Clone Name | rbah63l02 |
---|---|
Clone Library Name | barley_pub |
>P2SAF_ARATH (O82660) Photosystem II stability/assembly factor HCF136,| chloroplast precursor Length = 403 Score = 149 bits (377), Expect = 3e-36 Identities = 69/88 (78%), Positives = 79/88 (89%) Frame = -2 Query: 472 GTGIVEDFEEASVQSRGFGILDVGYRSKDEAWAAGGSGVLLKTTNGGKTWVRDRAADNIP 293 GTGI E+FEE VQSRGFGILDVGYRS++EAWAAGGSG+LL+T NGGK+W RD+AADNI Sbjct: 316 GTGITEEFEEVPVQSRGFGILDVGYRSEEEAWAAGGSGILLRTRNGGKSWNRDKAADNIA 375 Query: 292 GNLYSVKFIGDNQGFVLGNDGVLLRYVG 209 NLY+VKF+ D +GFVLGNDGVLLRYVG Sbjct: 376 ANLYAVKFVDDKKGFVLGNDGVLLRYVG 403 Score = 36.2 bits (82), Expect = 0.044 Identities = 19/72 (26%), Positives = 36/72 (50%) Frame = -2 Query: 406 VGYRSKDEAWAAGGSGVLLKTTNGGKTWVRDRAADNIPGNLYSVKFIGDNQGFVLGNDGV 227 + ++ K E W G +LL T + G+ W R + +PG++ +K D ++ ++G Sbjct: 150 ISFKGK-EGWIIGKPAILLYTADAGENWDRIPLSSQLPGDMVFIKATEDKSAEMVTDEGA 208 Query: 226 LLRYVG*SSGKN 191 + YV + G N Sbjct: 209 I--YVTSNRGYN 218
>YC48L_SYNY3 (P73069) Ycf48-like protein| Length = 342 Score = 84.0 bits (206), Expect = 2e-16 Identities = 36/74 (48%), Positives = 53/74 (71%), Gaps = 1/74 (1%) Frame = -2 Query: 433 QSRG-FGILDVGYRSKDEAWAAGGSGVLLKTTNGGKTWVRDRAADNIPGNLYSVKFIGDN 257 Q +G +G+LD+ +R+ +E W AG SG LL + +GG+TW +D ++IP NLY V F+ Sbjct: 259 QDKGSWGLLDLSFRTPEEVWVAGASGNLLMSQDGGQTWAKDTGVEDIPANLYRVVFLSPE 318 Query: 256 QGFVLGNDGVLLRY 215 +GFVLG DG+LL+Y Sbjct: 319 KGFVLGQDGILLKY 332 Score = 45.1 bits (105), Expect = 1e-04 Identities = 23/68 (33%), Positives = 37/68 (54%) Frame = -2 Query: 394 SKDEAWAAGGSGVLLKTTNGGKTWVRDRAADNIPGNLYSVKFIGDNQGFVLGNDGVLLRY 215 S +E W G +LL TT+GG+TW R ++ +PG YS+ +G ++ + G + Y Sbjct: 102 SGNEGWITGKPSILLHTTDGGQTWARIPLSEKLPGAPYSIIALGPQTAEMITDLGAI--Y 159 Query: 214 VG*SSGKN 191 + GKN Sbjct: 160 KTTNGGKN 167 Score = 30.8 bits (68), Expect = 1.9 Identities = 14/56 (25%), Positives = 24/56 (42%) Frame = -2 Query: 388 DEAWAAGGSGVLLKTTNGGKTWVRDRAADNIPGNLYSVKFIGDNQGFVLGNDGVLL 221 + W G + +TT+GG TW + +S N+G++ G +LL Sbjct: 61 NHGWLVGTKETIFETTDGGDTWEQKLIDLGEEKASFSAVSFSGNEGWITGKPSILL 116
