Clone Information

BLAST Search Result

Clone Name	rbah63k20
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloropl...	217	1e-56
2	FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloropl...	213	3e-55
3	FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chlor...	213	3e-55
4	FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chlor...	206	2e-53
5	FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloropl...	171	9e-43
6	FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3....	120	2e-27
7	FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.2...	102	6e-22
8	FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.2...	102	6e-22
9	FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3....	102	8e-22
10	FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.2...	99	5e-21
11	FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.2...	97	3e-20
12	FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.2...	94	2e-19
13	FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3....	89	1e-17
14	FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3....	89	1e-17
15	FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)	88	2e-17
16	FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)	88	2e-17
17	FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)	87	3e-17
18	FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)	87	3e-17
19	FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.2...	87	3e-17
20	FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)	87	3e-17
21	FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)	87	3e-17
22	FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)	87	4e-17
23	FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)	86	5e-17
24	FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.2...	86	6e-17
25	FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.2...	86	8e-17
26	FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.2...	84	2e-16
27	FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.2...	84	3e-16
28	FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.2...	82	9e-16
29	FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3....	80	3e-15
30	FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.2...	80	3e-15
31	FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3....	79	1e-14
32	FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.2...	78	1e-14
33	FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.2...	72	9e-13
34	FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.2...	72	9e-13
35	FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.2...	69	6e-12
36	YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4....	67	4e-11
37	YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3....	67	4e-11
38	YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3....	67	4e-11
39	AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)	66	7e-11
40	AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Parapleg...	64	2e-10
41	AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes as...	64	3e-10
42	AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)	64	3e-10
43	FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.2...	62	7e-10
44	SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia...	62	1e-09
45	RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes as...	62	1e-09
46	YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)	60	5e-09
47	FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.2...	58	1e-08
48	FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.2...	58	1e-08
49	FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.2...	58	2e-08
50	YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homo...	57	2e-08
51	YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)	55	9e-08
52	TSG6_MOUSE (O08859) Tumor necrosis factor-inducible protein TSG-...	33	0.62
53	TSG6_RABIT (P98065) Tumor necrosis factor-inducible protein TSG-...	32	0.81
54	CTF1A_FUSSO (P52958) Cutinase transcription factor 1 alpha	31	1.8
55	GLND_METCA (Q60BB2) [Protein-PII] uridylyltransferase (EC 2.7.7....	31	2.4
56	CK016_MOUSE (Q9JJR6) Protein C11orf16 homolog	30	3.1
57	CH601_CORDI (Q6NJ37) 60 kDa chaperonin 1 (Protein Cpn60 1) (groE...	30	4.0
58	YEA8_SCHPO (O14073) Putative dipeptidyl aminopeptidase C2E11.08 ...	29	9.0
59	CR023_HUMAN (Q8NB54) Protein C18orf23	29	9.0
60	DDC_HUMAN (P20711) Aromatic-L-amino-acid decarboxylase (EC 4.1.1...	29	9.0
61	TSG6_HUMAN (P98066) Tumor necrosis factor-inducible protein TSG-...	29	9.0
62	AROA_LISIN (Q92A85) 3-phosphoshikimate 1-carboxyvinyltransferase...	29	9.0
63	ARGJ_METAC (Q8TK55) Arginine biosynthesis bifunctional protein a...	29	9.0

>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-)
          Length = 706

 Score =  217 bits (553), Expect = 1e-56
 Identities = 110/122 (90%), Positives = 116/122 (95%)
 Frame = -2

Query: 522 QDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMAT 343
           QDNVTTGAS+DFMQVSRVARQMVERFGFSKKIGQVAIG  GGNPFLGQQMSSQKDYSMAT
Sbjct: 585 QDNVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGGGGNPFLGQQMSSQKDYSMAT 644

Query: 342 ADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQAELF 163
           ADIVD EVRELV+ AY RATQIINTHIDILH+LA LLIEKETVDGEEFMSLFIDG+AEL+
Sbjct: 645 ADIVDKEVRELVDKAYERATQIINTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELY 704

Query: 162 VA 157
           V+
Sbjct: 705 VS 706

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>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (DS9)
          Length = 714

 Score =  213 bits (542), Expect = 3e-55
 Identities = 107/125 (85%), Positives = 117/125 (93%)
 Frame = -2

Query: 522 QDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMAT 343
           QDNVTTGAS+DFMQVSRVARQMVER GFSKKIGQVAIG  GGNPFLGQQMS+QKDYSMAT
Sbjct: 586 QDNVTTGASNDFMQVSRVARQMVERLGFSKKIGQVAIGGGGGNPFLGQQMSTQKDYSMAT 645

Query: 342 ADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQAELF 163
           AD+VDAEVRELVE AY RAT+II THIDILH+LA LLIEKETVDGEEFMSLFIDG+AEL+
Sbjct: 646 ADVVDAEVRELVERAYERATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELY 705

Query: 162 VA*VA 148
           ++ V+
Sbjct: 706 ISWVS 710

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>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 716

 Score =  213 bits (541), Expect = 3e-55
 Identities = 105/121 (86%), Positives = 115/121 (95%)
 Frame = -2

Query: 519 DNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATA 340
           +NVTTGAS+DFMQVSRVARQM+ERFGFSKKIGQVA+G  GGNPF+GQQMSSQKDYSMATA
Sbjct: 596 ENVTTGASNDFMQVSRVARQMIERFGFSKKIGQVAVGGPGGNPFMGQQMSSQKDYSMATA 655

