ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63l06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464895.1| Oryza sativa (japonica cultivar-group), mRNA 246 7e-62
2dbj|AK102439.1| Oryza sativa (japonica cultivar-group) cDNA clon... 242 1e-60
3dbj|AK120985.1| Oryza sativa (japonica cultivar-group) cDNA clon... 234 3e-58
4gb|AY104281.1| Zea mays PCO091532 mRNA sequence 202 9e-49
5ref|XM_464894.1| Oryza sativa (japonica cultivar-group), mRNA 186 6e-44
6dbj|AK102256.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 6e-44
7dbj|AK070611.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 9e-43
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
9dbj|AP006160.3| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
10dbj|AP005803.3| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
11gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome... 133 7e-28
12dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 133 7e-28
13gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 133 7e-28
14gb|AC116778.9| Mus musculus chromosome 1, clone RP24-481H3, comp... 44 0.52
15gb|AC158940.8| Mus musculus chromosome 1, clone RP24-284D7, comp... 44 0.52
16emb|AL445213.11| Human DNA sequence from clone RP13-52K8 on chro... 44 0.52
17ref|XM_369473.1| Magnaporthe grisea 70-15 chromosome III hypothe... 42 2.1
18gb|AC137529.3| Carollia perspicillata clone 6M17, complete sequence 42 2.1
19gb|AC148317.3| Pan troglodytes BAC clone CH251-519K22 from chrom... 42 2.1
20gb|AC158384.2| Mus musculus BAC clone RP24-97I24 from chromosome... 42 2.1
21gb|AC159231.2| Mus musculus BAC clone RP24-387F20 from chromosom... 42 2.1
22emb|CT009604.11| Mouse DNA sequence from clone RP23-4J22 on chro... 42 2.1
23gb|AC148461.2| Xenopus tropicalis clone CH216-3P14, complete seq... 42 2.1
24gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold 42 2.1
25gb|AC093363.12| Mus musculus chromosome 7, clone RP23-60O3, comp... 40 8.1
26ref|XM_456339.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 8.1
27ref|XM_456964.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 8.1
28gb|AC145805.2| Xenopus tropicalis clone CH216-85O8, complete seq... 40 8.1
29gb|AF198031.1| Mus musculus enamel matrix serine proteinase 1 pr... 40 8.1
30gb|AC134858.6| Mus musculus BAC clone RP23-361A18 from chromosom... 40 8.1
31emb|AL731559.8| Human DNA sequence from clone RP11-495F22 on chr... 40 8.1
32emb|AL391260.13| Human DNA sequence from clone RP11-328B14 on ch... 40 8.1
33emb|AL356010.9| Human DNA sequence from clone RP11-136B18 on chr... 40 8.1
34emb|AL158050.8| Human DNA sequence from clone RP3-437C15 on chro... 40 8.1
35emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS... 40 8.1
36emb|BX572635.17| Zebrafish DNA sequence from clone CH211-235O23 ... 40 8.1
37gb|AC106865.4| Homo sapiens BAC clone RP11-153M7 from 4, complet... 40 8.1
38gb|AC011390.3| Homo sapiens chromosome 5 clone CTB-176I15, compl... 40 8.1
39gb|AC018719.4| Homo sapiens BAC clone RP11-573N21 from Xq23, com... 40 8.1
40gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold 40 8.1
41gb|AC016568.5| Homo sapiens chromosome 5 clone CTC-566C5, comple... 40 8.1
42gb|AC091971.4| Homo sapiens chromosome 5 clone RP11-511F22, comp... 40 8.1
43emb|AJ243213.1|HSA243213 Homo sapiens partial 5-HT4 receptor gen... 40 8.1 
>ref|XM_464895.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 393

 Score =  246 bits (124), Expect = 7e-62
 Identities = 217/248 (87%)
 Strand = Plus / Minus

                                                                       
Query: 282 ggtaactcttcctccctaaaccaccttggaggatcatatccctgtccaccaagaggatta 341
           |||| |||||||||   |||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 383 ggtagctcttcctcatcaaaccaccttgggggatcatatccatgaccaccaagaggatta 324

                                                                       
Query: 342 caacggcacagacgccatgctgtcaagattgtacctttcgcgacaccatatcttttgtac 401
           || ||||| |||||||| ||||||||||||||||| || || ||||| ||| ||||||| 
Sbjct: 323 cagcggcatagacgccaagctgtcaagattgtaccctttgcaacaccgtattttttgtat 264

