ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63l14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478776.1| Oryza sativa (japonica cultivar-group), mRNA 100 7e-18
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 100 7e-18
3dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic D... 100 7e-18
4dbj|AK099771.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 7e-18
5dbj|AK067380.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
6emb|BX323810.8| Zebrafish DNA sequence from clone CH211-153K16 i... 44 0.38
7gb|AC119236.8| Mus musculus chromosome 19, clone RP24-213B12, co... 42 1.5
8gb|AC091939.3| Homo sapiens chromosome 5 clone RP11-32D16, compl... 42 1.5
9gb|AC010414.8| Homo sapiens chromosome 5 clone CTD-2169P11, comp... 42 1.5
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
11dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
12gb|AC151978.3| Mus musculus BAC clone RP24-545C19 from 19, compl... 42 1.5
13gb|AC161047.2| Mus musculus BAC clone RP24-189I12 from chromosom... 42 1.5
14emb|AL603804.18| Mouse DNA sequence from clone RP23-470C16 on ch... 42 1.5
15emb|AL928832.7| Mouse DNA sequence from clone RP23-261N18 on chr... 42 1.5
16gb|AC118700.10| Mus musculus chromosome 3, clone RP23-24O21, com... 40 5.9
17ref|NM_015659.1| Homo sapiens ribosomal L1 domain containing 1 (... 40 5.9
18gb|AC121510.10| Mus musculus chromosome 19, clone RP24-371N19, c... 40 5.9
19gb|AC148990.6| Mus musculus BAC clone RP24-466N11 from chromosom... 40 5.9
20gb|AF078157.1| Caenorhabditis elegans cosmid F25E5, complete seq... 40 5.9
21gb|AC167134.5| Mus musculus chromosome 1, clone RP23-59E7, compl... 40 5.9
22gb|AC120397.7| Mus musculus chromosome 18, clone RP24-332E21, co... 40 5.9
23gb|AC126929.3| Mus musculus BAC clone RP24-465A20 from chromosom... 40 5.9
24gb|AC073248.5| Homo sapiens BAC clone CTD-2009F14 from 7, comple... 40 5.9
25emb|AL356215.11| Human DNA sequence from clone RP4-607I7 on chro... 40 5.9
26gb|AC114699.5| Rattus norvegicus 19 BAC CH230-235A3 (Children's ... 40 5.9
27gb|AC162299.6| Mus musculus chromosome 1, clone RP24-320H7, comp... 40 5.9
28gb|AC129507.9| Homo sapiens chromosome 17, clone RP11-1260E13, c... 40 5.9
29gb|AC079848.16| Homo sapiens 3 BAC RP11-124N2 (Roswell Park Canc... 40 5.9
30gb|AC093572.18| Pan troglodytes clone rp43-25g23, complete sequence 40 5.9
31gb|AC021035.8| Homo sapiens chromosome 10 clone RP11-381K7, comp... 40 5.9
32gb|AC096755.2| Homo sapiens BAC clone RP11-519M16 from 4, comple... 40 5.9
33gb|AC079857.5| Homo sapiens BAC clone RP11-589E1 from 4, complet... 40 5.9
34gb|AC010260.7| Homo sapiens chromosome 5 clone CTC-458I2, comple... 40 5.9
35gb|AC137898.6| Homo sapiens chromosome 17, clone RP11-101O21, co... 40 5.9
36gb|AC012636.5|AC012636 Homo sapiens chromosome 5 clone CTD-2201I... 40 5.9
37ref|NM_072515.1| Caenorhabditis elegans F25E5.10 (F25E5.10) mRNA... 40 5.9
38gb|AC093892.3| Homo sapiens BAC clone RP11-702L18 from 2, comple... 40 5.9
39gb|AC102947.13| Homo sapiens chromosome 17, clone CTD-2179N1, co... 40 5.9
40gb|AC107675.13| Mus musculus chromosome 1, clone RP24-471N7, com... 40 5.9
41gb|AC007963.7|AC007963 Homo sapiens chromosome 17, clone CTD-201... 40 5.9
42gb|AC010888.12| Homo sapiens BAC clone RP11-418N16 from 2, compl... 40 5.9
43gb|AC079866.14| Homo sapiens 12 BAC RP11-274J7 (Roswell Park Can... 40 5.9
44gb|AC156599.2| Laccaria bicolor clone JGIAHZW-3X, complete sequence 40 5.9
45gb|AY154473.1| Homo sapiens cellular senescence inhibited gene p... 40 5.9
46dbj|BS000103.1| Pan troglodytes chromosome 22 clone:PTB-031J04, ... 40 5.9
47dbj|AP001693.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 5.9
48gb|AC108848.12| Mus musculus chromosome 5, clone RP23-300K5, com... 40 5.9
49gb|AC148120.4| Saimiri boliviensis boliviensis clone CH254-165N1... 40 5.9
50dbj|AP000354.1| Homo sapiens genomic DNA, chromosome 22q11.2, cl... 40 5.9
51dbj|AP000220.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL... 40 5.9
52dbj|AP000136.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL... 40 5.9
53dbj|AP000084.1| Homo sapiens genomic DNA of 21q22.1, APP related... 40 5.9 
>ref|XM_478776.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3961