Query: 339 DIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQAELFV 160
           DIVDAEVRELVE AY RAT+II THIDILH+LA LLIEKETVDGEEFMSLFIDGQAEL++
Sbjct: 656 DIVDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGQAELYI 715

Query: 159 A 157
           +
Sbjct: 716 S 716

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>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 704

 Score =  206 bits (525), Expect = 2e-53
 Identities = 104/121 (85%), Positives = 113/121 (93%)
 Frame = -2

Query: 519 DNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATA 340
           +NVTTGAS+DFMQVSRVARQMVERFGFSKKIGQVA+G +GGNPFLGQ MSSQKDYSMATA
Sbjct: 584 ENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAVGGAGGNPFLGQSMSSQKDYSMATA 643

Query: 339 DIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQAELFV 160
           D+VDAEVRELVE AY RA +II T IDILH+LA LLIEKETVDGEEFMSLFIDGQAEL+V
Sbjct: 644 DVVDAEVRELVEKAYVRAKEIITTQIDILHKLAQLLIEKETVDGEEFMSLFIDGQAELYV 703

Query: 159 A 157
           +
Sbjct: 704 S 704

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>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (Fragment)
          Length = 662

 Score =  171 bits (434), Expect = 9e-43
 Identities = 86/100 (86%), Positives = 92/100 (92%)
 Frame = -2

Query: 522 QDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMAT 343
           +DNVTTGAS+DFMQVSRVARQMVER GFSKKIGQVAIG  GGNPFLGQQMS+QKDYSMAT
Sbjct: 563 EDNVTTGASNDFMQVSRVARQMVERLGFSKKIGQVAIGGGGGNPFLGQQMSTQKDYSMAT 622

Query: 342 ADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEK 223
           AD+VD+EVRELVE AY RA QII THIDILH+LA LLIEK
Sbjct: 623 ADVVDSEVRELVEKAYERAKQIITTHIDILHKLAQLLIEK 662

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>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score =  120 bits (302), Expect = 2e-27
 Identities = 60/119 (50%), Positives = 84/119 (70%)
 Frame = -2

Query: 522 QDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMAT 343
           ++ VTTGAS+D  QV+RVARQMV RFG S ++G VA+G  GG  FLG+ ++S +D+S  T
Sbjct: 494 EEEVTTGASNDLQQVARVARQMVTRFGMSDRLGPVALGRQGGGVFLGRDIASDRDFSDET 553

Query: 342 ADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQAEL 166
           A  +D EV +LV+ AY RA Q++  +  IL +LA +L+EKETVD EE  +L  +  A+L
Sbjct: 554 AAAIDEEVSQLVDQAYQRAKQVLVENRGILDQLAEILVEKETVDSEELQTLLANNNAKL 612

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>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score =  102 bits (254), Expect = 6e-22
 Identities = 52/110 (47%), Positives = 71/110 (64%)
 Frame = -2

Query: 510 TTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIV 331
           TTGA SD  Q +++AR MV  FG S K+G V  GS  G+PFLG+ M +Q DYS   A  +
Sbjct: 495 TTGAVSDIEQATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREI 554

Query: 330 DAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFID 181
           D EVR+L+E A++ A +I+  + D+L  LA  L+EKET+   E  S+F D
Sbjct: 555 DEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFAD 604

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>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score =  102 bits (254), Expect = 6e-22
 Identities = 52/110 (47%), Positives = 71/110 (64%)
 Frame = -2

Query: 510 TTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIV 331
           TTGA SD  Q +++AR MV  FG S K+G V  GS  G+PFLG+ M +Q DYS   A  +
Sbjct: 495 TTGAVSDIEQATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREI 554

Query: 330 DAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFID 181
           D EVR+L+E A++ A +I+  + D+L  LA  L+EKET+   E  S+F D
Sbjct: 555 DEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFAD 604

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>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 627

 Score =  102 bits (253), Expect = 8e-22
 Identities = 51/110 (46%), Positives = 73/110 (66%)
 Frame = -2

Query: 519 DNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATA 340
           D VTTGA  D  QV+ +ARQMV RFG S  +G +++ SSGG  FLG  + ++ +YS   A
Sbjct: 502 DEVTTGAGGDLQQVTEMARQMVTRFGMSN-LGPISLESSGGEVFLGGGLMNRSEYSEEVA 560

Query: 339 DIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 190
             +DA+VR+L E  +  A +I+    +++ RL +LLIEKET+DGEEF  +
Sbjct: 561 TRIDAQVRQLAEQGHQMARKIVQEQREVVDRLVDLLIEKETIDGEEFRQI 610

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>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 628

 Score = 99.4 bits (246), Expect = 5e-21
 Identities = 51/105 (48%), Positives = 71/105 (67%)
 Frame = -2

Query: 513 VTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADI 334
           VTTGAS+D  QV+ +ARQMV RFG SK IG +++ S G +PFLG+ M    +YS   A  
Sbjct: 505 VTTGASNDLQQVTSMARQMVTRFGMSK-IGPLSLESQGSDPFLGRGMGGGSEYSDEVATN 563

Query: 333 VDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEF 199
           +D +VRE+V   Y  A +I+  +  ++ RL +LLIEKET++G EF
Sbjct: 564 IDKQVREIVSECYKEAKKIVKDNRVVMDRLVDLLIEKETIEGNEF 608

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>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score = 97.1 bits (240), Expect = 3e-20
 Identities = 49/108 (45%), Positives = 69/108 (63%)
 Frame = -2

