ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah63k22 |
|---|---|
| Clone Library Name | barley_pub |
>FKB70_WHEAT (Q43207) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8)| (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) Length = 559 Score = 53.9 bits (128), Expect = 9e-08 Identities = 22/36 (61%), Positives = 30/36 (83%) Frame = -1 Query: 391 DNREVKVAYKALKDKLREYNKRDAKFYGNMFAKWRK 284 +NR+VK+ YK LK+K++E NK+DAKFY NMF+K K Sbjct: 516 ENRDVKLTYKTLKEKIKEINKKDAKFYSNMFSKMTK 551
>FKB70_ARATH (Q38931) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8)| (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (Peptidylprolyl isomerase ROF1) Length = 551 Score = 53.9 bits (128), Expect = 9e-08 Identities = 23/36 (63%), Positives = 31/36 (86%) Frame = -1 Query: 391 DNREVKVAYKALKDKLREYNKRDAKFYGNMFAKWRK 284 +NREVK+ K LK+K++E+NK++AKFYGNMFAK K Sbjct: 515 NNREVKLEQKRLKEKMKEFNKKEAKFYGNMFAKLSK 550
>FKBP5_MOUSE (Q64378) FK506-binding protein 5 (EC 5.2.1.8) (Peptidyl-prolyl| cis-trans isomerase) (PPIase) (Rotamase) (51 kDa FK506-binding protein) (FKBP-51) Length = 456 Score = 37.0 bits (84), Expect = 0.011 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 15/64 (23%) Frame = -1 Query: 388 NREVKVAYKALKDKLREYNKRDAKFYGNMFAKW---------------RKTENAAGKQQD 254 NR ++ + K +E+N+RD + Y NMF K+ + E AAGKQ + Sbjct: 384 NRAARLQISMCQRKAKEHNERDRRVYANMFKKFAERDAKEEASKAGSKKAVEGAAGKQHE 443 Query: 253 AQPM 242 +Q M Sbjct: 444 SQAM 447
>FKBP5_PONPY (Q5RF88) FK506-binding protein 5 (EC 5.2.1.8) (Peptidyl-prolyl| cis-trans isomerase) (PPIase) (Rotamase) Length = 457 Score = 30.8 bits (68), Expect = 0.82 Identities = 11/37 (29%), Positives = 22/37 (59%) Frame = -1 Query: 388 NREVKVAYKALKDKLREYNKRDAKFYGNMFAKWRKTE 278 N+ ++ + K +E+N+RD + Y NMF K+ + + Sbjct: 384 NKAARLQISMCQKKAKEHNERDRRIYANMFKKFAEQD 420
>FKBP5_HUMAN (Q13451) FK506-binding protein 5 (EC 5.2.1.8) (Peptidyl-prolyl| cis-trans isomerase) (PPIase) (Rotamase) (51 kDa FK506-binding protein) (FKBP-51) (54 kDa progesterone receptor-associated immunophilin) (FKBP54) (P54) (FF1 antigen) (HSP90-bindin Length = 457 Score = 30.8 bits (68), Expect = 0.82 Identities = 11/37 (29%), Positives = 22/37 (59%) Frame = -1 Query: 388 NREVKVAYKALKDKLREYNKRDAKFYGNMFAKWRKTE 278 N+ ++ + K +E+N+RD + Y NMF K+ + + Sbjct: 384 NKAARLQISMCQKKAKEHNERDRRIYANMFKKFAEQD 420
>FKBP5_CERAE (Q95L05) FK506-binding protein 5 (EC 5.2.1.8) (Peptidyl-prolyl| cis-trans isomerase) (51 kDa FK506-binding immunophilin) (FKBP-51) Length = 457 Score = 30.8 bits (68), Expect = 0.82 Identities = 11/37 (29%), Positives = 22/37 (59%) Frame = -1 Query: 388 NREVKVAYKALKDKLREYNKRDAKFYGNMFAKWRKTE 278 N+ ++ + K +E+N+RD + Y NMF K+ + + Sbjct: 384 NKAARLQISMCQKKAKEHNERDRRIYANMFKKFAEQD 420
