Clone Information

BLAST Search Result

Clone Name	rbah63j23
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ZFNL3_ORYSA (Q5NAV3) Zinc finger CCCH type domain-containing pro...	130	5e-30
2	ZFNL1_ORYSA (Q5NAW2) Zinc finger CCCH type domain-containing pro...	128	2e-29
3	ZFNL2_ORYSA (Q5JLB5) Zinc finger CCCH type domain-containing pro...	121	2e-27
4	ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing pro...	117	4e-26
5	ZFN1_ARATH (Q8GXX7) Zinc finger CCCH type domain-containing prot...	116	6e-26
6	ZFNL4_ARATH (Q94AD9) Zinc finger CCCH type domain-containing pro...	114	3e-25
7	ZFNL2_ARATH (Q9SQU4) Zinc finger CCCH type domain-containing pro...	114	4e-25
8	ZFNL_PEA (Q9SWF9) Zinc finger CCCH type domain-containing protei...	113	5e-25
9	ZFN3_ARATH (Q8L7N8) Zinc finger CCCH type domain-containing prot...	113	6e-25
10	ZFNL3_ARATH (Q6NPN3) Zinc finger CCCH type domain-containing pro...	110	3e-24
11	ZFN2_ARATH (O48772) Zinc finger CCCH type domain-containing prot...	105	2e-22
12	ZFNL5_ARATH (Q5RJC5) Zinc finger CCCH type domain-containing pro...	98	2e-20
13	ZFNL6_ARATH (Q9STM4) Putative zinc finger CCCH type domain-conta...	96	1e-19
14	U2AF1_SCHPO (Q09176) Splicing factor U2AF 23 kDa subunit (U2 aux...	45	2e-04
15	CS007_HUMAN (Q9UPT8) Zinc finger CCCH-type domain-containing pro...	40	0.009
16	CS007_MOUSE (Q6ZPZ3) Zinc finger CCCH-type domain-containing pro...	40	0.009
17	TTP_RAT (P47973) Tristetraproline (TTP) (Zinc finger protein 36)...	39	0.012
18	TIS1_DROME (P47980) Protein TIS11 (dTIS11)	39	0.012
19	TTP_HUMAN (P26651) Tristetraproline (TTP) (Zinc finger protein 3...	39	0.015
20	TTP_BOVIN (P53781) Tristetraproline (TTP) (Zinc finger protein 3...	38	0.026
21	ZC3H3_HUMAN (Q8IXZ2) Zinc finger CCCH-type domain-containing pro...	37	0.057
22	U2AF1_HUMAN (Q01081) Splicing factor U2AF 35 kDa subunit (U2 aux...	37	0.057
23	U2AF1_MOUSE (Q9D883) Splicing factor U2AF 35 kDa subunit (U2 aux...	37	0.057
24	CTH1_YEAST (P47976) Zinc finger protein CTH1	37	0.075
25	TTP_MOUSE (P22893) Tristetraproline (TTP) (Zinc finger protein 3...	37	0.075
26	MKRN2_HUMAN (Q9H000) Makorin-2 (RING finger protein 62)	37	0.075
27	TTP_SHEEP (Q6S9E0) Tristetraproline (TTP) (Zinc finger protein 3...	36	0.098
28	U2AFL_MOUSE (Q64707) U2 small nuclear ribonucleoprotein auxiliar...	36	0.098
29	MKRN2_BRARE (Q9DFG8) Makorin-2	36	0.13
30	U2AFL_HUMAN (Q15695) U2 small nuclear ribonucleoprotein auxiliar...	36	0.13
31	U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliar...	36	0.13
32	U2AFM_MOUSE (Q62377) U2 small nuclear ribonucleoprotein auxiliar...	36	0.13
33	CWC24_NEUCR (Q7SDY3) Pre-mRNA-splicing factor cwc-24	36	0.13
34	NAB2_YEAST (P32505) Nuclear polyadenylated RNA-binding protein NAB2	35	0.17
35	RN113_CAEEL (O17917) Putative RING finger protein 113 homolog	35	0.17
36	YTH1_YEAST (Q06102) Protein YTH1	35	0.17
37	ZC3H8_HUMAN (Q8N5P1) Zinc finger CCCH-type domain-containing pro...	35	0.17
38	R113B_HUMAN (Q8IZP6) RING finger protein 113B (Zinc finger prote...	35	0.22
39	ZN183_BOVIN (Q67ER4) Zinc finger protein 183	35	0.22
40	R113A_HUMAN (O15541) RING finger protein 113A (Zinc finger prote...	35	0.22
41	TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) ...	35	0.22
42	TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein)	35	0.22
43	MKRN2_MOUSE (Q9ERV1) Makorin-2	35	0.28
44	CWC24_EMENI (Q5AVC5) Pre-mRNA-splicing factor cwc24	34	0.37
45	DHX57_MOUSE (Q6P5D3) Putative ATP-dependent RNA helicase DHX57 (...	34	0.37
46	ZFS1_SCHPO (P47979) Zinc-finger protein zfs1	34	0.37
47	CWC24_USTMA (Q4P400) Pre-mRNA-splicing factor CWC24	34	0.37
48	ZC3H3_MOUSE (Q8CHP0) Zinc finger CCCH-type domain-containing pro...	34	0.37
49	DHX57_HUMAN (Q6P158) Putative ATP-dependent RNA helicase DHX57 (...	34	0.37
50	K0853_HUMAN (Q5T200) Protein KIAA0853	34	0.48
51	MKRN2_SERQU (Q9DD48) Makorin-2 (Zinc finger protein YGHLC3HC4)	34	0.48
52	U2AF1_DROME (Q94535) Splicing factor U2af 38 kDa subunit (U2 aux...	33	0.63
53	TISB_RAT (P17431) Butyrate response factor 1 (TIS11B protein) (E...	33	0.63
54	TISB_MOUSE (P23950) Butyrate response factor 1 (TIS11B protein)	33	0.63
55	TISB_HUMAN (Q07352) Butyrate response factor 1 (TIS11B protein) ...	33	0.63
56	CWC24_CRYNE (Q5KB05) Pre-mRNA-splicing factor CWC24	33	0.63
57	CWC24_ASHGO (Q752S4) Pre-mRNA-splicing factor CWC24	33	0.83
58	MKRN1_MOUSE (Q9QXP6) Makorin-1	33	0.83
59	CWC24_YEAST (P53769) Pre-mRNA-splicing factor CWC24 (Complexed w...	33	0.83
60	PRR3_RAT (Q6MG07) Proline-rich protein 3 (MHC class I region pro...	33	1.1
61	CWC24_KLULA (Q6CSS6) Pre-mRNA-splicing factor CWC24	33	1.1
62	PRR3_PANTR (Q7YR36) Proline-rich protein 3 (MHC class I region p...	33	1.1
63	PRR3_HUMAN (P79522) Proline-rich protein 3 (MHC class I region p...	33	1.1
64	CWC24_ASPFU (Q4WUA0) Pre-mRNA-splicing factor cwc24	33	1.1
65	PRR3_MOUSE (Q811B5) Proline-rich protein 3 (MHC class I region p...	33	1.1
66	CWC24_YARLI (Q6CB23) Pre-mRNA-splicing factor CWC24	33	1.1
67	U2AF1_PIG (Q29350) Splicing factor U2AF 35 kDa subunit (U2 auxil...	33	1.1
68	ZC3H8_MOUSE (Q9JJ48) Zinc finger CCCH-type domain-containing pro...	32	1.4
69	CTH2_YEAST (P47977) Zinc finger protein CTH2 (YTIS11 protein)	32	1.4
70	MEX5_CAEEL (Q9XUB2) Zinc finger protein mex-5	32	1.4
71	CWC24_CANGA (Q6FXX1) Pre-mRNA-splicing factor CWC24	32	2.4
72	NUPL2_MOUSE (Q8CIC2) Nucleoporin-like 2 (NLP-1)	32	2.4
73	ZC3H6_MOUSE (Q8BYK8) Zinc finger CCCH-type domain-containing pro...	32	2.4
74	PRR3_PIG (Q767L1) Proline-rich protein 3 (MHC class I region pro...	32	2.4
75	CWC24_SCHPO (Q9P6R8) Pre-mRNA-splicing factor cwc24 (Complexed w...	31	3.1
76	YQC1_SCHPO (O74463) Hypothetical protein C1739.01 in chromosome III	31	3.1
77	ZC3H6_HUMAN (P61129) Zinc finger CCCH-type domain-containing pro...	31	3.1
78	NUPL2_HUMAN (O15504) Nucleoporin-like 2 (NLP-1) (hCG1) (NUP42 ho...	31	3.1
79	MES4_DROME (Q8MT36) Probable histone methyltransferase Mes-4 (Ma...	31	4.1
80	CWC24_DEBHA (Q6BYU0) Pre-mRNA-splicing factor CWC24	30	5.4
81	MKRN1_MACEU (Q9TT91) Makorin-1	30	7.0
82	MEX6_CAEEL (Q09436) Zinc finger protein mex-6	30	7.0
83	PIE1_CAEEL (Q94131) Pharynx and intestine in excess protein 1 (P...	30	7.0
84	CD59B_MOUSE (P58019) CD59B glycoprotein precursor (Membrane atta...	30	7.0