Query: 510 TTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIV 331
           TTGA SD  + +++AR MV  FG S K+G V  GS  G+PFLG+ M +Q DYS   A  +
Sbjct: 495 TTGAVSDIEKATKIARSMVTEFGMSSKLGAVRYGSEHGDPFLGRTMGTQADYSHEVARDI 554

Query: 330 DAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLF 187
           D EVR+L+E A++ A +I+  + D+L  LA  L+EKET+   E   +F
Sbjct: 555 DDEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELEGIF 602

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>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 631

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 48/111 (43%), Positives = 71/111 (63%)
 Frame = -2

Query: 513 VTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADI 334
           VTTGA +D  QV+ +ARQMV RFG S  IG +++ S   +PFLG+ M S   YS   A  
Sbjct: 505 VTTGAGNDLQQVTSMARQMVTRFGMSN-IGPLSLESQNSDPFLGRTMGSSSQYSEDIASR 563

Query: 333 VDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFID 181
           +D +VR +++  ++   QII  +  ++ +L +LLIEKET+DG+EF  +  D
Sbjct: 564 IDMQVRAIIQHCHTETVQIIKDNRVVIDKLVDLLIEKETIDGDEFRQIVGD 614

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>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 381

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 42/111 (37%), Positives = 70/111 (63%)
 Frame = -2

Query: 522 QDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMAT 343
           ++N++TGAS+D    + +AR MV ++GFS+K+G +      G  FLG+ M+  K  S  T
Sbjct: 227 EENISTGASNDIKVATNIARNMVTQWGFSEKLGPILYTEDEGEVFLGRSMAKAKHMSDET 286

Query: 342 ADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 190
           A  +D EVR +V   Y+RA +I+  ++DILH + + L++ ET++ E+   L
Sbjct: 287 AHSIDEEVRAIVNRNYARAREILIDNMDILHAMKDALVKYETIEEEQIKQL 337

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>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 635

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 42/111 (37%), Positives = 70/111 (63%)
 Frame = -2

Query: 522 QDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMAT 343
           ++N++TGAS+D    + +AR MV ++GFS+K+G +      G  FLG+ M+  K  S  T
Sbjct: 481 EENISTGASNDIKVATNIARNMVTQWGFSEKLGPILYTEDEGEVFLGRSMAKAKHMSDET 540

Query: 342 ADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 190
           A  +D EVR +V   Y+RA +I+  ++DILH + + L++ ET++ E+   L
Sbjct: 541 AHSIDEEVRAIVNRNYARAREILIDNMDILHAMKDALVKYETIEEEQIKQL 591

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>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 43/110 (39%), Positives = 70/110 (63%)
 Frame = -2

Query: 519 DNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATA 340
           ++V+TGAS+D    + +AR MV ++GFS+K+G +      G  FLG+ ++  K  S  TA
Sbjct: 483 EHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETA 542

Query: 339 DIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 190
            I+D EV+ L+E  Y+RA QI+  ++DILH + + L++ ET+D  +   L
Sbjct: 543 RIIDQEVKALIERNYNRARQILTDNMDILHAMKDALMKYETIDAPQIDDL 592

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>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 43/110 (39%), Positives = 70/110 (63%)
 Frame = -2

Query: 519 DNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATA 340
           ++V+TGAS+D    + +AR MV ++GFS+K+G +      G  FLG+ ++  K  S  TA
Sbjct: 483 EHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETA 542

Query: 339 DIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 190
            I+D EV+ L+E  Y+RA QI+  ++DILH + + L++ ET+D  +   L
Sbjct: 543 RIIDQEVKALIERNYNRARQILTDNMDILHAMKDALMKYETIDAPQIDDL 592

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>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 613

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 43/102 (42%), Positives = 66/102 (64%)
 Frame = -2

Query: 516 NVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATAD 337
           NV+TGA +D    + +AR MV ++GFS K+G +      G  FLG+ ++  K  S  TA 
Sbjct: 484 NVSTGAFNDIKVATNLARNMVTQWGFSDKLGPLLYAEEEGEVFLGRSVAKAKHMSDETAR 543

Query: 336 IVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 211
           I+D EV+ L+E  Y+RA +I+N ++DILH + + LI+ ET+D
Sbjct: 544 IIDEEVKLLIEVNYNRARKILNENLDILHAMKDALIKYETID 585

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>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 42/110 (38%), Positives = 70/110 (63%)
 Frame = -2

Query: 519 DNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATA 340
           ++V+TGAS+D    + +AR MV ++GFS+K+G +      G  FLG+ ++  K  S  TA
Sbjct: 483 EHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETA 542

Query: 339 DIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 190
            I+D EV+ L+E  Y+RA Q++  ++DILH + + L++ ET+D  +   L
Sbjct: 543 RIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDL 592

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>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 644

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 48/112 (42%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
 Frame = -2

Query: 522 QDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAI-GSSGGNPFLGQQMSSQKDYSMA 346
           +  VTTGASSD  QV+ +ARQMV RFG S  IG +A+   S G  FLG  M+S  +Y+  
Sbjct: 515 EPEVTTGASSDLQQVTNLARQMVTRFGMSN-IGPLALEDESTGQVFLGGNMASGSEYAEN 573

Query: 345 TADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 190
            AD +D EVR+++   Y +A +I+  +  ++  +   L++KET+DG+EF  L
Sbjct: 574 IADRIDDEVRKIITYCYEKAIEIVLDNRVVIDLIVEKLLDKETMDGDEFREL 625

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>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 42/110 (38%), Positives = 70/110 (63%)
 Frame = -2