>YCF48_CYAPA (P48325) Hypothetical 37.3 kDa protein ycf48 (ORF333)| Length = 333 Score = 82.8 bits (203), Expect = 4e-16 Identities = 34/71 (47%), Positives = 48/71 (67%) Frame = -2 Query: 424 GFGILDVGYRSKDEAWAAGGSGVLLKTTNGGKTWVRDRAADNIPGNLYSVKFIGDNQGFV 245 G G+L++ +++ E W +GGSG+LL + + G TW ++ + DNIP N Y + FI GFV Sbjct: 261 GLGLLNLAFKTPTEIWVSGGSGILLSSQDTGNTWKKETSTDNIPSNFYKISFIDKEVGFV 320 Query: 244 LGNDGVLLRYV 212 LGN G LLRYV Sbjct: 321 LGNQGTLLRYV 331 Score = 37.7 bits (86), Expect = 0.015 Identities = 17/59 (28%), Positives = 30/59 (50%) Frame = -2 Query: 394 SKDEAWAAGGSGVLLKTTNGGKTWVRDRAADNIPGNLYSVKFIGDNQGFVLGNDGVLLR 218 S E W G +LL TT+GG +W R ++ +PG+ + +G + + + G + R Sbjct: 96 SGKEGWVTGKPAILLHTTDGGSSWSRIPLSNQLPGDPALITALGTGKAELATDIGAIYR 154
>P2SAF_POPEU (P84561) Photosystem II stability/assembly factor (Fragment)| Length = 26 Score = 48.9 bits (115), Expect = 7e-06 Identities = 22/26 (84%), Positives = 23/26 (88%) Frame = -2 Query: 472 GTGIVEDFEEASVQSRGFGILDVGYR 395 GTGI E+FEE VQSRGFGILDVGYR Sbjct: 1 GTGITEEFEEVPVQSRGFGILDVGYR 26
>DMI1L_ORYSA (Q75LD5) Putative ion channel DMI1-like, chloroplast precursor| Length = 893 Score = 34.7 bits (78), Expect = 0.13 Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 5/85 (5%) Frame = +3 Query: 189 WFFPLLQP---TYRSKTPS--FPSTKPWLSPMNFTE*RFPGMLSAALSRTQVLPPLVVFS 353 WFFP P + R++TP FPST +P +F + R P P S Sbjct: 16 WFFPPAPPFLPSSRARTPRAPFPSTSRSSNPYSFPDRRPP-------------PTPRSRS 62 Query: 354 RTPLPPAAHASSFER*PTSRIPNPR 428 R+PLPP + PT+ P PR Sbjct: 63 RSPLPPPEQQKQQQPPPTTPPPAPR 87
>PKHA4_MOUSE (Q8VC98) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 588 Score = 32.3 bits (72), Expect = 0.64 Identities = 37/108 (34%), Positives = 47/108 (43%), Gaps = 18/108 (16%) Frame = +3 Query: 192 FFPLLQPTYRSKTP---SFPSTKPWLSPMNFTE*RFPGMLSAALSRTQVLPPL------V 344 F PL +P P S P+ +P P++ + FP LSR V PPL Sbjct: 233 FSPLSRPPSPLSLPRPRSAPARRP---PLSAGDISFPARPHTPLSRIDVRPPLDWGPQRQ 289 Query: 345 VFSRTPLP---PAAHASSFER*PTSRIPNPRL------CTDASSKSST 461 SR P+P P++ A ER P R P PR T A+S SST Sbjct: 290 TLSRPPIPRRGPSSEAGG-ERPP--RSPQPRTPEQRTQSTQATSGSST 334
>STP2_BOVIN (P26377) Nuclear transition protein 2 (TP-2) (TP2)| Length = 131 Score = 31.6 bits (70), Expect = 1.1 Identities = 21/53 (39%), Positives = 23/53 (43%) Frame = +1 Query: 289 SQGCYRQPCRAPRSCRHWLFSAGRRSHRLPTPHPLSGSPRPEFQTPGFVPTLP 447 SQ C Q RSCR S RSHR PT H P+P + P LP Sbjct: 32 SQHC--QSRSRSRSCRSRSSSRRPRSHRSPTGHQGRARPQPSSEAPQTHHALP 82
>NQRB_VIBAL (Q56587) Na(+)-translocating NADH-quinone reductase subunit B (EC| 1.6.5.-) (Na(+)-translocating NQR subunit B) (Na(+)-NQR subunit B) (NQR complex subunit B) (NQR-1 subunit B) Length = 413 Score = 31.2 bits (69), Expect = 1.4 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -2 Query: 379 WAAGGSGVLLKTTNGGKTWVRDRAADNIPGNLYSV 275 WA GG+G L+ T G D NIPG++ V Sbjct: 240 WAQGGNGALVNTVTGSPITWMDAFIGNIPGSIGEV 274