                                                                       
Query: 402 gcctgcatagagtaatcgctgcacgttggcacataacgacagcttgaaggcagtaagggt 461
           || ||||||||||| || ||||| |||||||||||||| |||||||| || |||||||||
Sbjct: 263 gcttgcatagagtactcactgcaagttggcacataacggcagcttgagggtagtaagggt 204

                                                                       
Query: 462 gatatctctcttttgtagaattttagcatcgatagtgccatgttgactcccatattgttg 521
           ||||| ||||||||||| ||||||||||| |||||||||| |||||||||||  |  |||
Sbjct: 203 gatatttctcttttgtaaaattttagcatggatagtgccacgttgactcccaagtcattg 144

                   
Query: 522 acttcctc 529
           ||||||||
Sbjct: 143 acttcctc 136
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>dbj|AK102439.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093K10, full
           insert sequence
          Length = 3653

 Score =  242 bits (122), Expect = 1e-60
 Identities = 263/310 (84%)
 Strand = Plus / Minus

                                                                       
Query: 268 gccatcattcctcaggtaactcttcctccctaaaccaccttggaggatcatatccctgtc 327
           ||||||||| ||  |||||||||||||| | |||||||||||| |||||||| || || |
Sbjct: 469 gccatcattgctttggtaactcttcctcaccaaaccaccttgggggatcataaccatgac 410

                                                                       
Query: 328 caccaagaggattacaacggcacagacgccatgctgtcaagattgtacctttcgcgacac 387
           ||||||||||||||||| |||| |||||||| ||||||||||||||||| || || || |
Sbjct: 409 caccaagaggattacaatggcatagacgccaagctgtcaagattgtaccctttgcaacgc 350

                                                                       
Query: 388 catatcttttgtacgcctgcatagagtaatcgctgcacgttggcacataacgacagcttg 447
           | ||| ||||||| || ||||||||||| | |||||| |||||||||||||| |||||||
Sbjct: 349 cgtattttttgtatgcttgcatagagtactggctgcaagttggcacataacggcagcttg 290

                                                                       
Query: 448 aaggcagtaagggtgatatctctcttttgtagaattttagcatcgatagtgccatgttga 507
           | || |||||||| ||||| ||||||||||| ||||||||||| ||||||||||  ||||
Sbjct: 289 agggtagtaagggcgatatttctcttttgtaaaattttagcatggatagtgccacattga 230

                                                                       
Query: 508 ctcccatattgttgacttcctcatcgtcgtcggcagtacagcagacccgcaccatcggaa 567
           ||||||  |  ||||||||||| || || || ||||  ||| ||||||||| | | || |
Sbjct: 229 ctcccaagtcattgacttcctcttcttcatcagcagcgcagtagacccgcatcgttggga 170

                     
Query: 568 tccttctctt 577
           ||||||||||
Sbjct: 169 tccttctctt 160
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>dbj|AK120985.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042E02, full
           insert sequence
          Length = 4316

 Score =  234 bits (118), Expect = 3e-58
 Identities = 262/310 (84%)
 Strand = Plus / Minus

                                                                       
Query: 268 gccatcattcctcaggtaactcttcctccctaaaccaccttggaggatcatatccctgtc 327
           ||||||||| ||  |||||||||||||| | |||||||||||| |||||||| || || |
Sbjct: 426 gccatcattgctttggtaactcttcctcaccaaaccaccttgggggatcataaccatgac 367

                                                                       
Query: 328 caccaagaggattacaacggcacagacgccatgctgtcaagattgtacctttcgcgacac 387
           ||||||||||||||||| |||| |||||||| ||||||||||||||||| || || || |
Sbjct: 366 caccaagaggattacaatggcatagacgccaagctgtcaagattgtaccctttgcaacgc 307

                                                                       
Query: 388 catatcttttgtacgcctgcatagagtaatcgctgcacgttggcacataacgacagcttg 447
           | ||| ||||||| || |||||||||||   |||||| |||||||||||||| |||||||
Sbjct: 306 cgtattttttgtatgcttgcatagagtacaggctgcaagttggcacataacggcagcttg 247