Query: 519 DNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATA 340
           ++V+TGAS+D    + +AR MV ++GFS+K+G +      G  FLG+ ++  K  S  TA
Sbjct: 483 EHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETA 542

Query: 339 DIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 190
            I+D EV+ L+E  Y+RA Q++  ++DILH + + L++ ET+D  +   L
Sbjct: 543 RIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDL 592

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>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 42/110 (38%), Positives = 70/110 (63%)
 Frame = -2

Query: 519 DNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATA 340
           ++V+TGAS+D    + +AR MV ++GFS+K+G +      G  FLG+ ++  K  S  TA
Sbjct: 483 EHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETA 542

Query: 339 DIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 190
            I+D EV+ L+E  Y+RA Q++  ++DILH + + L++ ET+D  +   L
Sbjct: 543 RIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDL 592

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>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 610

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 44/110 (40%), Positives = 69/110 (62%)
 Frame = -2

Query: 519 DNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATA 340
           +NV+TGA +D    + +AR MV ++GFSKK+G +      G  FLG+ ++  K  S  TA
Sbjct: 483 NNVSTGAHNDIKVATNLARNMVTQWGFSKKLGPLLYSEEEGEIFLGRTVTKSKHMSDETA 542

Query: 339 DIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 190
            I+D EV+ LVE  Y+RA +I+  ++DILH + + LI+ ET++  +   L
Sbjct: 543 RIIDEEVKLLVEKNYNRAKKILEENLDILHAMKDALIKYETINSRQIDDL 592

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>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score = 86.3 bits (212), Expect = 5e-17
 Identities = 44/102 (43%), Positives = 65/102 (63%)
 Frame = -2

Query: 516 NVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATAD 337
           NV+TGA +D    + +A+ MV ++GFS+K+G +      G  FLG+ ++  K  S  TA 
Sbjct: 484 NVSTGAYNDIKIATSLAKNMVTQWGFSEKLGPLLYAEEEGEIFLGRSVAKAKHMSDETAR 543

Query: 336 IVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 211
           I+D EV+ L+E  YSRA  I+N +IDILH +   LI+ ET+D
Sbjct: 544 IIDEEVKLLIEINYSRARNILNENIDILHAMKEALIKYETID 585

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>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 679

 Score = 85.9 bits (211), Expect = 6e-17
 Identities = 43/114 (37%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
 Frame = -2

Query: 513 VTTGASSDFMQVSRVARQMVERFGFSKKIGQVA-IGSSGGNPFLGQQMSSQKDYSMATAD 337
           V+TGA +DF + + +AR+MV  +G S+K+G +  I  SGG  FLG+ + ++++YS A A 
Sbjct: 497 VSTGAHNDFQRATGIARKMVTEYGMSEKLGPMQFISGSGGQVFLGRDIQNEQNYSDAIAH 556

Query: 336 IVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 175
            +D EV+ +++  Y+R  QI+  + D L  +A  L++ ET+D E+  SL  +G+
Sbjct: 557 EIDLEVQRIIKECYARCKQILLENKDSLDLVAKTLLDMETLDAEQIKSLVHEGK 610

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>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 85.5 bits (210), Expect = 8e-17
 Identities = 49/117 (41%), Positives = 75/117 (64%)
 Frame = -2

Query: 522 QDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMAT 343
           ++ VT+GASSD    + +AR MV + G S  IG +  GSSG + + G+Q +++   S AT
Sbjct: 485 RNKVTSGASSDIKGATNIARAMVTKAGLSDLIGPIFHGSSGDDMY-GRQPNNET--SEAT 541

Query: 342 ADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQA 172
           A+++DAEV+ ++   Y  A  I+  HID LH LAN LIE ET+ G++  +L + G+A
Sbjct: 542 AELIDAEVKRIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNL-LSGRA 597

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>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 42/113 (37%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
 Frame = -2

Query: 513 VTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSS-GGNPFLGQQMSSQKDYSMATAD 337
           V+TGA +DF + + +AR+MV  FG S+K+G +  G S GG  FLG+  +++++YS   A 
Sbjct: 492 VSTGAHNDFQRATNIARRMVTEFGMSEKLGPLQFGQSQGGQVFLGRDFNNEQNYSDQIAY 551

Query: 336 IVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDG 178
            +D E++ +++  Y RA QI+  + D L  +A  L++ ET+D E+   L   G
Sbjct: 552 EIDQEIQRIIKECYERAKQILTENRDKLELIAQTLLKVETLDAEQIKHLIDHG 604

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>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 83.6 bits (205), Expect = 3e-16
 Identities = 48/117 (41%), Positives = 74/117 (63%)
 Frame = -2

Query: 522 QDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMAT 343
           ++ VT+GASSD    + +AR MV + G S  IG +  GS+  + + G+Q S++   S AT
Sbjct: 485 RNKVTSGASSDIKGATNIARAMVTKAGLSDLIGPIFHGSNSDDMY-GRQSSNE--ISEAT 541

Query: 342 ADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQA 172
           A+++DAEV+ ++   Y  A  I+  HID LH LAN LIE ET+ G++  +L + G+A
Sbjct: 542 AELIDAEVKRIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNL-LSGRA 597

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>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 695

 Score = 82.0 bits (201), Expect = 9e-16
 Identities = 44/112 (39%), Positives = 66/112 (58%)
 Frame = -2

Query: 510 TTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIV 331
           T GAS+D  + + +AR MV  +G SKK+G V+        F+G+     K YS ATA ++
Sbjct: 526 TPGASNDIEKATHIARSMVTEYGMSKKLGMVSY-EGDHQVFIGRDYGQTKTYSEATAVMI 584

