ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63k15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC116367.10| Oryza sativa (japonica cultivar-group) chromosom... 60 8e-06
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 60 8e-06
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 60 8e-06
4gb|DQ355953.1| Oryza sativa (indica cultivar-group) cultivar Teq... 54 5e-04
5gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
6gb|DQ355952.1| Oryza sativa (indica cultivar-group) cultivar Min... 52 0.002
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
8dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
9gb|AC168120.3| Mus musculus BAC clone RP23-49A14 from chromosome... 44 0.48
10gb|AC163624.4| Mus musculus BAC clone RP24-558P12 from chromosom... 44 0.48
11dbj|AK138166.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 44 0.48
12dbj|AK068182.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.48
13gb|AC140430.3| Mus musculus BAC clone RP24-105B23 from 3, comple... 44 0.48
14ref|NM_195473.1| Oryza sativa (japonica cultivar-group) putative... 42 1.9
15gb|AC092387.6| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
16emb|BX537348.8| Zebrafish DNA sequence from clone CH211-218O21 i... 42 1.9
17emb|BX324131.6| Zebrafish DNA sequence from clone CH211-119E14 i... 42 1.9
18gb|AC092172.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
19dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
20gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
21gb|AC025501.19| Mus musculus chromosome 10, clone RP23-129O23, c... 40 7.6
22ref|NM_188585.1| Oryza sativa (japonica cultivar-group), predic... 40 7.6
23gb|AC158514.2| Mus musculus BAC clone RP24-480D16 from chromosom... 40 7.6
24gb|AC090437.62| Mus musculus strain C57BL/6J clone rp23-11f20 ma... 40 7.6
25gb|AC154903.4| Mus musculus BAC clone RP23-414E24 from chromosom... 40 7.6
26gb|AC161603.4| Mus musculus BAC clone RP23-304M9 from chromosome... 40 7.6
27gb|AY050668.1| Homo sapiens PKC-potentiated PP1 inhibitory prote... 40 7.6
28gb|AC123074.2| Mus musculus BAC clone RP23-168H19 from 10, compl... 40 7.6
29emb|CR385085.9| Zebrafish DNA sequence from clone CH211-195A16, ... 40 7.6
30dbj|AB232921.1| Oryzias latipes hox gene cluster, complete cds, ... 40 7.6
31emb|BX321879.14| Zebrafish DNA sequence from clone CH211-147M4 i... 40 7.6
32gb|AC011479.7| Homo sapiens chromosome 19 clone CTB-102L5, compl... 40 7.6
33dbj|AB126461.1| Bacillus halodurans gene for transposase A of IS... 40 7.6
34gb|AC011465.4|AC011465 Homo sapiens chromosome 19 clone CTC-450M... 40 7.6
35emb|BX004768.5| Zebrafish DNA sequence from clone CH211-15L16, c... 40 7.6
36emb|BX294124.8| Mouse DNA sequence from clone RP23-80H12 on chro... 40 7.6
37gb|AC142415.4| Mus musculus BAC clone RP23-155F24 from 10, compl... 40 7.6
38emb|AL589876.11| Mouse DNA sequence from clone RP23-117O11 on ch... 40 7.6
39gb|L09718.1|FCLCAPSIDA Feline calicivirus capsid protein gene, c... 40 7.6 
>gb|AC116367.10| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0059H21 map R3342S, complete sequence
          Length = 133790

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                         
Query: 451   aagctccgcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacat 510
             |||||| |||||||| || || |||||||||||||| | | | | ||| ||| |||||||
Sbjct: 66926 aagctctgcaggaaacgcctgttgaacccactgcctgatgttcagttctcccacaaacat 66985

                                                          
Query: 511   tgcatcagtgggtcttcttncggtgaagacttcaaggagcatgat 555
              ||||| ||||||||| |  | ||||| |||||||| ||||||||
Sbjct: 66986 agcatctgtgggtcttttcgcagtgaacacttcaagcagcatgat 67030



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 81/101 (80%)
 Strand = Plus / Plus

                                                                         
Query: 458   gcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacattgcatca 517
             ||||||||||| ||  ||||||||||||| | | ||| ||| ||| ||||||| ||||| 
Sbjct: 94827 gcaggaaatgcctgaagaacccactgcctgatgtttagttctcccacaaacatagcatct 94886