>TCF17_HUMAN (O60765) Zinc finger protein 354A (Transcription factor 17) (Zinc| finger protein eZNF) Length = 605 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Frame = +1 Query: 25 SFGTSRNAAHHRRVYATEQRTKPPNYGTTSR--SSRIGRQPRYSADRNYDAD 174 SFG S HRR++ E+ K G T R SSRI Q ++ ++ Y+ + Sbjct: 530 SFGQSSALIQHRRIHTGEKPFKCNTCGKTFRQSSSRIAHQRIHTGEKPYECN 581
>ZAN_HUMAN (Q9Y493) Zonadhesin precursor| Length = 2812 Score = 30.4 bits (67), Expect = 1.1 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = -2 Query: 90 FCPLFCSVYSSVMGCVP*CT 31 FCPL C YSS C+P C+ Sbjct: 2206 FCPLECPAYSSYTNCLPSCS 2225
>TCF17_MOUSE (Q61751) Zinc finger protein 354A (Transcription factor 17) (Renal| transcription factor Kid-1) (Kidney, ischemia, and developmentally-regulated protein 1) Length = 572 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Frame = +1 Query: 25 SFGTSRNAAHHRRVYATEQRTKPPNYGTTSR--SSRIGRQPRYSADRNYDAD 174 SFG S HRR++ E+ K G T R SSRI Q ++ ++ Y+ + Sbjct: 497 SFGQSSALIQHRRIHTGEKPFKCNTCGKTFRQSSSRIAHQRIHTGEKPYECN 548
>FKBP5_SAGOE (Q9XSI2) FK506-binding protein 5 (EC 5.2.1.8) (Peptidyl-prolyl| cis-trans isomerase) (51 kDa FK506-binding immunophilin) (FKBP-51) Length = 457 Score = 30.4 bits (67), Expect = 1.1 Identities = 11/37 (29%), Positives = 22/37 (59%) Frame = -1 Query: 388 NREVKVAYKALKDKLREYNKRDAKFYGNMFAKWRKTE 278 N+ ++ + K +E+N+RD + Y NMF K+ + + Sbjct: 384 NKAARLQIVVCQKKAKEHNERDRRIYANMFKKFAEQD 420
>TCF17_RAT (Q02975) Zinc finger protein 354A (Transcription factor 17) (Renal| transcription factor Kid-1) (Kidney, ischemia, and developmentally-regulated protein 1) Length = 576 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Frame = +1 Query: 25 SFGTSRNAAHHRRVYATEQRTKPPNYGTTSR--SSRIGRQPRYSADRNYDAD 174 SFG S HRR++ E+ K G T R SSRI Q ++ ++ Y+ + Sbjct: 501 SFGQSSALIQHRRIHTGEKPFKCNTCGKTFRQSSSRIAHQRIHTGEKPYECN 552
>FKBP5_AOTNA (Q9XT11) FK506-binding protein 5 (EC 5.2.1.8) (Peptidyl-prolyl| cis-trans isomerase) (51 kDa FK506-binding immunophilin) (FKBP-51) Length = 457 Score = 29.6 bits (65), Expect = 1.8 Identities = 11/37 (29%), Positives = 22/37 (59%) Frame = -1 Query: 388 NREVKVAYKALKDKLREYNKRDAKFYGNMFAKWRKTE 278 N+ ++ + K +E+N+RD + Y NMF K+ + + Sbjct: 384 NKAARLQIFMCQKKAKEHNERDRRIYANMFKKFAEQD 420
>ZAN_RABIT (P57999) Zonadhesin (Fragment)| Length = 2282 Score = 29.6 bits (65), Expect = 1.8 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = -2 Query: 90 FCPLFCSVYSSVMGCVP*CT 31 FCPL C YS+ C+P C+ Sbjct: 1665 FCPLACPAYSTYTNCLPSCS 1684
>UPPP_RHOS4 (Q3IYQ0) Undecaprenyl-diphosphatase (EC 3.6.1.27) (Undecaprenyl| pyrophosphate phosphatase) (Bacitracin resistance protein) Length = 268 Score = 29.6 bits (65), Expect = 1.8 Identities = 14/45 (31%), Positives = 19/45 (42%) Frame = -2 Query: 225 RDGAAAS*YGRVGSGFTISVVVSISAVPWLSSYSAAPACGAVVWW 91 RD AS G + GF + V ++ V WL Y + WW Sbjct: 208 RDVLDASALGEIAVGFVAAFVAAVLVVRWLLGYVSRHGYALFGWW 252