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 62/66 (93%)
 Strand = Plus / Minus

                                                                        
Query: 122  ttctatgcacctccagctttccaccatgggaggataacctactacacacaagcatcactc 181
            ||||||||||||||||||||||| |||| ||||||||||||||||||| ||| |||||||
Sbjct: 3596 ttctatgcacctccagctttccatcatgagaggataacctactacacaaaagtatcactc 3537

                  
Query: 182  ccatca 187
            ||||||
Sbjct: 3536 ccatca 3531



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 396  ttacttaccagcagcaggcttctgatcact 425
            |||||| |||||||||||||||||||||||
Sbjct: 3313 ttacttgccagcagcaggcttctgatcact 3284



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 80   agcttttgacatccttgcataaaactgct 108
            |||||||||||||| ||||||||||||||
Sbjct: 3634 agcttttgacatccatgcataaaactgct 3606



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 331  cagaattagcagttagctcgc 351
            |||||||||||||||||||||
Sbjct: 3373 cagaattagcagttagctcgc 3353
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 62/66 (93%)
 Strand = Plus / Plus

                                                                            
Query: 122      ttctatgcacctccagctttccaccatgggaggataacctactacacacaagcatcactc 181
                ||||||||||||||||||||||| |||| ||||||||||||||||||| ||| |||||||
Sbjct: 22996249 ttctatgcacctccagctttccatcatgagaggataacctactacacaaaagtatcactc 22996308

                      
Query: 182      ccatca 187
                ||||||
Sbjct: 22996309 ccatca 22996314



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                          
Query: 400      ttaccagcagcaggcttctgatcact 425
                ||||||||||||||||||||||||||
Sbjct: 22996657 ttaccagcagcaggcttctgatcact 22996682



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 80       agcttttgacatccttgcataaaactgct 108
                |||||||||||||| ||||||||||||||
Sbjct: 22996211 agcttttgacatccatgcataaaactgct 22996239



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 331      cagaattagcagttagctcgc 351
                |||||||||||||||||||||
Sbjct: 22996472 cagaattagcagttagctcgc 22996492
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>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1121_A05
          Length = 172668

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 62/66 (93%)
 Strand = Plus / Plus

                                                                         
Query: 122   ttctatgcacctccagctttccaccatgggaggataacctactacacacaagcatcactc 181
             ||||||||||||||||||||||| |||| ||||||||||||||||||| ||| |||||||
Sbjct: 71463 ttctatgcacctccagctttccatcatgagaggataacctactacacaaaagtatcactc 71522

                   
Query: 182   ccatca 187
             ||||||
Sbjct: 71523 ccatca 71528



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 400   ttaccagcagcaggcttctgatcact 425
             ||||||||||||||||||||||||||
Sbjct: 71871 ttaccagcagcaggcttctgatcact 71896



