Clone Name | rbah63k20 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009112.1| Triticum aestivum clone wl1.pk0008.c2:fis, full insert mRNA sequence Length = 654 Score = 789 bits (398), Expect = 0.0 Identities = 498/529 (94%), Gaps = 8/529 (1%) Strand = Plus / Minus Query: 2 tgtattaattcgacgcactcagtgtcagtaca----tttttacaaggaactatacaaaca 57 ||||||||| || ||| ||||||||||||||| |||||||||||||||||||||||| Sbjct: 615 tgtattaat-cggcgcgctcagtgtcagtacaggcatttttacaaggaactatacaaaca 557 Query: 58 tgtttgcaaaaacaacatttttactagatcaatgtggttcctacaagctggaccctcgta 117 ||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 556 tgtttgcggaaagaacatttttactagatcaatgtggttcctacaacttggaccctcgta 497 Query: 118 taaccgccgaaaacatacagggcatgacggggcgacttatgcgacaaacagctccgcctg 177 ||| | | ||||||||||| |||| ||| | ||||||||||||| |||||||| ||||| Sbjct: 496 taatcacggaaaacatacaaggcacgacaagtcgacttatgcgacgaacagctctgcctg 437 Query: 178 cccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 cccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 377 Query: 238 gttggcgagcctgtggaggatgtcgatgtgggtgttgatgatctgcgtcgcccgcgagta 297 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 376 gttggcgagcctgtggaggatatcgatgtgggtgttgatgatctgcgtcgcccgcgagta 317 Query: 298 ggccgtctccacgagttccctgacctcggcatctacgatgtccgccgtggccatcgagta 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 316 ggccgtctccacgagttccctgacctcggcatctacgatgtccgccgtggccatcgagta 257 Query: 358 gtccttctggctcgacatctgctggcccaagaaagggttt---ccaccagatgacccaat 414 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 256 gtccttctggctcgacatctgctggcccaagaaagggtttccaccaccagatgacccgat 197 Query: 415 cgcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacg 474 || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 tgcgacttgcccaatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacg 137 Query: 475 tgagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttgg 523 ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 136 tgagacctgcatgaagtcgctggatgccccagttgtcacattgtcttgg 88
>gb|BT009457.1| Triticum aestivum clone wlp1c.pk007.f6:fis, full insert mRNA sequence Length = 1556 Score = 769 bits (388), Expect = 0.0 Identities = 500/533 (93%), Gaps = 12/533 (2%) Strand = Plus / Minus Query: 2 tgtattaattcgacgcactcagtgtcagtaca-----tttttacaaggaactatacaaac 56 |||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| Sbjct: 1524 tgtattaatt-gacgcgctcagtgtcagtacaggtattttttacaaggaactatacaaac 1466 Query: 57 atgtttgcaaaaacaacattttt-actagatcaatgtggttcctacaagctggaccctcg 115 |||||||| |||| ||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 1465 atgtttgcgaaaagaacattttttactagatcaatgtggttcctacaagttggaccctcg 1406 Query: 116 tataaccgccgaaaa-catacagggcatg----acggggcgacttatgcgacaaacagct 170 ||||| | || |||| ||||||||||| | || | ||||||||||||| ||||||| Sbjct: 1405 tataatcaccaaaaaacatacagggcacgcacgacaagtcgacttatgcgacgaacagct 1346 Query: 171 ccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcga 230 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1345 ctgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcga 1286 Query: 231 tcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatgatctgcgtcgccc 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1285 tcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatgatctgcgtcgccc 1226 Query: 291 gcgagtaggccgtctccacgagttccctgacctcggcatctacgatgtccgccgtggcca 350 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1225 gcgagtaggccgtctccacgagttccctgacctcggcgtctacgatgtccgccgtggcca 1166 Query: 351 tcgagtagtccttctggctcgacatctgctggcccaagaaagggtttccaccagatgacc 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1165 tcgagtagtccttctggctcgacatctgctggcccaagaaagggtttccaccagatgatc 1106 Query: 411 caatcgcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcga 470 | ||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1105 cgatcgcgacttgcccaatcttcttactgaacccaaatctttcaaccatttgtctggcga 1046 Query: 471 cacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttgg 523 |||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 1045 cacgtgagacctgcatgaagtcactggatgccccagttgtcacattgtcttgg 993
