ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63l05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL353595.9| Human DNA sequence from clone RP11-81P8 on chrom... 50 0.011
2gb|AC127690.4| Mus musculus BAC clone RP24-215A3 from chromosome... 46 0.18
3gb|AC016583.8| Homo sapiens chromosome 5 clone CTD-2591A1, compl... 46 0.18
4gb|AC091888.3| Homo sapiens chromosome 5 clone RP11-11K15, compl... 46 0.18
5gb|AC008928.6|AC008928 Homo sapiens chromosome 5 clone CTD-2288H... 46 0.18
6gb|AC102856.5| Mus musculus chromosome 8, clone RP24-500H8, comp... 44 0.69
7gb|AY253170.1| Haemulon flavolineatum microsatellite HfAAT3 sequ... 44 0.69
8gb|AC145770.1| Pan troglodytes BAC clone CH251-576K13 from Y, co... 44 0.69
9emb|AL691465.4| Human DNA sequence from clone RP11-98D9 on chrom... 44 0.69
10emb|AL359649.8| Human DNA sequence from clone RP11-65D24 on chro... 44 0.69
11emb|AL353739.4| Human DNA sequence from clone RP11-19D15 on chro... 44 0.69
12emb|AL109800.25|HSDA64P14 Human DNA sequence from clone RP6-64P1... 44 0.69
13gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome 44 0.69
14emb|CR856017.2| Human DNA sequence from clone WI2-85805H8 on chr... 44 0.69
15dbj|BS000576.2| Pan troglodytes chromosome Y clone:PTB-045N05, c... 44 0.69
16gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 44 0.69
17gb|AC013412.3|AC013412 Homo sapiens BAC clone RP11-507A3 from Y,... 44 0.69
18emb|AL845524.5| Mouse DNA sequence from clone RP23-248D22 on chr... 44 0.69
19gb|AC008601.7| Homo sapiens chromosome 5 clone CTB-105L4, comple... 44 0.69
20gb|AC123761.17| Mus musculus chromosome 3, clone RP24-331E24, co... 42 2.7
21gb|AC107811.28| Mus musculus chromosome 3, clone RP23-69D10, com... 42 2.7
22gb|L23645.1| Caenorhabditis elegans cosmid F54F2, complete sequence 42 2.7
23gb|AC112898.5| Rattus norvegicus 2 BAC CH230-157M2 (Children's H... 42 2.7
24ref|NM_018945.3| Homo sapiens phosphodiesterase 7B (PDE7B), mRNA 42 2.7
25gb|AC165168.3| Mus musculus BAC clone RP23-12D3 from chromosome ... 42 2.7
26gb|AC158547.7| Mus musculus chromosome 3, clone RP23-477L20, com... 42 2.7
27gb|AC125375.3| Mus musculus BAC clone RP23-464K21 from chromosom... 42 2.7
28gb|AC127289.4| Mus musculus BAC clone RP23-359O14 from chromosom... 42 2.7
29gb|AC122274.4| Mus musculus BAC clone RP23-228J3 from 14, comple... 42 2.7
30gb|AC146202.3| Pan troglodytes BAC clone RP43-35A11 from 7, comp... 42 2.7
31gb|AC183295.3| Pan troglodytes BAC clone CH251-342J24 from chrom... 42 2.7
32emb|AL138828.15| Human DNA sequence from clone RP11-472E5 on chr... 42 2.7
33emb|AL050308.9|HSG164F24 Human DNA sequence from clone GS1-164F2... 42 2.7
34emb|CR759947.5| Gorilla DNA sequence from clone CH255-315F17, co... 42 2.7
35gb|AC114496.2| Homo sapiens chromosome 1 clone RP11-504B1, compl... 42 2.7
36gb|AC183604.3| Pan troglodytes BAC clone CH251-346L15 from chrom... 42 2.7
37gb|AC183284.3| Pan troglodytes BAC clone CH251-413D13 from chrom... 42 2.7
38gb|AC182465.2| Pan troglodytes BAC clone CH251-502A24 from chrom... 42 2.7
39gb|AC112250.4| Homo sapiens BAC clone RP11-710E1 from 4, complet... 42 2.7
40gb|AC104460.2| Homo sapiens chromosome 1 clone RP11-438O11, comp... 42 2.7
41gb|AC004980.5| Homo sapiens PAC clone RP5-1158B1 from 7q11.2-q22... 42 2.7
42dbj|AB209990.1| Homo sapiens mRNA for PDE7B variant protein, par... 42 2.7
43gb|AC008746.10| Homo sapiens chromosome 19 clone CTD-2587H19, co... 42 2.7
44gb|AF289667.1|AF289667 Mus musculus GTF2IRD1 and CYLN2 genes, co... 42 2.7
45dbj|BS000101.1| Pan troglodytes chromosome 22 clone:PTB-115B20, ... 42 2.7
46gb|AC122547.11| Mus musculus chromosome 1, clone RP23-76P20, com... 42 2.7
47dbj|AP001692.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 2.7
48dbj|AP000233.2| Homo sapiens genomic DNA, chromosome 21q, clone:... 42 2.7
49gb|AC167419.4| Mus musculus BAC clone RP24-359H20 from chromosom... 42 2.7
50gb|AC171624.5| Mus musculus chromosome 3, clone RP24-136H19, com... 42 2.7
51emb|AL928538.5| Mouse DNA sequence from clone RP23-102P12 on chr... 42 2.7
52dbj|AP000147.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL... 42 2.7 
>emb|AL353595.9| Human DNA sequence from clone RP11-81P8 on chromosome 9, complete
              sequence
          Length = 167629

