ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah63k11 |
|---|---|
| Clone Library Name | barley_pub |
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 321 bits (823), Expect = 9e-88 Identities = 157/157 (100%), Positives = 157/157 (100%) Frame = -2 Query: 611 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQS 432 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQS Sbjct: 269 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQS 328 Query: 431 IDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLV 252 IDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLV Sbjct: 329 IDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLV 388 Query: 251 QEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 141 QEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK Sbjct: 389 QEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 425
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 288 bits (737), Expect = 9e-78 Identities = 135/157 (85%), Positives = 149/157 (94%) Frame = -2 Query: 611 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQS 432 VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV DE+VV++VDTFPGQS Sbjct: 272 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQS 331 Query: 431 IDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLV 252 IDFFGALRARVYDDEVRKWVG G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLV Sbjct: 332 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 391 Query: 251 QEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 141 QEQ+NVKRVQLAD Y+S+AALG AN DAMKTG+FYGK Sbjct: 392 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGK 428
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 287 bits (734), Expect = 2e-77 Identities = 135/156 (86%), Positives = 149/156 (95%) Frame = -2 Query: 611 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQS 432 VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DR+GVCKGIFRTDNVPDE +V++VD+FPGQS Sbjct: 272 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQS 331 Query: 431 IDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLV 252 IDFFGALRARVYDDEVRKWV + GVENI KRLVNSREGPP F+QPKMTIEKL+EYG+MLV Sbjct: 332 IDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLV 391 Query: 251 QEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 144 +EQENVKRVQLA++YLSEAALG AN DAMKTG+FYG Sbjct: 392 KEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 427
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 283 bits (724), Expect = 3e-76 Identities = 134/155 (86%), Positives = 149/155 (96%) Frame = -2 Query: 611 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQS 432 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTD V +E VV+LVDTFPGQS Sbjct: 278 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQS 337 Query: 431 IDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLV 252 IDFFGALRARVYDDEVR+WV E GVENI+++LVNS+EGPPTF+QPK+TIEKL+EYGHMLV Sbjct: 338 IDFFGALRARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLV 397 Query: 251 QEQENVKRVQLADKYLSEAALGQANDDAMKTGAFY 147 EQENVKRVQLADKYL+EAALG+AN+DAMKTG+F+ Sbjct: 398 AEQENVKRVQLADKYLNEAALGEANEDAMKTGSFF 432
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 278 bits (712), Expect = 7e-75 Identities = 133/156 (85%), Positives = 145/156 (92%) Frame = -2 Query: 611 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQS 432 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIFR+DNV E +V+LVDTFPGQS Sbjct: 282 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQS 341 Query: 431 IDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLV 252 IDFFGALRARVYDDEVRKW+ +GV++I K+LVNS+EGPPTF+QPKMTIEKL+EYG+MLV Sbjct: 342 IDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLV 401 Query: 251 QEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 144 QEQENVKRVQLADKYLSEAALG AN DAM TG FYG Sbjct: 402 QEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 276 bits (707), Expect = 3e-74 Identities = 131/156 (83%), Positives = 145/156 (92%) Frame = -2 Query: 611 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQS 432 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNV D+ +V+LVDTFPGQS Sbjct: 282 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQS 341 Query: 431 IDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLV 252 IDFFGALRARVY DEVRKWV E+GV+ I K+LVNS+EGPP+F+QPKMTI+KL+ YG MLV Sbjct: 342 IDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLV 401 Query: 251 QEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 144 QEQENVKRVQLADKY+SEAALG AN+DA+K G FYG Sbjct: 402 QEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYG 437
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 276 bits (706), Expect = 3e-74 Identities = 129/154 (83%), Positives = 145/154 (94%) Frame = -2 Query: 611 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQS 432 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVP+E +V++VD FPGQS Sbjct: 282 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQS 341 Query: 431 IDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLV 252 IDFFGALRARVYDDEVRKWV E+GV+ I K+LVNS+EGPPTF+QPKMTI+KL++YG+MLV Sbjct: 342 IDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLV 401 Query: 251 QEQENVKRVQLADKYLSEAALGQANDDAMKTGAF 150 +EQENVKRVQLADKY+SEAALG AN DA+K G F Sbjct: 402 EEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 271 bits (694), Expect = 8e-73 Identities = 124/155 (80%), Positives = 146/155 (94%) Frame = -2 Query: 611 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQS 432 VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DR+GVCKGIFRTD VP+E + +LVDTFPGQS Sbjct: 284 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQS 343 Query: 431 IDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLV 252 IDFFGALRARVYDDEVRKW+ +GV+ K+LVNS+EGPPTFDQPKM+++KL++YG+MLV Sbjct: 344 IDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLV 403 Query: 251 QEQENVKRVQLADKYLSEAALGQANDDAMKTGAFY 147 QEQENVKRVQLADKYL+EAALG AN+DA+K+G+F+ Sbjct: 404 QEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 268 bits (685), Expect = 9e-72 Identities = 127/152 (83%), Positives = 142/152 (93%) Frame = -2 Query: 611 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQS 432 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVP+EAVV++VD+FPGQS Sbjct: 281 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQS 340 Query: 431 IDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLV 252 IDFFGALRARVYDDEVRKWV G+E I ++L+NSR+GPPTF+QPKMT+EKL+EYG+MLV Sbjct: 341 IDFFGALRARVYDDEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLV 400 Query: 251 QEQENVKRVQLADKYLSEAALGQANDDAMKTG 156 QEQENVKRVQLA+ YL EAALG AN DA+ TG Sbjct: 401 QEQENVKRVQLAETYLKEAALGDANADAINTG 432
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 268 bits (684), Expect = 1e-71 Identities = 127/154 (82%), Positives = 141/154 (91%) Frame = -2 Query: 611 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQS 432 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVP+EAV+++VDTFPGQS Sbjct: 286 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQS 345 Query: 431 IDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLV 252 IDFFGALRARVYDDEVRKWV G+E I +L+NS +GPPTF+QPKMT+EKL+EYG+MLV Sbjct: 346 IDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLV 405 Query: 251 QEQENVKRVQLADKYLSEAALGQANDDAMKTGAF 150 QEQENVKRVQLA+ YL EAALG AN DA+ TG F Sbjct: 406 QEQENVKRVQLAETYLKEAALGDANADAINTGNF 439