>gb|BT009148.1| Triticum aestivum clone wl1n.pk0059.g7:fis, full insert mRNA sequence Length = 890 Score = 729 bits (368), Expect = 0.0 Identities = 462/491 (94%), Gaps = 8/491 (1%) Strand = Plus / Minus Query: 34 tttttacaaggaa-ctatacaaacatgtttgcaaaaacaacatttttactagatcaatgt 92 ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 814 tttttacaaggaaactatacaaacatgtttgcgaaaagaacatttttactagatcaatgt 755 Query: 93 ggttcctacaagctggaccctcgtataaccgccgaaaa-catacagggcatgacggggcg 151 |||||||||||| ||||||||||| ||| | ||||||| |||||||| || | | Sbjct: 754 ggttcctacaagttggaccctcgtgtaatcaccgaaaaacatacagg------cgagttg 701 Query: 152 acttatgcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccg 211 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 700 acttatgcgacgaacagctctgcctgcccgtcgatgaagaggctcatgaactcctccccg 641 Query: 212 tccacggtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtg 271 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 640 tccacggtctccttctcgatgaggaggttggcgagcctgtggaggatgtcgatgtgggtg 581 Query: 272 ttgatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatct 331 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 580 ttgatgatctgcgtcgcgcgcgagtaggccgtctccacgagttccctgacctcggcgtct 521 Query: 332 acgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaa 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 acgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaa 461 Query: 392 gggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctt 451 |||||||||||||||||||| || || |||||||| |||||||||||||||||||| ||| Sbjct: 460 gggtttccaccagatgacccgatggcgacttgcccaatcttcttgctgaacccaaacctt 401 Query: 452 tcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtc 511 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 400 tcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccggttgtc 341 Query: 512 acgttgtcttg 522 || |||||||| Sbjct: 340 acattgtcttg 330
>dbj|AK065019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F19, full insert sequence Length = 2378 Score = 377 bits (190), Expect = e-101 Identities = 322/366 (87%) Strand = Plus / Minus Query: 158 gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 217 |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct: 2093 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 2034 Query: 218 gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 277 ||||||||||| ||||| || | || ||| ||||||||||||||||||| || ||||| Sbjct: 2033 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 1974 Query: 278 atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 337 |||||||| || | ||||||||| |||||||||| ||||| ||||| ||||| || | Sbjct: 1973 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 1914 Query: 338 tccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaagggttt 397 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1913 tccgcggtggccatcgagtagtccttctggctcgacatctgctggcccaagaaaggattt 1854 Query: 398 ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaacc 457 ||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1853 ccaccaggtccaccaatcgcaacttgcccgatcttcttgctgaatccaaatctttcaacc 1794 Query: 458 atttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttg 517 |||||||| || |||||||| |||||||| || ||| |||| |||||||||||||| || Sbjct: 1793 atttgtcttgcaacacgtgaaacctgcataaaatcgttggaggccccagttgtcacattt 1734 Query: 518 tcttgg 523 |||||| Sbjct: 1733 tcttgg 1728
>dbj|AK061771.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C10, full insert sequence Length = 1325 Score = 377 bits (190), Expect = e-101 Identities = 322/366 (87%) Strand = Plus / Minus Query: 158 gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 217 |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct: 1149 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 1090 Query: 218 gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 277 ||||||||||| ||||| || | || ||| ||||||||||||||||||| || ||||| Sbjct: 1089 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 1030 Query: 278 atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 337 |||||||| || | ||||||||| |||||||||| ||||| ||||| ||||| || | Sbjct: 1029 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 970 Query: 338 tccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaagggttt 397 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 969 tccgcggtggccatcgagtagtccttctggctcgacatctgctggcccaagaaaggattt 910 Query: 398 ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaacc 457 ||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 909 ccaccaggtccaccaatcgcaacttgcccgatcttcttgctgaatccaaatctttcaacc 850 Query: 458 atttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttg 517 |||||||| || |||||||| |||||||| || ||| |||| |||||||||||||| || Sbjct: 849 atttgtcttgcaacacgtgaaacctgcataaaatcgttggaggccccagttgtcacattt 790 Query: 518 tcttgg 523 |||||| Sbjct: 789 tcttgg 784
>gb|AY103957.1| Zea mays PCO116832 mRNA sequence Length = 1820 Score = 353 bits (178), Expect = 4e-94 Identities = 319/366 (87%) Strand = Plus / Minus Query: 158 gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 217 |||||||||||||| ||||| ||||| ||||| | ||||||||||||||||||||||||| Sbjct: 1445 gcgacaaacagctcggcctggccgtcaatgaacaagctcatgaactcctccccgtccacg 1386 Query: 218 gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 277 |||||||||||||||||||| | ||||||| ||||||||||||||||||| ||| |||| Sbjct: 1385 gtctccttctcgatcaggagctgggcgagcttgtggaggatgtcgatgtgcgtggtgatt 1326 Query: 278 atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 337 |||||| | || | ||||||||| |||||||||||||||| |||||||| || || | Sbjct: 1325 atctgccttgctctagagtaggccttctccacgagttccctcacctcggcgtccacaaca 1266 Query: 338 tccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaagggttt 397 ||||| || ||||| ||||||||||||||||| |||||||| || ||||||||||||||| Sbjct: 1265 tccgctgttgccatagagtagtccttctggcttgacatctgttgccccaagaaagggttt 1206 Query: 398 ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaacc 457 ||||| | | ||| ||||||||||| ||||||||||| ||||| ||||||||||| ||| Sbjct: 1205 ccacccggtcccccgatcgcaacttggccgatcttcttactgaatccaaatctttcgacc 1146 Query: 458 atttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttg 517 || || || ||||||||||| || |||||||||||| |||| || || |||||||||||| Sbjct: 1145 atctgccttgcgacacgtgacacttgcatgaagtcgttggaagctcctgttgtcacgttg 1086 Query: 518 tcttgg 523 |||||| Sbjct: 1085 tcttgg 1080 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atgtggttcctacaagctgg 108 |||||||||||||||||||| Sbjct: 1545 atgtggttcctacaagctgg 1526
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 210 bits (106), Expect = 3e-51 Identities = 193/222 (86%) Strand = Plus / Plus Query: 158 gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 217 |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct: 30354728 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 30354787 Query: 218 gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 277 ||||||||||| ||||| || | || ||| ||||||||||||||||||| || ||||| Sbjct: 30354788 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 30354847 Query: 278 atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 337 |||||||| || | ||||||||| |||||||||| ||||| ||||| ||||| || | Sbjct: 30354848 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 30354907 Query: 338 tccgccgtggccatcgagtagtccttctggctcgacatctgc 379 ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 30354908 tccgcggtggccatcgagtagtccttctggctcgacatctgc 30354949 Score = 174 bits (88), Expect = 2e-40 Identities = 133/148 (89%) Strand = Plus / Plus Query: 376 ctgctggcccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttctt 435 |||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| Sbjct: 30359326 ctgctggcccaagaaaggatttccaccaggtccaccaatcgcaacttgcccgatcttctt 30359385 Query: 436 gctgaacccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgct 495 |||||| ||||||||||||||||||||||| || |||||||| |||||||| || ||| | Sbjct: 30359386 gctgaatccaaatctttcaaccatttgtcttgcaacacgtgaaacctgcataaaatcgtt 30359445 Query: 496 ggatgccccagttgtcacgttgtcttgg 523 ||| |||||||||||||| || |||||| Sbjct: 30359446 ggaggccccagttgtcacattttcttgg 30359473 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 catgtttgcaaaaacaacat 75 |||||||||||||||||||| Sbjct: 15678432 catgtttgcaaaaacaacat 15678451