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 78     aaaacaataacagcaacaagaaaacaata 106
              ||||||||||||||||||| |||||||||
Sbjct: 137514 aaaacaataacagcaacaacaaaacaata 137542
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>gb|AC127690.4| Mus musculus BAC clone RP24-215A3 from chromosome 17, complete sequence
          Length = 187751

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 78    aaaacaataacagcaacaagaaaacaa 104
             ||||||||||||||||||| |||||||
Sbjct: 95510 aaaacaataacagcaacaacaaaacaa 95484
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>gb|AC016583.8| Homo sapiens chromosome 5 clone CTD-2591A1, complete sequence
          Length = 184769

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 232   atggccaacttcaagccattatt 254
             |||||||||||||||||||||||
Sbjct: 18457 atggccaacttcaagccattatt 18435
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>gb|AC091888.3| Homo sapiens chromosome 5 clone RP11-11K15, complete sequence
          Length = 151453

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 232    atggccaacttcaagccattatt 254
              |||||||||||||||||||||||
Sbjct: 142707 atggccaacttcaagccattatt 142685
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>gb|AC008928.6|AC008928 Homo sapiens chromosome 5 clone CTD-2288H1, complete sequence
          Length = 110297

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 232   atggccaacttcaagccattatt 254
             |||||||||||||||||||||||
Sbjct: 25700 atggccaacttcaagccattatt 25722
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>gb|AC102856.5| Mus musculus chromosome 8, clone RP24-500H8, complete sequence
          Length = 195286

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 78     aaaacaataacagcaacaagaa 99
              ||||||||||||||||||||||
Sbjct: 164167 aaaacaataacagcaacaagaa 164146
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>gb|AY253170.1| Haemulon flavolineatum microsatellite HfAAT3 sequence
          Length = 412

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 78  aaaacaataacagcaacaagaaaaca 103
           |||||||||||||||||| |||||||
Sbjct: 267 aaaacaataacagcaacatgaaaaca 242
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>gb|AC145770.1| Pan troglodytes BAC clone CH251-576K13 from Y, complete sequence
          Length = 177726

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 76    tcaaaacaataacagcaacaagaaaa 101
             ||||||||| ||||||||||||||||
Sbjct: 66071 tcaaaacaacaacagcaacaagaaaa 66096
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>emb|AL691465.4| Human DNA sequence from clone RP11-98D9 on chromosome 1, complete
             sequence
          Length = 51305

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 72    cagatcaaaacaataacagcaacaagaaaa 101
             |||| |||||||||||||||||||| ||||
Sbjct: 11524 cagaccaaaacaataacagcaacaacaaaa 11553
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>emb|AL359649.8| Human DNA sequence from clone RP11-65D24 on chromosome 13 Contains 2
             novel genes, complete sequence
          Length = 144792

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 553   gcttcttcagtaagaagcacag 574
             ||||||||||||||||||||||
Sbjct: 92961 gcttcttcagtaagaagcacag 92982
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>emb|AL353739.4| Human DNA sequence from clone RP11-19D15 on chromosome 20 Contains STSs
             and GSSs, complete sequence
          Length = 101388

