ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63k09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|BX324186.12| Zebrafish DNA sequence from clone DKEY-18B8 in ... 48 0.006
2emb|AL596026.13| Zebrafish DNA sequence from clone BUSM1-234G15 ... 42 0.35
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.35
4dbj|AP006187.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.35
5dbj|AP008220.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.35
6gb|AC116494.8| Mus musculus chromosome 7, clone RP24-291G23, com... 40 1.4
7gb|AC147888.2| Xenopus tropicalis clone CH216-151M23, complete s... 40 1.4
8gb|AC157096.9| Mus musculus 6 BAC RP24-369J3 (Roswell Park Cance... 40 1.4
9gb|AC114563.12| Mus musculus chromosome 7, clone RP23-56E5, comp... 40 1.4
10gb|AC110236.8| Mus musculus chromosome 15, clone RP23-104L4, com... 40 1.4
11gb|AC006067.4| Arabidopsis thaliana chromosome 2 clone T13P21 ma... 40 1.4
12gb|AC005398.3| Arabidopsis thaliana chromosome 2 clone T6B13 map... 40 1.4
13gb|AC091549.11| Homo sapiens chromosome 8, clone RP11-343D20, co... 40 1.4
14gb|AF167425.1| Lycopersicon esculentum 1-aminocyclopropane-1-car... 40 1.4
15gb|AC090155.10| Homo sapiens chromosome 8, clone RP11-738G5, com... 40 1.4
16gb|AC147237.3| Mus musculus BAC clone RP23-370E6 from 3, complet... 40 1.4
17emb|AL671338.15| Mouse DNA sequence from clone RP23-113J9 on chr... 40 1.4
18gb|AC102381.12| Mus musculus chromosome 8, clone RP24-180I19, co... 38 5.4
19gb|AC119269.9| Mus musculus chromosome 5, clone RP24-324B22, com... 38 5.4
20gb|AC122888.5| Mus musculus BAC clone RP23-93F11 from chromosome... 38 5.4
21gb|AC007818.8| Drosophila melanogaster clone BACR02M05, complete... 38 5.4
22gb|AC131798.3| Mus musculus BAC clone RP24-497K17 from chromosom... 38 5.4
23gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 38 5.4
24gb|AC117678.16| Mus musculus chromosome 6, clone RP23-421M9, com... 38 5.4
25gb|AC068760.12| Homo sapiens 3 BAC RP11-420J11 (Roswell Park Can... 38 5.4
26gb|AC121774.3| Mus musculus BAC clone RP23-350E1 from chromosome... 38 5.4
27gb|AC124314.7| Mus musculus chromosome 10, clone RP23-193B6, com... 38 5.4
28emb|AL603755.4| Human DNA sequence from clone RP11-136G2 on chro... 38 5.4
29emb|AL445250.4| Human DNA sequence from clone RP11-199A24 on chr... 38 5.4
30emb|AL391137.11| Human DNA sequence from clone RP11-144G6 on chr... 38 5.4
31emb|AL358972.13| Human DNA sequence from clone RP11-347L18 on ch... 38 5.4
32emb|AL354808.24| Human DNA sequence from clone RP11-523H24 on ch... 38 5.4
33emb|AL139327.18| Human DNA sequence from clone RP11-408E5 on chr... 38 5.4
34gb|AC133932.4| Oryza sativa chromosome 3 BAC OSJNBb0074M06 genom... 38 5.4
35emb|Z97341.2|ATFCA6 Arabidopsis thaliana DNA chromosome 4, ESSA ... 38 5.4
36emb|AL161544.2|ATCHRIV44 Arabidopsis thaliana DNA chromosome 4, ... 38 5.4
37emb|AL714016.8| Mouse DNA sequence from clone RP23-229J16 on chr... 38 5.4
38emb|AL669928.8| Mouse DNA sequence from clone RP23-76F22 on chro... 38 5.4
39gb|AC112693.5| Homo sapiens chromosome 15, clone RP11-326A13, co... 38 5.4
40emb|BX323861.10| Zebrafish DNA sequence from clone CH211-209F23 ... 38 5.4
41gb|AF336378.1| Mus musculus Kel blood group protein (Kel), epith... 38 5.4
42gb|AC092812.2| Homo sapiens chromosome 1 clone RP11-536F12, comp... 38 5.4
43emb|BX664714.16| Zebrafish DNA sequence from clone DKEY-204C3 in... 38 5.4
44gb|AC006551.6|AC006551 Arabidopsis thaliana chromosome I BAC F12... 38 5.4
45gb|AC148663.1| Macaca mulatta Major Histocompatibility Complex B... 38 5.4
46gb|AC148661.1| Macaca mulatta Major Histocompatibility Complex B... 38 5.4
47dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.4
48gb|AC008217.5|AC008217 Drosophila melanogaster, chromosome 3R, r... 38 5.4
49gb|AC008253.8|AC008253 Drosophila melanogaster, chromosome 3R, r... 38 5.4
50gb|AC007645.4|AC007645 Drosophila melanogaster, chromosome 3R, r... 38 5.4
51gb|AC154845.2| Mus musculus BAC clone RP23-48E18 from chromosome... 38 5.4
52gb|AC010148.13| Homo sapiens BAC clone RP11-367B19 from 2, compl... 38 5.4
53gb|AC023051.21|AC023051 Homo sapiens 12 BAC RP11-666F17 (Roswell... 38 5.4
54gb|AC121540.14| Mus musculus chromosome 3, clone RP23-48L9, comp... 38 5.4
55gb|AE003762.4| Drosophila melanogaster chromosome 3R, section 10... 38 5.4
56gb|AE003689.2| Drosophila melanogaster chromosome 3R, section 27... 38 5.4
57emb|AL929161.10| Zebrafish DNA sequence from clone CH211-93A19, ... 38 5.4
58gb|AC155158.15| Mus musculus chromosome 3, clone RP24-70L3, comp... 38 5.4
59emb|AL772138.15| Mouse DNA sequence from clone RP23-213F17 on ch... 38 5.4
60gb|AC152951.2| Mus musculus 10 BAC RP23-451J19 (Roswell Park Can... 38 5.4
61emb|AL808120.9| Mouse DNA sequence from clone RP23-418E2 on chro... 38 5.4 
>emb|BX324186.12| Zebrafish DNA sequence from clone DKEY-18B8 in linkage group 17,
             complete sequence
          Length = 153540