                                                      
Query: 518   gtgggtcttcttncggtgaagacttcaaggagcatgatccc 558
             || |||||  |  | ||||| |||||||| | |||||||||
Sbjct: 94887 gttggtctcttcgcagtgaacacttcaagcaacatgatccc 94927
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 86/105 (81%)
 Strand = Plus / Minus

                                                                            
Query: 451      aagctccgcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacat 510
                |||||| |||||||| || || |||||||||||||| | | | | ||| ||| |||||||
Sbjct: 27778746 aagctctgcaggaaacgcctgttgaacccactgcctgatgttcagttctcccacaaacat 27778687

                                                             
Query: 511      tgcatcagtgggtcttcttncggtgaagacttcaaggagcatgat 555
                 ||||| ||||||||| |  | ||||| |||||||| ||||||||
Sbjct: 27778686 agcatctgtgggtcttttcgcagtgaacacttcaagcagcatgat 27778642



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 85/105 (80%)
 Strand = Plus / Minus

                                                                            
Query: 451      aagctccgcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacat 510
                |||||| |||||||| || || |||||||||||||| | | | | ||| ||| |||||||
Sbjct: 27626393 aagctctgcaggaaacgcctgttgaacccactgcctgatgttcagttctcccacaaacat 27626334

                                                             
Query: 511      tgcatcagtgggtcttcttncggtgaagacttcaaggagcatgat 555
                 ||||| ||||||||  |  | ||||| |||||||| ||||||||
Sbjct: 27626333 agcatctgtgggtctcttcgcagtgaacacttcaagcagcatgat 27626289



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 81/101 (80%)
 Strand = Plus / Minus

                                                                            
Query: 458      gcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacattgcatca 517
                ||||||||||| ||  ||||||||||||| | | ||| ||| ||| ||||||| ||||| 
Sbjct: 27750845 gcaggaaatgcctgaagaacccactgcctgatgtttagttctcccacaaacatagcatct 27750786

                                                         
Query: 518      gtgggtcttcttncggtgaagacttcaaggagcatgatccc 558
                || |||||  |  | ||||| |||||||| | |||||||||
Sbjct: 27750785 gttggtctcttcgcagtgaacacttcaagcaacatgatccc 27750745



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 81/101 (80%)
 Strand = Plus / Minus

                                                                            
Query: 458      gcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacattgcatca 517
                ||||||||||| ||  ||||||||||||| | | ||| ||| ||| ||||||| ||||| 
Sbjct: 27615361 gcaggaaatgcctgaagaacccactgcctgatgtttagttctcccacaaacatagcatct 27615302

                                                         
Query: 518      gtgggtcttcttncggtgaagacttcaaggagcatgatccc 558
                || |||||  |  | ||||| |||||||| | |||||||||
Sbjct: 27615301 gttggtctcttcgcagtgaacacttcaagcaacatgatccc 27615261



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                            
Query: 470      tggtgaacccactgcctaagggttaattcacccccaaacattgcatcagtgggtcttctt 529
                |||| |||||||||||| | | | | ||| ||| ||||||| ||||| ||||||||| | 
Sbjct: 27608248 tggtaaacccactgccttatgttcagttcccccacaaacatagcatctgtgggtcttttc 27608189

                                             
Query: 530      ncggtgaagacttcaaggagcatgatccc 558
                 | ||||| ||||| || |||||||||||
Sbjct: 27608188 ccagtgaacacttcgagtagcatgatccc 27608160



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 81/101 (80%)
 Strand = Plus / Minus

                                                                            
Query: 458      gcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacattgcatca 517
                ||||||||||| ||  ||||||||||||| | | ||| ||| ||| ||||||| ||||| 
Sbjct: 27604058 gcaggaaatgcctgaagaacccactgcctgatgtttagttctcccacaaacatagcatct 27603999

                                                         
Query: 518      gtgggtcttcttncggtgaagacttcaaggagcatgatccc 558
                || |||||  |  | ||||| |||||||| | |||||||||
Sbjct: 27603998 gttggtctcttcgcagtgaacacttcaagcaacatgatccc 27603958
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 86/105 (81%)
 Strand = Plus / Minus

                                                                            
Query: 451      aagctccgcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacat 510
                |||||| |||||||| || || |||||||||||||| | | | | ||| ||| |||||||
Sbjct: 27802734 aagctctgcaggaaacgcctgttgaacccactgcctgatgttcagttctcccacaaacat 27802675