>ZFNL3_ORYSA (Q5NAV3) Zinc finger CCCH type domain-containing protein ZFN-like 3|
          Length = 466

 Score =  130 bits (326), Expect = 5e-30
 Identities = 65/154 (42%), Positives = 82/154 (53%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 518
           GE DC +Y++TG+C YG  CR+NHP     A+V     LN   K   S +          
Sbjct: 53  GEADCVYYLRTGACGYGENCRYNHPRDRAAAAV-----LNGGGKTTHSAE---------- 97

Query: 517 EPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGF 338
               YP+RPG+ VC++Y K G CKF   CK+ HP           RE S Q VML  +G+
Sbjct: 98  ----YPERPGQPVCEYYMKNGTCKFGSNCKYDHP-----------REGSVQAVMLNSSGY 142

Query: 337 PRREDAEACAYYMKTGACKFGVQCKFDHPPLGEV 236
           P R   + C YY+KTG CKFG  CKF HP +G V
Sbjct: 143 PLRSGEKDCTYYVKTGHCKFGSTCKFHHPEIGGV 176



 Score = 86.3 bits (212), Expect = 8e-17
 Identities = 39/85 (45%), Positives = 48/85 (56%)
 Frame = -1

Query: 505 YPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRRE 326
           +P RPG+  C +Y KTG CKF   CK+HHP   + P S           ML+  G P R 
Sbjct: 296 FPARPGQPECQYYLKTGSCKFGSACKYHHPQYLNTPKS---------NCMLSPLGLPLRP 346

Query: 325 DAEACAYYMKTGACKFGVQCKFDHP 251
            ++ CAYY + G CKFG  CKFDHP
Sbjct: 347 GSQPCAYYTQHGFCKFGPTCKFDHP 371



 Score = 83.6 bits (205), Expect = 5e-16
 Identities = 38/91 (41%), Positives = 50/91 (54%)
 Frame = -1

Query: 502 PQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRRED 323
           P+RPGE  C +Y +TG C + E C+++HP DR+A   +     +        A +P R  
Sbjct: 49  PERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVLNGGGKTTHS-----AEYPERPG 103

Query: 322 AEACAYYMKTGACKFGVQCKFDHPPLGEVIA 230
              C YYMK G CKFG  CK+DHP  G V A
Sbjct: 104 QPVCEYYMKNGTCKFGSNCKYDHPREGSVQA 134



 Score = 74.3 bits (181), Expect = 3e-13
 Identities = 38/121 (31%), Positives = 60/121 (49%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 518
           G+ +C +Y+KTGSC++G AC+++HP+  N           P +  + S            
Sbjct: 301 GQPECQYYLKTGSCKFGSACKYHHPQYLN----------TPKSNCMLS------------ 338

Query: 517 EPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGF 338
            P+  P RPG   C +Y + GFCKF   CKF HP+     G+++   S+     L +A +
Sbjct: 339 -PLGLPLRPGSQPCAYYTQHGFCKFGPTCKFDHPM-----GTLSYSPSASSITDLPIAPY 392

Query: 337 P 335
           P
Sbjct: 393 P 393

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>ZFNL1_ORYSA (Q5NAW2) Zinc finger CCCH type domain-containing protein ZFN-like 1|
          Length = 476

 Score =  128 bits (321), Expect = 2e-29
 Identities = 63/154 (40%), Positives = 83/154 (53%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 518
           GE DC +Y++TG+C +G  CR+NHP R    +   G   N AA                 
Sbjct: 61  GEEDCVYYLRTGACGFGDRCRYNHP-RDRGGTEFGGGARNAAA----------------- 102