 Score = 48.1 bits (24), Expect = 0.006
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 57    ttaattaagaatatatatgcatgt 80
             ||||||||||||||||||||||||
Sbjct: 76530 ttaattaagaatatatatgcatgt 76507
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>emb|AL596026.13| Zebrafish DNA sequence from clone BUSM1-234G15 in linkage group 17
             Contains the sly1 gene for suppressor of ypt1, a novel
             gene similar to AP4 (adaptor-related protein complex 4,
             sigma subunit), the 3' part of the strn3 gene for
             striatin, calmodulin binding protein 3, a novel gene
             similar to COCH (coagulation factor C homolog, cochlin), a
             gene for a novel 7 transmembrane receptor (rhodopsin
             family) and a novel gene similar to KIAA1333, complete
             sequence
          Length = 127993

 Score = 42.1 bits (21), Expect = 0.35
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 57    ttaattaagaatatatatgcatgta 81
             ||||||||||||||||||| |||||
Sbjct: 85687 ttaattaagaatatatatgtatgta 85663
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 0.35
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 59       aattaagaatatatatgcatg 79
                |||||||||||||||||||||
Sbjct: 35947858 aattaagaatatatatgcatg 35947878
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>dbj|AP006187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0264G11
          Length = 55919

 Score = 42.1 bits (21), Expect = 0.35
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 59    aattaagaatatatatgcatg 79
             |||||||||||||||||||||
Sbjct: 54027 aattaagaatatatatgcatg 54047
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>dbj|AP008220.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
             fosmid clone:OSJNOa246I10
          Length = 27635

 Score = 42.1 bits (21), Expect = 0.35
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 59    aattaagaatatatatgcatg 79
             |||||||||||||||||||||
Sbjct: 20750 aattaagaatatatatgcatg 20770
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>gb|AC116494.8| Mus musculus chromosome 7, clone RP24-291G23, complete sequence
          Length = 201187

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 50     agttcagttaattaagaatatata 73
              ||||||||||||||| ||||||||
Sbjct: 165591 agttcagttaattaaaaatatata 165568
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>gb|AC147888.2| Xenopus tropicalis clone CH216-151M23, complete sequence
          Length = 146657

