Clone Name | rbah63k19 |
---|---|
Clone Library Name | barley_pub |
>gb|AY236227.1| Oryza sativa (indica cultivar-group) alanine aminotransferase mRNA, complete cds Length = 1558 Score = 404 bits (204), Expect = e-109 Identities = 345/392 (88%) Strand = Plus / Minus Query: 76 cccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaag 135 ||||||||| || || |||||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 1377 cccttctttttgtccgaaacctgaccctggaacagtggatattccagttgcttcaagaag 1318 Query: 136 cttgaggcagtagtaaacatcgggctctttgccagcgctttttgctacatccatagctct 195 ||||||||||||| ||||||||| | |||||||||| ||||| ||| |||| |||||| | Sbjct: 1317 cttgaggcagtagaaaacatcggccgctttgccagcccttttggctgcatctatagcttt 1258 Query: 196 ttgcggcaggcgtatttgcgggaaggaatacatagctccttctgtgaaattgcagacaac 255 | | || | ||||||||| ||||| || |||||||||||||||||||||||||||||||| Sbjct: 1257 tggtggtaagcgtatttgggggaaagagtacatagctccttctgtgaaattgcagacaac 1198 Query: 256 attgcggcaactattgaaaccgtctgtcattatttgtgccctcctcctcaaagattcaag 315 ||| ||||||||||||||||| |||||||| | |||| |||||||||||||| || || Sbjct: 1197 atttcggcaactattgaaaccatctgtcatcaggcgtgctctcctcctcaaagactcgag 1138 Query: 316 gatagacttactttcagcagaatacttcaggtacgagatgtctccaggtttaggagggtt 375 ||||||||| |||||||||||| ||||||| || ||||| |||||||| ||||||||||| Sbjct: 1137 gatagacttgctttcagcagaaaacttcagataagagatatctccaggcttaggagggtt 1078 Query: 376 caccataagccccatgaagatctgcccaggaacatttggactcagcgcgatcgatgcaac 435 ||||| | ||||| |||||||||||||||||||||||||| || ||||| |||||||| Sbjct: 1077 aaccattaaacccataaagatctgcccaggaacatttggactgagtgcgattgatgcaac 1018 Query: 436 cttgtaaatctcgtcgacagtcttgggaggaa 467 |||||| |||||||| || ||||||||||||| Sbjct: 1017 cttgtagatctcgtctactgtcttgggaggaa 986
>dbj|AK067732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118J02, full insert sequence Length = 1970 Score = 404 bits (204), Expect = e-109 Identities = 345/392 (88%) Strand = Plus / Minus Query: 76 cccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaag 135 ||||||||| || || |||||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 1426 cccttctttttgtccgaaacctgaccctggaacagtggatattccagttgcttcaagaag 1367 Query: 136 cttgaggcagtagtaaacatcgggctctttgccagcgctttttgctacatccatagctct 195 ||||||||||||| ||||||||| | |||||||||| ||||| ||| |||| |||||| | Sbjct: 1366 cttgaggcagtagaaaacatcggccgctttgccagcccttttggctgcatctatagcttt 1307 Query: 196 ttgcggcaggcgtatttgcgggaaggaatacatagctccttctgtgaaattgcagacaac 255 | | || | ||||||||| ||||| || |||||||||||||||||||||||||||||||| Sbjct: 1306 tggtggtaagcgtatttgggggaaagagtacatagctccttctgtgaaattgcagacaac 1247 Query: 256 attgcggcaactattgaaaccgtctgtcattatttgtgccctcctcctcaaagattcaag 315 ||| ||||||||||||||||| |||||||| | |||| |||||||||||||| || || Sbjct: 1246 atttcggcaactattgaaaccatctgtcatcaggcgtgctctcctcctcaaagactcgag 1187 Query: 316 gatagacttactttcagcagaatacttcaggtacgagatgtctccaggtttaggagggtt 375 ||||||||| |||||||||||| ||||||| || ||||| |||||||| ||||||||||| Sbjct: 1186 gatagacttgctttcagcagaaaacttcagataagagatatctccaggcttaggagggtt 1127 Query: 376 caccataagccccatgaagatctgcccaggaacatttggactcagcgcgatcgatgcaac 435 ||||| | ||||| |||||||||||||||||||||||||| || ||||| |||||||| Sbjct: 1126 aaccattaaacccataaagatctgcccaggaacatttggactgagtgcgattgatgcaac 1067 Query: 436 cttgtaaatctcgtcgacagtcttgggaggaa 467 |||||| |||||||| || ||||||||||||| Sbjct: 1066 cttgtagatctcgtctactgtcttgggaggaa 1035
>dbj|AK060835.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C09, full insert sequence Length = 1581 Score = 404 bits (204), Expect = e-109 Identities = 345/392 (88%) Strand = Plus / Minus Query: 76 cccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaag 135 ||||||||| || || |||||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 1195 cccttctttttgtccgaaacctgaccctggaacagtggatattccagttgcttcaagaag 1136 Query: 136 cttgaggcagtagtaaacatcgggctctttgccagcgctttttgctacatccatagctct 195 ||||||||||||| ||||||||| | |||||||||| ||||| ||| |||| |||||| | Sbjct: 1135 cttgaggcagtagaaaacatcggccgctttgccagcccttttggctgcatctatagcttt 1076 Query: 196 ttgcggcaggcgtatttgcgggaaggaatacatagctccttctgtgaaattgcagacaac 255 | | || | ||||||||| ||||| || |||||||||||||||||||||||||||||||| Sbjct: 1075 tggtggtaagcgtatttgggggaaagagtacatagctccttctgtgaaattgcagacaac 1016 Query: 256 attgcggcaactattgaaaccgtctgtcattatttgtgccctcctcctcaaagattcaag 315 ||| ||||||||||||||||| |||||||| | |||| |||||||||||||| || || Sbjct: 1015 atttcggcaactattgaaaccatctgtcatcaggcgtgctctcctcctcaaagactcgag 956 Query: 316 gatagacttactttcagcagaatacttcaggtacgagatgtctccaggtttaggagggtt 375 ||||||||| |||||||||||| ||||||| || ||||| |||||||| ||||||||||| Sbjct: 955 gatagacttgctttcagcagaaaacttcagataagagatatctccaggcttaggagggtt 896 Query: 376 caccataagccccatgaagatctgcccaggaacatttggactcagcgcgatcgatgcaac 435 ||||| | ||||| |||||||||||||||||||||||||| || ||||| |||||||| Sbjct: 895 aaccattaaacccataaagatctgcccaggaacatttggactgagtgcgattgatgcaac 836 Query: 436 cttgtaaatctcgtcgacagtcttgggaggaa 467 |||||| |||||||| || ||||||||||||| Sbjct: 835 cttgtagatctcgtctactgtcttgggaggaa 804