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 80    agcttttgacatccttgcataaaactgct 108
             |||||||||||||| ||||||||||||||
Sbjct: 71425 agcttttgacatccatgcataaaactgct 71453



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 331   cagaattagcagttagctcgc 351
             |||||||||||||||||||||
Sbjct: 71686 cagaattagcagttagctcgc 71706
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>dbj|AK099771.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095D13, full
            insert sequence
          Length = 3961

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 62/66 (93%)
 Strand = Plus / Minus

                                                                        
Query: 122  ttctatgcacctccagctttccaccatgggaggataacctactacacacaagcatcactc 181
            ||||||||||||||||||||||| |||| ||||||||||||||||||| ||| |||||||
Sbjct: 3596 ttctatgcacctccagctttccatcatgagaggataacctactacacaaaagtatcactc 3537

                  
Query: 182  ccatca 187
            ||||||
Sbjct: 3536 ccatca 3531



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 396  ttacttaccagcagcaggcttctgatcact 425
            |||||| |||||||||||||||||||||||
Sbjct: 3313 ttacttgccagcagcaggcttctgatcact 3284



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 80   agcttttgacatccttgcataaaactgct 108
            |||||||||||||| ||||||||||||||
Sbjct: 3634 agcttttgacatccatgcataaaactgct 3606



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 331  cagaattagcagttagctcgc 351
            |||||||||||||||||||||
Sbjct: 3373 cagaattagcagttagctcgc 3353
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>dbj|AK067380.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099N15, full
            insert sequence
          Length = 1636

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 61/66 (92%)
 Strand = Plus / Minus

                                                                        
Query: 122  ttctatgcacctccagctttccaccatgggaggataacctactacacacaagcatcactc 181
            ||||||||||||||||||||||| |||| |||||||||| |||||||| ||| |||||||
Sbjct: 1496 ttctatgcacctccagctttccatcatgagaggataacccactacacaaaagtatcactc 1437

                  
Query: 182  ccatca 187
            ||||||
Sbjct: 1436 ccatca 1431



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 396  ttacttaccagcagcaggcttctgatcact 425
            |||||| |||||||||||||||||||||||
Sbjct: 1213 ttacttgccagcagcaggcttctgatcact 1184



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 80   agcttttgacatccttgcataaaactgct 108
            |||||||||||||| ||||||||||||||
Sbjct: 1534 agcttttgacatccatgcataaaactgct 1506



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 331  cagaattagcagttagctcgc 351
            |||||||||||||||||||||
Sbjct: 1273 cagaattagcagttagctcgc 1253
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>emb|BX323810.8| Zebrafish DNA sequence from clone CH211-153K16 in linkage group 14,
             complete sequence
          Length = 166625

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1     aacaaaaacgaacaaatctaaa 22
             ||||||||||||||||||||||
Sbjct: 84774 aacaaaaacgaacaaatctaaa 84753
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>gb|AC119236.8| Mus musculus chromosome 19, clone RP24-213B12, complete sequence
          Length = 163348

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 130   acctccagctttccaccatgg 150
             |||||||||||||||||||||
Sbjct: 77639 acctccagctttccaccatgg 77619
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>gb|AC091939.3| Homo sapiens chromosome 5 clone RP11-32D16, complete sequence
          Length = 190346

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 32     gcagcagttggaggggaggggagag 56
              |||||||| ||||||||||||||||
Sbjct: 117391 gcagcagtaggaggggaggggagag 117415
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>gb|AC010414.8| Homo sapiens chromosome 5 clone CTD-2169P11, complete sequence
          Length = 145156

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 32     gcagcagttggaggggaggggagag 56
              |||||||| ||||||||||||||||
Sbjct: 143364 gcagcagtaggaggggaggggagag 143388
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 39       ttggaggggaggggagagaag 59
                |||||||||||||||||||||
Sbjct: 24097923 ttggaggggaggggagagaag 24097943
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>dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0410E03
          Length = 164839