Query: 330 DAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 175
           D EVR ++  AY RA + I TH +    +A  L++ ET+D ++ MSLF  G+
Sbjct: 585 DDEVRRILGEAYDRAKEAIETHREQHKAIAEALLKYETLDAKQIMSLFKTGK 636

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>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)|
          Length = 628

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 44/117 (37%), Positives = 71/117 (60%), Gaps = 1/117 (0%)
 Frame = -2

Query: 519 DNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSS-QKDYSMAT 343
           D++TTGA++D  + + +A QMV  +G SK +G +A      N FLGQ M + ++  S  T
Sbjct: 506 DSITTGAANDLQRATDLAEQMVTTYGMSKVLGPLAYDKGQQNNFLGQGMGNPRRMVSDDT 565

Query: 342 ADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQA 172
           A  +D EV+E+VE  +++A  I+  + D+L  +A  ++EKE ++GEE   L    QA
Sbjct: 566 AKEIDLEVKEIVEQGHNQALAILEHNRDLLEAIAEKILEKEVIEGEELHHLLGQVQA 622

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>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)|
          Length = 603

 Score = 80.1 bits (196), Expect = 3e-15
 Identities = 41/108 (37%), Positives = 65/108 (60%)
 Frame = -2

Query: 513 VTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADI 334
           VTTGAS+D  QV+ +ARQMV RFG S  +G + + +     FLG+ M    + S      
Sbjct: 486 VTTGASNDLQQVTNLARQMVTRFGMSS-LGPLCLETGNEEIFLGRDMRLMPEVSEEVIAQ 544

Query: 333 VDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 190
           +DA+VR ++E  Y +  +++  +  ++ R+   L+EKET+DG+EF  L
Sbjct: 545 IDAQVRGMIEACYEKVLELMQANRVVMDRIVEELMEKETLDGKEFRQL 592

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>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 665

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 41/110 (37%), Positives = 66/110 (60%)
 Frame = -2

Query: 519 DNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATA 340
           D VTTGA +D  +++ +ARQMV + G S  +G VA+   G   F G     + +YS   A
Sbjct: 541 DEVTTGAGNDIEKITYLARQMVTKLGMSS-LGLVALEEEGDRNFSGGDWGKRSEYSEDIA 599

Query: 339 DIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 190
             +D E++ +V  A+ RAT+II  + +++  L + LI++ET++GE F  L
Sbjct: 600 ARIDREIQAIVTAAHQRATRIIEENRNLMDLLVDALIDQETIEGEHFRQL 649

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>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 614

 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 39/108 (36%), Positives = 68/108 (62%)
 Frame = -2

Query: 513 VTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADI 334
           VT GA++D  QV+ +ARQMV +FG SK +G + + +S    F+G+ +  + + S      
Sbjct: 503 VTIGAANDIKQVTFMARQMVTKFGMSK-VGPICLENSSSEVFIGRDLMGRHELSEEMVAK 561

Query: 333 VDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 190
           VD EVR +++  Y +A  I++ +  ++ R+ N L+EKET++ +EFM +
Sbjct: 562 VDLEVRSILKDCYIQARTILSQNRKLIDRVVNELVEKETIEAKEFMRI 609

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>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 72.0 bits (175), Expect = 9e-13
 Identities = 43/112 (38%), Positives = 67/112 (59%)
 Frame = -2

Query: 510 TTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIV 331
           TTGAS+DF Q +++AR MV  +G S+K+G V     G +  LG Q S QK  S  TA  +
Sbjct: 519 TTGASNDFEQATQMARAMVTEYGMSEKLGPVQY--EGNHAMLGAQ-SPQKSISEQTAYEI 575

Query: 330 DAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 175
           D EVR L+  A ++A +II ++ +    +A  L++ ET+D  +  +L+  G+
Sbjct: 576 DEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQIKALYETGK 627

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>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 72.0 bits (175), Expect = 9e-13
 Identities = 43/112 (38%), Positives = 67/112 (59%)
 Frame = -2

Query: 510 TTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIV 331
           TTGAS+DF Q +++AR MV  +G S+K+G V     G +  LG Q S QK  S  TA  +
Sbjct: 519 TTGASNDFEQATQMARAMVTEYGMSEKLGPVQY--EGNHAMLGAQ-SPQKSISEQTAYEI 575

Query: 330 DAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 175
           D EVR L+  A ++A +II ++ +    +A  L++ ET+D  +  +L+  G+
Sbjct: 576 DEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQIKALYETGK 627

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>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 634

 Score = 69.3 bits (168), Expect = 6e-12
 Identities = 39/112 (34%), Positives = 64/112 (57%)
 Frame = -2

Query: 522 QDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMAT 343
           +D +TTGA +D  + + +A +MV  +G S K+G +AI     NPFLG  M++  D S   
Sbjct: 486 KDGITTGAENDLQRATDLAYRMVSMWGMSDKVGPIAIRRVA-NPFLGG-MTTAVDTSPDL 543

Query: 342 ADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLF 187
              +D EV+ ++   Y +A  I+  + + L  +   L+EKET+  EEF+ +F
Sbjct: 544 LREIDEEVKRIITEQYEKAKAIVEEYKEPLKAVVKKLLEKETITCEEFVEVF 595

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>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4)
          Length = 715

 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 37/115 (32%), Positives = 63/115 (54%)
 Frame = -2

Query: 519 DNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATA 340
           D++TTGASSDF   +++A++MV +FG S+K+G +    +G               S  T 
Sbjct: 610 DHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTG-------------KLSPETQ 656