>gb|AY090542.1| Deschampsia antarctica clone Dacor 1.7 alanine aminotransferase mRNA, 3' UTR and partial cds Length = 583 Score = 396 bits (200), Expect = e-107 Identities = 293/324 (90%) Strand = Plus / Minus Query: 76 cccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaag 135 ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 324 cccttctttctgaccgaaacctgagcctggaacagtggatattccggtggcttccagaag 265 Query: 136 cttgaggcagtagtaaacatcgggctctttgccagcgctttttgctacatccatagctct 195 | ||||||||||| |||||||||| |||||||||||||||| ||| |||||||||||| Sbjct: 264 catgaggcagtagaaaacatcgggtgctttgccagcgcttttggctgtatccatagctct 205 Query: 196 ttgcggcaggcgtatttgcgggaaggaatacatagctccttctgtgaaattgcagacaac 255 |||||| | ||||| || || || || ||||||||||||||||| |||||||||||||| Sbjct: 204 ttgcggtaaacgtatctggggaaacgagtacatagctccttctgtaaaattgcagacaac 145 Query: 256 attgcggcaactattgaaaccgtctgtcattatttgtgccctcctcctcaaagattcaag 315 || ||||||||||||||||| || ||||||||||| ||||||||||||||||| || || Sbjct: 144 gtttcggcaactattgaaaccatcggtcattatttgcgccctcctcctcaaagactcgag 85 Query: 316 gatagacttactttcagcagaatacttcaggtacgagatgtctccaggtttaggagggtt 375 ||||||||| ||||||| || |||||||||||||||||| |||||||||||||||||||| Sbjct: 84 gatagacttgctttcagtagcatacttcaggtacgagatatctccaggtttaggagggtt 25 Query: 376 caccataagccccatgaagatctg 399 |||||| ||||||||||| ||||| Sbjct: 24 caccattagccccatgaatatctg 1
>gb|AY108756.1| Zea mays PCO087866 mRNA sequence Length = 1198 Score = 254 bits (128), Expect = 2e-64 Identities = 326/392 (83%) Strand = Plus / Minus Query: 76 cccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaag 135 |||||| || || |||||||| ||||| || |||||||| ||||| || || ||||| || Sbjct: 776 cccttccttttgcccaaaaccagagcccgggacagtggagattcctgtcgcctccaggag 717 Query: 136 cttgaggcagtagtaaacatcgggctctttgccagcgctttttgctacatccatagctct 195 ||||||||||||| | || || | |||||| || ||| |||| | || |||||||| Sbjct: 716 cttgaggcagtagaagacgtccgctgatttgccggctcttcttgccgcctcaatagctct 657 Query: 196 ttgcggcaggcgtatttgcgggaaggaatacatagctccttctgtgaaattgcagacaac 255 | ||||| |||||||| ||||| || |||||||||||||| ||||||||||| || || Sbjct: 656 cggtggcagacgtatttgggggaaagagtacatagctccttcagtgaaattgcacacgac 597 Query: 256 attgcggcaactattgaaaccgtctgtcattatttgtgccctcctcctcaaagattcaag 315 || |||||||| |||||||| |||||||| || |||| |||||||||||||||||| | Sbjct: 596 gtttcggcaactgttgaaaccatctgtcatcatgcgtgctctcctcctcaaagattcatg 537 Query: 316 gatagacttactttcagcagaatacttcaggtacgagatgtctccaggtttaggagggtt 375 ||| ||||| |||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 536 gatggacttgctttcagcagcgaacttcaggtacgagatatctccaggtttaggagggtt 477 Query: 376 caccataagccccatgaagatctgcccaggaacatttggactcagcgcgatcgatgcaac 435 ||||| | ||||| || || ||||||||||| ||||||||||| || || |||||||| Sbjct: 476 aaccattactcccataaaaatttgcccaggaacgtttggactcagtgctattgatgcaac 417 Query: 436 cttgtaaatctcgtcgacagtcttgggaggaa 467 |||||| ||||| || || ||||||||||||| Sbjct: 416 cttgtagatctcatctactgtcttgggaggaa 385
>gb|AY109741.1| Zea mays CL1839_2 mRNA sequence Length = 1303 Score = 216 bits (109), Expect = 5e-53 Identities = 321/392 (81%) Strand = Plus / Plus Query: 76 cccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaag 135 |||||| ||||| |||||||| || || ||||||||||| || || || || ||||| || Sbjct: 291 cccttccttctgcccaaaaccagatcccggaacagtggaaatccccgttgcctccaggag 350 Query: 136 cttgaggcagtagtaaacatcgggctctttgccagcgctttttgctacatccatagctct 195 ||||||||||||| |||| || | ||||||| || || ||||| | || || ||||| Sbjct: 351 cttgaggcagtagaaaacgtctgctgctttgccggctctctttgccgcctcgatggctct 410 Query: 196 ttgcggcaggcgtatttgcgggaaggaatacatagctccttctgtgaaattgcagacaac 255 | ||||| ||||||| |||| || |||||||||||||||||||||||||| || || Sbjct: 411 tgctggcagctgtatttggnggaaagagtacatagctccttctgtgaaattgcacaccac 470 Query: 256 attgcggcaactattgaaaccgtctgtcattatttgtgccctcctcctcaaagattcaag 315 ||| ||||| || ||||||||||||||||| || | || ||||||||||||||||| || Sbjct: 471 atttcggcagctgttgaaaccgtctgtcatcatgcgcgctctcctcctcaaagattcgag 530 Query: 316 gatagacttactttcagcagaatacttcaggtacgagatgtctccaggtttaggagggtt 375 ||| ||||| ||||| |||| ||||| |||| ||||| |||||||||||||||||||| Sbjct: 531 gatggacttgctttcggcagtgaacttcgggtatgagatatctccaggtttaggagggtt 590 Query: 376 caccataagccccatgaagatctgcccaggaacatttggactcagcgcgatcgatgcaac 435 ||||| | ||||| ||||| ||||| |||||||| |||||||| | || |||||||| Sbjct: 591 aaccatcactcccataaagatttgcccgggaacattcggactcagtactattgatgcaac 650 Query: 436 cttgtaaatctcgtcgacagtcttgggaggaa 467 |||||| ||||| || || ||||| ||||||| Sbjct: 651 cttgtatatctcatctactgtctttggaggaa 682