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 39    ttggaggggaggggagagaag 59
             |||||||||||||||||||||
Sbjct: 73745 ttggaggggaggggagagaag 73765
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>gb|AC151978.3| Mus musculus BAC clone RP24-545C19 from 19, complete sequence
          Length = 163426

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 130    acctccagctttccaccatgg 150
              |||||||||||||||||||||
Sbjct: 148806 acctccagctttccaccatgg 148826
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>gb|AC161047.2| Mus musculus BAC clone RP24-189I12 from chromosome 12, complete
            sequence
          Length = 153447

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 28   cagagcagcagttggagggga 48
            |||||||||||||||||||||
Sbjct: 3105 cagagcagcagttggagggga 3085
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>emb|AL603804.18| Mouse DNA sequence from clone RP23-470C16 on chromosome 11, complete
             sequence
          Length = 189196

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 130   acctccagctttccaccatgg 150
             |||||||||||||||||||||
Sbjct: 46907 acctccagctttccaccatgg 46927
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>emb|AL928832.7| Mouse DNA sequence from clone RP23-261N18 on chromosome 2, complete
              sequence
          Length = 198993

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 53     agagaagttcagagagagaga 73
              |||||||||||||||||||||
Sbjct: 159460 agagaagttcagagagagaga 159480
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>gb|AC118700.10| Mus musculus chromosome 3, clone RP23-24O21, complete sequence
          Length = 220310

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 78    ctagcttttgacatccttgcataaaact 105
             |||||||||| || ||||||||||||||
Sbjct: 88155 ctagcttttgtcaaccttgcataaaact 88128
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>ref|NM_015659.1| Homo sapiens ribosomal L1 domain containing 1 (RSL1D1), mRNA
          Length = 1961

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 370  ttcccatgctctggcgtctg 389
            ||||||||||||||||||||
Sbjct: 1068 ttcccatgctctggcgtctg 1049
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>gb|AC121510.10| Mus musculus chromosome 19, clone RP24-371N19, complete sequence
          Length = 168677

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    tggaggggaggggagagaag 59
             ||||||||||||||||||||
Sbjct: 89886 tggaggggaggggagagaag 89867
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>gb|AC148990.6| Mus musculus BAC clone RP24-466N11 from chromosome 7, complete sequence
          Length = 198504

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    cagctttccaccatgggagg 154
              ||||||||||||||||||||
Sbjct: 122345 cagctttccaccatgggagg 122364
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>gb|AF078157.1| Caenorhabditis elegans cosmid F25E5, complete sequence
          Length = 38358

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   catcatcatcttcttcgacg 261
             ||||||||||||||||||||
Sbjct: 17947 catcatcatcttcttcgacg 17966
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>gb|AC167134.5| Mus musculus chromosome 1, clone RP23-59E7, complete sequence
          Length = 140039

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 365   cagcattcccatgctctggc 384
             ||||||||||||||||||||
Sbjct: 19488 cagcattcccatgctctggc 19507
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>gb|AC120397.7| Mus musculus chromosome 18, clone RP24-332E21, complete sequence
          Length = 178502

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 50     gggagagaagttcagagagagaga 73
              |||||||||||| |||||||||||
Sbjct: 135826 gggagagaagttaagagagagaga 135849
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>gb|AC126929.3| Mus musculus BAC clone RP24-465A20 from chromosome 17, complete
             sequence
          Length = 168712

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    tggaggggaggggagagaag 59
             ||||||||||||||||||||
Sbjct: 45334 tggaggggaggggagagaag 45315
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>gb|AC073248.5| Homo sapiens BAC clone CTD-2009F14 from 7, complete sequence
          Length = 128294

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 50    gggagagaagttcagagagagaga 73
             |||||||||||| |||||||||||
Sbjct: 96501 gggagagaagttgagagagagaga 96478
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>emb|AL356215.11| Human DNA sequence from clone RP4-607I7 on chromosome 11p11.2-12
             Contains the start of the CD44 (CD44 antigen (homing
             function andnIndian blood group system)) gene, ESTs, STSs,
             GSSs and a CpG island, complete sequence
          Length = 150533