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     agttaattaagaatatatat 74
              ||||||||||||||||||||
Sbjct: 121275 agttaattaagaatatatat 121256
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>gb|AC157096.9| Mus musculus 6 BAC RP24-369J3 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 175080

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 58    taattaagaatatatatgcatgta 81
             ||||||| ||||||||||||||||
Sbjct: 60094 taattaaaaatatatatgcatgta 60117
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>gb|AC114563.12| Mus musculus chromosome 7, clone RP23-56E5, complete sequence
          Length = 166508

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 50     agttcagttaattaagaatatata 73
              ||||||||||||||| ||||||||
Sbjct: 147656 agttcagttaattaaaaatatata 147679
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>gb|AC110236.8| Mus musculus chromosome 15, clone RP23-104L4, complete sequence
          Length = 233499

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     agaatatatatgcatgtaca 83
              ||||||||||||||||||||
Sbjct: 151936 agaatatatatgcatgtaca 151917
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>gb|AC006067.4| Arabidopsis thaliana chromosome 2 clone T13P21 map mi398, complete
             sequence
          Length = 126337

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    agttaattaagaatatatat 74
             ||||||||||||||||||||
Sbjct: 10148 agttaattaagaatatatat 10129
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>gb|AC005398.3| Arabidopsis thaliana chromosome 2 clone T6B13 map mi398, complete
             sequence
          Length = 92524

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    agttaattaagaatatatat 74
             ||||||||||||||||||||
Sbjct: 86537 agttaattaagaatatatat 86518
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>gb|AC091549.11| Homo sapiens chromosome 8, clone RP11-343D20, complete sequence
          Length = 179187

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    taattaagaatatatatgca 77
             ||||||||||||||||||||
Sbjct: 48715 taattaagaatatatatgca 48696
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>gb|AF167425.1| Lycopersicon esculentum 1-aminocyclopropane-1-carboxylate synthase
            (ACS5) and LE5-7.2 genes, complete cds
          Length = 14362

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   attaagaatatatatgcatg 79
            ||||||||||||||||||||
Sbjct: 6407 attaagaatatatatgcatg 6426
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>gb|AC090155.10| Homo sapiens chromosome 8, clone RP11-738G5, complete sequence
          Length = 192053

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    taattaagaatatatatgca 77
             ||||||||||||||||||||
Sbjct: 38628 taattaagaatatatatgca 38647
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>gb|AC147237.3| Mus musculus BAC clone RP23-370E6 from 3, complete sequence
          Length = 175691

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     agaatatatatgcatgtaca 83
              ||||||||||||||||||||
Sbjct: 104298 agaatatatatgcatgtaca 104279
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>emb|AL671338.15| Mouse DNA sequence from clone RP23-113J9 on chromosome 4, complete
             sequence
          Length = 172327

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 61    ttaagaatatatatgcatgtacaa 84
             ||||||||||||||| ||||||||
Sbjct: 94943 ttaagaatatatatgtatgtacaa 94920
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>gb|AC102381.12| Mus musculus chromosome 8, clone RP24-180I19, complete sequence
          Length = 190298

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 38    acaaaaggggcaagttcag 56
             |||||||||||||||||||
Sbjct: 66013 acaaaaggggcaagttcag 65995
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>gb|AC119269.9| Mus musculus chromosome 5, clone RP24-324B22, complete sequence
          Length = 172282

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 61    ttaagaatatatatgcatgtaca 83
             |||||||||||| ||||||||||
Sbjct: 21345 ttaagaatatatttgcatgtaca 21323
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>gb|AC122888.5| Mus musculus BAC clone RP23-93F11 from chromosome 3, complete sequence
          Length = 206760

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 65    gaatatatatgcatgtaca 83
             |||||||||||||||||||
Sbjct: 38351 gaatatatatgcatgtaca 38369
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>gb|AC007818.8| Drosophila melanogaster clone BACR02M05, complete sequence
          Length = 188549

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 33     ccattacaaaaggggcaagttca 55
              ||||||||||||| |||||||||
Sbjct: 146707 ccattacaaaaggcgcaagttca 146729
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>gb|AC131798.3| Mus musculus BAC clone RP24-497K17 from chromosome 1, complete sequence
          Length = 142333