                                                             
Query: 511      tgcatcagtgggtcttcttncggtgaagacttcaaggagcatgat 555
                 ||||| ||||||||| |  | ||||| |||||||| ||||||||
Sbjct: 27802674 agcatctgtgggtcttttcgcagtgaacacttcaagcagcatgat 27802630



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 85/105 (80%)
 Strand = Plus / Minus

                                                                            
Query: 451      aagctccgcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacat 510
                |||||| |||||||| || || |||||||||||||| | | | | ||| ||| |||||||
Sbjct: 27650381 aagctctgcaggaaacgcctgttgaacccactgcctgatgttcagttctcccacaaacat 27650322

                                                             
Query: 511      tgcatcagtgggtcttcttncggtgaagacttcaaggagcatgat 555
                 ||||| ||||||||  |  | ||||| |||||||| ||||||||
Sbjct: 27650321 agcatctgtgggtctcttcgcagtgaacacttcaagcagcatgat 27650277



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 81/101 (80%)
 Strand = Plus / Minus

                                                                            
Query: 458      gcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacattgcatca 517
                ||||||||||| ||  ||||||||||||| | | ||| ||| ||| ||||||| ||||| 
Sbjct: 27774833 gcaggaaatgcctgaagaacccactgcctgatgtttagttctcccacaaacatagcatct 27774774

                                                         
Query: 518      gtgggtcttcttncggtgaagacttcaaggagcatgatccc 558
                || |||||  |  | ||||| |||||||| | |||||||||
Sbjct: 27774773 gttggtctcttcgcagtgaacacttcaagcaacatgatccc 27774733



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 81/101 (80%)
 Strand = Plus / Minus

                                                                            
Query: 458      gcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacattgcatca 517
                ||||||||||| ||  ||||||||||||| | | ||| ||| ||| ||||||| ||||| 
Sbjct: 27639349 gcaggaaatgcctgaagaacccactgcctgatgtttagttctcccacaaacatagcatct 27639290

                                                         
Query: 518      gtgggtcttcttncggtgaagacttcaaggagcatgatccc 558
                || |||||  |  | ||||| |||||||| | |||||||||
Sbjct: 27639289 gttggtctcttcgcagtgaacacttcaagcaacatgatccc 27639249



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                            
Query: 470      tggtgaacccactgcctaagggttaattcacccccaaacattgcatcagtgggtcttctt 529
                |||| |||||||||||| | | | | ||| ||| ||||||| ||||| ||||||||| | 
Sbjct: 27632236 tggtaaacccactgccttatgttcagttcccccacaaacatagcatctgtgggtcttttc 27632177

                                             
Query: 530      ncggtgaagacttcaaggagcatgatccc 558
                 | ||||| ||||| || |||||||||||
Sbjct: 27632176 ccagtgaacacttcgagtagcatgatccc 27632148



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 81/101 (80%)
 Strand = Plus / Minus

                                                                            
Query: 458      gcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacattgcatca 517
                ||||||||||| ||  ||||||||||||| | | ||| ||| ||| ||||||| ||||| 
Sbjct: 27628046 gcaggaaatgcctgaagaacccactgcctgatgtttagttctcccacaaacatagcatct 27627987

                                                         
Query: 518      gtgggtcttcttncggtgaagacttcaaggagcatgatccc 558
                || |||||  |  | ||||| |||||||| | |||||||||
Sbjct: 27627986 gttggtctcttcgcagtgaacacttcaagcaacatgatccc 27627946
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>gb|DQ355953.1| Oryza sativa (indica cultivar-group) cultivar Teqing receptor kinase
             (TRKd) pseudogene, complete sequence; and receptor kinase
             TRKa (TRKa), receptor kinase TRKe (TRKe), and receptor
             kinase TRKb (TRKb) genes, complete cds
          Length = 33301

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 63/75 (84%)
 Strand = Plus / Minus

                                                                         
Query: 451   aagctccgcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacat 510
             |||||| |||||||| || ||||||||||||||||| | | | | ||| ||| |||||||
Sbjct: 30090 aagctctgcaggaaacgcctggtgaacccactgcctgatgttcagttctcccacaaacat 30031

                            
Query: 511   tgcatcagtgggtct 525
              ||||| ||||||||
Sbjct: 30030 agcatctgtgggtct 30016