                                                                       
Query: 448 aaggcagtaagggtgatatctctcttttgtagaattttagcatcgatagtgccatgttga 507
           | || |||||||| ||||| ||||||||||| ||||||||||| ||||||||||  ||||
Sbjct: 246 agggtagtaagggcgatatttctcttttgtaaaattttagcatggatagtgccacattga 187

                                                                       
Query: 508 ctcccatattgttgacttcctcatcgtcgtcggcagtacagcagacccgcaccatcggaa 567
           ||||||  |  ||||||||||| || || || ||||  ||| ||||||||| | | || |
Sbjct: 186 ctcccaagtcattgacttcctcttcttcatcagcagcgcagtagacccgcatcgttggga 127

                     
Query: 568 tccttctctt 577
           ||||||||||
Sbjct: 126 tccttctctt 117
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>gb|AY104281.1| Zea mays PCO091532 mRNA sequence
          Length = 659

 Score =  202 bits (102), Expect = 9e-49
 Identities = 207/242 (85%)
 Strand = Plus / Minus

                                                                       
Query: 288 tcttcctccctaaaccaccttggaggatcatatccctgtccaccaagaggattacaacgg 347
           |||||||| | ||||||  ||||||||||||| || | ||||||||||||||||||||||
Sbjct: 443 tcttcctcgccaaaccattttggaggatcatacccatatccaccaagaggattacaacgg 384

                                                                       
Query: 348 cacagacgccatgctgtcaagattgtacctttcgcgacaccatatcttttgtacgcctgc 407
           || || ||||| || |||||||| | ||| ||  | |||||||||| |||||||||||||
Sbjct: 383 caaaggcgccaagcagtcaagatggaaccctttacaacaccatatcgtttgtacgcctgc 324

                                                                       
Query: 408 atagagtaatcgctgcacgttggcacataacgacagcttgaaggcagtaagggtgatatc 467
           |||||||| || ||||| ||||| ||||| || ||||||||||| ||||| |||||||| 
Sbjct: 323 atagagtactcactgcaagttggtacatatcggcagcttgaaggtagtaaaggtgatatt 264

                                                                       
Query: 468 tctcttttgtagaattttagcatcgatagtgccatgttgactcccatattgttgacttcc 527
           |||| |||||| ||||||||||| ||||||||||| |||||||| | ||  |||||||||
Sbjct: 263 tctcgtttgtaaaattttagcatggatagtgccatattgactccaaaatctttgacttcc 204

             
Query: 528 tc 529
           ||
Sbjct: 203 tc 202
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>ref|XM_464894.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 784

 Score =  186 bits (94), Expect = 6e-44
 Identities = 166/190 (87%)
 Strand = Plus / Minus

                                                                       
Query: 282 ggtaactcttcctccctaaaccaccttggaggatcatatccctgtccaccaagaggatta 341
           |||| |||||||||   |||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 421 ggtagctcttcctcatcaaaccaccttgggggatcatatccatgaccaccaagaggatta 362

                                                                       
Query: 342 caacggcacagacgccatgctgtcaagattgtacctttcgcgacaccatatcttttgtac 401
           || ||||| |||||||| ||||||||||||||||| || || ||||| ||| ||||||| 
Sbjct: 361 cagcggcatagacgccaagctgtcaagattgtaccctttgcaacaccgtattttttgtat 302

                                                                       
Query: 402 gcctgcatagagtaatcgctgcacgttggcacataacgacagcttgaaggcagtaagggt 461
           || ||||||||||| || ||||| |||||||||||||| |||||||| || |||||||||
Sbjct: 301 gcttgcatagagtactcactgcaagttggcacataacggcagcttgagggtagtaagggt 242

                     
Query: 462 gatatctctc 471
           ||||| ||||
Sbjct: 241 gatatttctc 232
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>dbj|AK102256.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088I10, full
           insert sequence
          Length = 784

 Score =  186 bits (94), Expect = 6e-44
 Identities = 166/190 (87%)
 Strand = Plus / Minus

                                                                       
Query: 282 ggtaactcttcctccctaaaccaccttggaggatcatatccctgtccaccaagaggatta 341
           |||| |||||||||   |||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 421 ggtagctcttcctcatcaaaccaccttgggggatcatatccatgaccaccaagaggatta 362