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 155 bits (78), Expect = 2e-34 Identities = 141/162 (87%) Strand = Plus / Plus Query: 74 tacccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccaga 133 ||||||||||| || || |||||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 446023 tacccttctttttgtccgaaacctgaccctggaacagtggatattccagttgcttcaaga 446082 Query: 134 agcttgaggcagtagtaaacatcgggctctttgccagcgctttttgctacatccatagct 193 ||||||||||||||| ||||||||| | |||||||||| ||||| ||| |||| |||||| Sbjct: 446083 agcttgaggcagtagaaaacatcggccgctttgccagcccttttggctgcatctatagct 446142 Query: 194 ctttgcggcaggcgtatttgcgggaaggaatacatagctcct 235 || | || | ||||||||| ||||| || |||||||||||| Sbjct: 446143 tttggtggtaagcgtatttgggggaaagagtacatagctcct 446184 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 233 ccttctgtgaaattgcagacaacattgcggcaactattgaaaccgtctgtcattatttgt 292 |||||||||||||||||||||||||| ||||||||||||||||| |||||||| | || Sbjct: 446273 ccttctgtgaaattgcagacaacatttcggcaactattgaaaccatctgtcatcaggcgt 446332 Query: 293 gccctcctcctcaaagattcaaggatagactt 324 || |||||||||||||| || ||||||||||| Sbjct: 446333 gctctcctcctcaaagactcgaggatagactt 446364 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 392 aagatctgcccaggaacatttggactcagcgcgatcgatgcaaccttgtaaatctcgtc 450 |||||||||||||||||||||||||| || ||||| |||||||||||||| |||||||| Sbjct: 447053 aagatctgcccaggaacatttggactgagtgcgattgatgcaaccttgtagatctcgtc 447111 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 326 ctttcagcagaatacttcaggtacgagatgtctccaggtttaggagggttcaccat 381 |||||||||||| ||||||| || ||||| |||||||| ||||||||||| ||||| Sbjct: 446516 ctttcagcagaaaacttcagataagagatatctccaggcttaggagggttaaccat 446571
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 155 bits (78), Expect = 2e-34 Identities = 141/162 (87%) Strand = Plus / Plus Query: 74 tacccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccaga 133 ||||||||||| || || |||||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 48187 tacccttctttttgtccgaaacctgaccctggaacagtggatattccagttgcttcaaga 48246 Query: 134 agcttgaggcagtagtaaacatcgggctctttgccagcgctttttgctacatccatagct 193 ||||||||||||||| ||||||||| | |||||||||| ||||| ||| |||| |||||| Sbjct: 48247 agcttgaggcagtagaaaacatcggccgctttgccagcccttttggctgcatctatagct 48306 Query: 194 ctttgcggcaggcgtatttgcgggaaggaatacatagctcct 235 || | || | ||||||||| ||||| || |||||||||||| Sbjct: 48307 tttggtggtaagcgtatttgggggaaagagtacatagctcct 48348 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 233 ccttctgtgaaattgcagacaacattgcggcaactattgaaaccgtctgtcattatttgt 292 |||||||||||||||||||||||||| ||||||||||||||||| |||||||| | || Sbjct: 48437 ccttctgtgaaattgcagacaacatttcggcaactattgaaaccatctgtcatcaggcgt 48496 Query: 293 gccctcctcctcaaagattcaaggatagactt 324 || |||||||||||||| || ||||||||||| Sbjct: 48497 gctctcctcctcaaagactcgaggatagactt 48528 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 392 aagatctgcccaggaacatttggactcagcgcgatcgatgcaaccttgtaaatctcgtc 450 |||||||||||||||||||||||||| || ||||| |||||||||||||| |||||||| Sbjct: 49217 aagatctgcccaggaacatttggactgagtgcgattgatgcaaccttgtagatctcgtc 49275 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 326 ctttcagcagaatacttcaggtacgagatgtctccaggtttaggagggttcaccat 381 |||||||||||| ||||||| || ||||| |||||||| ||||||||||| ||||| Sbjct: 48680 ctttcagcagaaaacttcagataagagatatctccaggcttaggagggttaaccat 48735
>gb|DQ118094.1| Vitis labrusca AlaT1 mRNA, complete cds Length = 1434 Score = 135 bits (68), Expect = 1e-28 Identities = 200/244 (81%) Strand = Plus / Minus Query: 76 cccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaag 135 |||||||||||| ||||| ||||| || || |||||||| |||||||||||||||| || Sbjct: 1317 cccttctttctgtccaaatcctgaaccagggacagtggaaattccagtggcttccaagag 1258 Query: 136 cttgaggcagtagtaaacatcgggctctttgccagcgctttttgctacatccatagctct 195 ||||||||||||| ||||||| | |||| ||||| |||| || | || |||||| | Sbjct: 1257 cttgaggcagtagaaaacatcagcgactttaccagcctttttggcagcctcaatagcttt 1198 Query: 196 ttgcggcaggcgtatttgcgggaaggaatacatagctccttctgtgaaattgcagacaac 255 | | |||| |||||||| ||||| || ||||| || |||||||||||||| || || || Sbjct: 1197 tggtggcaatcgtatttgagggaatgagtacatggccccttctgtgaaattacaaactac 1138 Query: 256 attgcggcaactattgaaaccgtctgtcattatttgtgccctcctcctcaaagattcaag 315 ||| | |||||||||||| || || |||||||| |||||||| ||||||| || ||||| Sbjct: 1137 atttctgcaactattgaatccatcagtcattatctgtgcccttctcctcagtgactcaag 1078 Query: 316 gata 319 |||| Sbjct: 1077 gata 1074 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 395 atctgcccaggaacatttggactcagcgcgatcgatgcaaccttgtaaatctcgtcgaca 454 ||||||||||| ||||||||||| || | || ||||||||||| |||||||| || ||| Sbjct: 998 atctgcccagggacatttggactgagtgatattgatgcaaccttataaatctcatcaaca 939 Query: 455 gtcttgggaggaat 468 |||| |||||||| Sbjct: 938 gtctgtggaggaat 925