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 79/98 (80%)
 Strand = Plus / Minus

                                                                         
Query: 461   ggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacattgcatcagtg 520
             ||||| || |||| |||||||||||| | | | | ||| ||| ||||||| ||||| |||
Sbjct: 16437 ggaaacgcctggtaaacccactgccttatgttcagttcccccacaaacatagcatctgtg 16378

                                                   
Query: 521   ggtcttcttncggtgaagacttcaaggagcatgatccc 558
             |||||| |  | ||||| ||||| || |||||||||||
Sbjct: 16377 ggtcttttcccagtgaacacttcgagtagcatgatccc 16340



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 81/101 (80%)
 Strand = Plus / Minus

                                                                         
Query: 458   gcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacattgcatca 517
             ||||||||||| ||  ||||||||||||| | | ||| ||| ||| ||||||| ||||| 
Sbjct: 12234 gcaggaaatgcctgaagaacccactgcctgatgtttagttctcccacaaacatagcatct 12175

                                                      
Query: 518   gtgggtcttcttncggtgaagacttcaaggagcatgatccc 558
             || |||||  |  | ||||| |||||||| | |||||||||
Sbjct: 12174 gttggtctcttcgcagtgaacacttcaagcaacatgatccc 12134
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>gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0004O15 map near R3342S, complete sequence
          Length = 140142

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 85/105 (80%)
 Strand = Plus / Plus

                                                                         
Query: 451   aagctccgcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacat 510
             |||||| |||||||| || || |||||||||||||| | | | | ||| ||| |||||||
Sbjct: 95580 aagctctgcaggaaacgcctgttgaacccactgcctgatgttcagttctcccacaaacat 95639

                                                          
Query: 511   tgcatcagtgggtcttcttncggtgaagacttcaaggagcatgat 555
              ||||| ||||||||  |  | ||||| |||||||| ||||||||
Sbjct: 95640 agcatctgtgggtctcttcgcagtgaacacttcaagcagcatgat 95684



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 81/101 (80%)
 Strand = Plus / Plus

                                                                          
Query: 458    gcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacattgcatca 517
              ||||||||||| ||  ||||||||||||| | | ||| ||| ||| ||||||| ||||| 
Sbjct: 117915 gcaggaaatgcctgaagaacccactgcctgatgtttagttctcccacaaacatagcatct 117974

                                                       
Query: 518    gtgggtcttcttncggtgaagacttcaaggagcatgatccc 558
              || |||||  |  | ||||| |||||||| | |||||||||
Sbjct: 117975 gttggtctcttcgcagtgaacacttcaagcaacatgatccc 118015



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                          
Query: 470    tggtgaacccactgcctaagggttaattcacccccaaacattgcatcagtgggtcttctt 529
              |||| |||||||||||| | | | | ||| ||| ||||||| ||||| ||||||||| | 
Sbjct: 113725 tggtaaacccactgccttatgttcagttcccccacaaacatagcatctgtgggtcttttc 113784

                                           
Query: 530    ncggtgaagacttcaaggagcatgatccc 558
               | ||||| ||||| || |||||||||||
Sbjct: 113785 ccagtgaacacttcgagtagcatgatccc 113813



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 81/101 (80%)
 Strand = Plus / Plus

                                                                          
Query: 458    gcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacattgcatca 517
              ||||||||||| ||  ||||||||||||| | | ||| ||| ||| ||||||| ||||| 
Sbjct: 106612 gcaggaaatgcctgaagaacccactgcctgatgtttagttctcccacaaacatagcatct 106671

                                                       
Query: 518    gtgggtcttcttncggtgaagacttcaaggagcatgatccc 558
              || |||||  |  | ||||| |||||||| | |||||||||
Sbjct: 106672 gttggtctcttcgcagtgaacacttcaagcaacatgatccc 106712
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>gb|DQ355952.1| Oryza sativa (indica cultivar-group) cultivar Minghui 63 receptor
             kinase (MRKd) pseudogene, complete sequence; and receptor
             kinase MRKa (MRKa), bacterial blight resistance protein
             XA26 (Xa26), and receptor kinase MRKc (MRKc) genes,
             complete cds
          Length = 45529

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 85/105 (80%)
 Strand = Plus / Minus