                                                                       
Query: 342 caacggcacagacgccatgctgtcaagattgtacctttcgcgacaccatatcttttgtac 401
           || ||||| |||||||| ||||||||||||||||| || || ||||| ||| ||||||| 
Sbjct: 361 cagcggcatagacgccaagctgtcaagattgtaccctttgcaacaccgtattttttgtat 302

                                                                       
Query: 402 gcctgcatagagtaatcgctgcacgttggcacataacgacagcttgaaggcagtaagggt 461
           || ||||||||||| || ||||| |||||||||||||| |||||||| || |||||||||
Sbjct: 301 gcttgcatagagtactcactgcaagttggcacataacggcagcttgagggtagtaagggt 242

                     
Query: 462 gatatctctc 471
           ||||| ||||
Sbjct: 241 gatatttctc 232
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>dbj|AK070611.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062P12, full
            insert sequence
          Length = 1644

 Score =  182 bits (92), Expect = 9e-43
 Identities = 176/204 (86%)
 Strand = Plus / Minus

                                                                        
Query: 268  gccatcattcctcaggtaactcttcctccctaaaccaccttggaggatcatatccctgtc 327
            ||||||||| ||  |||||||||||||| | |||||||||||| |||||||| || || |
Sbjct: 1153 gccatcattgctttggtaactcttcctcaccaaaccaccttgggggatcataaccatgac 1094

                                                                        
Query: 328  caccaagaggattacaacggcacagacgccatgctgtcaagattgtacctttcgcgacac 387
            ||||||||||||||||| |||| |||||||| ||||||||||||||||| || || || |
Sbjct: 1093 caccaagaggattacaatggcatagacgccaagctgtcaagattgtaccctttgcaacgc 1034

                                                                        
Query: 388  catatcttttgtacgcctgcatagagtaatcgctgcacgttggcacataacgacagcttg 447
            | ||| ||||||| || ||||||||||| | |||||| |||||||||||||| |||||||
Sbjct: 1033 cgtattttttgtatgcttgcatagagtactggctgcaagttggcacataacggcagcttg 974

                                    
Query: 448  aaggcagtaagggtgatatctctc 471
            | || |||||||| ||||| ||||
Sbjct: 973  agggtagtaagggcgatatttctc 950



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 471 cttttgtagaattttagcatcgatagtgccatgttgactcccatattgttgacttcctc 529
           |||||||| ||||||||||| ||||||||||  ||||||||||  |  |||||||||||
Sbjct: 834 cttttgtaaaattttagcatggatagtgccacattgactcccaagtcattgacttcctc 776
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  149 bits (75), Expect = 1e-32
 Identities = 126/143 (88%)
 Strand = Plus / Plus

                                                                           
Query: 329     accaagaggattacaacggcacagacgccatgctgtcaagattgtacctttcgcgacacc 388
               ||||||||||||||| ||||| |||||||| ||||||||||||||||| || || |||||
Sbjct: 9053299 accaagaggattacagcggcatagacgccaagctgtcaagattgtaccctttgcaacacc 9053358

                                                                           
Query: 389     atatcttttgtacgcctgcatagagtaatcgctgcacgttggcacataacgacagcttga 448
                ||| ||||||| || ||||||||||| || ||||| |||||||||||||| ||||||||
Sbjct: 9053359 gtattttttgtatgcttgcatagagtactcactgcaagttggcacataacggcagcttga 9053418

                                      
Query: 449     aggcagtaagggtgatatctctc 471
                || |||||||||||||| ||||
Sbjct: 9053419 gggtagtaagggtgatatttctc 9053441



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                          
Query: 471     cttttgtagaattttagcatcgatagtgccatgttgactccca 513
               |||||||| ||||||||||| |||||||||| |||||||||||
Sbjct: 9053565 cttttgtaaaattttagcatggatagtgccacgttgactccca 9053607



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                 
Query: 282     ggtaactcttcctccctaaaccaccttggaggatcatatccctgtccacc 331
               |||| |||||||||   |||||||||||| ||||||||||| || |||||
Sbjct: 9053143 ggtagctcttcctcatcaaaccaccttgggggatcatatccatgaccacc 9053192
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>dbj|AP006160.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1178F07
          Length = 144454

 Score =  149 bits (75), Expect = 1e-32
 Identities = 126/143 (88%)
 Strand = Plus / Plus