>gb|DQ118095.1| Vitis vinifera AlaT1 mRNA, complete cds Length = 1455 Score = 127 bits (64), Expect = 3e-26 Identities = 199/244 (81%) Strand = Plus / Minus Query: 76 cccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaag 135 |||||||||||| ||||| ||||| || || |||||||| |||||||||||||||| || Sbjct: 1317 cccttctttctgtccaaatcctgaaccagggacagtggaaattccagtggcttccaagag 1258 Query: 136 cttgaggcagtagtaaacatcgggctctttgccagcgctttttgctacatccatagctct 195 ||||||||||||| ||||||| | |||| ||||| |||| || | || |||||| | Sbjct: 1257 cttgaggcagtagaaaacatcagcgactttaccagcctttttggcagcctcaatagcttt 1198 Query: 196 ttgcggcaggcgtatttgcgggaaggaatacatagctccttctgtgaaattgcagacaac 255 | | |||| |||||||| ||||| || ||||| || |||||||||||||| || || || Sbjct: 1197 tggtggcaatcgtatttgagggaatgagtacatggccccttctgtgaaattacaaactac 1138 Query: 256 attgcggcaactattgaaaccgtctgtcattatttgtgccctcctcctcaaagattcaag 315 ||| | |||||| ||||| || || |||||||| |||||||| ||||||| || ||||| Sbjct: 1137 atttctgcaactgttgaatccatcagtcattatctgtgcccttctcctcagtgactcaag 1078 Query: 316 gata 319 |||| Sbjct: 1077 gata 1074 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 395 atctgcccaggaacatttggactcagcgcgatcgatgcaaccttgtaaatctcgtcgaca 454 ||||||||||| ||||||||||| || | || ||||||||||| |||||||| || ||| Sbjct: 998 atctgcccagggacatttggactgagtgatattgatgcaaccttataaatctcatcaaca 939 Query: 455 gtcttgggaggaat 468 |||| |||||||| Sbjct: 938 gtctgtggaggaat 925
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 233 ccttctgtgaaattgcagacaacattgcggcaactattgaaaccgtctgtcattatttgt 292 |||||||||||||||||||||||||| ||||||||||||||||| |||||||| | || Sbjct: 185 ccttctgtgaaattgcagacaacatttcggcaactattgaaaccatctgtcatcaggcgt 244 Query: 293 gccctcctcctcaaagattcaaggatagactt 324 || |||||||||||||| || ||||||||||| Sbjct: 245 gctctcctcctcaaagactcgaggatagactt 276 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 392 aagatctgcccaggaacatttggactcagcgcgatcgatgcaaccttgtaaatctcgtc 450 |||||||||||||||||||||||||| || ||||| |||||||||||||| |||||||| Sbjct: 965 aagatctgcccaggaacatttggactgagtgcgattgatgcaaccttgtagatctcgtc 1023 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 140 aggcagtagtaaacatcgggctctttgccagcgctttttgctacatccatagctctttgc 199 ||||||||| ||||||||| | |||||||||| ||||| ||| |||| |||||| || | Sbjct: 1 aggcagtagaaaacatcggccgctttgccagcccttttggctgcatctatagcttttggt 60 Query: 200 ggcaggcgtatttgcgggaaggaatacatagctcct 235 || | ||||||||| ||||| || |||||||||||| Sbjct: 61 ggtaagcgtatttgggggaaagagtacatagctcct 96 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 326 ctttcagcagaatacttcaggtacgagatgtctccaggtttaggagggttcaccat 381 |||||||||||| ||||||| || ||||| |||||||| ||||||||||| ||||| Sbjct: 428 ctttcagcagaaaacttcagataagagatatctccaggcttaggagggttaaccat 483
>dbj|AP004918.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT13I21, TM0076a, complete sequence Length = 71794 Score = 109 bits (55), Expect = 8e-21 Identities = 76/83 (91%) Strand = Plus / Plus Query: 74 tacccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccaga 133 ||||| |||||||| ||||| |||||||| |||||||||||||| ||||||||||||| | Sbjct: 32346 tacccgtctttctgtccaaatcctgagccaggaacagtggatatgccagtggcttccaaa 32405 Query: 134 agcttgaggcagtagtaaacatc 156 |||||||| |||||||||||||| Sbjct: 32406 agcttgagacagtagtaaacatc 32428
>gb|AC126783.33| Medicago truncatula clone mth2-15k17, complete sequence Length = 117437 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Plus Query: 74 tacccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccaga 133 |||||||||||||| ||||| ||||| || || ||||||||||| ||||||||||||| | Sbjct: 77567 tacccttctttctgtccaaatcctgaaccagggacagtggatatgccagtggcttccaaa 77626 Query: 134 agcttgaggcagtagtaaacatc 156 |||||||| |||||||||||||| Sbjct: 77627 agcttgagacagtagtaaacatc 77649
>gb|AC010796.7|AC010796 Arabidopsis thaliana chromosome 1 BAC F24J13 genomic sequence, complete sequence Length = 87400 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 74 tacccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccaga 133 ||||||||||| || ||||| || ||||||||||| ||||| ||||| |||||||| | Sbjct: 65552 tacccttctttttgtccaaatccagagcctggaactgtggagattcctgtggcttctaag 65493 Query: 134 agcttgaggcagtagtaaac 153 ||||| ||||||||| |||| Sbjct: 65492 agcttaaggcagtagaaaac 65473 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 208 tatttgcgggaaggaatacatagctccttctgtgaaattgcagac 252 |||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 65418 tatttgagggaatgaatacatagcaccttctgtgaaattacagac 65374
>gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A18 genomic sequence, complete sequence Length = 108582 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 74 tacccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccaga 133 ||||||||||| || ||||| || ||||||||||| ||||| ||||| |||||||| | Sbjct: 88950 tacccttctttttgtccaaatccagagcctggaactgtggagattcctgtggcttctaag 89009 Query: 134 agcttgaggcagtagtaaac 153 ||||| ||||||||| |||| Sbjct: 89010 agcttaaggcagtagaaaac 89029 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 208 tatttgcgggaaggaatacatagctccttctgtgaaattgcagac 252 |||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 89084 tatttgagggaatgaatacatagcaccttctgtgaaattacagac 89128
>gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana BAC F26F24 from chromosome I, complete sequence Length = 99053 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 73 ttacccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccag 132 ||||||||||||||| ||||| || ||||| || || ||||| ||||| |||||||| | Sbjct: 45283 ttacccttctttctgtccaaatccagagccaggtactgtggagattcctgtggcttctaa 45342 Query: 133 aagcttgaggcagtagtaaacatcgggctctttgccagc 171 |||||||| |||||| |||| || ||| |||| ||||| Sbjct: 45343 gagcttgagacagtagaaaacgtctggcacttttccagc 45381