                                                                         
Query: 451   aagctccgcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacat 510
             |||||| |||||||| || || |||||||||||||| | | | | ||| ||| |||||||
Sbjct: 24922 aagctctgcaggaaacgcctgttgaacccactgcctgatgttcagttctcccacaaacat 24863

                                                          
Query: 511   tgcatcagtgggtcttcttncggtgaagacttcaaggagcatgat 555
              ||||| ||||||||  |  | ||||| |||||||| ||||||||
Sbjct: 24862 agcatctgtgggtctcttcgcagtgaacacttcaagcagcatgat 24818
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 533     gtgaagacttcaaggagcatgat 555
               |||||||||||||||||||||||
Sbjct: 7080486 gtgaagacttcaaggagcatgat 7080464



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 536     aagacttcaaggagcatgat 555
               ||||||||||||||||||||
Sbjct: 7084325 aagacttcaaggagcatgat 7084306
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>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0452F10
          Length = 145120

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 533   gtgaagacttcaaggagcatgat 555
             |||||||||||||||||||||||
Sbjct: 68066 gtgaagacttcaaggagcatgat 68044



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 536   aagacttcaaggagcatgat 555
             ||||||||||||||||||||
Sbjct: 71905 aagacttcaaggagcatgat 71886
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>gb|AC168120.3| Mus musculus BAC clone RP23-49A14 from chromosome 3, complete sequence
          Length = 198651

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 375    gtagaagaaattcatcagccaattcacagc 404
              |||||||| ||||||||||| |||||||||
Sbjct: 197480 gtagaagagattcatcagcctattcacagc 197509
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>gb|AC163624.4| Mus musculus BAC clone RP24-558P12 from chromosome 3, complete sequence
          Length = 197711

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 375    gtagaagaaattcatcagccaattcacagc 404
              |||||||| ||||||||||| |||||||||
Sbjct: 135530 gtagaagagattcatcagcctattcacagc 135559
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>dbj|AK138166.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched
            library, clone:A230020C23 product:hypothetical protein,
            full insert sequence
          Length = 2323

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 375  gtagaagaaattcatcagccaattcacagc 404
            |||||||| ||||||||||| |||||||||
Sbjct: 1459 gtagaagagattcatcagcctattcacagc 1430
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>dbj|AK068182.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134H15, full
           insert sequence
          Length = 4506

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 81/101 (80%)
 Strand = Plus / Plus

                                                                       
Query: 458 gcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacattgcatca 517
           ||||||||||| ||  ||||||||||||| | | ||| ||| ||| ||||||| ||||| 
Sbjct: 598 gcaggaaatgcctgaagaacccactgcctgatgtttagttctcccacaaacatagcatct 657

                                                    
Query: 518 gtgggtcttcttncggtgaagacttcaaggagcatgatccc 558
           || |||||  |  | ||||| |||||||| | |||||||||
Sbjct: 658 gttggtctcttcgcagtgaacacttcaagcaacatgatccc 698
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>gb|AC140430.3| Mus musculus BAC clone RP24-105B23 from 3, complete sequence
          Length = 169012

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 375   gtagaagaaattcatcagccaattcacagc 404
             |||||||| ||||||||||| |||||||||
Sbjct: 47358 gtagaagagattcatcagcctattcacagc 47387
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>ref|NM_195473.1| Oryza sativa (japonica cultivar-group) putative leucine rich repeat
            containing protein kinase (OJ1004_F02.15), mRNA
          Length = 3201

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 83/104 (79%)
 Strand = Plus / Minus

                                                                        
Query: 452  agctccgcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacatt 511
            ||||| ||||||||||| |||  ||||||| ||||   | | | ||| ||| ||||||||
Sbjct: 2978 agctctgcaggaaatgcctggctaacccacagcctgttgttcagttctcccacaaacatt 2919

                                                        
Query: 512  gcatcagtgggtcttcttncggtgaagacttcaaggagcatgat 555
            ||||| || |||||  || | ||||| |||||||| ||||||||
Sbjct: 2918 gcatctgttggtctctttccagtgaacacttcaagcagcatgat 2875
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>gb|AC092387.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1004_F02
             map C8, complete sequence
          Length = 116304

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 83/104 (79%)
 Strand = Plus / Minus

                                                                         
Query: 452   agctccgcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacatt 511
             ||||| ||||||||||| |||  ||||||| ||||   | | | ||| ||| ||||||||
Sbjct: 73781 agctctgcaggaaatgcctggctaacccacagcctgttgttcagttctcccacaaacatt 73722