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 210 bits (106), Expect = 3e-51 Identities = 193/222 (86%) Strand = Plus / Plus Query: 158 gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 217 |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct: 101323 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 101382 Query: 218 gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 277 ||||||||||| ||||| || | || ||| ||||||||||||||||||| || ||||| Sbjct: 101383 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 101442 Query: 278 atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 337 |||||||| || | ||||||||| |||||||||| ||||| ||||| ||||| || | Sbjct: 101443 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 101502 Query: 338 tccgccgtggccatcgagtagtccttctggctcgacatctgc 379 ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 101503 tccgcggtggccatcgagtagtccttctggctcgacatctgc 101544 Score = 174 bits (88), Expect = 2e-40 Identities = 133/148 (89%) Strand = Plus / Plus Query: 376 ctgctggcccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttctt 435 |||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| Sbjct: 105921 ctgctggcccaagaaaggatttccaccaggtccaccaatcgcaacttgcccgatcttctt 105980 Query: 436 gctgaacccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgct 495 |||||| ||||||||||||||||||||||| || |||||||| |||||||| || ||| | Sbjct: 105981 gctgaatccaaatctttcaaccatttgtcttgcaacacgtgaaacctgcataaaatcgtt 106040 Query: 496 ggatgccccagttgtcacgttgtcttgg 523 ||| |||||||||||||| || |||||| Sbjct: 106041 ggaggccccagttgtcacattttcttgg 106068
>dbj|AB017480.2| Nicotiana tabacum mRNA for chloroplast FtsH protease, complete cds Length = 2447 Score = 87.7 bits (44), Expect = 3e-14 Identities = 143/176 (81%) Strand = Plus / Minus Query: 347 gccatcgagtagtccttctggctcgacatctgctggcccaagaaagggtttccaccagat 406 ||||| |||||||| |||||| | |||||||| || || | |||||| ||||| ||| | Sbjct: 1952 gccatggagtagtctttctgggttgacatctgttgacctaggaaaggatttcctccacct 1893 Query: 407 gacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctg 466 ||||| |||||||| || ||||| ||||||||||| ||||| |||||||| || || Sbjct: 1892 cctccaatggcaacttgtccaatctttttgctgaaccctaatctctcaaccatctgcctt 1833 Query: 467 gcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttg 522 || || ||||| || |||||||| ||| | |||||||||||||| ||||| ||||| Sbjct: 1832 gccactcgtgaaacttgcatgaaatcgttagatgccccagttgttacgttatcttg 1777
>emb|X90472.1|CAATPASE C.annuum mRNA for ATPase protein Length = 1989 Score = 77.8 bits (39), Expect = 3e-11 Identities = 141/175 (80%) Strand = Plus / Minus Query: 347 gccatcgagtagtccttctggctcgacatctgctggcccaagaaagggtttccaccagat 406 ||||| ||||||||||||||| | |||||||| ||||| | |||||||||||| ||| | Sbjct: 1864 gccatggagtagtccttctgggttgacatctgttggcctaggaaagggtttcctccacct 1805 Query: 407 gacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctg 466 || || |||||||| || ||||| |||||||| || ||||| |||||||| || || Sbjct: 1804 cctccgatggcaacttggcctatctttttgctgaaacctaatctctcaaccatctgcctc 1745 Query: 467 gcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttgtctt 521 || || ||||| || |||||||| || | ||||| ||||| || |||||||||| Sbjct: 1744 gccactcgtgaaacttgcatgaaatcattagatgcgccagtggttacgttgtctt 1690
>gb|AF332134.1| Medicago sativa FtsH protease (FtsH) mRNA, complete cds; chloroplast gene for chloroplast product Length = 2352 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 434 ttgctgaacccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtc 492 ||||||||||||||||| |||||||| ||||| || || ||||| || ||||||||||| Sbjct: 1893 ttgctgaacccaaatctctcaaccatctgtcttgccactcgtgaaacttgcatgaagtc 1835
>ref|NM_103909.3| Arabidopsis thaliana FTSH1; ATP-dependent peptidase/ ATPase/ metallopeptidase AT1G50250 (FTSH1) mRNA, complete cds Length = 2473 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 416 gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 475 |||||||| || ||||| ||||||||||||||||| |||| |||||| | || ||||| Sbjct: 2022 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1963 Query: 476 gagacctgcatgaa 489 || ||||||||||| Sbjct: 1962 gacacctgcatgaa 1949 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 179 ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 237 ||||| || ||||| ||||||||||| || ||||| || || || |||||||||||||| Sbjct: 2259 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2201
>gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genomic sequence, complete sequence Length = 100975 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 416 gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 475 |||||||| || ||||| ||||||||||||||||| |||| |||||| | || ||||| Sbjct: 62107 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 62048 Query: 476 gagacctgcatgaa 489 || ||||||||||| Sbjct: 62047 gacacctgcatgaa 62034 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 179 ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 237 ||||| || ||||| ||||||||||| || ||||| || || || |||||||||||||| Sbjct: 62432 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 62374
>emb|Y12780.1|ATAAAA A.thaliana mRNA for ATPase, partial Length = 2190 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 416 gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 475 |||||||| || ||||| ||||||||||||||||| |||| |||||| | || ||||| Sbjct: 1685 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1626 Query: 476 gagacctgcatgaa 489 || ||||||||||| Sbjct: 1625 gacacctgcatgaa 1612
>emb|X99808.1|ATFTSH A.thaliana mRNA for chloroplast FtsH protease Length = 2447 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 416 gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 475 |||||||| || ||||| ||||||||||||||||| |||| |||||| | || ||||| Sbjct: 2020 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1961 Query: 476 gagacctgcatgaa 489 || ||||||||||| Sbjct: 1960 gacacctgcatgaa 1947 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 179 ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 237 ||||| || ||||| ||||||||||| || ||||| || || || |||||||||||||| Sbjct: 2257 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2199
>gb|AY123034.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250) mRNA, complete cds Length = 2182 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 416 gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 475 |||||||| || ||||| ||||||||||||||||| |||| |||||| | || ||||| Sbjct: 1889 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1830 Query: 476 gagacctgcatgaa 489 || ||||||||||| Sbjct: 1829 gacacctgcatgaa 1816 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 179 ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 237 ||||| || ||||| ||||||||||| || ||||| || || || |||||||||||||| Sbjct: 2126 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2068
>gb|AY091095.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250) mRNA, complete cds Length = 2452 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 416 gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 475 |||||||| || ||||| ||||||||||||||||| |||| |||||| | || ||||| Sbjct: 1985 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1926 Query: 476 gagacctgcatgaa 489 || ||||||||||| Sbjct: 1925 gacacctgcatgaa 1912 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 179 ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 237 ||||| || ||||| ||||||||||| || ||||| || || || |||||||||||||| Sbjct: 2222 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2164
>ref|NM_123592.2| Arabidopsis thaliana VAR1 (VARIEGATED 1); ATP-dependent peptidase/ ATPase/ metallopeptidase AT5G42270 (VAR1) mRNA, complete cds Length = 3058 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 383 cccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaac 442 ||||||||||||||||| || | | |||| |||||||| || ||||| ||||||||| Sbjct: 2059 cccaagaaagggtttcctcctgctccaccaactgcaacttgtccaatctttttgctgaac 2000 Query: 443 ccaaatctttcaaccatttg 462 || ||||| ||||||||||| Sbjct: 1999 ccgaatctctcaaccatttg 1980
>gb|AY126987.1| Arabidopsis thaliana AT5g42270/K5J14_7 mRNA, complete cds Length = 2311 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 383 cccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaac 442 ||||||||||||||||| || | | |||| |||||||| || ||||| ||||||||| Sbjct: 1985 cccaagaaagggtttcctcctgctccaccaactgcaacttgtccaatctttttgctgaac 1926 Query: 443 ccaaatctttcaaccatttg 462 || ||||| ||||||||||| Sbjct: 1925 ccgaatctctcaaccatttg 1906