Query: 517 EPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGF 338
             + YP+R G+ +C++Y KTG CKF   CK+HHP          K++ +  PVML  +GF
Sbjct: 103 --LDYPERAGQPICEYYMKTGTCKFGTNCKYHHP----------KQDGAVLPVMLNNSGF 150

Query: 337 PRREDAEACAYYMKTGACKFGVQCKFDHPPLGEV 236
           P R   + C+YYMKTG CKFG  CKF HP  G V
Sbjct: 151 PIRLGEKECSYYMKTGQCKFGTTCKFHHPEFGGV 184



 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 37/85 (43%), Positives = 50/85 (58%)
 Frame = -1

Query: 505 YPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRRE 326
           +P+RPG+  C +Y +TG CKF   CK+HHP + SAP S           M+     P R 
Sbjct: 304 FPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKS---------GYMVNSLCLPLRP 354

Query: 325 DAEACAYYMKTGACKFGVQCKFDHP 251
            A+ CAYY + G C++GV CK+DHP
Sbjct: 355 GAQPCAYYAQNGYCRYGVACKYDHP 379



 Score = 80.1 bits (196), Expect = 6e-15
 Identities = 38/101 (37%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
 Frame = -1

Query: 502 PQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAP--GSIAKRESSQQPVMLTVAGFPRR 329
           P+RPGE  C +Y +TG C F +RC+++HP DR     G  A+  ++          +P R
Sbjct: 57  PERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALD--------YPER 108

Query: 328 EDAEACAYYMKTGACKFGVQCKFDHPPLGEVIANVSKQGDG 206
                C YYMKTG CKFG  CK+ HP     +  V     G
Sbjct: 109 AGQPICEYYMKTGTCKFGTNCKYHHPKQDGAVLPVMLNNSG 149



 Score = 60.1 bits (144), Expect = 6e-09
 Identities = 24/95 (25%), Positives = 47/95 (49%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 518
           G+ DC +Y++TG C++G  C+++HP           ++  P + ++ +            
Sbjct: 309 GQPDCQYYMRTGDCKFGATCKYHHPR----------ELSAPKSGYMVN------------ 346

Query: 517 EPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPV 413
             +  P RPG   C +Y + G+C++   CK+ HP+
Sbjct: 347 -SLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHPM 380



 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 18/31 (58%), Positives = 20/31 (64%)
 Frame = -1

Query: 343 GFPRREDAEACAYYMKTGACKFGVQCKFDHP 251
           GFP R     C YYM+TG CKFG  CK+ HP
Sbjct: 303 GFPERPGQPDCQYYMRTGDCKFGATCKYHHP 333

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>ZFNL2_ORYSA (Q5JLB5) Zinc finger CCCH type domain-containing protein ZFN-like 2|
          Length = 439

 Score =  121 bits (303), Expect = 2e-27
 Identities = 63/157 (40%), Positives = 84/157 (53%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 518
           GE DC++Y++TG CR+G +CRFNHP+  N A                      A   ++ 
Sbjct: 82  GEPDCTYYLRTGLCRFGMSCRFNHPQDRNLA---------------------IASARMKG 120

Query: 517 EPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGF 338
           E   YP+R G+  C +Y KTG CKF   CKFHHP +++    IA R      V L   G+
Sbjct: 121 E---YPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAG---IAGR------VQLNTLGY 168

Query: 337 PRREDAEACAYYMKTGACKFGVQCKFDHPPLGEVIAN 227
           P R   + CAYY+KTG CK+G  CKF HP L   +A+
Sbjct: 169 PLRPSEKECAYYLKTGQCKYGNTCKFHHPELFNAMAS 205



 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 38/87 (43%), Positives = 47/87 (54%)
 Frame = -1

Query: 505 YPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRRE 326
           +P+RP +  C +Y KTG CKF   CKFHHP  RS P             +L+  G P R 
Sbjct: 329 FPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMP---------TPDCVLSPVGLPLRP 379

Query: 325 DAEACAYYMKTGACKFGVQCKFDHPPL 245
             E C +Y + G CKFG  CKFDHP +
Sbjct: 380 GEELCKFYSRYGICKFGANCKFDHPTM 406



 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 36/89 (40%), Positives = 49/89 (55%)
 Frame = -1

Query: 517 EPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGF 338
           +P  YP+R GE  C +Y +TG C+F   C+F+HP DR+   + A+ +            +
Sbjct: 73  QPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMKGE----------Y 122

Query: 337 PRREDAEACAYYMKTGACKFGVQCKFDHP 251
           P R     C YY+KTG CKFG  CKF HP
Sbjct: 123 PERMGQPECQYYLKTGTCKFGPTCKFHHP 151



 Score = 73.6 bits (179), Expect = 6e-13
 Identities = 56/188 (29%), Positives = 76/188 (40%), Gaps = 40/188 (21%)
 Frame = -1

Query: 694 EVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPA------------------- 572
           E +C++Y+KTG C+YG  C+F+HPE  N  +   G  + P+                   
Sbjct: 174 EKECAYYLKTGQCKYGNTCKFHHPELFNAMASSRGSPIYPSVHSSATAGPPYTGTMASWA 233

Query: 571 ---AKFLPSFDFRAAHVPIEPEPITYPQRPGETVC-DFYKKTGFCKFSERCKFHHP---- 416
                F+PS  ++    P    P+  PQ   +    + Y        S   +   P    
Sbjct: 234 FPRGSFIPSPRWQN---PSNYAPMIVPQGLVQVPSWNSYTGQMMPVSSSESRLQSPGAQQ 290

Query: 415 -------VDRSA--PGSIAKRESSQQPV----MLTVAGFPRREDAEACAYYMKTGACKFG 275
                  VD SA   G ++   SS  PV    +     FP R D   C YYMKTG CKFG
Sbjct: 291 TYGTSQQVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPECQYYMKTGDCKFG 350

Query: 274 VQCKFDHP 251
             CKF HP
Sbjct: 351 AVCKFHHP 358



 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 35/112 (31%), Positives = 51/112 (45%)
 Frame = -1

Query: 688 DCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPEPI 509
           +C +Y+KTG C++G  C+F+HP   +  +  P  +L+P                     +
Sbjct: 337 ECQYYMKTGDCKFGAVCKFHHPRVRSMPT--PDCVLSP---------------------V 373

Query: 508 TYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVML 353
             P RPGE +C FY + G CKF   CKF HP      G  A   +S    M+
Sbjct: 374 GLPLRPGEELCKFYSRYGICKFGANCKFDHPTMAPPMGVYAYGSASTNVPMV 425