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   ctttccaccatgggaggata 157
             ||||||||||||||||||||
Sbjct: 83586 ctttccaccatgggaggata 83567
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>gb|AC114699.5| Rattus norvegicus 19 BAC CH230-235A3 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 224930

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    ggaggggaggggagagaagt 60
             ||||||||||||||||||||
Sbjct: 57492 ggaggggaggggagagaagt 57511
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>gb|AC162299.6| Mus musculus chromosome 1, clone RP24-320H7, complete sequence
          Length = 130226

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 365    cagcattcccatgctctggc 384
              ||||||||||||||||||||
Sbjct: 123594 cagcattcccatgctctggc 123613
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>gb|AC129507.9| Homo sapiens chromosome 17, clone RP11-1260E13, complete sequence
          Length = 199102

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 378    ctctggcgtctgggtccttt 397
              ||||||||||||||||||||
Sbjct: 194033 ctctggcgtctgggtccttt 194052
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>gb|AC079848.16| Homo sapiens 3 BAC RP11-124N2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 161987

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     agagaccagctagcttttga 88
              ||||||||||||||||||||
Sbjct: 116040 agagaccagctagcttttga 116021
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>gb|AC093572.18| Pan troglodytes clone rp43-25g23, complete sequence
          Length = 195652

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 40   tggaggggaggggagagaag 59
            ||||||||||||||||||||
Sbjct: 4947 tggaggggaggggagagaag 4966
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>gb|AC021035.8| Homo sapiens chromosome 10 clone RP11-381K7, complete sequence
          Length = 173791

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   gctttccaccatgggaggat 156
             ||||||||||||||||||||
Sbjct: 76092 gctttccaccatgggaggat 76111
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>gb|AC096755.2| Homo sapiens BAC clone RP11-519M16 from 4, complete sequence
          Length = 182440

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    aacctactacacacaagcat 176
              ||||||||||||||||||||
Sbjct: 180491 aacctactacacacaagcat 180472
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>gb|AC079857.5| Homo sapiens BAC clone RP11-589E1 from 4, complete sequence
          Length = 186219

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 157 aacctactacacacaagcat 176
           ||||||||||||||||||||
Sbjct: 51  aacctactacacacaagcat 32
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>gb|AC010260.7| Homo sapiens chromosome 5 clone CTC-458I2, complete sequence
          Length = 150528

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    tggaggggaggggagagaag 59
             ||||||||||||||||||||
Sbjct: 17254 tggaggggaggggagagaag 17273
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>gb|AC137898.6| Homo sapiens chromosome 17, clone RP11-101O21, complete sequence
          Length = 133040

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 54   gagaagttcagagagagaga 73
            ||||||||||||||||||||
Sbjct: 7609 gagaagttcagagagagaga 7628
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>gb|AC012636.5|AC012636 Homo sapiens chromosome 5 clone CTD-2201I18, complete sequence
          Length = 175561

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     tggaggggaggggagagaag 59
              ||||||||||||||||||||
Sbjct: 164775 tggaggggaggggagagaag 164794
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>ref|NM_072515.1| Caenorhabditis elegans F25E5.10 (F25E5.10) mRNA, complete cds
          Length = 1206

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  catcatcatcttcttcgacg 261
            ||||||||||||||||||||
Sbjct: 1099 catcatcatcttcttcgacg 1080
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>gb|AC093892.3| Homo sapiens BAC clone RP11-702L18 from 2, complete sequence
          Length = 111078

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   ctttccaccatgggaggata 157
             ||||||||||||||||||||
Sbjct: 10891 ctttccaccatgggaggata 10910
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>gb|AC102947.13| Homo sapiens chromosome 17, clone CTD-2179N1, complete sequence
          Length = 52688