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 65    gaatatatatgcatgtaca 83
             |||||||||||||||||||
Sbjct: 50124 gaatatatatgcatgtaca 50106
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 60       attaagaatatatatgcat 78
                |||||||||||||||||||
Sbjct: 16387644 attaagaatatatatgcat 16387626
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>gb|AC117678.16| Mus musculus chromosome 6, clone RP23-421M9, complete sequence
          Length = 204437

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 66     aatatatatgcatgtacaa 84
              |||||||||||||||||||
Sbjct: 133471 aatatatatgcatgtacaa 133453
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>gb|AC068760.12| Homo sapiens 3 BAC RP11-420J11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 193208

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 33     ccattacaaaaggggcaag 51
              |||||||||||||||||||
Sbjct: 164497 ccattacaaaaggggcaag 164479
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>gb|AC121774.3| Mus musculus BAC clone RP23-350E1 from chromosome 5, complete sequence
          Length = 191733

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 61     ttaagaatatatatgcatgtaca 83
              |||||||||||| ||||||||||
Sbjct: 159645 ttaagaatatatttgcatgtaca 159623
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>gb|AC124314.7| Mus musculus chromosome 10, clone RP23-193B6, complete sequence
          Length = 232720

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 65    gaatatatatgcatgtaca 83
             |||||||||||||||||||
Sbjct: 27800 gaatatatatgcatgtaca 27818
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>emb|AL603755.4| Human DNA sequence from clone RP11-136G2 on chromosome 6, complete
             sequence
          Length = 167565

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 66    aatatatatgcatgtacaa 84
             |||||||||||||||||||
Sbjct: 22153 aatatatatgcatgtacaa 22171
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>emb|AL445250.4| Human DNA sequence from clone RP11-199A24 on chromosome 6 Contains a
             CpG island, complete sequence
          Length = 178384

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 66    aatatatatgcatgtacaa 84
             |||||||||||||||||||
Sbjct: 45876 aatatatatgcatgtacaa 45858
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>emb|AL391137.11| Human DNA sequence from clone RP11-144G6 on chromosome 10 Contains a
            KIAA0187 pseudogene, the gene for a novel protein similar
            to ARF GTPase-activating protein (MRIP2), the ANXA8L1
            gene for annexin A8-like 1, a novel gene, the glutamate
            dehydrogenase pseudogene 8 (GLUDP8), a pseudogene similar
            to part of cathepsin L (CTSL), a novel gene, the gene for
            a novel protein, a dual specificity phosphatase 8 (DUSP8)
            pseudogene, the 5' end of a novel gene and two CpG
            islands, complete sequence
          Length = 178169

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 59   aattaagaatatatatgca 77
            |||||||||||||||||||
Sbjct: 3888 aattaagaatatatatgca 3906
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>emb|AL358972.13| Human DNA sequence from clone RP11-347L18 on chromosome 6 Contains a
              novel gene, complete sequence
          Length = 172606

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 47     gcaagttcagttaattaagaatatata 73
              ||||| |||||| ||||||||||||||
Sbjct: 101597 gcaagatcagttcattaagaatatata 101623
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>emb|AL354808.24| Human DNA sequence from clone RP11-523H24 on chromosome 13 Contains the
             3' end of a novel gene, the gene for paraspeckle protein 1
             (PSP1) (FLJ10955), two novel genes, a  sialyltransferase
             7D (SIAT7D) pseudogene, the 3' end of a variant of the
             ZNF237 gene for zinc finger protein 237 and two CpG
             islands, complete sequence
          Length = 169303

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    aagaatatatatgcatgta 81
             |||||||||||||||||||
Sbjct: 82071 aagaatatatatgcatgta 82053
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>emb|AL139327.18| Human DNA sequence from clone RP11-408E5 on chromosome 13q11-12.2
             Contains an FSH primary respone homolog 1 (FSHPRH1)
             pseudogene, a paraspeckle protein 1 alpha pseudogene,a
             novel gene, the TUBA2 gene for tubulin alpha 2, two novel
             pseudogenes and a gene for a novel protein similar to
             DMPK-like CDC42-binding protein kinase beta (CDC42BPB),
             complete sequence
          Length = 149559