 Score = 35.0 bits (79), Expect = 0.22
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHP 623
           GE  C FY + G C++G  C+F+HP
Sbjct: 380 GEELCKFYSRYGICKFGANCKFDHP 404

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>ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing protein ZFN-like 1|
          Length = 468

 Score =  117 bits (292), Expect = 4e-26
 Identities = 65/156 (41%), Positives = 82/156 (52%), Gaps = 1/156 (0%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 518
           G  DC++Y++TG C YG  CR+NHP   + ASV                  RA       
Sbjct: 47  GAPDCAYYMRTGVCGYGNRCRYNHPR--DRASV--------------EATVRATG----- 85

Query: 517 EPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGF 338
               YP+R GE  C FY KTG CKF   CKFHHP  ++A GS++        V L + G+
Sbjct: 86  ---QYPERFGEPPCQFYLKTGTCKFGASCKFHHP--KNAGGSMSH-------VPLNIYGY 133

Query: 337 PRREDAEACAYYMKTGACKFGVQCKFDHP-PLGEVI 233
           P RE    C+YY+KTG CKFG+ CKF HP P G  +
Sbjct: 134 PVREGDNECSYYLKTGQCKFGITCKFHHPQPAGTTV 169



 Score = 89.4 bits (220), Expect = 1e-17
 Identities = 42/95 (44%), Positives = 54/95 (56%)
 Frame = -1

Query: 505 YPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRRE 326
           +P+RPGE  C +Y KTG CKF   CKFHHP DR  P         +   +L+  G P R 
Sbjct: 286 FPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPP---------RANCVLSPIGLPLRP 336

Query: 325 DAEACAYYMKTGACKFGVQCKFDHPPLGEVIANVS 221
             + C +Y++ G CKFG  CKFDH P+G +  N S
Sbjct: 337 GVQRCTFYVQNGFCKFGSTCKFDH-PMGTIRYNPS 370



 Score = 73.6 bits (179), Expect = 6e-13
 Identities = 43/121 (35%), Positives = 57/121 (47%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 518
           GE +C +Y+KTG C++G +C+F+HP        VP     P A  + S            
Sbjct: 291 GEPECQYYLKTGDCKFGTSCKFHHPRDR-----VP-----PRANCVLS------------ 328

Query: 517 EPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGF 338
            PI  P RPG   C FY + GFCKF   CKF HP+     G+I    S+       VA +
Sbjct: 329 -PIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHPM-----GTIRYNPSASSLADAPVAPY 382

Query: 337 P 335
           P
Sbjct: 383 P 383



 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 48/189 (25%), Positives = 72/189 (38%), Gaps = 40/189 (21%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPERHNEA----------------SVVPGKILNPAAK 566
           G+ +CS+Y+KTG C++G  C+F+HP+                     S++P +   P++ 
Sbjct: 138 GDNECSYYLKTGQCKFGITCKFHHPQPAGTTVPPPPASAPQFYPSVQSLMPDQYGGPSSS 197

Query: 565 F------LPSFDFRAAHVPI--------------EPEPITYPQRPGET----VCDFYKKT 458
                  LP    + A+ P+                 P++    PG          Y  T
Sbjct: 198 LRVARTLLPGSYMQGAYGPMLLTPGVVPIPGWSPYSAPVSPALSPGAQHAVGATSLYGVT 257

Query: 457 GFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYMKTGACKF 278
                +      +P   S  G I K ++           FP R     C YY+KTG CKF
Sbjct: 258 QLTSTTPSLPGVYPSLSSPTGVIQKEQA-----------FPERPGEPECQYYLKTGDCKF 306

Query: 277 GVQCKFDHP 251
           G  CKF HP
Sbjct: 307 GTSCKFHHP 315

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>ZFN1_ARATH (Q8GXX7) Zinc finger CCCH type domain-containing protein ZFN1|
          Length = 397

 Score =  116 bits (291), Expect = 6e-26
 Identities = 60/149 (40%), Positives = 80/149 (53%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 518
           GE DCS+YI+TG CR+G  CRFNHP R  E  +   ++                      
Sbjct: 42  GEPDCSYYIRTGLCRFGSTCRFNHP-RDRELVIATARMRGE------------------- 81

Query: 517 EPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGF 338
               YP+R G+  C++Y KTG CKF   CKFHHP +++    IA R      V L + G+
Sbjct: 82  ----YPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKA---GIAGR------VSLNMLGY 128

Query: 337 PRREDAEACAYYMKTGACKFGVQCKFDHP 251
           P R +   CAY+++TG CKFG  CKF+HP
Sbjct: 129 PLRSNEVDCAYFLRTGHCKFGGTCKFNHP 157



 Score = 90.5 bits (223), Expect = 4e-18
 Identities = 41/90 (45%), Positives = 48/90 (53%)
 Frame = -1

Query: 520 PEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAG 341
           P    +P+RPG+  C FY KTG CKF   CKFHHP DR AP             +L+  G
Sbjct: 266 PRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAP---------PPDCLLSSIG 316

Query: 340 FPRREDAEACAYYMKTGACKFGVQCKFDHP 251
            P R     C +Y + G CKFG  CKFDHP
Sbjct: 317 LPLRPGEPLCVFYTRYGICKFGPSCKFDHP 346



 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 37/86 (43%), Positives = 48/86 (55%)
 Frame = -1

Query: 508 TYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRR 329
           +YP+RPGE  C +Y +TG C+F   C+F+HP DR    + A+              +P R
Sbjct: 36  SYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRGE----------YPER 85

Query: 328 EDAEACAYYMKTGACKFGVQCKFDHP 251
                C YY+KTG CKFGV CKF HP
Sbjct: 86  IGQPECEYYLKTGTCKFGVTCKFHHP 111



 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 33/95 (34%), Positives = 47/95 (49%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 518
           G+ +C FY+KTG C++G  C+F+HP   +  +  P  +L+                    
Sbjct: 276 GQPECQFYMKTGDCKFGTVCKFHHPR--DRQAPPPDCLLSS------------------- 314

Query: 517 EPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPV 413
             I  P RPGE +C FY + G CKF   CKF HP+
Sbjct: 315 --IGLPLRPGEPLCVFYTRYGICKFGPSCKFDHPM 347



 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 19/167 (11%)
 Frame = -1

Query: 694 EVDCSFYIKTGSCRYGRACRFNHPERHNEASVVP--GKILNP--AAKFLPS------FDF 545
           EVDC+++++TG C++G  C+FNHP+      +VP  G+   P   A F+ S        +
Sbjct: 134 EVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQSYPWSRASFIASPRWQDPSSY 193