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    gagaagttcagagagagaga 73
             ||||||||||||||||||||
Sbjct: 47016 gagaagttcagagagagaga 47035
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>gb|AC107675.13| Mus musculus chromosome 1, clone RP24-471N7, complete sequence
          Length = 127374

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 365   cagcattcccatgctctggc 384
             ||||||||||||||||||||
Sbjct: 60771 cagcattcccatgctctggc 60752
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>gb|AC007963.7|AC007963 Homo sapiens chromosome 17, clone CTD-2010G8, complete sequence
          Length = 133488

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    gagaagttcagagagagaga 73
             ||||||||||||||||||||
Sbjct: 28878 gagaagttcagagagagaga 28897
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>gb|AC010888.12| Homo sapiens BAC clone RP11-418N16 from 2, complete sequence
          Length = 191863

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    cagctagcttttgacatcct 94
             ||||||||||||||||||||
Sbjct: 51972 cagctagcttttgacatcct 51991
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>gb|AC079866.14| Homo sapiens 12 BAC RP11-274J7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 41442

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    gagaagttcagagagagaga 73
             ||||||||||||||||||||
Sbjct: 29313 gagaagttcagagagagaga 29332
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>gb|AC156599.2| Laccaria bicolor clone JGIAHZW-3X, complete sequence
          Length = 44441

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    cagttggaggggaggggaga 55
             ||||||||||||||||||||
Sbjct: 27266 cagttggaggggaggggaga 27285
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>gb|AY154473.1| Homo sapiens cellular senescence inhibited gene protein (CSIG) mRNA,
            complete cds
          Length = 1961

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 370  ttcccatgctctggcgtctg 389
            ||||||||||||||||||||
Sbjct: 1068 ttcccatgctctggcgtctg 1049
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>dbj|BS000103.1| Pan troglodytes chromosome 22 clone:PTB-031J04, map 22, complete
             sequences
          Length = 164274

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   ctttccaccatgggaggata 157
             ||||||||||||||||||||
Sbjct: 63594 ctttccaccatgggaggata 63575
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>dbj|AP001693.1| Homo sapiens genomic DNA, chromosome 21q, section 37/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 138    ctttccaccatgggaggata 157
              ||||||||||||||||||||
Sbjct: 160740 ctttccaccatgggaggata 160721
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>gb|AC108848.12| Mus musculus chromosome 5, clone RP23-300K5, complete sequence
          Length = 231380

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   ttacttaccagcagcaggct 415
             ||||||||||||||||||||
Sbjct: 84864 ttacttaccagcagcaggct 84883
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>gb|AC148120.4| Saimiri boliviensis boliviensis clone CH254-165N18, complete sequence
          Length = 199625

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     tggaggggaggggagagaag 59
              ||||||||||||||||||||
Sbjct: 159803 tggaggggaggggagagaag 159822
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>dbj|AP000354.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB1674E1
          Length = 164756

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    tggaggggaggggagagaag 59
             ||||||||||||||||||||
Sbjct: 86011 tggaggggaggggagagaag 85992
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>dbj|AP000220.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region,
             clone:B2291C14, complete sequence
          Length = 61209

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   ctttccaccatgggaggata 157
             ||||||||||||||||||||
Sbjct: 21036 ctttccaccatgggaggata 21017
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>dbj|AP000136.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region, clone
             B2291C14-R44F3, segment 1/10, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   ctttccaccatgggaggata 157
             ||||||||||||||||||||
Sbjct: 21036 ctttccaccatgggaggata 21017
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>dbj|AP000084.1| Homo sapiens genomic DNA of 21q22.1, APP related, B2291C14-T1533
             region, segment 1/7
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   ctttccaccatgggaggata 157
             ||||||||||||||||||||
Sbjct: 21036 ctttccaccatgggaggata 21017


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,513,870
Number of Sequences: 3902068
Number of extensions: 8513870
Number of successful extensions: 147364
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 147142
Number of HSP's gapped (non-prelim): 222
length of query: 439
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 417
effective length of database: 17,147,199,772
effective search space: 7150382304924
effective search space used: 7150382304924
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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