>ref|NM_001036185.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.3 mRNA, complete cds Length = 1817 Score = 60.0 bits (30), Expect = 7e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 76 cccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaag 135 ||||||||| || ||||| || ||||||||||| ||||| ||||| |||||||| | || Sbjct: 1464 cccttctttttgtccaaatccagagcctggaactgtggagattcctgtggcttctaagag 1405 Query: 136 cttgaggcagtagtaaac 153 ||| ||||||||| |||| Sbjct: 1404 cttaaggcagtagaaaac 1387 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 208 tatttgcgggaaggaatacatagctccttctgtgaaattgcagac 252 |||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 1332 tatttgagggaatgaatacatagcaccttctgtgaaattacagac 1288
>ref|NM_001036186.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.4 mRNA, complete cds Length = 1835 Score = 60.0 bits (30), Expect = 7e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 76 cccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaag 135 ||||||||| || ||||| || ||||||||||| ||||| ||||| |||||||| | || Sbjct: 1482 cccttctttttgtccaaatccagagcctggaactgtggagattcctgtggcttctaagag 1423 Query: 136 cttgaggcagtagtaaac 153 ||| ||||||||| |||| Sbjct: 1422 cttaaggcagtagaaaac 1405 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 208 tatttgcgggaaggaatacatagctccttctgtgaaattgcagac 252 |||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 1350 tatttgagggaatgaatacatagcaccttctgtgaaattacagac 1306
>ref|NM_105726.2| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.1 mRNA, complete cds Length = 1795 Score = 60.0 bits (30), Expect = 7e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 76 cccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaag 135 ||||||||| || ||||| || ||||||||||| ||||| ||||| |||||||| | || Sbjct: 1442 cccttctttttgtccaaatccagagcctggaactgtggagattcctgtggcttctaagag 1383 Query: 136 cttgaggcagtagtaaac 153 ||| ||||||||| |||| Sbjct: 1382 cttaaggcagtagaaaac 1365 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 208 tatttgcgggaaggaatacatagctccttctgtgaaattgcagac 252 |||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 1310 tatttgagggaatgaatacatagcaccttctgtgaaattacagac 1266
>ref|NM_202393.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.2 mRNA, complete cds Length = 1851 Score = 60.0 bits (30), Expect = 7e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 76 cccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaag 135 ||||||||| || ||||| || ||||||||||| ||||| ||||| |||||||| | || Sbjct: 1498 cccttctttttgtccaaatccagagcctggaactgtggagattcctgtggcttctaagag 1439 Query: 136 cttgaggcagtagtaaac 153 ||| ||||||||| |||| Sbjct: 1438 cttaaggcagtagaaaac 1421 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 208 tatttgcgggaaggaatacatagctccttctgtgaaattgcagac 252 |||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 1366 tatttgagggaatgaatacatagcaccttctgtgaaattacagac 1322
>gb|AY062982.1| Arabidopsis thaliana putative alanine aminotransferase (At1g70580) mRNA, complete cds Length = 1477 Score = 60.0 bits (30), Expect = 7e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 76 cccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaag 135 ||||||||| || ||||| || ||||||||||| ||||| ||||| |||||||| | || Sbjct: 1317 cccttctttttgtccaaatccagagcctggaactgtggagattcctgtggcttctaagag 1258 Query: 136 cttgaggcagtagtaaac 153 ||| ||||||||| |||| Sbjct: 1257 cttaaggcagtagaaaac 1240 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 208 tatttgcgggaaggaatacatagctccttctgtgaaattgcagac 252 |||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 1185 tatttgagggaatgaatacatagcaccttctgtgaaattacagac 1141
>gb|AY035130.1| Arabidopsis thaliana putative alanine aminotransferase (At1g70580) mRNA, complete cds Length = 1773 Score = 60.0 bits (30), Expect = 7e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 76 cccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaag 135 ||||||||| || ||||| || ||||||||||| ||||| ||||| |||||||| | || Sbjct: 1442 cccttctttttgtccaaatccagagcctggaactgtggagattcctgtggcttctaagag 1383 Query: 136 cttgaggcagtagtaaac 153 ||| ||||||||| |||| Sbjct: 1382 cttaaggcagtagaaaac 1365 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 208 tatttgcgggaaggaatacatagctccttctgtgaaattgcagac 252 |||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 1310 tatttgagggaatgaatacatagcaccttctgtgaaattacagac 1266
>gb|AF479640.1| Arabidopsis thaliana glutamate:glyoxylate aminotransferase 2 (GGT2) mRNA, complete cds Length = 1582 Score = 60.0 bits (30), Expect = 7e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 76 cccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaag 135 ||||||||| || ||||| || ||||||||||| ||||| ||||| |||||||| | || Sbjct: 1336 cccttctttttgtccaaatccagagcctggaactgtggagattcctgtggcttctaagag 1277 Query: 136 cttgaggcagtagtaaac 153 ||| ||||||||| |||| Sbjct: 1276 cttaaggcagtagaaaac 1259 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 208 tatttgcgggaaggaatacatagctccttctgtgaaattgcagac 252 |||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 1204 tatttgagggaatgaatacatagcaccttctgtgaaattacagac 1160