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 76    tcaaaacaataacagcaacaagaaaa 101
             ||||||||||||||||||||| ||||
Sbjct: 16824 tcaaaacaataacagcaacaacaaaa 16799
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>emb|AL109800.25|HSDA64P14 Human DNA sequence from clone RP6-64P14 on chromosome Xq24-25, complete
             sequence
          Length = 163764

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 355   taggtgggttccaaataatactttgc 380
             ||||||||| ||||||||||||||||
Sbjct: 55265 taggtgggtaccaaataatactttgc 55290
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>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 274     ttggacaggttgaaacaagtca 295
               ||||||||||||||||||||||
Sbjct: 3658818 ttggacaggttgaaacaagtca 3658797
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>emb|CR856017.2| Human DNA sequence from clone WI2-85805H8 on chromosome X, complete
             sequence
          Length = 39781

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 80    aacaataacagcaacaagaaaa 101
             ||||||||||||||||||||||
Sbjct: 38590 aacaataacagcaacaagaaaa 38611
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>dbj|BS000576.2| Pan troglodytes chromosome Y clone:PTB-045N05, complete sequences
          Length = 190089

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 76    tcaaaacaataacagcaacaagaaaa 101
             ||||||||| ||||||||||||||||
Sbjct: 71156 tcaaaacaacaacagcaacaagaaaa 71181
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 76       tcaaaacaataacagcaacaagaaaa 101
                ||||||||| ||||||||||||||||
Sbjct: 23447121 tcaaaacaacaacagcaacaagaaaa 23447096
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>gb|AC013412.3|AC013412 Homo sapiens BAC clone RP11-507A3 from Y, complete sequence
          Length = 200214

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 76     tcaaaacaataacagcaacaagaaaa 101
              ||||||||| ||||||||||||||||
Sbjct: 144119 tcaaaacaacaacagcaacaagaaaa 144144
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>emb|AL845524.5| Mouse DNA sequence from clone RP23-248D22 on chromosome 2, complete
             sequence
          Length = 174188

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 387   gttgaatttcaaacagaaatgg 408
             ||||||||||||||||||||||
Sbjct: 48152 gttgaatttcaaacagaaatgg 48131
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>gb|AC008601.7| Homo sapiens chromosome 5 clone CTB-105L4, complete sequence
          Length = 106641

 Score = 44.1 bits (22), Expect = 0.69
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 76   tcaaaacaataacagcaacaagaaaa 101
            ||||||||||||||||||||| ||||
Sbjct: 7627 tcaaaacaataacagcaacaaaaaaa 7602
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>gb|AC123761.17| Mus musculus chromosome 3, clone RP24-331E24, complete sequence
          Length = 192157

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 76    tcaaaacaataacagcaacaagaaaacaa 104
             ||||||||| ||||||||||| |||||||
Sbjct: 51022 tcaaaacaacaacagcaacaacaaaacaa 51050
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>gb|AC107811.28| Mus musculus chromosome 3, clone RP23-69D10, complete sequence
          Length = 166255

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 76    tcaaaacaataacagcaacaagaaaacaa 104
             ||||||||| ||||||||||| |||||||
Sbjct: 25602 tcaaaacaacaacagcaacaacaaaacaa 25574
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>gb|L23645.1| Caenorhabditis elegans cosmid F54F2, complete sequence
          Length = 39573

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 31   tcctcaaagcttaaaaatcca 51
            |||||||||||||||||||||
Sbjct: 2013 tcctcaaagcttaaaaatcca 1993
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>gb|AC112898.5| Rattus norvegicus 2 BAC CH230-157M2 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 213379

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 30     ctcctcaaagcttaaaaatcc 50
              |||||||||||||||||||||
Sbjct: 193559 ctcctcaaagcttaaaaatcc 193539
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>ref|NM_018945.3| Homo sapiens phosphodiesterase 7B (PDE7B), mRNA
          Length = 5387

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 479  ctatgtgtaccatcaaaccaa 499
            |||||||||||||||||||||
Sbjct: 3942 ctatgtgtaccatcaaaccaa 3922
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>gb|AC165168.3| Mus musculus BAC clone RP23-12D3 from chromosome 19, complete sequence
          Length = 215151

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 77     caaaacaataacagcaacaagaaaacaat 105
              |||||||| ||||||||||| ||||||||
Sbjct: 119022 caaaacaacaacagcaacaacaaaacaat 119050
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>gb|AC158547.7| Mus musculus chromosome 3, clone RP23-477L20, complete sequence
          Length = 182793