Query: 544 RAAHVPIEPEPIT-YPQRPGETVCDFYKKTGFCKFSERCKFHHPVD--RSAPGSIAKRES 374
            +  +P    P+  +    G+        TG  +     + +  ++    + GS +    
Sbjct: 194 ASLIMPQGVVPVQGWNPYSGQLGSVSPSGTGNDQNYRNLQQNETIESGSQSQGSFSGYNP 253

Query: 373 SQQPVMLTVAGFPR------REDAEACAYYMKTGACKFGVQCKFDHP 251
                +      PR      R     C +YMKTG CKFG  CKF HP
Sbjct: 254 GSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHP 300



 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
 Frame = -1

Query: 355 LTVAGFPRREDAEACAYYMKTGACKFGVQCKFDHPPLGE-VIANVSKQGDGKKVVG 191
           +    +P R     C+YY++TG C+FG  C+F+HP   E VIA    +G+  + +G
Sbjct: 32  METGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRGEYPERIG 87



 Score = 36.6 bits (83), Expect = 0.075
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPER 617
           GE  C FY + G C++G +C+F+HP R
Sbjct: 322 GEPLCVFYTRYGICKFGPSCKFDHPMR 348

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>ZFNL4_ARATH (Q94AD9) Zinc finger CCCH type domain-containing protein ZFN-like 4|
          Length = 404

 Score =  114 bits (285), Expect = 3e-25
 Identities = 57/154 (37%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 518
           GE DC FY++TG C YG +CR+NHP                             H+P   
Sbjct: 49  GERDCQFYLRTGLCGYGSSCRYNHP----------------------------THLP--- 77

Query: 517 EPITY-----PQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVML 353
           + + Y     P+R G+  C+++ KTG CK+   CK+HHP DR+            QPVM 
Sbjct: 78  QDVAYYKEELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGA----------QPVMF 127

Query: 352 TVAGFPRREDAEACAYYMKTGACKFGVQCKFDHP 251
            V G P R   + C YY++TG C+FGV CKF HP
Sbjct: 128 NVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHP 161



 Score = 80.5 bits (197), Expect = 5e-15
 Identities = 57/208 (27%), Positives = 75/208 (36%), Gaps = 57/208 (27%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKF--------------L 560
           GE  C +Y++TG+CR+G AC+F+HP+  N  S   G    PAA                L
Sbjct: 137 GEKPCPYYLRTGTCRFGVACKFHHPQPDNGHSTAYGMSSFPAADLRYASGLTMMSTYGTL 196

Query: 559 PSFDFRAAHVPIEPEPI-----------------------TYPQRPGETV---------- 479
           P      ++VPI   P                          P   G +           
Sbjct: 197 PRPQVPQSYVPILVSPSQGFLPPQGWAPYMAASNSMYNVKNQPYYSGSSASMAMAVALNR 256

Query: 478 ----------CDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRR 329
                     C F+  TG CK+ + CK+ HP           R S   P ++     P R
Sbjct: 257 GLSESSDQPECRFFMNTGTCKYGDDCKYSHP---------GVRISQPPPSLINPFVLPAR 307

Query: 328 EDAEACAYYMKTGACKFGVQCKFDHPPL 245
               AC  +   G CKFG  CKFDHP L
Sbjct: 308 PGQPACGNFRSYGFCKFGPNCKFDHPML 335

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>ZFNL2_ARATH (Q9SQU4) Zinc finger CCCH type domain-containing protein ZFN-like 2|
          Length = 437

 Score =  114 bits (284), Expect = 4e-25
 Identities = 55/148 (37%), Positives = 76/148 (51%)
 Frame = -1

Query: 694 EVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPE 515
           E DC +Y++TG C YG  CRFNHP   +  +V+ G                     +  E
Sbjct: 32  EPDCIYYLRTGVCGYGSRCRFNHPR--DRGAVIGG---------------------VRGE 68

Query: 514 PITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFP 335
               P+R G  VC  + +TG CKF   CK+HHP      GS+A       PV L+  G+P
Sbjct: 69  AGALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVA-------PVSLSYLGYP 121

Query: 334 RREDAEACAYYMKTGACKFGVQCKFDHP 251
            R   + C+YY++TG CKFG+ C+F+HP
Sbjct: 122 LRPGEKECSYYLRTGQCKFGLTCRFNHP 149



 Score = 77.0 bits (188), Expect = 5e-14
 Identities = 32/84 (38%), Positives = 46/84 (54%)
 Frame = -1

Query: 505 YPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRRE 326
           +PQRP +  C ++ +TG CKF   C++HHPVD   P         +  ++L+  G P R 
Sbjct: 279 FPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPP---------KTGIVLSSIGLPLRP 329

Query: 325 DAEACAYYMKTGACKFGVQCKFDH 254
               C ++ + G CKFG  CKFDH
Sbjct: 330 GVAQCTHFAQHGICKFGPACKFDH 353



 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 518
           G   C  +++TG+C++G +C+++HP +      V                      P+  
Sbjct: 77  GHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSV---------------------APVSL 115

Query: 517 EPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQ---QPVMLTV 347
             + YP RPGE  C +Y +TG CKF   C+F+HPV  +  G   + +  Q   QP + T+
Sbjct: 116 SYLGYPLRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQLQTI 175



 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 31/110 (28%), Positives = 46/110 (41%)
 Frame = -1

Query: 688 DCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPEPI 509
           +C ++++TG C++G +CR++HP        VP K                    I    I
Sbjct: 287 ECQYFMRTGDCKFGSSCRYHHP-----VDAVPPK------------------TGIVLSSI 323

Query: 508 TYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPV 359
             P RPG   C  + + G CKF   CKF H +  S   S +    +  PV
Sbjct: 324 GLPLRPGVAQCTHFAQHGICKFGPACKFDHSMSSSLSYSPSASSLTDMPV 373



 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = -1

Query: 340 FPRREDAEACAYYMKTGACKFGVQCKFDHP 251
           FP+R D   C Y+M+TG CKFG  C++ HP
Sbjct: 279 FPQRPDQPECQYFMRTGDCKFGSSCRYHHP 308



 Score = 30.4 bits (67), Expect = 5.4
 Identities = 17/63 (26%), Positives = 29/63 (46%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 518
           G   C+ + + G C++G AC+F+H       S+      +P+A  L         +P+ P
Sbjct: 330 GVAQCTHFAQHGICKFGPACKFDH-------SMSSSLSYSPSASSL-------TDMPVAP 375