>gb|AY084890.1| Arabidopsis thaliana clone 120310 mRNA, complete sequence Length = 1782 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 208 tatttgcgggaaggaatacatagctccttctgtgaaattgcagac 252 |||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 1310 tatttgagggaatgaatacatagcaccttctgtgaaattacagac 1266 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 76 cccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttc 129 ||||||||| || ||||| || ||||||||||| ||||| ||||| |||||||| Sbjct: 1442 cccttctttttgtccaaatccagagcctggaactgtggagattcctgtggcttc 1389
>ref|NM_102180.2| Arabidopsis thaliana GGT1 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1) AT1G23310 (GGT1) transcript variant AT1G23310.1 mRNA, complete cds Length = 2052 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 77 ccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaagc 136 ||||||||||| ||||| || ||||| || || ||||| ||||| |||||||| | ||| Sbjct: 1618 ccttctttctgtccaaatccagagccaggtactgtggagattcctgtggcttctaagagc 1559 Query: 137 ttgaggcagtagtaaacatcgggctctttgccagc 171 ||||| |||||| |||| || ||| |||| ||||| Sbjct: 1558 ttgagacagtagaaaacgtctggcacttttccagc 1524 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Minus Query: 206 cgtatttgcgggaaggaatacatagctccttctgtgaaattgca 249 |||||||| || || |||||||| || ||||||||||||||||| Sbjct: 1489 cgtatttgaggaaacgaatacattgcaccttctgtgaaattgca 1446
>ref|NM_001036006.1| Arabidopsis thaliana GGT1 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1) AT1G23310 (GGT1) transcript variant AT1G23310.2 mRNA, complete cds Length = 2066 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 77 ccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaagc 136 ||||||||||| ||||| || ||||| || || ||||| ||||| |||||||| | ||| Sbjct: 1652 ccttctttctgtccaaatccagagccaggtactgtggagattcctgtggcttctaagagc 1593 Query: 137 ttgaggcagtagtaaacatcgggctctttgccagc 171 ||||| |||||| |||| || ||| |||| ||||| Sbjct: 1592 ttgagacagtagaaaacgtctggcacttttccagc 1558 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Minus Query: 206 cgtatttgcgggaaggaatacatagctccttctgtgaaattgca 249 |||||||| || || |||||||| || ||||||||||||||||| Sbjct: 1523 cgtatttgaggaaacgaatacattgcaccttctgtgaaattgca 1480
>gb|AY150373.1| Arabidopsis thaliana putative alanine aminotransferase (At1g23310) mRNA, complete cds Length = 1477 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 77 ccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaagc 136 ||||||||||| ||||| || ||||| || || ||||| ||||| |||||||| | ||| Sbjct: 1316 ccttctttctgtccaaatccagagccaggtactgtggagattcctgtggcttctaagagc 1257 Query: 137 ttgaggcagtagtaaacatcgggctctttgccagc 171 ||||| |||||| |||| || ||| |||| ||||| Sbjct: 1256 ttgagacagtagaaaacgtctggcacttttccagc 1222 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Minus Query: 206 cgtatttgcgggaaggaatacatagctccttctgtgaaattgca 249 |||||||| || || |||||||| || ||||||||||||||||| Sbjct: 1187 cgtatttgaggaaacgaatacattgcaccttctgtgaaattgca 1144
>gb|AF360195.1| Arabidopsis thaliana putative alanine aminotransferase (At1g23310) mRNA, complete cds Length = 1768 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 77 ccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaagc 136 ||||||||||| ||||| || ||||| || || ||||| ||||| |||||||| | ||| Sbjct: 1440 ccttctttctgtccaaatccagagccaggtactgtggagattcctgtggcttctaagagc 1381 Query: 137 ttgaggcagtagtaaacatcgggctctttgccagc 171 ||||| |||||| |||| || ||| |||| ||||| Sbjct: 1380 ttgagacagtagaaaacgtctggcacttttccagc 1346 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Minus Query: 206 cgtatttgcgggaaggaatacatagctccttctgtgaaattgc 248 |||||||| || || |||||||| || |||||||||||||||| Sbjct: 1311 cgtatttgaggaaacgaatacattgcaccttctgtgaaattgc 1269
>gb|AY058868.1| Arabidopsis thaliana At1g23310/F26F24_4 mRNA, complete cds Length = 1762 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 77 ccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaagc 136 ||||||||||| ||||| || ||||| || || ||||| ||||| |||||||| | ||| Sbjct: 1422 ccttctttctgtccaaatccagagccaggtactgtggagattcctgtggcttctaagagc 1363 Query: 137 ttgaggcagtagtaaacatcgggctctttgccagc 171 ||||| |||||| |||| || ||| |||| ||||| Sbjct: 1362 ttgagacagtagaaaacgtctggcacttttccagc 1328 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Minus Query: 206 cgtatttgcgggaaggaatacatagctccttctgtgaaattgca 249 |||||||| || || |||||||| || ||||||||||||||||| Sbjct: 1293 cgtatttgaggaaacgaatacattgcaccttctgtgaaattgca 1250
>gb|AY056379.1| Arabidopsis thaliana At1g23310/F26F24_4 mRNA, complete cds Length = 1647 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 77 ccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaagc 136 ||||||||||| ||||| || ||||| || || ||||| ||||| |||||||| | ||| Sbjct: 1422 ccttctttctgtccaaatccagagccaggtactgtggagattcctgtggcttctaagagc 1363 Query: 137 ttgaggcagtagtaaacatcgggctctttgccagc 171 ||||| |||||| |||| || ||| |||| ||||| Sbjct: 1362 ttgagacagtagaaaacgtctggcacttttccagc 1328 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Minus Query: 206 cgtatttgcgggaaggaatacatagctccttctgtgaaattgca 249 |||||||| || || |||||||| || ||||||||||||||||| Sbjct: 1293 cgtatttgaggaaacgaatacattgcaccttctgtgaaattgca 1250