                                                                         
Query: 329   accaagaggattacaacggcacagacgccatgctgtcaagattgtacctttcgcgacacc 388
             ||||||||||||||| ||||| |||||||| ||||||||||||||||| || || |||||
Sbjct: 93745 accaagaggattacagcggcatagacgccaagctgtcaagattgtaccctttgcaacacc 93804

                                                                         
Query: 389   atatcttttgtacgcctgcatagagtaatcgctgcacgttggcacataacgacagcttga 448
              ||| ||||||| || ||||||||||| || ||||| |||||||||||||| ||||||||
Sbjct: 93805 gtattttttgtatgcttgcatagagtactcactgcaagttggcacataacggcagcttga 93864

                                    
Query: 449   aggcagtaagggtgatatctctc 471
              || |||||||||||||| ||||
Sbjct: 93865 gggtagtaagggtgatatttctc 93887



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                        
Query: 471   cttttgtagaattttagcatcgatagtgccatgttgactccca 513
             |||||||| ||||||||||| |||||||||| |||||||||||
Sbjct: 94011 cttttgtaaaattttagcatggatagtgccacgttgactccca 94053



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 282   ggtaactcttcctccctaaaccaccttggaggatcatatccctgtccacc 331
             |||| |||||||||   |||||||||||| ||||||||||| || |||||
Sbjct: 93589 ggtagctcttcctcatcaaaccaccttgggggatcatatccatgaccacc 93638
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>dbj|AP005803.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0060K08
          Length = 159626

 Score =  149 bits (75), Expect = 1e-32
 Identities = 126/143 (88%)
 Strand = Plus / Plus

                                                                          
Query: 329    accaagaggattacaacggcacagacgccatgctgtcaagattgtacctttcgcgacacc 388
              ||||||||||||||| ||||| |||||||| ||||||||||||||||| || || |||||
Sbjct: 125908 accaagaggattacagcggcatagacgccaagctgtcaagattgtaccctttgcaacacc 125967

                                                                          
Query: 389    atatcttttgtacgcctgcatagagtaatcgctgcacgttggcacataacgacagcttga 448
               ||| ||||||| || ||||||||||| || ||||| |||||||||||||| ||||||||
Sbjct: 125968 gtattttttgtatgcttgcatagagtactcactgcaagttggcacataacggcagcttga 126027

                                     
Query: 449    aggcagtaagggtgatatctctc 471
               || |||||||||||||| ||||
Sbjct: 126028 gggtagtaagggtgatatttctc 126050



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                         
Query: 471    cttttgtagaattttagcatcgatagtgccatgttgactcccatattgttgacttcctc 529
              |||||||| ||||||||||| |||||||||| |||||||||||  |  |||||||||||
Sbjct: 126174 cttttgtaaaattttagcatggatagtgccacgttgactcccaagtcattgacttcctc 126232



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                
Query: 282    ggtaactcttcctccctaaaccaccttggaggatcatatccctgtccacc 331
              |||| |||||||||   |||||||||||| ||||||||||| || |||||
Sbjct: 125752 ggtagctcttcctcatcaaaccaccttgggggatcatatccatgaccacc 125801
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>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0003C04 map S10003, complete sequence
          Length = 119238

 Score =  133 bits (67), Expect = 7e-28
 Identities = 124/143 (86%)
 Strand = Plus / Plus

                                                                         
Query: 329   accaagaggattacaacggcacagacgccatgctgtcaagattgtacctttcgcgacacc 388
             |||||||||||||||| |||| |||||||| ||||||||||||||||| || || || ||
Sbjct: 76757 accaagaggattacaatggcatagacgccaagctgtcaagattgtaccctttgcaacgcc 76816

                                                                         
Query: 389   atatcttttgtacgcctgcatagagtaatcgctgcacgttggcacataacgacagcttga 448
              ||| ||||||| || ||||||||||| | |||||| |||||||||||||| ||||||||
Sbjct: 76817 gtattttttgtatgcttgcatagagtactggctgcaagttggcacataacggcagcttga 76876

                                    
Query: 449   aggcagtaagggtgatatctctc 471
              || |||||||| ||||| ||||
Sbjct: 76877 gggtagtaagggcgatatttctc 76899