>PLCL4_HUMAN (O75038) 1-phosphatidylinositol-4,5-bisphosphate| phosphodiesterase-like 4 (EC 3.1.4.11) (Phosphoinositide phospholipase C-like 4) (Phospholipase C-like 4) (Fragment) Length = 1182 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +1 Query: 79 QRTKPPNYGTTSRSSRIGRQPRYSAD 156 QR +PP+ G SR + I +QPR AD Sbjct: 1062 QRERPPSPGPASRQAAIRQQPRARAD 1087
>ZAN_PIG (Q28983) Zonadhesin precursor| Length = 2476 Score = 28.9 bits (63), Expect = 3.1 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = -2 Query: 90 FCPLFCSVYSSVMGCVP*C 34 FCPL CS +S CVP C Sbjct: 1846 FCPLDCSAHSVYTSCVPSC 1864
>FKBP5_SAIBB (Q9XSH5) FK506-binding protein 5 (EC 5.2.1.8) (Peptidyl-prolyl| cis-trans isomerase) (51 kDa FK506-binding immunophilin) (FKBP-51) Length = 457 Score = 28.9 bits (63), Expect = 3.1 Identities = 11/37 (29%), Positives = 22/37 (59%) Frame = -1 Query: 388 NREVKVAYKALKDKLREYNKRDAKFYGNMFAKWRKTE 278 N+ ++ + K +E+N+RD + Y NMF K+ + + Sbjct: 384 NKAARLQIFMCQKKAKEHNERDRRTYANMFKKFAEQD 420
>IF16_HUMAN (Q16666) Gamma-interferon-inducible protein Ifi-16| (Interferon-inducible myeloid differentiation transcriptional activator) (IFI 16) Length = 785 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/52 (23%), Positives = 24/52 (46%) Frame = +1 Query: 73 TEQRTKPPNYGTTSRSSRIGRQPRYSADRNYDADGESGPDPAILGRCSAVTR 228 +E++T+PP+ S+ +GR P + + S +P + +C R Sbjct: 145 SEEQTQPPSPAGAGMSTAMGRSPSPKTSLSAPPNSSSTENPKTVAKCQVTPR 196
>FKBP4_RABIT (P27124) FK506-binding protein 4 (EC 5.2.1.8) (Peptidyl-prolyl| cis-trans isomerase) (PPIase) (Rotamase) (p59 protein) (HSP-binding immunophilin) (HBI) (FKBP52 protein) (52 kDa FK506-binding protein) (FKBP59) Length = 457 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/53 (26%), Positives = 25/53 (47%) Frame = -1 Query: 388 NREVKVAYKALKDKLREYNKRDAKFYGNMFAKWRKTENAAGKQQDAQPMAIDS 230 N+ K + ++R+ R+ K Y NMF + + EN A + A +D+ Sbjct: 385 NKAAKAQLAVCQQRIRKQIAREKKLYANMFERLAEEENKAKAEVAAGDHPMDT 437
>FKBP4_HUMAN (Q02790) FK506-binding protein 4 (EC 5.2.1.8) (Peptidyl-prolyl| cis-trans isomerase) (PPIase) (Rotamase) (p59 protein) (HSP-binding immunophilin) (HBI) (FKBP52 protein) (52 kDa FK506-binding protein) (FKBP59) Length = 458 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/41 (29%), Positives = 20/41 (48%) Frame = -1 Query: 391 DNREVKVAYKALKDKLREYNKRDAKFYGNMFAKWRKTENAA 269 +N+ K + ++R R+ K Y NMF + + EN A Sbjct: 384 NNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKA 424
>UXAC_XANAC (Q8PET9) Uronate isomerase (EC 5.3.1.12) (Glucuronate isomerase)| (Uronic isomerase) Length = 472 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -1 Query: 208 VLVWPGRVRIHHQRRSFY 155 VL W G +R H QRR+F+ Sbjct: 225 VLTWDGYLRAHRQRRAFF 242