Query: 339 DIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 175
             ++ E+R L+  +Y RA  I+ TH      LA  L+  ET+D +E + + ++G+
Sbjct: 657 SAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLTYETLDAKE-IQIVLEGK 710

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>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1)
          Length = 715

 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 37/115 (32%), Positives = 63/115 (54%)
 Frame = -2

Query: 519 DNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATA 340
           D++TTGASSDF   +++A++MV +FG S+K+G +    +G               S  T 
Sbjct: 610 DHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTG-------------KLSPETQ 656

Query: 339 DIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 175
             ++ E+R L+  +Y RA  I+ TH      LA  L+  ET+D +E + + ++G+
Sbjct: 657 SAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLTYETLDAKE-IQIVLEGK 710

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>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4) (Presenilin-associated metalloprotease)
           (PAMP)
          Length = 773

 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 37/115 (32%), Positives = 63/115 (54%)
 Frame = -2

Query: 519 DNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATA 340
           D++TTGASSDF   +++A++MV +FG S+K+G +    +G               S  T 
Sbjct: 668 DHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTG-------------KLSPETQ 714

Query: 339 DIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 175
             ++ E+R L+  +Y RA  I+ TH      LA  L+  ET+D +E + + ++G+
Sbjct: 715 SAIEQEIRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAKE-IQIVLEGK 768

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>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)|
          Length = 663

 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 37/108 (34%), Positives = 64/108 (59%)
 Frame = -2

Query: 513 VTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADI 334
           +TTGA  D  +V++ A   + +FG S+K+GQV+       P  G+ M  +K YS ATA +
Sbjct: 508 ITTGAQDDLRKVTQSAYAQIVQFGMSEKLGQVSFDF----PRQGETMV-EKPYSEATAQL 562

Query: 333 VDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 190
           +D EVR LV +AY+R  +++    + + ++   L+EKE ++  + + L
Sbjct: 563 IDEEVRCLVRSAYNRTLELLTQCREQVEKVGRRLLEKEVLEKADMIEL 610

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>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like|
           protein)
          Length = 797

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 37/108 (34%), Positives = 61/108 (56%)
 Frame = -2

Query: 513 VTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADI 334
           +TTGA  D  +V++ A   + +FG ++K+GQ++       P  G  M  +K YS ATA +
Sbjct: 642 ITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDL----PRQGD-MVLEKPYSEATARL 696

Query: 333 VDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 190
           +D EVR L+  AY R   ++      + ++A LL+EKE +D  + + L
Sbjct: 697 IDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVEL 744

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>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein|
           AFG3 (EC 3.4.24.-) (TAT-binding homolog 10)
          Length = 761

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 34/109 (31%), Positives = 60/109 (55%)
 Frame = -2

Query: 516 NVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATAD 337
           +VT+GA  DF +V+++A  MV   G S KIG ++   + GN          K +S  TA 
Sbjct: 626 SVTSGAHDDFKKVTQMANAMVTSLGMSPKIGYLSFDQNDGN------FKVNKPFSNKTAR 679

Query: 336 IVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 190
            +D EV+ +V+ A+   T+++  ++D +  +A  L+ KE +  E+ + L
Sbjct: 680 TIDLEVKSIVDDAHRACTELLTKNLDKVDLVAKELLRKEAITREDMIRL 728

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>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)|
          Length = 802

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 37/108 (34%), Positives = 61/108 (56%)
 Frame = -2

Query: 513 VTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADI 334
           +TTGA  D  +V++ A   + +FG ++K+GQ++       P  G  M  +K YS ATA +
Sbjct: 641 ITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDL----PRQGD-MVLEKPYSEATARM 695

Query: 333 VDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 190
           +D EVR L+  AY R   ++      + ++A LL+EKE +D  + + L
Sbjct: 696 IDDEVRILISDAYRRTVALLTEKKADVEKVALLLLEKEVLDKNDMVQL 743

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>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 725

 Score = 62.4 bits (150), Expect = 7e-10
 Identities = 32/107 (29%), Positives = 62/107 (57%)
 Frame = -2

Query: 522 QDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMAT 343
           ++N++TGAS D  + +++AR+MV  +G S  +G +       NPFLG+   S+  +    
Sbjct: 542 KENISTGASDDISRATKIARKMVTEWGMS-ALGPIKYEEDTENPFLGRDY-SKGTFGSKM 599

Query: 342 ADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEE 202
           A  +D E+R+++  +   A + I  ++++L  + + L+E ET+  EE
Sbjct: 600 AHEIDLEIRKIISASEEIAIKAIEQNLELLELIKDSLLENETIVAEE 646

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>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)|
          Length = 795

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 34/110 (30%), Positives = 60/110 (54%)
 Frame = -2

Query: 519 DNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATA 340
           + VT+GA  D  +V+R+A  MV++FG +  IG ++   +      G     ++ +S    
Sbjct: 641 NEVTSGAQDDLRKVTRIAYSMVKQFGMAPGIGPISFPEAQE----GLMGIGRRPFSQGLQ 696

Query: 339 DIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 190
            ++D E R LV  AY    +++  ++D L  LAN L+EKE ++ E+  +L
Sbjct: 697 QMMDHEARLLVAKAYRHTEKVLQDNLDKLQALANALLEKEVINYEDIEAL 746

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>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein|
           RCA1 (EC 3.4.24.-) (TAT-binding homolog 12)
          Length = 825

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 35/109 (32%), Positives = 59/109 (54%)
 Frame = -2