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 268   gccatcattcctcaggtaactcttcctccctaaaccaccttggaggatcata 319
             ||||||||| ||  |||||||||||||| | |||||||||||| ||||||||
Sbjct: 76592 gccatcattgctttggtaactcttcctcaccaaaccaccttgggggatcata 76643



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 471   cttttgtagaattttagcatcgatagtgccatgttgactccca 513
             |||||||| ||||||||||| ||||||||||  ||||||||||
Sbjct: 77015 cttttgtaaaattttagcatggatagtgccacattgactccca 77057
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  133 bits (67), Expect = 7e-28
 Identities = 124/143 (86%)
 Strand = Plus / Plus

                                                                            
Query: 329      accaagaggattacaacggcacagacgccatgctgtcaagattgtacctttcgcgacacc 388
                |||||||||||||||| |||| |||||||| ||||||||||||||||| || || || ||
Sbjct: 28271956 accaagaggattacaatggcatagacgccaagctgtcaagattgtaccctttgcaacgcc 28272015

                                                                            
Query: 389      atatcttttgtacgcctgcatagagtaatcgctgcacgttggcacataacgacagcttga 448
                 ||| ||||||| || ||||||||||| | |||||| |||||||||||||| ||||||||
Sbjct: 28272016 gtattttttgtatgcttgcatagagtactggctgcaagttggcacataacggcagcttga 28272075

                                       
Query: 449      aggcagtaagggtgatatctctc 471
                 || |||||||| ||||| ||||
Sbjct: 28272076 gggtagtaagggcgatatttctc 28272098



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                    
Query: 268      gccatcattcctcaggtaactcttcctccctaaaccaccttggaggatcata 319
                ||||||||| ||  |||||||||||||| | |||||||||||| ||||||||
Sbjct: 28271791 gccatcattgctttggtaactcttcctcaccaaaccaccttgggggatcata 28271842



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                           
Query: 471      cttttgtagaattttagcatcgatagtgccatgttgactcccatattgttgacttcctc 529
                |||||||| ||||||||||| ||||||||||  ||||||||||  |  |||||||||||
Sbjct: 28272214 cttttgtaaaattttagcatggatagtgccacattgactcccaagtcattgacttcctc 28272272
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  133 bits (67), Expect = 7e-28
 Identities = 124/143 (86%)
 Strand = Plus / Plus

                                                                            
Query: 329      accaagaggattacaacggcacagacgccatgctgtcaagattgtacctttcgcgacacc 388
                |||||||||||||||| |||| |||||||| ||||||||||||||||| || || || ||
Sbjct: 28256534 accaagaggattacaatggcatagacgccaagctgtcaagattgtaccctttgcaacgcc 28256593

                                                                            
Query: 389      atatcttttgtacgcctgcatagagtaatcgctgcacgttggcacataacgacagcttga 448
                 ||| ||||||| || ||||||||||| | |||||| |||||||||||||| ||||||||
Sbjct: 28256594 gtattttttgtatgcttgcatagagtactggctgcaagttggcacataacggcagcttga 28256653

                                       
Query: 449      aggcagtaagggtgatatctctc 471
                 || |||||||| ||||| ||||
Sbjct: 28256654 gggtagtaagggcgatatttctc 28256676



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                    
Query: 268      gccatcattcctcaggtaactcttcctccctaaaccaccttggaggatcata 319
                ||||||||| ||  |||||||||||||| | |||||||||||| ||||||||
Sbjct: 28256369 gccatcattgctttggtaactcttcctcaccaaaccaccttgggggatcata 28256420



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 471      cttttgtagaattttagcatcgatagtgccatgttgactccca 513
                |||||||| ||||||||||| ||||||||||  ||||||||||
Sbjct: 28256792 cttttgtaaaattttagcatggatagtgccacattgactccca 28256834
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>gb|AC116778.9| Mus musculus chromosome 1, clone RP24-481H3, complete sequence
          Length = 132180

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 276   tcctcaggtaactcttcctccctaaa 301
             ||||||||||||| ||||||||||||
Sbjct: 98946 tcctcaggtaacttttcctccctaaa 98921
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>gb|AC158940.8| Mus musculus chromosome 1, clone RP24-284D7, complete sequence
          Length = 163660