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    aagaatatatatgcatgta 81
             |||||||||||||||||||
Sbjct: 96836 aagaatatatatgcatgta 96818
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>gb|AC133932.4| Oryza sativa chromosome 3 BAC OSJNBb0074M06 genomic sequence, complete
             sequence
          Length = 146775

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 60    attaagaatatatatgcat 78
             |||||||||||||||||||
Sbjct: 79566 attaagaatatatatgcat 79584
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>emb|Z97341.2|ATFCA6 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 6
          Length = 213788

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 56    gttaattaagaatatatat 74
             |||||||||||||||||||
Sbjct: 49574 gttaattaagaatatatat 49556
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>emb|AL161544.2|ATCHRIV44 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 44
          Length = 198735

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 56    gttaattaagaatatatat 74
             |||||||||||||||||||
Sbjct: 27502 gttaattaagaatatatat 27484
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>emb|AL714016.8| Mouse DNA sequence from clone RP23-229J16 on chromosome 11, complete
            sequence
          Length = 3994

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 63   aagaatatatatgcatgta 81
            |||||||||||||||||||
Sbjct: 3822 aagaatatatatgcatgta 3840
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>emb|AL669928.8| Mouse DNA sequence from clone RP23-76F22 on chromosome 11 Contains a
            pseudogene similar to part of a member of the tropomyosin
            gene family, complete sequence
          Length = 100326

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 63   aagaatatatatgcatgta 81
            |||||||||||||||||||
Sbjct: 1828 aagaatatatatgcatgta 1846
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>gb|AC112693.5| Homo sapiens chromosome 15, clone RP11-326A13, complete sequence
          Length = 136130

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 56     gttaattaagaatatatat 74
              |||||||||||||||||||
Sbjct: 105818 gttaattaagaatatatat 105800
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>emb|BX323861.10| Zebrafish DNA sequence from clone CH211-209F23 in linkage group 2,
              complete sequence
          Length = 173663

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 54     cagttaattaagaatatat 72
              |||||||||||||||||||
Sbjct: 154372 cagttaattaagaatatat 154390
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>gb|AF336378.1| Mus musculus Kel blood group protein (Kel), epithelial calcium channel 1
              (Ecac1), epithelial calcium channel 2 (Ecac2), and ephrin
              type A receptor (Mep) genes, complete cds; and T cell
              receptor beta chain (Tcr) gene, partial cds
          Length = 169781

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 66     aatatatatgcatgtacaa 84
              |||||||||||||||||||
Sbjct: 105209 aatatatatgcatgtacaa 105227
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>gb|AC092812.2| Homo sapiens chromosome 1 clone RP11-536F12, complete sequence
          Length = 160903

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 56   gttaattaagaatatatat 74
            |||||||||||||||||||
Sbjct: 8788 gttaattaagaatatatat 8770
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>emb|BX664714.16| Zebrafish DNA sequence from clone DKEY-204C3 in linkage group 7, complete
              sequence
          Length = 159633

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 47     gcaagttcagttaattaag 65
              |||||||||||||||||||
Sbjct: 144965 gcaagttcagttaattaag 144983
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>gb|AC006551.6|AC006551 Arabidopsis thaliana chromosome I BAC F12K8 genomic sequence, complete
             sequence
          Length = 107200

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 59    aattaagaatatatatgca 77
             |||||||||||||||||||
Sbjct: 89205 aattaagaatatatatgca 89187
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>gb|AC148663.1| Macaca mulatta Major Histocompatibility Complex BAC MMU012K22, complete
              sequence
          Length = 174897

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 40     aaaaggggcaagttcagttaattaaga 66
              ||||||||||||||  |||||||||||
Sbjct: 163453 aaaaggggcaagtttggttaattaaga 163479
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>gb|AC148661.1| Macaca mulatta Major Histocompatibility Complex BAC MMU007H18, complete
              sequence
          Length = 215614

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 40     aaaaggggcaagttcagttaattaaga 66
              ||||||||||||||  |||||||||||
Sbjct: 114801 aaaaggggcaagtttggttaattaaga 114827
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 60       attaagaatatatatgcat 78
                |||||||||||||||||||
Sbjct: 16381277 attaagaatatatatgcat 16381259
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>gb|AC008217.5|AC008217 Drosophila melanogaster, chromosome 3R, region 98B-98B, BAC clone
             BACR10J03, complete sequence
          Length = 193245