Query: 517 EPI 509
            PI
Sbjct: 376 YPI 378

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>ZFNL_PEA (Q9SWF9) Zinc finger CCCH type domain-containing protein ZFN-like|
          Length = 417

 Score =  113 bits (283), Expect = 5e-25
 Identities = 59/158 (37%), Positives = 82/158 (51%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 518
           GE DCS+YI+TG CR+G  CRFNHP                     P+     A   ++ 
Sbjct: 32  GEPDCSYYIRTGLCRFGATCRFNHP---------------------PNRKLAIATARMKG 70

Query: 517 EPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGF 338
           E   +P+R G+  C +Y KTG CKF   C+FHHP D++    +A R      V L + G+
Sbjct: 71  E---FPERLGQPECQYYLKTGTCKFGATCRFHHPKDKA---GVAGR------VALNILGY 118

Query: 337 PRREDAEACAYYMKTGACKFGVQCKFDHPPLGEVIANV 224
           P R +    AYY++TG CKFG  CKF HP    ++ ++
Sbjct: 119 PLRPNESERAYYLRTGQCKFGNTCKFHHPQPSNMVLSM 156



 Score = 83.2 bits (204), Expect = 7e-16
 Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
 Frame = -1

Query: 505 YPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRRE 326
           +P+RP +  C FY KTG CKF   C+FHHP +R  P             +L+  G P R 
Sbjct: 275 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERQIPA---------PDCVLSPIGLPLRP 325

Query: 325 DAEACAYYMKTGACKFGVQCKFDHPPLGEVIANVSK---QGDGKKVVGLS 185
               C +Y + G CKFG  CKFDH P+G    NV+       G++++G S
Sbjct: 326 GEPLCVFYSRYGICKFGPSCKFDH-PMGIFTYNVASPLADTPGRRLLGSS 374



 Score = 80.5 bits (197), Expect = 5e-15
 Identities = 34/85 (40%), Positives = 46/85 (54%)
 Frame = -1

Query: 505 YPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRRE 326
           YP+ PGE  C +Y +TG C+F   C+F+HP +R    + A+ +            FP R 
Sbjct: 27  YPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIATARMKGE----------FPERL 76

Query: 325 DAEACAYYMKTGACKFGVQCKFDHP 251
               C YY+KTG CKFG  C+F HP
Sbjct: 77  GQPECQYYLKTGTCKFGATCRFHHP 101



 Score = 71.2 bits (173), Expect = 3e-12
 Identities = 34/92 (36%), Positives = 45/92 (48%)
 Frame = -1

Query: 688 DCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPEPI 509
           +C FY+KTG C++G  CRF+HP      +  P  +L+P                     I
Sbjct: 283 ECQFYMKTGDCKFGAVCRFHHPRERQIPA--PDCVLSP---------------------I 319

Query: 508 TYPQRPGETVCDFYKKTGFCKFSERCKFHHPV 413
             P RPGE +C FY + G CKF   CKF HP+
Sbjct: 320 GLPLRPGEPLCVFYSRYGICKFGPSCKFDHPM 351



 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 46/186 (24%), Positives = 74/186 (39%), Gaps = 38/186 (20%)
 Frame = -1

Query: 694 EVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNP-------------------- 575
           E + ++Y++TG C++G  C+F+HP+  N    + G  + P                    
Sbjct: 124 ESERAYYLRTGQCKFGNTCKFHHPQPSNMVLSMRGSTVYPTVQSPTTPGQQSYAAGITNW 183

Query: 574 -AAKFLPSFDFRAAHVPIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRS-- 404
            ++ ++PS  ++    P    P+  PQ  G      +   G    SE  +     D++  
Sbjct: 184 SSSSYVPSPRWQG---PSSYAPLILPQ--GVVSVPGWSTYGGQMGSESPQQTMRNDQTYG 238

Query: 403 -----------APGSIAKRESSQQPVMLTVAG----FPRREDAEACAYYMKTGACKFGVQ 269
                        G+ ++  S   PV          FP R D   C +YMKTG CKFG  
Sbjct: 239 TSHQGELENAGLQGAYSQYRSGSVPVGFYALQRDNIFPERPDQPECQFYMKTGDCKFGAV 298

Query: 268 CKFDHP 251
           C+F HP
Sbjct: 299 CRFHHP 304



 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
 Frame = -1

Query: 340 FPRREDAEACAYYMKTGACKFGVQCKFDHPPLGEV-IANVSKQGDGKKVVG 191
           +P       C+YY++TG C+FG  C+F+HPP  ++ IA    +G+  + +G
Sbjct: 27  YPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIATARMKGEFPERLG 77



 Score = 35.0 bits (79), Expect = 0.22
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHP 623
           GE  C FY + G C++G +C+F+HP
Sbjct: 326 GEPLCVFYSRYGICKFGPSCKFDHP 350

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>ZFN3_ARATH (Q8L7N8) Zinc finger CCCH type domain-containing protein ZFN3|
          Length = 375

 Score =  113 bits (282), Expect = 6e-25
 Identities = 61/163 (37%), Positives = 86/163 (52%), Gaps = 1/163 (0%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 518
           GE DC++YI+TG CR+G  CRFNHP  H+   V+                   A   I+ 
Sbjct: 44  GEPDCAYYIRTGLCRFGSTCRFNHP--HDRKLVI-------------------ATARIKG 82

Query: 517 EPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSA-PGSIAKRESSQQPVMLTVAG 341
           E   YP+R G+  C+FY KTG CKF   CKFHHP +++   GS++          + V  
Sbjct: 83  E---YPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVS----------VNVLS 129

Query: 340 FPRREDAEACAYYMKTGACKFGVQCKFDHPPLGEVIANVSKQG 212
           +P R + + C+Y+++ G CKFG  CKF+HP        VS +G
Sbjct: 130 YPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRG 172



 Score =  104 bits (259), Expect = 3e-22
 Identities = 60/189 (31%), Positives = 84/189 (44%), Gaps = 41/189 (21%)
 Frame = -1

Query: 694 EVDCSFYIKTGSCRYGRACRFNHPERHNEASVV--------------------------- 596
           E DCS++++ G C++G  C+FNHP+  +   +V                           
Sbjct: 136 EDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTGQPSYSWSRTSF 195