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 80     aacaataacagcaacaagaaaacaa 104
              ||||||||||||||||| |||||||
Sbjct: 138919 aacaataacagcaacaacaaaacaa 138943
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>gb|AC125375.3| Mus musculus BAC clone RP23-464K21 from chromosome 14, complete sequence
          Length = 198193

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 77     caaaacaataacagcaacaagaaaacaat 105
              ||||||||||||| |||||| ||||||||
Sbjct: 178629 caaaacaataacaacaacaacaaaacaat 178657
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>gb|AC127289.4| Mus musculus BAC clone RP23-359O14 from chromosome 19, complete sequence
          Length = 203047

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 77     caaaacaataacagcaacaagaaaacaat 105
              |||||||| ||||||||||| ||||||||
Sbjct: 196908 caaaacaacaacagcaacaacaaaacaat 196936
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>gb|AC122274.4| Mus musculus BAC clone RP23-228J3 from 14, complete sequence
          Length = 192135

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 77    caaaacaataacagcaacaagaaaacaat 105
             ||||||||||||| |||||| ||||||||
Sbjct: 60529 caaaacaataacaacaacaacaaaacaat 60501
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>gb|AC146202.3| Pan troglodytes BAC clone RP43-35A11 from 7, complete sequence
          Length = 161532

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 72    cagatcaaaacaataacagcaacaa 96
             |||| ||||||||||||||||||||
Sbjct: 30207 cagaccaaaacaataacagcaacaa 30231
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>gb|AC183295.3| Pan troglodytes BAC clone CH251-342J24 from chromosome 7, complete
             sequence
          Length = 183374

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 72    cagatcaaaacaataacagcaacaa 96
             |||| ||||||||||||||||||||
Sbjct: 31527 cagaccaaaacaataacagcaacaa 31503
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>emb|AL138828.15| Human DNA sequence from clone RP11-472E5 on chromosome 6 Contains the
             3' end of the PDE7B gene for phosphodiesterase 7B, the 5'
             end of a novel gene and the 3' end of a novel gene,
             complete sequence
          Length = 141540

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 479   ctatgtgtaccatcaaaccaa 499
             |||||||||||||||||||||
Sbjct: 92760 ctatgtgtaccatcaaaccaa 92740
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>emb|AL050308.9|HSG164F24 Human DNA sequence from clone GS1-164F24 on chromosome Xq26.3-27.3
              Contains a NADH dehydrogenase (ubiquinone) 1 beta
              subcomplex, 3 (12kD, B12) (NDUFB3) pseudogene and part of a
              novel gene, complete sequence
          Length = 213084

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 79     aaacaataacagcaacaagaaaaca 103
              |||||||||||||||||| ||||||
Sbjct: 189891 aaacaataacagcaacaacaaaaca 189867
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>emb|CR759947.5| Gorilla DNA sequence from clone CH255-315F17, complete sequence
          Length = 97153

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 80    aacaataacagcaacaagaaaacaa 104
             ||||| |||||||||||||||||||
Sbjct: 19239 aacaacaacagcaacaagaaaacaa 19263
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>gb|AC114496.2| Homo sapiens chromosome 1 clone RP11-504B1, complete sequence
          Length = 186551

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 79     aaacaataacagcaacaagaa 99
              |||||||||||||||||||||
Sbjct: 140401 aaacaataacagcaacaagaa 140381
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>gb|AC183604.3| Pan troglodytes BAC clone CH251-346L15 from chromosome 1, complete
             sequence
          Length = 143809

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 72    cagatcaaaacaataacagcaacaa 96
             |||| ||||||||||||||||||||
Sbjct: 73418 cagaccaaaacaataacagcaacaa 73442
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>gb|AC183284.3| Pan troglodytes BAC clone CH251-413D13 from chromosome 7, complete
             sequence
          Length = 171441

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 72    cagatcaaaacaataacagcaacaa 96
             |||| ||||||||||||||||||||
Sbjct: 82884 cagaccaaaacaataacagcaacaa 82860
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>gb|AC182465.2| Pan troglodytes BAC clone CH251-502A24 from chromosome 1, complete
              sequence
          Length = 158746

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 72     cagatcaaaacaataacagcaacaa 96
              |||| ||||||||||||||||||||
Sbjct: 110810 cagaccaaaacaataacagcaacaa 110834
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>gb|AC112250.4| Homo sapiens BAC clone RP11-710E1 from 4, complete sequence
          Length = 79475