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 265 bits (678), Expect = 6e-71 Identities = 127/155 (81%), Positives = 139/155 (89%) Frame = -2 Query: 611 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQS 432 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIFRTDNVP E VV++VD FPGQS Sbjct: 286 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQS 345 Query: 431 IDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLV 252 IDFFGALRARVYDDEVRKWV G+E I +L+NS +GPPTF+QPKMTIEKL+EYG+MLV Sbjct: 346 IDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLV 405 Query: 251 QEQENVKRVQLADKYLSEAALGQANDDAMKTGAFY 147 QEQENVKRVQLADKYL EAALG AN DA+ G+F+ Sbjct: 406 QEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 265 bits (678), Expect = 6e-71 Identities = 124/157 (78%), Positives = 141/157 (89%) Frame = -2 Query: 611 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQS 432 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIF+TD VP E VV+LVD FPGQS Sbjct: 280 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQS 339 Query: 431 IDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLV 252 IDFFGALRARVY DEVRKWV +GV+N+ K+LVNS++GPP F+QP+MT++KLMEYG+MLV Sbjct: 340 IDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLV 399 Query: 251 QEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 141 QEQENVKRVQLAD+Y+S AALG AN DA+ G F+GK Sbjct: 400 QEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFGK 436
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 265 bits (677), Expect = 8e-71 Identities = 123/155 (79%), Positives = 143/155 (92%) Frame = -2 Query: 611 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQS 432 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTD VP++ +V LVD PGQS Sbjct: 286 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQS 345 Query: 431 IDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLV 252 IDFFGALRARVYDDEVRKW+ +GV+++ K+LVNS+EGPPTFDQPKMT++KL+ Y MLV Sbjct: 346 IDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLV 405 Query: 251 QEQENVKRVQLADKYLSEAALGQANDDAMKTGAFY 147 QEQENVKRVQLAD+YL+EAALG AN+DA+K+G+F+ Sbjct: 406 QEQENVKRVQLADQYLNEAALGNANEDAIKSGSFF 440
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 263 bits (673), Expect = 2e-70 Identities = 128/156 (82%), Positives = 138/156 (88%) Frame = -2 Query: 608 TGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSI 429 TGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTD + DE +V LVD FPGQSI Sbjct: 283 TGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSI 342 Query: 428 DFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQ 249 DFFGALRARVYDDEVRK+V +GVE I KRLVNSREGPP F+QP+MT EKLMEYG+MLV Sbjct: 343 DFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVM 402 Query: 248 EQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 141 EQENVKRVQLA+ YLS+AALG AN DA+ G FYGK Sbjct: 403 EQENVKRVQLAETYLSQAALGDANADAIGRGTFYGK 438
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 231 bits (588), Expect = 2e-60 Identities = 109/131 (83%), Positives = 119/131 (90%) Frame = -2 Query: 611 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQS 432 VTGNDFSTLYAPLIRDGRM+KFYWAPTREDRIG+C GIFRTD VP E +V+LVDTFPGQS Sbjct: 279 VTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQS 338 Query: 431 IDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLV 252 IDFFGALRARVYDDEVRKW +GVE I + LVNS+E PPTFDQPKMTIEKL+EYG+MLV Sbjct: 339 IDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLV 398 Query: 251 QEQENVKRVQL 219 EQENVKRV+L Sbjct: 399 MEQENVKRVKL 409
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 189 bits (479), Expect = 7e-48 Identities = 95/140 (67%), Positives = 109/140 (77%) Frame = -2 Query: 608 TGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSI 429 TGNDFSTLYAPLIRDGRMEK+YW PTREDRIGVC GIF+ DNV V LVDTFPGQSI Sbjct: 256 TGNDFSTLYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSI 315 Query: 428 DFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQ 249 DFFGALRARVYDD VR+W+ + GV+ I ++LVN+R+ + M + L++YG LV Sbjct: 316 DFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVD 374 Query: 248 EQENVKRVQLADKYLSEAAL 189 EQENVKRVQLAD YLS A L Sbjct: 375 EQENVKRVQLADAYLSGAEL 394