Query: 595 ---PGKILNPAAKF------LPSFDFRAAH-VPIE----PEPITYPQRPGETVCDFYKKT 458
              P ++ +P+         L S  F + + VP+     P    +P+RPG+  C FY KT
Sbjct: 196 VANPPRLQDPSGFASGSQGGLFSSGFHSGNSVPLGFYALPRENVFPERPGQPECQFYMKT 255

Query: 457 GFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYMKTGACKF 278
           G CKF   CKFHHP DR  P             +L+  G P R     C +Y + G CKF
Sbjct: 256 GDCKFGTVCKFHHPRDRQTP---------PPDCVLSSVGLPLRPGEPLCVFYSRYGICKF 306

Query: 277 GVQCKFDHP 251
           G  CKFDHP
Sbjct: 307 GPSCKFDHP 315



 Score = 79.3 bits (194), Expect = 1e-14
 Identities = 35/86 (40%), Positives = 48/86 (55%)
 Frame = -1

Query: 508 TYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRR 329
           +YP+R GE  C +Y +TG C+F   C+F+HP DR    + A+ +            +P R
Sbjct: 38  SYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKGE----------YPER 87

Query: 328 EDAEACAYYMKTGACKFGVQCKFDHP 251
                C +Y+KTG CKFGV CKF HP
Sbjct: 88  IGQPECEFYLKTGTCKFGVTCKFHHP 113



 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 32/95 (33%), Positives = 47/95 (49%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 518
           G+ +C FY+KTG C++G  C+F+HP   +  +  P  +L+                    
Sbjct: 245 GQPECQFYMKTGDCKFGTVCKFHHPR--DRQTPPPDCVLSS------------------- 283

Query: 517 EPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPV 413
             +  P RPGE +C FY + G CKF   CKF HP+
Sbjct: 284 --VGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPM 316



 Score = 40.0 bits (92), Expect = 0.007
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPER-----HNEASVVPGKILNPAAKFLPSFDFRAAH 533
           GE  C FY + G C++G +C+F+HP R     +N AS  P   L+               
Sbjct: 291 GEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSPSSSLHQETAITTELRNLLVS 350

Query: 532 VPIEPEPITYPQ 497
             +E +P + P+
Sbjct: 351 SSVEAKPTSLPE 362

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>ZFNL3_ARATH (Q6NPN3) Zinc finger CCCH type domain-containing protein ZFN-like 3|
          Length = 465

 Score =  110 bits (276), Expect = 3e-24
 Identities = 55/148 (37%), Positives = 73/148 (49%)
 Frame = -1

Query: 694 EVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPE 515
           E DC +Y++TG C YG  CRFNHP   N A V+ G                     +  E
Sbjct: 54  EPDCIYYLRTGVCGYGSRCRFNHPR--NRAPVLGG---------------------LRTE 90

Query: 514 PITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFP 335
              +P+R G+ VC  + +TG CKF   CK+HHP       S+        PV L   GFP
Sbjct: 91  AGEFPERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVT-------PVSLNYMGFP 143

Query: 334 RREDAEACAYYMKTGACKFGVQCKFDHP 251
            R   + C+Y+M+TG CKFG  C++ HP
Sbjct: 144 LRPGEKECSYFMRTGQCKFGSTCRYHHP 171



 Score = 80.1 bits (196), Expect = 6e-15
 Identities = 35/110 (31%), Positives = 57/110 (51%)
 Frame = -1

Query: 583 LNPAAKFLPSFDFRAAHVPIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRS 404
           + P +   P++    +   +  +  T+PQRP +  C ++ +TG CKF   C+FHHP++ +
Sbjct: 271 ITPLSPSAPAYQSGPSSTGVSNKEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHHPMEAA 330

Query: 403 APGSIAKRESSQQPVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDH 254
           +P          +   L+  G P R  A  C ++ + G CKFG  CKFDH
Sbjct: 331 SP----------EASTLSHIGLPLRPGAVPCTHFAQHGICKFGPACKFDH 370



 Score = 77.4 bits (189), Expect = 4e-14
 Identities = 38/110 (34%), Positives = 56/110 (50%)
 Frame = -1

Query: 508 TYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRR 329
           T+P+RP E  C +Y +TG C +  RC+F+HP +R+      + E+ +         FP R
Sbjct: 47  TFPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRAPVLGGLRTEAGE---------FPER 97

Query: 328 EDAEACAYYMKTGACKFGVQCKFDHPPLGEVIANVSKQGDGKKVVGLSYV 179
                C ++M+TG CKFG  CK+ HP  G         GD    V L+Y+
Sbjct: 98  MGQPVCQHFMRTGTCKFGASCKYHHPRQG-------GGGDSVTPVSLNYM 140



 Score = 69.7 bits (169), Expect = 8e-12
 Identities = 33/121 (27%), Positives = 56/121 (46%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 518
           G+  C  +++TG+C++G +C+++HP +      V                      P+  
Sbjct: 99  GQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSV---------------------TPVSL 137

Query: 517 EPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGF 338
             + +P RPGE  C ++ +TG CKF   C++HHPV    PG  A  +  QQ +      +
Sbjct: 138 NYMGFPLRPGEKECSYFMRTGQCKFGSTCRYHHPV---PPGVQAPSQQQQQQLSAGPTMY 194

Query: 337 P 335
           P
Sbjct: 195 P 195



 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 36/185 (19%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHP----------ERHNEASVVPGKILNPAAKFLPSFD 548
           GE +CS++++TG C++G  CR++HP          ++  + S  P    +  ++ +PS  
Sbjct: 147 GEKECSYFMRTGQCKFGSTCRYHHPVPPGVQAPSQQQQQQLSAGPTMYPSLQSQTVPSSQ 206

Query: 547 FRAAHVPIEPE--PITYPQRP---GETVCDFYKKTGFCKFSERCKFHHPVDRS-APGSIA 386
            +   V   P+  P +Y Q P   G+ V       G   +S    +   V    +PG+  
Sbjct: 207 -QYGVVLARPQLLPGSYVQSPYGYGQMVLP----PGMVPYSGWNPYQASVSAMPSPGTQP 261

Query: 385 KRESSQQ----------------PVMLTVAG----FPRREDAEACAYYMKTGACKFGVQC 266
              +S                  P    V+     FP+R +   C Y+M+TG CKFG  C
Sbjct: 262 SMGTSSVYGITPLSPSAPAYQSGPSSTGVSNKEQTFPQRPEQPECQYFMRTGDCKFGTSC 321

Query: 265 KFDHP 251
           +F HP
Sbjct: 322 RFHHP 326



 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 33/118 (27%), Positives = 54/118 (45%)
 Frame = -1