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 77    caaaacaataacagcaacaag 97
             |||||||||||||||||||||
Sbjct: 59824 caaaacaataacagcaacaag 59844
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>gb|AC104460.2| Homo sapiens chromosome 1 clone RP11-438O11, complete sequence
          Length = 162514

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 77    caaaacaataacagcaacaagaaaa 101
             |||||||||||||||||||| ||||
Sbjct: 64903 caaaacaataacagcaacaacaaaa 64927
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>gb|AC004980.5| Homo sapiens PAC clone RP5-1158B1 from 7q11.2-q22, complete sequence
          Length = 213740

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 72     cagatcaaaacaataacagcaacaa 96
              |||| ||||||||||||||||||||
Sbjct: 169428 cagaccaaaacaataacagcaacaa 169452
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>dbj|AB209990.1| Homo sapiens mRNA for PDE7B variant protein, partial cds, clone:
            ah00907
          Length = 5493

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 479  ctatgtgtaccatcaaaccaa 499
            |||||||||||||||||||||
Sbjct: 4048 ctatgtgtaccatcaaaccaa 4028
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>gb|AC008746.10| Homo sapiens chromosome 19 clone CTD-2587H19, complete sequence
          Length = 200070

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 80     aacaataacagcaacaagaaaacaa 104
              ||||| |||||||||||||||||||
Sbjct: 123636 aacaacaacagcaacaagaaaacaa 123660
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>gb|AF289667.1|AF289667 Mus musculus GTF2IRD1 and CYLN2 genes, complete cds
          Length = 201605

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 73    agatcaaaacaataacagcaacaagaaaa 101
             ||||||||||||||||| |||||| ||||
Sbjct: 74326 agatcaaaacaataacaacaacaacaaaa 74298
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>dbj|BS000101.1| Pan troglodytes chromosome 22 clone:PTB-115B20, map 22, complete
             sequences
          Length = 191901

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 83    aataacagcaacaagaaaaca 103
             |||||||||||||||||||||
Sbjct: 30223 aataacagcaacaagaaaaca 30243
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>gb|AC122547.11| Mus musculus chromosome 1, clone RP23-76P20, complete sequence
          Length = 232651

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 77    caaaacaataacagcaacaagaaaa 101
             |||||||||||||||||||| ||||
Sbjct: 74235 caaaacaataacagcaacaacaaaa 74259
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>dbj|AP001692.1| Homo sapiens genomic DNA, chromosome 21q, section 36/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 83     aataacagcaacaagaaaaca 103
              |||||||||||||||||||||
Sbjct: 219421 aataacagcaacaagaaaaca 219441
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>dbj|AP000233.2| Homo sapiens genomic DNA, chromosome 21q, clone:RP1-655M9, complete
             sequence
          Length = 89086

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 83    aataacagcaacaagaaaaca 103
             |||||||||||||||||||||
Sbjct: 49973 aataacagcaacaagaaaaca 49993
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>gb|AC167419.4| Mus musculus BAC clone RP24-359H20 from chromosome 5, complete sequence
          Length = 179790

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 73     agatcaaaacaataacagcaacaagaaaa 101
              ||||||||||||||||| |||||| ||||
Sbjct: 115131 agatcaaaacaataacaacaacaacaaaa 115103
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>gb|AC171624.5| Mus musculus chromosome 3, clone RP24-136H19, complete sequence
          Length = 114706

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 80    aacaataacagcaacaagaaaacaa 104
             |||||||||| ||||||||||||||
Sbjct: 59432 aacaataacaacaacaagaaaacaa 59456
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>emb|AL928538.5| Mouse DNA sequence from clone RP23-102P12 on chromosome X, complete
             sequence
          Length = 140604

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 78    aaaacaataacagcaacaagaaaacaata 106
             ||||| ||||||||||||| |||||||||
Sbjct: 30101 aaaaccataacagcaacaaaaaaacaata 30073
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>dbj|AP000147.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region, clone
             f78H10-B2333F11, segment 1/2, complete sequence
          Length = 100000

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 83    aataacagcaacaagaaaaca 103
             |||||||||||||||||||||
Sbjct: 64384 aataacagcaacaagaaaaca 64364


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,016,295
Number of Sequences: 3902068
Number of extensions: 8016295
Number of successful extensions: 167776
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 167600
Number of HSP's gapped (non-prelim): 176
length of query: 789
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 766
effective length of database: 17,143,297,704
effective search space: 13131766041264
effective search space used: 13131766041264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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