>gb|AY042902.1| Arabidopsis thaliana alanine aminotransferase-like protein (F26F24.16) mRNA, partial cds Length = 1328 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 77 ccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaagc 136 ||||||||||| ||||| || ||||| || || ||||| ||||| |||||||| | ||| Sbjct: 1011 ccttctttctgtccaaatccagagccaggtactgtggagattcctgtggcttctaagagc 952 Query: 137 ttgaggcagtagtaaacatcgggctctttgccagc 171 ||||| |||||| |||| || ||| |||| ||||| Sbjct: 951 ttgagacagtagaaaacgtctggcacttttccagc 917 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Minus Query: 206 cgtatttgcgggaaggaatacatagctccttctgtgaaattgca 249 |||||||| || || |||||||| || ||||||||||||||||| Sbjct: 882 cgtatttgaggaaacgaatacattgcaccttctgtgaaattgca 839
>emb|BX816016.1|CNS0AD1E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH23ZA06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 617 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 77 ccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaagc 136 ||||||||||| ||||| || ||||| || || ||||| ||||| |||||||| | ||| Sbjct: 381 ccttctttctgtccaaatccagagccaggtactgtggagattcctgtggcttctaagagc 322 Query: 137 ttgaggcagtagtaaacatcgggctctttgccagc 171 ||||| |||||| |||| || ||| |||| ||||| Sbjct: 321 ttgagacagtagaaaacgtctggcacttttccagc 287 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Minus Query: 206 cgtatttgcgggaaggaatacatagctccttctgtgaaattgca 249 |||||||| || || |||||||| || ||||||||||||||||| Sbjct: 252 cgtatttgaggaaacgaatacattgcaccttctgtgaaattgca 209
>gb|AF479639.1| Arabidopsis thaliana glutamate:glyoxylate aminotransferase 1 (GGT1) mRNA, complete cds Length = 1714 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 77 ccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaagc 136 ||||||||||| ||||| || ||||| || || ||||| ||||| |||||||| | ||| Sbjct: 1463 ccttctttctgtccaaatccagagccaggtactgtggagattcctgtggcttctaagagc 1404 Query: 137 ttgaggcagtagtaaacatcgggctctttgccagc 171 ||||| |||||| |||| || ||| |||| ||||| Sbjct: 1403 ttgagacagtagaaaacgtctggcacttttccagc 1369 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Minus Query: 206 cgtatttgcgggaaggaatacatagctccttctgtgaaattgca 249 |||||||| || || |||||||| || ||||||||||||||||| Sbjct: 1334 cgtatttgaggaaacgaatacattgcaccttctgtgaaattgca 1291
>gb|BT002643.1| Arabidopsis thaliana At1g23310/F26F24_4 gene, complete cds Length = 1446 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 77 ccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaagc 136 ||||||||||| ||||| || ||||| || || ||||| ||||| |||||||| | ||| Sbjct: 1316 ccttctttctgtccaaatccagagccaggtactgtggagattcctgtggcttctaagagc 1257 Query: 137 ttgaggcagtagtaaacatcgggctctttgccagc 171 ||||| |||||| |||| || ||| |||| ||||| Sbjct: 1256 ttgagacagtagaaaacgtctggcacttttccagc 1222 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Minus Query: 206 cgtatttgcgggaaggaatacatagctccttctgtgaaattgca 249 |||||||| || || |||||||| || ||||||||||||||||| Sbjct: 1187 cgtatttgaggaaacgaatacattgcaccttctgtgaaattgca 1144
>emb|BX814587.1|CNS0AAUD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB82ZG03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1707 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Minus Query: 206 cgtatttgcgggaaggaatacatagctccttctgtgaaattgca 249 |||||||| || || |||||||| || ||||||||||||||||| Sbjct: 1276 cgtatttgaggaaacgaatacattgcaccttctgtgaaattgca 1233 Score = 46.1 bits (23), Expect = 0.10 Identities = 59/71 (83%) Strand = Plus / Minus Query: 77 ccttctttctgaccaaaacctgagcctggaacagtggatattccagtggcttccagaagc 136 ||||||||||| ||||| || ||||| || || ||||| ||||| |||||||| | ||| Sbjct: 1405 ccttctttctgtccaaatccagagccaggtactgtggagattcctgtggcttctaagagc 1346 Query: 137 ttgaggcagta 147 ||||| ||||| Sbjct: 1345 ttgagacagta 1335
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 aaaaaatcataaaaatagtaa 51 ||||||||||||||||||||| Sbjct: 1335525 aaaaaatcataaaaatagtaa 1335505
>gb|AC138452.10| Medicago truncatula clone mth2-17p11, complete sequence Length = 127710 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 agtggatattccagtggcttc 129 ||||||||||||||||||||| Sbjct: 34180 agtggatattccagtggcttc 34200
>gb|AC147430.9| Medicago truncatula clone mth2-71e6, complete sequence Length = 125478 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 agtggatattccagtggcttc 129 ||||||||||||||||||||| Sbjct: 115795 agtggatattccagtggcttc 115815
>emb|AL139077.2|CJ11168X4 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment 4/6 Length = 282183 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 aaaaaatcataaaaatagtaa 51 ||||||||||||||||||||| Sbjct: 274822 aaaaaatcataaaaatagtaa 274802