>dbj|AB023032.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K5J14 Length = 59762 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 383 cccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaac 442 ||||||||||||||||| || | | |||| |||||||| || ||||| ||||||||| Sbjct: 43337 cccaagaaagggtttcctcctgctccaccaactgcaacttgtccaatctttttgctgaac 43278 Query: 443 ccaaatctttcaaccatttg 462 || ||||| ||||||||||| Sbjct: 43277 ccgaatctctcaaccatttg 43258
>emb|BX815046.1|CNS0AE0R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS28ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2428 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 416 gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttg 462 |||||||| || ||||| ||||||||||||||||| |||| |||||| Sbjct: 2021 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttg 1975 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 179 ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 237 ||||| || ||||| ||||||||||| || ||||| || || || |||||||||||||| Sbjct: 2258 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2200
>emb|AL355537.11| Human DNA sequence from clone RP11-442O18 on chromosome 10 Contains three novel genes, complete sequence Length = 188728 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 58 tgtttgcaaaaacaacattttt 79 |||||||||||||||||||||| Sbjct: 113149 tgtttgcaaaaacaacattttt 113128
>gb|AC162693.5| Mus musculus chromosome 15, clone RP24-89G21, complete sequence Length = 159813 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 aggaactatacaaacatgttt 62 ||||||||||||||||||||| Sbjct: 121860 aggaactatacaaacatgttt 121840
>gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome Length = 1176248 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 gtacatttttacaaggaactataca 53 ||||||||||||||||||| ||||| Sbjct: 350178 gtacatttttacaaggaaccataca 350154
>gb|AC021667.21|AC021667 Mus musculus, clone RP23-304J12, complete sequence Length = 203106 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 aggaactatacaaacatgttt 62 ||||||||||||||||||||| Sbjct: 174774 aggaactatacaaacatgttt 174794
>gb|BT016970.1| Zea mays clone E04912707E08.c mRNA sequence Length = 202 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 158 gcgacaaacagctccgcctgcccgtcgatgaa 189 |||||||||||||| ||||| ||||| ||||| Sbjct: 162 gcgacaaacagctcggcctggccgtcaatgaa 193 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atgtggttcctacaagctgg 108 |||||||||||||||||||| Sbjct: 62 atgtggttcctacaagctgg 81
>gb|AC009395.7| Drosophila melanogaster clone BACR01D01, complete sequence Length = 189116 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 aggctcatgaactcctccccgtcc 214 |||||||||||||||||| ||||| Sbjct: 125479 aggctcatgaactcctcctcgtcc 125502
>gb|AE009134.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 160 of 256 of the complete sequence Length = 13735 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 cctgcccgtcgatgaagagg 193 |||||||||||||||||||| Sbjct: 470 cctgcccgtcgatgaagagg 489
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 aaaacaacatttttactaga 85 |||||||||||||||||||| Sbjct: 30045234 aaaacaacatttttactaga 30045215
>gb|AC130218.4| Mus musculus BAC clone RP23-121N18 from chromosome 18, complete sequence Length = 213673 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 gaagaggctcatgaactcct 206 |||||||||||||||||||| Sbjct: 81922 gaagaggctcatgaactcct 81903
>gb|AY094953.1| Drosophila melanogaster RH69586 full insert cDNA Length = 870 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 183 cgatgaagaggctcatgaactcctcccc 210 |||||||||||||||| ||||| ||||| Sbjct: 656 cgatgaagaggctcataaactcttcccc 683
>gb|AC144484.5| Medicago truncatula clone mth2-30o16, complete sequence Length = 121144 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 aaacatgtttgcaaaaacaa 72 |||||||||||||||||||| Sbjct: 40718 aaacatgtttgcaaaaacaa 40737
>gb|AC152818.17| Medicago truncatula clone mth2-85g12, complete sequence Length = 142154 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 aaacatgtttgcaaaaacaa 72 |||||||||||||||||||| Sbjct: 40721 aaacatgtttgcaaaaacaa 40740