>VMAT2_BOVIN (Q27963) Synaptic vesicular amine transporter (Monoamine| transporter) (Vesicular amine transporter 2) (VAT2) (Solute carrier family 18 member 2) Length = 517 Score = 31.2 bits (69), Expect = 1.4 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%) Frame = +2 Query: 122 ISSLSHVRLYMDHYIQKRVCIAVVFSATSANVSEQDAVVPEHKTLVVPNELYGVEVPRDV 301 +S L+ +R + +++ + +VF A + VVP ++P+ LY +E +D Sbjct: 3 LSELALLRRLQESRHSRKLILFIVFLALLLDNMLLTVVVP-----IIPSYLYSIEHEKDA 57 Query: 302 IGSPVAHPGL--AAIGCFQ 352 + A PGL +A G FQ Sbjct: 58 LEIQTAKPGLTASAPGSFQ 76
>SEH1_YEAST (P53011) Nucleoporin SEH1 (Nuclear pore protein SEH1) (SEC13| homolog 1) Length = 349 Score = 30.8 bits (68), Expect = 1.9 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%) Frame = -2 Query: 334 GKTWVRDRAADNIPGNLYSVKFIGDNQGF---VLGNDGVLLRY 215 G+ W + ++ G+LYSVKF + G LGNDG+L Y Sbjct: 95 GRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLY 137
>NQRB_VIBAN (Q75R63) Na(+)-translocating NADH-quinone reductase subunit B (EC| 1.6.5.-) (Na(+)-translocating NQR subunit B) (Na(+)-NQR subunit B) (NQR complex subunit B) (NQR-1 subunit B) Length = 414 Score = 30.4 bits (67), Expect = 2.4 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = -2 Query: 379 WAAGGSGVLL-KTTNGGKTWVRDRAADNIPGNLYSVKFIGDNQGFVLGNDGVLLRYVG*S 203 WA GG+G L+ K T TW+ D NIPG+ IG+ L + Y+G + Sbjct: 241 WAQGGNGALINKVTGEAITWM-DAFVGNIPGS------IGEVSTLALAIGAAFIVYMGIA 293 Query: 202 S 200 S Sbjct: 294 S 294
>ST18_HUMAN (O60284) Suppression of tumorigenicity protein 18 (Zinc finger| protein 387) Length = 1047 Score = 30.0 bits (66), Expect = 3.2 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = +3 Query: 198 PLLQPTYRSKTPSFPSTKPWLSPMNFTE*RFPGMLSAALSRTQ 326 PL+Q KTP FP +K + +P+ +FP L +A + TQ Sbjct: 516 PLIQTVQGRKTPPFPESKHFPNPV-----KFPNRLPSAGAHTQ 553
>CSF1_RAT (Q8JZQ0) Macrophage colony-stimulating factor 1 precursor (CSF-1)| (MCSF) Length = 566 Score = 30.0 bits (66), Expect = 3.2 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +1 Query: 316 RAPRSCRHWLFSAGRRSHRLPTPHPLSGSPRP 411 R PRS L S + +H P PHP +G+P P Sbjct: 251 RPPRSTCQTLESTEQPNHEDPQPHPSAGAPIP 282