                                                         
Query: 512   gcatcagtgggtcttcttncggtgaagacttcaaggagcatgat 555
             ||||| || |||||  || | ||||| |||||||| ||||||||
Sbjct: 73721 gcatctgttggtctctttccagtgaacacttcaagcagcatgat 73678
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>emb|BX537348.8| Zebrafish DNA sequence from clone CH211-218O21 in linkage group 8,
             complete sequence
          Length = 207282

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 273   tgtactgtgctttgattttct 293
             |||||||||||||||||||||
Sbjct: 62202 tgtactgtgctttgattttct 62182
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>emb|BX324131.6| Zebrafish DNA sequence from clone CH211-119E14 in linkage group 7,
              complete sequence
          Length = 198318

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 487    aagggttaattcacccccaaa 507
              |||||||||||||||||||||
Sbjct: 139286 aagggttaattcacccccaaa 139306
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>gb|AC092172.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0014J14, complete sequence
          Length = 191397

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 83/104 (79%)
 Strand = Plus / Minus

                                                                         
Query: 452   agctccgcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacatt 511
             ||||| ||||||||||| |||  ||||||| ||||   | | | ||| ||| ||||||||
Sbjct: 42521 agctctgcaggaaatgcctggctaacccacagcctgttgttcagttctcccacaaacatt 42462

                                                         
Query: 512   gcatcagtgggtcttcttncggtgaagacttcaaggagcatgat 555
             ||||| || |||||  || | ||||| |||||||| ||||||||
Sbjct: 42461 gcatctgttggtctctttccagtgaacacttcaagcagcatgat 42418
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 83/104 (79%)
 Strand = Plus / Minus

                                                                           
Query: 452     agctccgcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacatt 511
               ||||| ||||||||||| |||  ||||||| ||||   | | | ||| ||| ||||||||
Sbjct: 7217163 agctctgcaggaaatgcctggctaacccacagcctgttgttcagttctcccacaaacatt 7217104

                                                           
Query: 512     gcatcagtgggtcttcttncggtgaagacttcaaggagcatgat 555
               ||||| || |||||  || | ||||| |||||||| ||||||||
Sbjct: 7217103 gcatctgttggtctctttccagtgaacacttcaagcagcatgat 7217060
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 83/104 (79%)
 Strand = Plus / Minus

                                                                           
Query: 452     agctccgcaggaaatgcatggtgaacccactgcctaagggttaattcacccccaaacatt 511
               ||||| ||||||||||| |||  ||||||| ||||   | | | ||| ||| ||||||||
Sbjct: 7220459 agctctgcaggaaatgcctggctaacccacagcctgttgttcagttctcccacaaacatt 7220400

                                                           
Query: 512     gcatcagtgggtcttcttncggtgaagacttcaaggagcatgat 555
               ||||| || |||||  || | ||||| |||||||| ||||||||
Sbjct: 7220399 gcatctgttggtctctttccagtgaacacttcaagcagcatgat 7220356
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>gb|AC025501.19| Mus musculus chromosome 10, clone RP23-129O23, complete sequence
          Length = 218156

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   tggcctctctttgtcctcca 190
             ||||||||||||||||||||
Sbjct: 25253 tggcctctctttgtcctcca 25272
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>ref|NM_188585.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3408

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 536  aagacttcaaggagcatgat 555
            ||||||||||||||||||||
Sbjct: 3137 aagacttcaaggagcatgat 3118
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>gb|AC158514.2| Mus musculus BAC clone RP24-480D16 from chromosome 12, complete
             sequence
          Length = 204825

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 463   aaatgcatggtgaacccactgcct 486
             ||||||||| ||||||||||||||
Sbjct: 69585 aaatgcatgttgaacccactgcct 69562
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>gb|AC090437.62| Mus musculus strain C57BL/6J clone rp23-11f20 map 6, complete sequence
          Length = 227127

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      cttatagcaaacttattaca 25
              ||||||||||||||||||||
Sbjct: 165815 cttatagcaaacttattaca 165796
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>gb|AC154903.4| Mus musculus BAC clone RP23-414E24 from chromosome 12, complete
             sequence
          Length = 201338