>emb|AL513542.11| Human DNA sequence from clone RP11-129J12 on chromosome 10 Contains a novel gene and three CpG islands, complete sequence Length = 46619 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 tttacaaggaactatacaaa 55 |||||||||||||||||||| Sbjct: 44932 tttacaaggaactatacaaa 44951
>emb|AL353719.10| Human DNA sequence from clone RP11-85A1 on chromosome 10 Contains the NKX2-3 gene for NK2 transcription factor related, locus 3 (Drosophila), the gene for putative mitochondrial solute carrier (MRS3/4) and five CpG islands, complete sequence Length = 123160 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 tttacaaggaactatacaaa 55 |||||||||||||||||||| Sbjct: 313 tttacaaggaactatacaaa 332
>emb|AL096773.6|HS1000E10 Human DNA sequence from clone RP5-1000E10 on chromosome 1p12-13.3 Contains the 5' end of the gene for a novel protein (FLJ37099), the AMPD1 gene for adenosine monophosphate deaminase 1 (isoform M), the NRAS gene for neuroblastoma RAS viral (v-ras) oncogene homolog, the gene for NRAS-related gene (D1S155E) and the gene for a novel protein (FLJ44339), complete sequence Length = 140207 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 aatctttcaaccatttgtct 465 |||||||||||||||||||| Sbjct: 62486 aatctttcaaccatttgtct 62505
>emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete genome Length = 1512977 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 acatttttacaaggaactat 50 |||||||||||||||||||| Sbjct: 1065574 acatttttacaaggaactat 1065593
>emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome Length = 1499920 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 acatttttacaaggaactat 50 |||||||||||||||||||| Sbjct: 1057462 acatttttacaaggaactat 1057481
>emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, complete genome Length = 1516355 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 acatttttacaaggaactat 50 |||||||||||||||||||| Sbjct: 1086863 acatttttacaaggaactat 1086882
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 aaaacaacatttttactaga 85 |||||||||||||||||||| Sbjct: 62517 aaaacaacatttttactaga 62536
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 aaaacaacatttttactaga 85 |||||||||||||||||||| Sbjct: 52316 aaaacaacatttttactaga 52335
>ref|NM_169826.1| Drosophila melanogaster CG31224-RA (CG31224), mRNA Length = 7059 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 aggctcatgaactcctccccgtcc 214 |||||||||||||||||| ||||| Sbjct: 2447 aggctcatgaactcctcctcgtcc 2424
>ref|NM_078959.3| Drosophila melanogaster Peroxiredoxin 2540 CG11765-RA (Prx2540-2), mRNA Length = 868 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 183 cgatgaagaggctcatgaactcctcccc 210 |||||||||||||||| ||||| ||||| Sbjct: 657 cgatgaagaggctcataaactcttcccc 684
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 cctgcccgtcgatgaagagg 193 |||||||||||||||||||| Sbjct: 1766640 cctgcccgtcgatgaagagg 1766659
>gb|AY075377.1| Drosophila melanogaster LD06123 full length cDNA Length = 3188 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 aggctcatgaactcctccccgtcc 214 |||||||||||||||||| ||||| Sbjct: 2447 aggctcatgaactcctcctcgtcc 2424
>gb|AY070952.1| Drosophila melanogaster RE05093 full length cDNA Length = 870 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 183 cgatgaagaggctcatgaactcctcccc 210 |||||||||||||||| ||||| ||||| Sbjct: 655 cgatgaagaggctcataaactcttcccc 682
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 aaaacaacatttttactaga 85 |||||||||||||||||||| Sbjct: 52509 aaaacaacatttttactaga 52528
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 aaaacaacatttttactaga 85 |||||||||||||||||||| Sbjct: 33621256 aaaacaacatttttactaga 33621275
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 aaaacaacatttttactaga 85 |||||||||||||||||||| Sbjct: 18087307 aaaacaacatttttactaga 18087326
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 aaaacaacatttttactaga 85 |||||||||||||||||||| Sbjct: 30136656 aaaacaacatttttactaga 30136637
>gb|AC007398.6|AC007398 Drosophila melanogaster, chromosome 2R, region 47A-47B, BAC clone BACR20O22, complete sequence Length = 168567 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 183 cgatgaagaggctcatgaactcctcccc 210 |||||||||||||||| ||||| ||||| Sbjct: 77043 cgatgaagaggctcataaactcttcccc 77070