Query: 516 NVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATAD 337
           +VT+GAS DF +V+ +A  MV   G S KIG V       N          K +S  T D
Sbjct: 681 SVTSGASDDFKKVTSMATAMVTELGMSDKIGWV-------NYQKRDDSDLTKPFSDETGD 733

Query: 336 IVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 190
           I+D+EV  +V+  + R T+++    + + ++A +L++KE +  E+ + L
Sbjct: 734 IIDSEVYRIVQECHDRCTKLLKEKAEDVEKIAQVLLKKEVLTREDMIDL 782

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>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 676

 Score = 59.7 bits (143), Expect = 5e-09
 Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 4/119 (3%)
 Frame = -2

Query: 519 DNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQ----KDYS 352
           D VTTGA+ D  + +++A QMV+ FG S K+G           F  Q   S      D +
Sbjct: 531 DKVTTGAADDLSKATQLAVQMVKVFGMSDKVGL--------RDFTAQDNESALVKVSDLA 582

Query: 351 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 175
             TA+++DAE+  +++ +Y RA  I+ T       LA  L+E ET+  +E +   I GQ
Sbjct: 583 PQTAELIDAEINRVLQESYKRAKVILETKKKEHQLLAEALLEYETLSADE-VKRVISGQ 640

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>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 609

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 30/105 (28%), Positives = 56/105 (53%)
 Frame = -2

Query: 513 VTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADI 334
           V+TGA +D  + + + R+M+  +G S+K   VA+   G       Q++  ++YS  T   
Sbjct: 472 VSTGAGNDISRATDIVRKMITDYGMSEKFQNVALTRRGTGYLAEPQLA--REYSECTQQY 529

Query: 333 VDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEF 199
           VD EV  ++   Y     ++    ++L  +A  L+E+ET++ +EF
Sbjct: 530 VDEEVARVLAERYRAVVALLTEKKELLEYIATRLLERETIERDEF 574

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>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 709

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 37/100 (37%), Positives = 55/100 (55%)
 Frame = -2

Query: 513 VTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADI 334
           +TTGASSDF + + +AR MV + G S K+GQV    S G    G ++ S++     TA  
Sbjct: 562 ITTGASSDFYKATNIARAMVTQLGMS-KLGQVQYVPSQGTVPPGTKLFSEQ-----TAKD 615

Query: 333 VDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETV 214
           +D E+  ++E  Y +A  II T+   L  L   L+  ET+
Sbjct: 616 IDFEINAIIEEQYKKARTIIKTNRKELELLVEALLIAETI 655

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>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 702

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 38/100 (38%), Positives = 54/100 (54%)
 Frame = -2

Query: 513 VTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADI 334
           +TTGASSDF + + +AR MV + G S K+GQV        P  G   S+ K YS  TA  
Sbjct: 565 ITTGASSDFYKATNIARAMVTQLGMS-KLGQVQY-----VPSQGTLPSNVKLYSEQTAKD 618

Query: 333 VDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETV 214
           +D E+  ++E  Y +A  II ++   L  L   L+  ET+
Sbjct: 619 IDNEINFIIEEQYKKAKTIIKSNRKELELLVEALLIAETI 658

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>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1|
           protein)
          Length = 747

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 36/107 (33%), Positives = 53/107 (49%)
 Frame = -2

Query: 522 QDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMAT 343
           +DN T+G  SD    +  AR MV ++G S  +G V +  +             + +S   
Sbjct: 608 KDNTTSGCGSDLQSATGTARAMVTQYGMSDDVGPVNLSENW------------ESWSNKI 655

Query: 342 ADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEE 202
            DI D EV EL++ +  RA +++      LHRLA  LIE ET+D  E
Sbjct: 656 RDIADNEVIELLKDSEERARRLLTKKNVELHRLAQGLIEYETLDAHE 702

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>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 662

 Score = 55.5 bits (132), Expect = 9e-08
 Identities = 33/110 (30%), Positives = 57/110 (51%)
 Frame = -2

Query: 519 DNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATA 340
           D VT GA+ DF + + +A+ MV+RFGFS KIG   I             +  +    AT 
Sbjct: 494 DKVTNGAADDFRKATILAQNMVKRFGFSSKIGPRVIPD-----------TQDEQLGEATR 542

Query: 339 DIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 190
           D++D EV +L+  + +R   ++++       LA  L+  ET+  +E +++
Sbjct: 543 DLIDKEVDQLLNDSLTRVRTLLSSQSKQHKLLAEALLHFETLTKDEVLAV 592

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>TSG6_MOUSE (O08859) Tumor necrosis factor-inducible protein TSG-6 precursor|
           (TNF-stimulated gene 6 protein)
          Length = 275

 Score = 32.7 bits (73), Expect = 0.62
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +2

Query: 29  VHFYKELYKHVCKNNIFTRSMWFLQAGPSYNRRKHTGHDGATYATNSSAC 178
           V  ++E +    KN IF  S+W  QA   Y+R    G    TYA   + C
Sbjct: 9   VLLWEEAHGWGFKNGIFHNSIWLEQAAGVYHREARAGRYKLTYAEAKAVC 58

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>TSG6_RABIT (P98065) Tumor necrosis factor-inducible protein TSG-6 precursor|
           (TNF-stimulated gene 6 protein) (Hyaluronate-binding
           protein PS4)
          Length = 276

 Score = 32.3 bits (72), Expect = 0.81
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2