>NQRB_VIBPA (Q87MA7) Na(+)-translocating NADH-quinone reductase subunit B (EC| 1.6.5.-) (Na(+)-translocating NQR subunit B) (Na(+)-NQR subunit B) (NQR complex subunit B) (NQR-1 subunit B) Length = 414 Score = 30.0 bits (66), Expect = 3.2 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = -2 Query: 379 WAAGGSGVLLKTTNGGKTWVRDRAADNIPGNLYSV 275 WA GGSG L+ G D NIPG++ V Sbjct: 241 WAHGGSGALINNITGAPITWMDAFIGNIPGSIGEV 275
>PKHA4_RAT (P60669) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 29.3 bits (64), Expect = 5.4 Identities = 33/102 (32%), Positives = 39/102 (38%), Gaps = 12/102 (11%) Frame = +3 Query: 192 FFPLLQPTYRSKTPSFPSTKPWLSPMNFTE*RFPGMLSAALSRTQVLPPL------VVFS 353 F PL +P P S P++ + FP LSR V PPL S Sbjct: 233 FSPLSRPPSPLSLPRPRSAPVRRPPLSAGDISFPARPHTPLSRIDVRPPLDWGPQRQTLS 292 Query: 354 RTPLP---PAAHASSFE--R*PTSRIPNPRL-CTDASSKSST 461 R P+P P + A R P R P R T SS SST Sbjct: 293 RPPIPRRGPFSEAGGGRPPRSPQLRTPEHRTQSTQVSSGSST 334
>PCD12_HUMAN (Q9NPG4) Protocadherin-12 precursor (Vascular cadherin-2) (Vascular| endothelial cadherin-2) (VE-cadherin-2) (VE-cad-2) Length = 1184 Score = 29.3 bits (64), Expect = 5.4 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 6/52 (11%) Frame = +1 Query: 271 TLRSRGSQGCYRQPCRAPRSCRHWLFS------AGRRSHRLPTPHPLSGSPR 408 TLR++G+QG + + + LF+ A R + LP P P +G PR Sbjct: 825 TLRNQGNQGAPAESREVLQDTVNLLFNHPRQRNASRENLNLPEPQPATGQPR 876
>NQRB_VIBCH (Q9KPS2) Na(+)-translocating NADH-quinone reductase subunit B (EC| 1.6.5.-) (Na(+)-translocating NQR subunit B) (Na(+)-NQR subunit B) (NQR complex subunit B) (NQR-1 subunit B) Length = 415 Score = 28.9 bits (63), Expect = 7.1 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = -2 Query: 379 WAAGGSGVLLKTTNGGKTWVRDRAADNIPGNLYSV 275 WA GG+G L+ G D NIPG++ V Sbjct: 241 WAQGGAGALINNATGQTITWMDAFIGNIPGSIGEV 275
>NUOD1_RHIME (P56907) NADH-quinone oxidoreductase chain D 1 (EC 1.6.99.5) (NADH| dehydrogenase I, chain D 1) (NDH-1, chain D 1) Length = 396 Score = 28.9 bits (63), Expect = 7.1 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Frame = -2 Query: 460 VEDFEEASVQSRGFGI--LDVGYRSKDEAWAAGGSGVLLKTTNGGKTW 323 V+D +E +R F +D+G S ++AWA G SGV+++ G W Sbjct: 184 VDDIDELLTGNRIFKQRNVDIGVVSLEDAWAWGFSGVMVR--GSGAAW 229
>CWC27_ASPFU (Q4WE62) Peptidyl-prolyl isomerase cwc27 (EC 5.2.1.8)| Length = 559 Score = 28.9 bits (63), Expect = 7.1 Identities = 18/50 (36%), Positives = 25/50 (50%) Frame = +1 Query: 304 RQPCRAPRSCRHWLFSAGRRSHRLPTPHPLSGSPRPEFQTPGFVPTLPQS 453 +Q + PRS + R HR TP PL+ P P+ ++P P PQS Sbjct: 271 QQTRKRPRSPSPRRSLSAERKHRPKTPDPLTQLPLPDPESPARSP--PQS 318