>ENAM_PIG (O97939) Enamelin precursor [Contains: 89 kDa enamelin; 142 kDa| enamelin; 155 kDa enamelin; 56 kDa enamelin; 32 kDa enamelin; 25 kDa enamelin; 34 kDa enamelin] Length = 1142 Score = 27.7 bits (60), Expect = 6.9 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = +1 Query: 55 HRRVYATEQRTKPPNYGTTSRSSR 126 +RRVY + R+ PPNY S + R Sbjct: 374 YRRVYGSTARSNPPNYAGNSANLR 397
>Y4JS_RHISN (P55519) Hypothetical 44.8 kDa protein y4jS| Length = 413 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/44 (22%), Positives = 25/44 (56%) Frame = +3 Query: 15 YXGQFWYIKERSPSQTSIRYRTEDKTTKLRHHKQEQQNRKTTTV 146 + + W+++E PS+T+ + R +K L+ ++ Q N+ + + Sbjct: 106 FSARSWFVEEVGPSKTTWKLRLMEKLQYLKAREEYQGNQSKSEI 149
>PK1L1_MOUSE (Q8R526) Polycystic kidney disease 1-like 1 protein| (Polycystin-1L1) (Fragment) Length = 531 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%) Frame = -2 Query: 228 PRDGAAAS*YGRVGSGFTISVVVSISAVPWLSSYSAAPACGA----VVWWFCPLFC 73 P A S + +GS + ++ S+V W S SA+ ACG + +WF P C Sbjct: 382 PSSQAPGSGFEELGSQKSRVCLLWSSSVAWAISGSASLACGLGTGFLGYWFVPAQC 437
>UXAC_XANOR (Q9AM27) Uronate isomerase (EC 5.3.1.12) (Glucuronate isomerase)| (Uronic isomerase) Length = 472 Score = 27.3 bits (59), Expect = 9.1 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -1 Query: 208 VLVWPGRVRIHHQRRSFY 155 VL W G +R H QRR+F+ Sbjct: 225 VLTWNGYLRAHRQRRAFF 242
>SNX15_HUMAN (Q9NRS6) Sorting nexin-15| Length = 342 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = +1 Query: 118 SSRIGRQPRYSADRNYDADGESGPDPAILGRCS 216 S+R+ ++P + + DGE GP PA L + + Sbjct: 241 SARLDQEPWEPGGQEEEEDGEGGPTPAYLSQAT 273
>ATG15_ASPFU (Q4X180) Putative lipase atg15 (EC 3.1.1.3) (Autophagy-related| protein 15) Length = 650 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/39 (33%), Positives = 15/39 (38%), Gaps = 2/39 (5%) Frame = +1 Query: 130 GRQPRYSADRNYDADGESG--PDPAILGRCSAVTRCCRW 240 G PR R Y G DP +G C+ V C W Sbjct: 359 GHDPRLPQSRQYTGAYHFGHTADPVYMGTCNGVGSICTW 397
>PRRXL_RAT (Q62798) Paired-related homeobox protein-like 1 (Homeobox protein| DRG11) Length = 263 Score = 27.3 bits (59), Expect = 9.1 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = -1 Query: 361 ALKDKLREYNKRDAKFYGNMFAKWRKTENAAGKQQDA--QPMA 239 A+K L E R ++ N AKWRKTE A Q+ +PMA Sbjct: 67 AMKINLTE--ARVQVWFQNRRAKWRKTERGASDQEPGAKEPMA 107 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,405,714 Number of Sequences: 219361 Number of extensions: 722663 Number of successful extensions: 2552 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 2429 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2550 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 1380984984 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