Query: 65  KNNIFTRSMWFLQAGPSYNRRKHTGHDGATYATNSSAC 178
           KN IF  S+W  QA   Y+R   +G    TYA   + C
Sbjct: 21  KNGIFHNSIWLEQAAGVYHREARSGKYKLTYAEAKAVC 58

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>CTF1A_FUSSO (P52958) Cutinase transcription factor 1 alpha|
          Length = 909

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 4/116 (3%)
 Frame = -2

Query: 345 TADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQAEL 166
           +AD+V   + E V  + +R T++ N  IDILH+    L+    +          D   + 
Sbjct: 208 SADVVHYPLPENVRGSRARLTELDNVEIDILHQRGAFLLPPRAL---------CDELIDA 258

Query: 165 FVA*VAPSCPVC----FRRLYEGPACRNHIDLVKMLFLQTCLYSSL*KCTDTECVE 10
           + + V P  PV     F R Y  P      +   +L LQ+ L +    C + + ++
Sbjct: 259 YFSWVHPIVPVINRTRFMRQYRDPK-----NPPSLLLLQSVLLAGTRACNNAQLMD 309

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>GLND_METCA (Q60BB2) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 877

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +3

Query: 30  YIFTRNYTNMFAKTTFLLDQCGSYKLDPRITA 125
           +I+ RN   +FA+TT +LDQ G   LD +I A
Sbjct: 698 FIYERNRDFLFAQTTAVLDQLGLTVLDAKIIA 729

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>CK016_MOUSE (Q9JJR6) Protein C11orf16 homolog|
          Length = 402

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +2

Query: 398 PPDDPIATCPIFLLNPNLSTICLATRET----CMKSLDAPVVTLSW 523
           PP D   TCP     P L+T C  TR T    C+ ++D P   L W
Sbjct: 31  PPWDMSFTCPFATQAPWLATHCTFTRCTACCPCLHTVDRPWPGLRW 76

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>CH601_CORDI (Q6NJ37) 60 kDa chaperonin 1 (Protein Cpn60 1) (groEL protein 1)|
          Length = 539

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -2

Query: 522 QDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNP 391
           Q+ V  G  S  +Q+S+  R+  + F    KIG +A+ ++   P
Sbjct: 406 QEGVIAGGGSALVQISKELREFAQEFEGDAKIGVIALANALAKP 449

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>YEA8_SCHPO (O14073) Putative dipeptidyl aminopeptidase C2E11.08 (EC 3.4.14.-)|
          Length = 793

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -1

Query: 517 QRDNWGIQRLHAGLTCRQTNG*KIWVQQEDRASCDWVIWWKP 392
           ++++  +QRL    T    NG   W+ +E+  S    IWW P
Sbjct: 194 RKNDGNVQRLTYDGTVDVFNGLTDWIYEEEVLSSPSTIWWSP 235

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>CR023_HUMAN (Q8NB54) Protein C18orf23|
          Length = 160

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -3

Query: 167 CLSHKSPRHALYVFGGYTRVQLVGTTLI**KCCFCKHVCIVPCK 36
           C +H +PR+ L +   YT  + +G  +     C C +VC+  C+
Sbjct: 33  CPAHPAPRNCLCMTVAYTGSRCLGACVC---VCVCLYVCVHVCE 73

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>DDC_HUMAN (P20711) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)|
           (DOPA decarboxylase) (DDC)
          Length = 480

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
 Frame = +2

Query: 98  LQAGPSYNRRKHTGHDGATYATNSSACPSMKRLMNSSPSTVSFSIR----RLASLWRMSM 265
           L+ GP  N+     H  A YA ++  CP  + L+N      SF+       L +    +M
Sbjct: 255 LEVGPICNKEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAM 314

Query: 266 WV 271
           WV
Sbjct: 315 WV 316

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>TSG6_HUMAN (P98066) Tumor necrosis factor-inducible protein TSG-6 precursor|
           (TNF-stimulated gene 6 protein) (Hyaluronate-binding
           protein)
          Length = 277

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 65  KNNIFTRSMWFLQAGPSYNRRKHTGHDGATYATNSSAC 178
           K+ IF  S+W  +A   Y+R   +G    TYA   + C
Sbjct: 21  KDGIFHNSIWLERAAGVYHREARSGKYKLTYAEAKAVC 58

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>AROA_LISIN (Q92A85) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)|
           (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP
           synthase) (EPSPS)
          Length = 428

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -2

Query: 459 MVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIV 331
           M+ +FG   ++  + I   GG  F+GQ+M+   D S A   IV
Sbjct: 199 MIRQFGGEIEMDGLTIRVKGGQKFIGQEMTVPGDVSSAAFFIV 241

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>ARGJ_METAC (Q8TK55) Arginine biosynthesis bifunctional protein argJ [Includes:|
           Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine
           acetyltransferase) (Ornithine transacetylase) (OATase);
           Amino-acid acetyltransferase (EC 2.3.1.1)
           (N-acetylglutamate syn
          Length = 395

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 15/70 (21%), Positives = 32/70 (45%)
 Frame = -2

Query: 501 ASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIVDAE 322
           A+   M   +  +++        +IG +A GS    P +G  +      ++  AD++DA 
Sbjct: 140 AAKAIMTTDKALKEVAVELDCGVRIGAIAKGSGMIEPNMGTMLCFAYTDALVPADVLDAA 199

Query: 321 VRELVETAYS 292
           +R  V+  ++
Sbjct: 200 LRIAVDKTFN 209


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,760,655
Number of Sequences: 219361
Number of extensions: 1199866
Number of successful extensions: 3750
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 3641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3723
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3985467738
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result