>RIMM_ANASP (Q8YTB1) Probable 16S rRNA-processing protein rimM| Length = 246 Score = 28.9 bits (63), Expect = 7.1 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +1 Query: 355 GRRSHRLPTPHPLSGSPRPEFQTP 426 GR+ + P P P S P P+F TP Sbjct: 37 GRQGEKSPVPSPQSPIPNPQFTTP 60
>Y2068_BRUSU (Q8FY22) Maf-like protein BR2068| Length = 199 Score = 28.9 bits (63), Expect = 7.1 Identities = 14/55 (25%), Positives = 25/55 (45%) Frame = +2 Query: 188 VVFSATSANVSEQDAVVPEHKTLVVPNELYGVEVPRDVIGSPVAHPGLAAIGCFQ 352 + FS SA++ E+ P +++ P ++ + I +PG IGC Q Sbjct: 23 IEFSTASADIDERAVEAPLYESGATPEDVAQILAEAKAIDVSEKNPGAVVIGCDQ 77
>Y2059_BRUME (Q8YE19) Maf-like protein BMEI2059| Length = 199 Score = 28.9 bits (63), Expect = 7.1 Identities = 14/55 (25%), Positives = 25/55 (45%) Frame = +2 Query: 188 VVFSATSANVSEQDAVVPEHKTLVVPNELYGVEVPRDVIGSPVAHPGLAAIGCFQ 352 + FS SA++ E+ P +++ P ++ + I +PG IGC Q Sbjct: 23 IEFSTASADIDERAVEAPLYESGATPEDVAQILAEAKAIDVSEKNPGAVVIGCDQ 77
>GC1_RAT (P20759) Ig gamma-1 chain C region| Length = 326 Score = 28.9 bits (63), Expect = 7.1 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 4/34 (11%) Frame = +1 Query: 103 KKERWDNQQPFTCASIYGSL---HTKKGL-HSRG 192 KKE+W FTC+ ++ L HT+K L HS G Sbjct: 292 KKEKWQQGNTFTCSVLHEGLHNHHTEKSLSHSPG 325
>VGP3_EBV (P03200) Envelope glycoprotein GP340/GP220 (Membrane antigen) (MA)| Length = 907 Score = 28.9 bits (63), Expect = 7.1 Identities = 27/93 (29%), Positives = 35/93 (37%), Gaps = 6/93 (6%) Frame = +3 Query: 213 TYRSKTPSFPSTKPWLSPMNFTE*RFPGMLSAALSRTQVLP------PLVVFSRTPLPPA 374 T +P PS PW N TE + P M S+ T P P V TP P A Sbjct: 481 TTSGASPVTPSPSPW---DNGTESKAPDMTSSTSPVTTPTPNATSPTPAVT---TPTPNA 534 Query: 375 AHASSFER*PTSRIPNPRLCTDASSKSSTIPVP 473 + PT +P L + + + T P P Sbjct: 535 TSPTPAVTTPTPNATSPTLGKTSPTSAVTTPTP 567
>GATA1_HUMAN (P15976) Erythroid transcription factor (GATA-binding factor 1)| (GATA-1) (Eryf1) (GF-1) (NF-E1 DNA-binding protein) Length = 413 Score = 28.9 bits (63), Expect = 7.1 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = +1 Query: 352 AGRRSHRLPTPHPLSGSPRPEFQTPGFVPT 441 +G SH +P P PL GSP F T PT Sbjct: 373 SGPVSHLMPFPGPLLGSPTGSFPTGPMPPT 402
>VE2_HPV27 (P36789) Regulatory protein E2| Length = 388 Score = 28.9 bits (63), Expect = 7.1 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = +3 Query: 222 SKTPSFPSTKPWLSPMNFTE*RFPGMLSAALSRTQVLPPLVVFSRTPLPPAAHA 383 S T + S LSP+ P SAA +RT PP + P PP+ A Sbjct: 203 SSTQATASDDEPLSPIRLAVSPVPAPASAASARTGTAPPTNLLCTAPAPPSPPA 256