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 33    ccattacaaaaggggcaagttca 55
             ||||||||||||| |||||||||
Sbjct: 89430 ccattacaaaaggcgcaagttca 89452
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>gb|AC008253.8|AC008253 Drosophila melanogaster, chromosome 3R, region 98B1-98B2, BAC clone
             BACR48A16, complete sequence
          Length = 180887

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 33    ccattacaaaaggggcaagttca 55
             ||||||||||||| |||||||||
Sbjct: 58168 ccattacaaaaggcgcaagttca 58190
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>gb|AC007645.4|AC007645 Drosophila melanogaster, chromosome 3R, region 86C-86D, BAC clone
              BACR04L09, complete sequence
          Length = 165136

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 52     ttcagttaattaagaatatatat 74
              ||||||||||||| |||||||||
Sbjct: 102669 ttcagttaattaataatatatat 102691
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>gb|AC154845.2| Mus musculus BAC clone RP23-48E18 from chromosome 14, complete sequence
          Length = 211129

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 66    aatatatatgcatgtacaa 84
             |||||||||||||||||||
Sbjct: 49411 aatatatatgcatgtacaa 49429
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>gb|AC010148.13| Homo sapiens BAC clone RP11-367B19 from 2, complete sequence
          Length = 231562

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 66     aatatatatgcatgtacaa 84
              |||||||||||||||||||
Sbjct: 170268 aatatatatgcatgtacaa 170286
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>gb|AC023051.21|AC023051 Homo sapiens 12 BAC RP11-666F17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 185930

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 66     aatatatatgcatgtacaa 84
              |||||||||||||||||||
Sbjct: 140762 aatatatatgcatgtacaa 140744
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>gb|AC121540.14| Mus musculus chromosome 3, clone RP23-48L9, complete sequence
          Length = 224634

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 61     ttaagaatatatatgcatgtaca 83
              ||||||||||||||| |||||||
Sbjct: 222336 ttaagaatatatatgtatgtaca 222314
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>gb|AE003762.4| Drosophila melanogaster chromosome 3R, section 100 of 118 of the complete
              sequence
          Length = 231486

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 33     ccattacaaaaggggcaagttca 55
              ||||||||||||| |||||||||
Sbjct: 119108 ccattacaaaaggcgcaagttca 119130
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>gb|AE003689.2| Drosophila melanogaster chromosome 3R, section 27 of 118 of the complete
              sequence
          Length = 215899

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 52     ttcagttaattaagaatatatat 74
              ||||||||||||| |||||||||
Sbjct: 195163 ttcagttaattaataatatatat 195185
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>emb|AL929161.10| Zebrafish DNA sequence from clone CH211-93A19, complete sequence
          Length = 197027

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 47     gcaagttcagttaattaag 65
              |||||||||||||||||||
Sbjct: 165745 gcaagttcagttaattaag 165763
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>gb|AC155158.15| Mus musculus chromosome 3, clone RP24-70L3, complete sequence
          Length = 240767

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 61    ttaagaatatatatgcatgtaca 83
             ||||||||||||||| |||||||
Sbjct: 28350 ttaagaatatatatgtatgtaca 28328
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>emb|AL772138.15| Mouse DNA sequence from clone RP23-213F17 on chromosome 4, complete
              sequence
          Length = 229213

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 65     gaatatatatgcatgtaca 83
              |||||||||||||||||||
Sbjct: 220615 gaatatatatgcatgtaca 220597
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>gb|AC152951.2| Mus musculus 10 BAC RP23-451J19 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 183431

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 65     gaatatatatgcatgtaca 83
              |||||||||||||||||||
Sbjct: 163611 gaatatatatgcatgtaca 163629
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>emb|AL808120.9| Mouse DNA sequence from clone RP23-418E2 on chromosome X, complete
              sequence
          Length = 148328

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                        
Query: 64     agaatatatatgcatgtacaantaca 89
              ||||||||||||||| ||||| ||||
Sbjct: 144838 agaatatatatgcatatacaaataca 144813


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 908,325
Number of Sequences: 3902068
Number of extensions: 908325
Number of successful extensions: 77482
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77286
Number of HSP's gapped (non-prelim): 196
length of query: 118
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 97
effective length of database: 17,151,101,840
effective search space: 1663656878480
effective search space used: 1663656878480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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