>gb|AC007812.6|AC007812 Drosophila melanogaster, chromosome 3R, region 91C-91C, BAC clone BACR01F15, complete sequence Length = 186989 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 aggctcatgaactcctccccgtcc 214 |||||||||||||||||| ||||| Sbjct: 35762 aggctcatgaactcctcctcgtcc 35785
>gb|BT003589.1| Drosophila melanogaster LD03662 full insert cDNA Length = 2508 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 aggctcatgaactcctccccgtcc 214 |||||||||||||||||| ||||| Sbjct: 1241 aggctcatgaactcctcctcgtcc 1218
>dbj|AP003520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021H10 Length = 142659 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 catgtttgcaaaaacaacat 75 |||||||||||||||||||| Sbjct: 14070 catgtttgcaaaaacaacat 14089
>gb|AC140071.4| Mus musculus BAC clone RP23-394K8 from 3, complete sequence Length = 203896 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 atacaaacatgtttgcaaaa 68 |||||||||||||||||||| Sbjct: 48422 atacaaacatgtttgcaaaa 48441
>emb|CR450802.8| Zebrafish DNA sequence from clone CH211-197I12 in linkage group 22, complete sequence Length = 186908 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tgcaaaaacaacatttttac 81 |||||||||||||||||||| Sbjct: 35478 tgcaaaaacaacatttttac 35459
>emb|AL772158.6| Zebrafish DNA sequence from clone CH211-128N21 in linkage group 22, complete sequence Length = 178046 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tgcaaaaacaacatttttac 81 |||||||||||||||||||| Sbjct: 29442 tgcaaaaacaacatttttac 29461
>emb|BX005362.6| Zebrafish DNA sequence from clone CH211-159C12 in linkage group 22, complete sequence Length = 178151 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tgcaaaaacaacatttttac 81 |||||||||||||||||||| Sbjct: 144817 tgcaaaaacaacatttttac 144836
>gb|AE003723.5| Drosophila melanogaster chromosome 3R, section 61 of 118 of the complete sequence Length = 255619 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 aggctcatgaactcctccccgtcc 214 |||||||||||||||||| ||||| Sbjct: 48507 aggctcatgaactcctcctcgtcc 48530
>gb|AE003829.4| Drosophila melanogaster chromosome 2R, section 21 of 73 of the complete sequence Length = 281782 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 183 cgatgaagaggctcatgaactcctcccc 210 |||||||||||||||| ||||| ||||| Sbjct: 55947 cgatgaagaggctcataaactcttcccc 55974
>dbj|AB100244.1| Penicillium camemberti pyrG gene for orotidine-5'-phosphate decarboxylase, complete cds Length = 2580 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 gaggatgtcgatgtgggtgttgat 276 |||||||||||||||||| ||||| Sbjct: 1353 gaggatgtcgatgtgggttttgat 1330
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 aaaacaacatttttactaga 85 |||||||||||||||||||| Sbjct: 18013628 aaaacaacatttttactaga 18013647
>emb|AL845343.5|CNS08CB5 Oryza sativa chromosome 12, . BAC OSJNBa0028O09 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155927 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 aaaacaacatttttactaga 85 |||||||||||||||||||| Sbjct: 40985 aaaacaacatttttactaga 41004
>emb|CR974592.5| Mouse DNA sequence from clone RP23-56C15 on chromosome 12, complete sequence Length = 201549 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 tttgcaaaaacaacattttt 79 |||||||||||||||||||| Sbjct: 20409 tttgcaaaaacaacattttt 20428
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 catcgagtagtccttctggc 368 |||||||||||||||||||| Sbjct: 2170771 catcgagtagtccttctggc 2170790
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 catcgagtagtccttctggc 368 |||||||||||||||||||| Sbjct: 970532 catcgagtagtccttctggc 970551 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,815,060 Number of Sequences: 3902068 Number of extensions: 3815060 Number of successful extensions: 76702 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76266 Number of HSP's gapped (non-prelim): 431 length of query: 523 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 500 effective length of database: 17,143,297,704 effective search space: 8571648852000 effective search space used: 8571648852000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)