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 167 bits (422), Expect = 3e-41 Identities = 74/135 (54%), Positives = 102/135 (75%) Frame = -2 Query: 611 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQS 432 VTGNDFSTLYAPLIRDGRMEKFYW P R++++G+ GIF D + V +LVD+FP QS Sbjct: 155 VTGNDFSTLYAPLIRDGRMEKFYWEPHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQS 214 Query: 431 IDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLV 252 IDFF ALR+R+YD+++R ++ ++G EN+S R+VNS EGPP F +P T+ L+E + +V Sbjct: 215 IDFFSALRSRIYDEQIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMV 274 Query: 251 QEQENVKRVQLADKY 207 EQ+ ++ QL D+Y Sbjct: 275 AEQKRIETSQLVDEY 289
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 162 bits (410), Expect = 7e-40 Identities = 74/135 (54%), Positives = 100/135 (74%) Frame = -2 Query: 611 VTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQS 432 VTGNDFSTLYAPLIRDGRMEKFYW P R+D++G+ GIF D + + +LVDTFP QS Sbjct: 155 VTGNDFSTLYAPLIRDGRMEKFYWEPNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQS 214 Query: 431 IDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLV 252 IDFF ALR+R+YD ++R ++ ++G E IS R+VNS E PP F +P ++ L+E G++++ Sbjct: 215 IDFFSALRSRIYDIQIRDFIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVL 274 Query: 251 QEQENVKRVQLADKY 207 EQ+ V QL D+Y Sbjct: 275 GEQQRVDNSQLVDEY 289
>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast (RuBisCO activase) (RA) (Fragments) Length = 32 Score = 51.6 bits (122), Expect = 2e-06 Identities = 30/60 (50%), Positives = 31/60 (51%) Frame = -2 Query: 458 LVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEK 279 LVDTFPGQSIDFFGAL REGPPTF+QP MTIEK Sbjct: 1 LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32
>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell| protein 0) Length = 532 Score = 32.7 bits (73), Expect = 0.86 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = -1 Query: 345 QAPRQLEGGAAHVRPAQDDHREAHGVRPHAGPGAGERQACAARRQVPQ 202 QAPRQ + A RP G RP A PG R++ RR+ P+ Sbjct: 250 QAPRQEDSRPARARPGPPTRGRRRGRRP-AAPGPASRRSARLRRRQPR 296
>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0| Length = 532 Score = 32.7 bits (73), Expect = 0.86 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = -1 Query: 345 QAPRQLEGGAAHVRPAQDDHREAHGVRPHAGPGAGERQACAARRQVPQ 202 QAPRQ + A RP G RP A PG R++ RR+ P+ Sbjct: 250 QAPRQEDSRPARARPGPPTRGRRRGRRP-AAPGPASRRSARLRRRQPR 296
>TRPA_BORPE (Q7VTF0) Tryptophan synthase alpha chain (EC 4.2.1.20)| Length = 285 Score = 31.6 bits (70), Expect = 1.9 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +3 Query: 474 VRDVVGAEDALAHADAVLAGGRPVELLHAPVTDQGSVQRRE 596 +RD A+ AHADAV+ G + +E + G+ Q+ E Sbjct: 218 IRDAASAQRIAAHADAVVIGSKLIETMEQAGAQAGADQKNE 258
>TRPA_BORPA (Q7W5G9) Tryptophan synthase alpha chain (EC 4.2.1.20)| Length = 285 Score = 31.6 bits (70), Expect = 1.9 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +3 Query: 474 VRDVVGAEDALAHADAVLAGGRPVELLHAPVTDQGSVQRRE 596 +RD A+ AHADAV+ G + +E + G+ Q+ E Sbjct: 218 IRDAASAQRIAAHADAVVIGSKLIETMEQTGAQAGADQKNE 258
>TRPA_BORBR (Q7WD05) Tryptophan synthase alpha chain (EC 4.2.1.20)| Length = 285 Score = 31.6 bits (70), Expect = 1.9 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +3 Query: 474 VRDVVGAEDALAHADAVLAGGRPVELLHAPVTDQGSVQRRE 596 +RD A+ AHADAV+ G + +E + G+ Q+ E Sbjct: 218 IRDAASAQRIAAHADAVVIGSKLIETMEQAGAQAGADQKNE 258
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) Length = 940 Score = 30.4 bits (67), Expect = 4.2 Identities = 30/117 (25%), Positives = 36/117 (30%), Gaps = 3/117 (2%) Frame = -1 Query: 504 GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLE 325 GH PH + PG G G + GH P H + Sbjct: 751 GHRPH-EGPGGGMGNSSGHRPHEGPGSGMGSGHRPHEGPGSSMGGGGGHRPHEGPGGGIS 809 Query: 324 GGAAHVRPAQDDHR---EAHGVRPHAGPGAGERQACAARRQVPQRGGARPSQRRRHE 163 GG+ H RP + G RPH GPG G R G P R H+ Sbjct: 810 GGSGH-RPHEGPGGGMGAGGGHRPHEGPG-GSMGGSGGHRPHEGPGHGGPHGHRPHD 864 Score = 30.0 bits (66), Expect = 5.6 Identities = 25/87 (28%), Positives = 29/87 (33%), Gaps = 1/87 (1%) Frame = -1 Query: 504 GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLE 325 GH PH + PG G G GGH P + P Sbjct: 813 GHRPH-EGPGGGMGAGGGHRPH-------------------------------EGPGGSM 840 Query: 324 GGAAHVRPAQDD-HREAHGVRPHAGPG 247 GG+ RP + H HG RPH PG Sbjct: 841 GGSGGHRPHEGPGHGGPHGHRPHDVPG 867