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 276   tcctcaggtaactcttcctccctaaa 301
             ||||||||||||| ||||||||||||
Sbjct: 27445 tcctcaggtaacttttcctccctaaa 27420
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>emb|AL445213.11| Human DNA sequence from clone RP13-52K8 on chromosome X Contains a
              pseudogene similar to part of SLC9A2 (solute carrier family
              9 (sodium/hydrogen exchanger), isoform 2), complete
              sequence
          Length = 190604

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 441    cagcttgaaggcagtaagggtg 462
              ||||||||||||||||||||||
Sbjct: 130290 cagcttgaaggcagtaagggtg 130311
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>ref|XM_369473.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
           (MG05991.4) partial mRNA
          Length = 3234

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 275 ttcctcaggtaactcttcctc 295
           |||||||||||||||||||||
Sbjct: 867 ttcctcaggtaactcttcctc 847
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>gb|AC137529.3| Carollia perspicillata clone 6M17, complete sequence
          Length = 118381

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 155   catagtcaataaaatacactt 175
             |||||||||||||||||||||
Sbjct: 83460 catagtcaataaaatacactt 83440
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>gb|AC148317.3| Pan troglodytes BAC clone CH251-519K22 from chromosome 7, complete
             sequence
          Length = 154065

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 291   tcctccctaaaccaccttgga 311
             |||||||||||||||||||||
Sbjct: 79191 tcctccctaaaccaccttgga 79171
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>gb|AC158384.2| Mus musculus BAC clone RP24-97I24 from chromosome 9, complete sequence
          Length = 163817

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 55    agtggtccatggaaactgtac 75
             |||||||||||||||||||||
Sbjct: 98657 agtggtccatggaaactgtac 98637
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>gb|AC159231.2| Mus musculus BAC clone RP24-387F20 from chromosome 13, complete sequence
          Length = 150809

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 162    aataaaatacactttcccttg 182
              |||||||||||||||||||||
Sbjct: 137247 aataaaatacactttcccttg 137267
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>emb|CT009604.11| Mouse DNA sequence from clone RP23-4J22 on chromosome 13, complete
             sequence
          Length = 209356

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 162   aataaaatacactttcccttg 182
             |||||||||||||||||||||
Sbjct: 94438 aataaaatacactttcccttg 94418
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>gb|AC148461.2| Xenopus tropicalis clone CH216-3P14, complete sequence
          Length = 177929

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 469   ctcttttgtagaattttagcatcgatagt 497
             ||||||||||||||||||| ||| |||||
Sbjct: 90421 ctcttttgtagaattttagaatctatagt 90449
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>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold
          Length = 1501503

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 155    catagtcaataaaatacactt 175
              |||||||||||||||||||||
Sbjct: 531112 catagtcaataaaatacactt 531092
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>gb|AC093363.12| Mus musculus chromosome 7, clone RP23-60O3, complete sequence
          Length = 254081

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 255   cattccaacatcagccatcattcc 278
             |||||| |||||||||||||||||
Sbjct: 60442 cattcctacatcagccatcattcc 60419
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>ref|XM_456339.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0A00297g)
            partial mRNA
          Length = 1962

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 160  tcaataaaatacactttcccttga 183
            |||||||||||||| |||||||||
Sbjct: 1829 tcaataaaatacaccttcccttga 1806
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>ref|XM_456964.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0A14982g)
           partial mRNA
          Length = 279

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 160 tcaataaaatacactttcccttga 183
           |||||||||||||| |||||||||
Sbjct: 146 tcaataaaatacacattcccttga 123
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>gb|AC145805.2| Xenopus tropicalis clone CH216-85O8, complete sequence
          Length = 166207

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    aactagcacaagcagtagta 203
              ||||||||||||||||||||
Sbjct: 121972 aactagcacaagcagtagta 121991
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>gb|AF198031.1| Mus musculus enamel matrix serine proteinase 1 precursor (Prss17)
           gene, complete cds
          Length = 10134

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 265 tcagccatcattcctcaggt 284
           ||||||||||||||||||||
Sbjct: 106 tcagccatcattcctcaggt 87
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>gb|AC134858.6| Mus musculus BAC clone RP23-361A18 from chromosome 7, complete sequence
          Length = 214282

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   tcagccatcattcctcaggt 284
             ||||||||||||||||||||
Sbjct: 68936 tcagccatcattcctcaggt 68917
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>emb|AL731559.8| Human DNA sequence from clone RP11-495F22 on chromosome 10 Contains part
              of the gene for CamKI-like protein kinase (CKLiK)
              (LOC221042 LOC283070), complete sequence
          Length = 196320