>CYSP7_DICDI (Q94504) Cysteine proteinase 7 precursor (EC 3.4.22.-) (Proteinase| 1) Length = 460 Score = 28.9 bits (63), Expect = 7.1 Identities = 13/41 (31%), Positives = 19/41 (46%) Frame = -2 Query: 307 ADNIPGNLYSVKFIGDNQGFVLGNDGVLLRYVG*SSGKNHG 185 + + G+LYS + G G GN G ++ G SG G Sbjct: 334 SQSFSGSLYSGSYSGSQSGSQSGNSGAAVKQTGAGSGSGSG 374
>SYNJ1_HUMAN (O43426) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1575 Score = 28.9 bits (63), Expect = 7.1 Identities = 21/72 (29%), Positives = 33/72 (45%) Frame = +3 Query: 204 LQPTYRSKTPSFPSTKPWLSPMNFTE*RFPGMLSAALSRTQVLPPLVVFSRTPLPPAAHA 383 LQP+ S + PS+ P SP + P + + + P SRTP PP+A + Sbjct: 1030 LQPSSSSGLGTSPSSSPRTSPC-----QSPTISEGPVPSLPIRPSRAP-SRTPGPPSAQS 1083 Query: 384 SSFER*PTSRIP 419 S + P + +P Sbjct: 1084 SPIDAQPATPLP 1095
>NQRB_VIBVY (Q7MIC8) Na(+)-translocating NADH-quinone reductase subunit B (EC| 1.6.5.-) (Na(+)-translocating NQR subunit B) (Na(+)-NQR subunit B) (NQR complex subunit B) (NQR-1 subunit B) Length = 414 Score = 28.9 bits (63), Expect = 7.1 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -2 Query: 379 WAAGGSGVLLKTTNGGK-TWVRDRAADNIPGNLYSV 275 WA GG+ L+ T G TW+ D NIPG++ V Sbjct: 241 WAQGGNSALVNTVTGAPITWL-DAFIGNIPGSIGEV 275
>NQRB_VIBVU (Q8DBJ5) Na(+)-translocating NADH-quinone reductase subunit B (EC| 1.6.5.-) (Na(+)-translocating NQR subunit B) (Na(+)-NQR subunit B) (NQR complex subunit B) (NQR-1 subunit B) Length = 414 Score = 28.9 bits (63), Expect = 7.1 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -2 Query: 379 WAAGGSGVLLKTTNGGK-TWVRDRAADNIPGNLYSV 275 WA GG+ L+ T G TW+ D NIPG++ V Sbjct: 241 WAQGGNSALVNTVTGAPITWL-DAFIGNIPGSIGEV 275
>GCB_RAT (P20761) Ig gamma-2B chain C region| Length = 333 Score = 28.5 bits (62), Expect = 9.2 Identities = 8/21 (38%), Positives = 15/21 (71%) Frame = +1 Query: 103 KKERWDNQQPFTCASIYGSLH 165 ++ RWD++ PF C+ ++ LH Sbjct: 299 ERSRWDSRAPFVCSVVHEGLH 319 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,911,876 Number of Sequences: 219361 Number of extensions: 1677833 Number of successful extensions: 5109 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 4702 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5078 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)