>IF2_TROWT (Q83GT8) Translation initiation factor IF-2| Length = 803 Score = 30.4 bits (67), Expect = 4.2 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = -1 Query: 588 AVRSPDP*RAHGEVLLGAHPRGPHRRVQGHLPHRQRPGRGRGEAG 454 A + P +A G+ P HRRV LP ++ P RGRG G Sbjct: 129 ATKRPVKFKAEGD----KKPASTHRRVPAPLPQKRTPLRGRGAPG 169
>IF2_TROW8 (Q83HG7) Translation initiation factor IF-2| Length = 803 Score = 30.4 bits (67), Expect = 4.2 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = -1 Query: 588 AVRSPDP*RAHGEVLLGAHPRGPHRRVQGHLPHRQRPGRGRGEAG 454 A + P +A G+ P HRRV LP ++ P RGRG G Sbjct: 129 ATKRPVKFKAEGD----KKPASTHRRVPAPLPQKRTPLRGRGAPG 169
>ABL_DROME (P00522) Tyrosine-protein kinase Abl (EC 2.7.10.2) (Abelson| protein) (D-ash) Length = 1620 Score = 30.4 bits (67), Expect = 4.2 Identities = 15/29 (51%), Positives = 17/29 (58%) Frame = -3 Query: 445 SRGSPSTSSARCGHGCTTTRCASGSARSA 359 S +PSTS G G TTT ASG A S+ Sbjct: 647 SSSAPSTSGVATGGGATTTTAASGCASSS 675
>DNAA_STRAW (Q82FD8) Chromosomal replication initiator protein dnaA| Length = 653 Score = 30.4 bits (67), Expect = 4.2 Identities = 19/59 (32%), Positives = 24/59 (40%) Frame = -1 Query: 336 RQLEGGAAHVRPAQDDHREAHGVRPHAGPGAGERQACAARRQVPQRGGARPSQRRRHED 160 R EG + R DDHR+ H R GPG + P RG P+ R + D Sbjct: 125 RGREGYEGYGRHRADDHRQGHNDRHQGGPG---------DQLPPSRGDQLPTARPAYPD 174
>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 940 Score = 30.0 bits (66), Expect = 5.6 Identities = 25/87 (28%), Positives = 29/87 (33%), Gaps = 1/87 (1%) Frame = -1 Query: 504 GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLE 325 GH PH + PG G G GGH P + P Sbjct: 812 GHRPH-EGPGGGMGAGGGHRPH-------------------------------EGPGGSM 839 Query: 324 GGAAHVRPAQ-DDHREAHGVRPHAGPG 247 GG+ RP + H HG RPH PG Sbjct: 840 GGSGGHRPHEGPGHGGPHGHRPHDVPG 866
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 30.0 bits (66), Expect = 5.6 Identities = 25/87 (28%), Positives = 29/87 (33%), Gaps = 1/87 (1%) Frame = -1 Query: 504 GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLE 325 GH PH + PG G G GGH P + P Sbjct: 812 GHRPH-EGPGGGMGAGGGHRPH-------------------------------EGPGGSM 839 Query: 324 GGAAHVRPAQDD-HREAHGVRPHAGPG 247 GG+ RP + H HG RPH PG Sbjct: 840 GGSGGHRPHEGPGHGGPHGHRPHDVPG 866 Score = 29.6 bits (65), Expect = 7.2 Identities = 30/117 (25%), Positives = 36/117 (30%), Gaps = 3/117 (2%) Frame = -1 Query: 504 GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLE 325 GH PH + PG G G + GH P H + Sbjct: 750 GHRPH-EGPGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPGGSMGGGGGHRPHEGPGGGIS 808 Query: 324 GGAAHVRPAQDDHR---EAHGVRPHAGPGAGERQACAARRQVPQRGGARPSQRRRHE 163 GG+ H RP + G RPH GPG G R G P R H+ Sbjct: 809 GGSGH-RPHEGPGGGMGAGGGHRPHEGPG-GSMGGSGGHRPHEGPGHGGPHGHRPHD 863
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 29.3 bits (64), Expect = 9.5 Identities = 29/92 (31%), Positives = 31/92 (33%), Gaps = 4/92 (4%) Frame = -1 Query: 504 GHLPHRQRPGRGRGEAGGHLP--GAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQ 331 GH PH + PG G G GGH P G H G H P Sbjct: 813 GHRPH-EGPGGGMGAGGGHRPHEGPGH-----------------------GGPHGHRPHD 848 Query: 330 LEGGAAHVRPAQDDHR--EAHGVRPHAGPGAG 241 + G H DHR H R H GPG G Sbjct: 849 VPGHRGH------DHRGPPPHEHRGHDGPGHG 874
>DYHC_DROME (P37276) Dynein heavy chain, cytosolic (DYHC)| Length = 4639 Score = 29.3 bits (64), Expect = 9.5 Identities = 16/50 (32%), Positives = 28/50 (56%) Frame = -2 Query: 515 GVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGE 366 G+C+ I D++P E +VRL + +++ F + R+ DD R+W E Sbjct: 2790 GICEAIRPLDSLPVEGLVRL---WAHEALRLF---QDRLVDDSERRWTNE 2833 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,463,646 Number of Sequences: 219361 Number of extensions: 1584113 Number of successful extensions: 5596 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 5281 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5581 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