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 289    cttcctccctaaaccacctt 308
              ||||||||||||||||||||
Sbjct: 171959 cttcctccctaaaccacctt 171940
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>emb|AL391260.13| Human DNA sequence from clone RP11-328B14 on chromosome 10, complete
             sequence
          Length = 172771

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   agtcaataaaatacactttc 177
             ||||||||||||||||||||
Sbjct: 48538 agtcaataaaatacactttc 48557
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>emb|AL356010.9| Human DNA sequence from clone RP11-136B18 on chromosome 1 Contains a
             pseudogene similar to part of POM (POM121 homolog, rat)
             and ZP3 fusion (POMZP3), a novel gene and a CpG island,
             complete sequence
          Length = 151182

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    tacagaagtgctttagtggt 60
             ||||||||||||||||||||
Sbjct: 99843 tacagaagtgctttagtggt 99824
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>emb|AL158050.8| Human DNA sequence from clone RP3-437C15 on chromosome 6 Contains a
              Wilms' tumour 1-associating protein (WTAP) (KIAA0105)
              pseudogene, complete sequence
          Length = 149679

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 208    ggagtaacctcctttatgag 227
              ||||||||||||||||||||
Sbjct: 126598 ggagtaacctcctttatgag 126617
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>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces
               hansenii
          Length = 1249565

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 160     tcaataaaatacactttcccttga 183
               |||||||||||||| |||||||||
Sbjct: 1232901 tcaataaaatacacattcccttga 1232878



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 160  tcaataaaatacactttcccttga 183
            |||||||||||||| |||||||||
Sbjct: 9393 tcaataaaatacaccttcccttga 9416
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>emb|BX572635.17| Zebrafish DNA sequence from clone CH211-235O23 in linkage group 2,
              complete sequence
          Length = 124717

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 498    gccatgttgactcccatattgttg 521
              |||||||||||| |||||||||||
Sbjct: 113832 gccatgttgacttccatattgttg 113855
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>gb|AC106865.4| Homo sapiens BAC clone RP11-153M7 from 4, complete sequence
          Length = 152118

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   aataaaatacactttccctt 181
             ||||||||||||||||||||
Sbjct: 78727 aataaaatacactttccctt 78708
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>gb|AC011390.3| Homo sapiens chromosome 5 clone CTB-176I15, complete sequence
          Length = 56173

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 440   acagcttgaaggcagtaagg 459
             ||||||||||||||||||||
Sbjct: 11210 acagcttgaaggcagtaagg 11191
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>gb|AC018719.4| Homo sapiens BAC clone RP11-573N21 from Xq23, complete sequence
          Length = 168210

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   acagcatagtcaataaaata 170
             ||||||||||||||||||||
Sbjct: 56234 acagcatagtcaataaaata 56215
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>gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold
          Length = 501879

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 153    agcatagtcaataaaatacacttt 176
              |||||||||||||||||| |||||
Sbjct: 151907 agcatagtcaataaaatatacttt 151930
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>gb|AC016568.5| Homo sapiens chromosome 5 clone CTC-566C5, complete sequence
          Length = 220932

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 505   tgactcccatattgttgacttcct 528
             ||||||||||||| ||||||||||
Sbjct: 58334 tgactcccatatttttgacttcct 58311
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>gb|AC091971.4| Homo sapiens chromosome 5 clone RP11-511F22, complete sequence
          Length = 70759

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 440  acagcttgaaggcagtaagg 459
            ||||||||||||||||||||
Sbjct: 7472 acagcttgaaggcagtaagg 7491
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>emb|AJ243213.1|HSA243213 Homo sapiens partial 5-HT4 receptor gene, exons 2 to 5
          Length = 130985

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 440   acagcttgaaggcagtaagg 459
             ||||||||||||||||||||
Sbjct: 38431 acagcttgaaggcagtaagg 38450


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,738,576
Number of Sequences: 3902068
Number of extensions: 4738576
Number of successful extensions: 79866
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79676
Number of HSP's gapped (non-prelim): 188
length of query: 597
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 574
effective length of database: 17,143,297,704
effective search space: 9840252882096
effective search space used: 9840252882096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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