>emb|AL929014.28| Zebrafish DNA sequence from clone CH211-198B3 in linkage group 20 Contains the gene for a novel protein similar to vertebrate fibronectin type III domain containing 1 (FNDC1), the 5' end of the gene for a novel protein similar to vertebrate otoferlin (OTOF), a novel gene and two CpG islands, complete sequence Length = 163523 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 aaaaaatcataaaaatagtaa 51 ||||||||||||||||||||| Sbjct: 161187 aaaaaatcataaaaatagtaa 161167
>gb|AC161245.2| Mus musculus BAC clone RP24-394N21 from chromosome 9, complete sequence Length = 177389 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ccagtggcttccagaagctt 138 |||||||||||||||||||| Sbjct: 28841 ccagtggcttccagaagctt 28860
>gb|AC026813.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-119M19, complete sequence Length = 113770 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 tggcttccagaagcttgagg 142 |||||||||||||||||||| Sbjct: 55050 tggcttccagaagcttgagg 55031
>ref|XM_391482.1| Gibberella zeae PH-1 chromosome linkage group 14 hypothetical protein (FG11306.1) partial mRNA Length = 4050 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 aatctcgtcgacagtcttgg 461 |||||||||||||||||||| Sbjct: 918 aatctcgtcgacagtcttgg 899
>gb|AC146141.2| Pan troglodytes BAC clone RP43-3A23 from 7, complete sequence Length = 182547 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 actgaaaaaatcataaaaatagta 50 ||||||||||| |||||||||||| Sbjct: 148844 actgaaaaaatgataaaaatagta 148867
>emb|AL161443.13| Human DNA sequence from clone RP11-169L18 on chromosome 9 Contains the 3' end of the JMJD2C gene for jumonji domain containing 2C, complete sequence Length = 140439 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 caaggatagacttactttca 331 |||||||||||||||||||| Sbjct: 12716 caaggatagacttactttca 12735
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 tcagcagaatacttcaggta 348 |||||||||||||||||||| Sbjct: 174034 tcagcagaatacttcaggta 174053
>emb|AL603907.12| Mouse DNA sequence from clone RP23-139D10 on chromosome 11 Contains a novel gene, complete sequence Length = 226006 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 acctgagcctggaacagtgg 113 |||||||||||||||||||| Sbjct: 90286 acctgagcctggaacagtgg 90305
>emb|AL732631.4| Mouse DNA sequence from clone RP23-345P19 on chromosome 11 no genes, complete sequence Length = 191363 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 agatctgcccaggaacattt 412 |||||||||||||||||||| Sbjct: 168572 agatctgcccaggaacattt 168553
>gb|AC079177.21| Homo sapiens Xp BAC RP11-147B14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 155533 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 ttgtaactgaaaaaatcataaaaa 45 |||||||||||||||| ||||||| Sbjct: 10354 ttgtaactgaaaaaataataaaaa 10377
>gb|DQ026694.1| Sciurothamnion sp. strain Hungtou 16S ribosomal RNA gene, partial sequence; plastid Length = 1407 Score = 40.1 bits (20), Expect = 6.3 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 291 gtgccctcctcctcaaagattc-aaggataga 321 |||||||| ||||||||||||| ||||||||| Sbjct: 1375 gtgccctcttcctcaaagattctaaggataga 1344
>gb|AC009084.9| Homo sapiens chromosome 16 clone RP11-361L15, complete sequence Length = 183864 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 tgctacatccatagctcttt 197 |||||||||||||||||||| Sbjct: 133185 tgctacatccatagctcttt 133166
>gb|AC023108.4| Homo sapiens BAC clone RP11-121I13 from 2, complete sequence Length = 173794 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 actgaaaaaatcataaaaatagta 50 ||||||||||| |||||||||||| Sbjct: 62173 actgaaaaaatgataaaaatagta 62196
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 caaaacctgagcctggaacagtgg 113 |||| ||||||||||||||||||| Sbjct: 2118155 caaagcctgagcctggaacagtgg 2118132
>gb|AC138456.5| Mus musculus BAC clone RP24-262P4 from 3, complete sequence Length = 166191 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cagaagcttgaggcagtagt 149 |||||||||||||||||||| Sbjct: 87942 cagaagcttgaggcagtagt 87961
>emb|BX000480.6| Zebrafish DNA sequence from clone DKEY-14C5 in linkage group 17, complete sequence Length = 191781 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 aaaaatcataaaaatagtaa 51 |||||||||||||||||||| Sbjct: 175558 aaaaatcataaaaatagtaa 175577
>gb|AC161596.2| Mus musculus BAC clone RP23-477K6 from chromosome 9, complete sequence Length = 187832 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ccagtggcttccagaagctt 138 |||||||||||||||||||| Sbjct: 186995 ccagtggcttccagaagctt 187014 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,109,443 Number of Sequences: 3902068 Number of extensions: 4109443 Number of successful extensions: 81813 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 81589 Number of HSP's gapped (non-prelim): 225 length of query: 468 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 446 effective length of database: 17,147,199,772 effective search space: 7647651098312 effective search space used: 7647651098312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)