttc 460
             ||||||||||||||||||||
Sbjct: 84338 aagggaagctgtggttcttc 84357

>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced
          Length = 1285452

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 551    atgcttcttcagcaaatgtgtgac 574
              |||||||||||||| |||||||||
Sbjct: 908255 atgcttcttcagcatatgtgtgac 908232

>gb|AC023948.13| Homo sapiens chromosome 8, clone RP11-669B22, complete sequence
          Length = 195981

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 551    atgcttcttcagcaaatgtgtgac 574
              |||||||||||||| |||||||||
Sbjct: 133819 atgcttcttcagcatatgtgtgac 133796

>gb|AC104301.2| Homo sapiens chromosome 3 clone RP11-150N22, complete sequence
          Length = 189610

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    aattgaaaagaagaaataat 84
             ||||||||||||||||||||
Sbjct: 69850 aattgaaaagaagaaataat 69869

>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene,
              alternatively spliced, complete cds
          Length = 1421559

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 551    atgcttcttcagcaaatgtgtgac 574
              |||||||||||||| |||||||||
Sbjct: 908255 atgcttcttcagcatatgtgtgac 908232

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 381      ctaccaccttgatgcaacaaaagg 404
                ||||||||||| ||||||||||||
Sbjct: 19275621 ctaccaccttggtgcaacaaaagg 19275598

>dbj|AK069057.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004J21, full
            insert sequence
          Length = 2702

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 547  tctcatgcttcttcagcaaa 566
            ||||||||||||||||||||
Sbjct: 2253 tctcatgcttcttcagcaaa 2234

>dbj|AK059215.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C07, full
           insert sequence
          Length = 1201

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 547 tctcatgcttcttcagcaaa 566
           ||||||||||||||||||||
Sbjct: 694 tctcatgcttcttcagcaaa 675

>dbj|AP003815.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1163_G04
          Length = 106253

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 381   ctaccaccttgatgcaacaaaagg 404
             ||||||||||| ||||||||||||
Sbjct: 51847 ctaccaccttggtgcaacaaaagg 51824

>gb|AC120378.7| Mus musculus chromosome 7, clone RP24-263N3, complete sequence
          Length = 143396

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 441    aagggaagctgtggttcttc 460
              ||||||||||||||||||||
Sbjct: 111077 aagggaagctgtggttcttc 111096

>gb|AC092202.28| Mus musculus strain C57BL/6J chromosome 3 clone rp23-407b16, complete
              sequence
          Length = 196249

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 61     acagaattgaaaagaagaaataat 84
              |||||||||||||||||| |||||
Sbjct: 185130 acagaattgaaaagaagacataat 185107

>gb|AC140190.3| Mus musculus BAC clone RP24-372P19 from 3, complete sequence
          Length = 205702

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 61     acagaattgaaaagaagaaataat 84
              |||||||||||||||||| |||||
Sbjct: 152063 acagaattgaaaagaagacataat 152086

>emb|AL731692.8| Mouse DNA sequence from clone RP23-245M18 on chromosome X, complete
              sequence
          Length = 169309

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 544    gcttctcatgcttcttcagc 563
              ||||||||||||||||||||
Sbjct: 161091 gcttctcatgcttcttcagc 161072

>emb|AL806531.12| Mouse DNA sequence from clone RP23-188K22 on chromosome X, complete
             sequence
          Length = 70515

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 544   gcttctcatgcttcttcagc 563
             ||||||||||||||||||||
Sbjct: 67728 gcttctcatgcttcttcagc 67747



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 544   gcttctcatgcttcttcagc 563
             ||||||||||||||||||||
Sbjct: 59059 gcttctcatgcttcttcagc 59078



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 544  gcttctcatgcttcttcagc 563
            ||||||||||||||||||||
Sbjct: 3974 gcttctcatgcttcttcagc 3955


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,544,270
Number of Sequences: 3902068
Number of extensions: 5544270
Number of successful extensions: 107585
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107374
Number of HSP's gapped (non-prelim): 211
length of query: 589
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 566
effective length of database: 17,143,297,704
effective search space: 9703106500464
effective search space used: 9703106500464
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)