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 463   aaatgcatggtgaacccactgcct 486
             ||||||||| ||||||||||||||
Sbjct: 23750 aaatgcatgttgaacccactgcct 23773
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>gb|AC161603.4| Mus musculus BAC clone RP23-304M9 from chromosome 15, complete sequence
          Length = 199419

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 248    tttgatctctttgttgtctg 267
              ||||||||||||||||||||
Sbjct: 155629 tttgatctctttgttgtctg 155648
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>gb|AY050668.1| Homo sapiens PKC-potentiated PP1 inhibitory protein (PPP1R14A) gene,
              complete cds
          Length = 169660

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 169    gatggcctctctttgtcctccaga 192
              ||||||||||||||| ||||||||
Sbjct: 168210 gatggcctctctttgccctccaga 168233
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>gb|AC123074.2| Mus musculus BAC clone RP23-168H19 from 10, complete sequence
          Length = 210189

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 171  tggcctctctttgtcctcca 190
            ||||||||||||||||||||
Sbjct: 5682 tggcctctctttgtcctcca 5663
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>emb|CR385085.9| Zebrafish DNA sequence from clone CH211-195A16, complete sequence
          Length = 211060

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 280   tgctttgattttcttcaacg 299
             ||||||||||||||||||||
Sbjct: 27837 tgctttgattttcttcaacg 27856
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>dbj|AB232921.1| Oryzias latipes hox gene cluster, complete cds, contains hoxBb
          Length = 80562

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 20    attacatnactaaacgtaattat 42
             ||||||| |||||||||||||||
Sbjct: 36799 attacataactaaacgtaattat 36777
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>emb|BX321879.14| Zebrafish DNA sequence from clone CH211-147M4 in linkage group 6,
              complete sequence
          Length = 162923

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 280    tgctttgattttcttcaacg 299
              ||||||||||||||||||||
Sbjct: 155439 tgctttgattttcttcaacg 155458
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>gb|AC011479.7| Homo sapiens chromosome 19 clone CTB-102L5, complete sequence
          Length = 169661

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 169    gatggcctctctttgtcctccaga 192
              ||||||||||||||| ||||||||
Sbjct: 168211 gatggcctctctttgccctccaga 168234
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>dbj|AB126461.1| Bacillus halodurans gene for transposase A of IS643, transposase B
           of IS643
          Length = 2483

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 249 ttgatctctttgttgtctgt 268
           ||||||||||||||||||||
Sbjct: 572 ttgatctctttgttgtctgt 553
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>gb|AC011465.4|AC011465 Homo sapiens chromosome 19 clone CTC-450M9, complete sequence
          Length = 156997

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 169    gatggcctctctttgtcctccaga 192
              ||||||||||||||| ||||||||
Sbjct: 117774 gatggcctctctttgccctccaga 117751
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>emb|BX004768.5| Zebrafish DNA sequence from clone CH211-15L16, complete sequence
          Length = 180305

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 280    tgctttgattttcttcaacg 299
              ||||||||||||||||||||
Sbjct: 166268 tgctttgattttcttcaacg 166287
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>emb|BX294124.8| Mouse DNA sequence from clone RP23-80H12 on chromosome X, complete
              sequence
          Length = 181854

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    ctttgtcctccagaagcacc 198
              ||||||||||||||||||||
Sbjct: 136852 ctttgtcctccagaagcacc 136833
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>gb|AC142415.4| Mus musculus BAC clone RP23-155F24 from 10, complete sequence
          Length = 209693

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 171    tggcctctctttgtcctcca 190
              ||||||||||||||||||||
Sbjct: 158459 tggcctctctttgtcctcca 158440
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>emb|AL589876.11| Mouse DNA sequence from clone RP23-117O11 on chromosome 2, complete
              sequence
          Length = 221782

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      cttatagcaaacttattaca 25
              ||||||||||||||||||||
Sbjct: 115578 cttatagcaaacttattaca 115597
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>gb|L09718.1|FCLCAPSIDA Feline calicivirus capsid protein gene, complete cds
          Length = 2395

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 421  ttgtagtatctggccatccg 440
            ||||||||||||||||||||
Sbjct: 1299 ttgtagtatctggccatccg 1280


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,691,997
Number of Sequences: 3902068
Number of extensions: 4691997
Number of successful extensions: 82113
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81890
Number of HSP's gapped (non-prelim): 218
length of query: 558
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 535
effective length of database: 17,143,297,704
effective search space: 9171664271640
effective search space used: 9171664271640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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