Query: 688 DCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPEPI 509
           +C ++++TG C++G +CRF+HP           +  +P A  L       +H+ +     
Sbjct: 305 ECQYFMRTGDCKFGTSCRFHHPM----------EAASPEASTL-------SHIGL----- 342

Query: 508 TYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFP 335
             P RPG   C  + + G CKF   CKF H +  S   S++   S      + VA +P
Sbjct: 343 --PLRPGAVPCTHFAQHGICKFGPACKFDHSLGSS---SLSYSPSPSSLTDMPVAPYP 395



 Score = 32.0 bits (71), Expect = 1.8
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVP 593
           G V C+ + + G C++G AC+F+H    +  S  P
Sbjct: 347 GAVPCTHFAQHGICKFGPACKFDHSLGSSSLSYSP 381

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>ZFN2_ARATH (O48772) Zinc finger CCCH type domain-containing protein ZFN2|
          Length = 453

 Score =  105 bits (261), Expect = 2e-22
 Identities = 55/154 (35%), Positives = 73/154 (47%), Gaps = 5/154 (3%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 518
           GE DC F+++TG C YG +CR+NHP  +                               P
Sbjct: 46  GERDCQFFLRTGQCGYGNSCRYNHPLTNL------------------------------P 75

Query: 517 EPITY-----PQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVML 353
           + I Y     P+R G+  C+    TG CK+   CK+HHP DR+  G          PV+ 
Sbjct: 76  QGIIYYRDQLPERVGQPDCE----TGACKYGPTCKYHHPKDRNGAG----------PVLF 121

Query: 352 TVAGFPRREDAEACAYYMKTGACKFGVQCKFDHP 251
            V G P R+  + C YYM+TG C+FGV CKF HP
Sbjct: 122 NVLGLPMRQGEKPCPYYMQTGLCRFGVACKFHHP 155



 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 31/90 (34%), Positives = 43/90 (47%)
 Frame = -1

Query: 688 DCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPEPI 509
           +C F++ TG+C+YG  C+++HP+     S  P  +LNP                     I
Sbjct: 266 ECRFFMNTGTCKYGDDCKYSHPKERLLQS--PPTLLNP---------------------I 302

Query: 508 TYPQRPGETVCDFYKKTGFCKFSERCKFHH 419
             P RPG+  C  +K  GFCKF   CKF H
Sbjct: 303 VLPARPGQPACGNFKAYGFCKFGANCKFDH 332



 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 28/78 (35%), Positives = 35/78 (44%)
 Frame = -1

Query: 478 CDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYM 299
           C F+  TG CK+ + CK+ HP +R              P +L     P R    AC  + 
Sbjct: 267 CRFFMNTGTCKYGDDCKYSHPKERLL---------QSPPTLLNPIVLPARPGQPACGNFK 317

Query: 298 KTGACKFGVQCKFDHPPL 245
             G CKFG  CKFDH  L
Sbjct: 318 AYGFCKFGANCKFDHSML 335

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>ZFNL5_ARATH (Q5RJC5) Zinc finger CCCH type domain-containing protein ZFN-like 5|
          Length = 435

 Score = 98.2 bits (243), Expect = 2e-20
 Identities = 49/146 (33%), Positives = 70/146 (47%)
 Frame = -1

Query: 688 DCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPEPI 509
           DCSFY++TGSC+YG +C+FNHP R                            V    E +
Sbjct: 106 DCSFYMRTGSCKYGSSCKFNHPVRR-------------------KLQIGRERVRERDEDV 146

Query: 508 TYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRR 329
              + P    C +Y +TG CK+ E C+F H  + ++P S+ +         L   G P R
Sbjct: 147 ---ENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPE---------LNFLGLPIR 194

Query: 328 EDAEACAYYMKTGACKFGVQCKFDHP 251
              + C +YM+ G+CKFG  CKF+HP
Sbjct: 195 PGEKECPFYMRNGSCKFGSDCKFNHP 220



 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
 Frame = -1

Query: 505 YPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRRE 326
           +P+RP +  C +Y KTG CKF  +CK+HHP +R            Q        G P R 
Sbjct: 331 FPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRL---------PKQAAFSFNDKGLPLRP 381

Query: 325 DAEACAYYMKTGACKFGVQCKFDH--PP 248
           D   C +Y + G CKFG  C+FDH  PP
Sbjct: 382 DQSMCTHYSRYGICKFGPACRFDHSIPP 409



 Score = 71.2 bits (173), Expect = 3e-12
 Identities = 49/165 (29%), Positives = 68/165 (41%), Gaps = 16/165 (9%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPERHNEASV-VPGKILNPAAKFLPSFDFRAAHVPIE 521
           GE +C FY++ GSC++G  C+FNHP+      V  P    N    F P    +A+     
Sbjct: 196 GEKECPFYMRNGSCKFGSDCKFNHPDPTAIGGVDSPLYRGNNGGSFSPKAPSQASSTSWS 255

Query: 520 PE------------PITYPQRPGET--VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAK 383
                         P  +P   G T    D+        +        P       S+A+
Sbjct: 256 STRHMNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERSPLAPSSYQVNNSLAE 315

Query: 382 RES-SQQPVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDHP 251
             S SQ    ++V  FP R D   C YY+KTG CKF  +CK+ HP
Sbjct: 316 TSSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHHP 360



 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 35/91 (38%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
 Frame = -1

Query: 511 ITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPR 332
           + YP RP    C FY +TG CK+   CKF+HPV R       K +  ++ V        R
Sbjct: 96  MVYPVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRR-------KLQIGRERVR------ER 142

Query: 331 REDAE-----ACAYYMKTGACKFGVQCKFDH 254
            ED E      C YY +TG CK+G  C+F H
Sbjct: 143 DEDVENPKLMECKYYFRTGGCKYGESCRFSH 173



 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
 Frame = -1

Query: 688 DCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPEPI 509
           +C++Y+KTG C++   C+++HP+          ++   AA     F F    +P+     
Sbjct: 339 ECTYYLKTGDCKFKYKCKYHHPKN---------RLPKQAA-----FSFNDKGLPL----- 379

Query: 508 TYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRS-APGSIAKRESSQ 368
               RP +++C  Y + G CKF   C+F H +  + +P S    E+ Q
Sbjct: 380 ----RPDQSMCTHYSRYGICKFGPACRFDHSIPPTFSPSSSQTVEARQ 423



 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 20/45 (44%), Positives = 33/45 (73%)
 Frame = -1

Query: 385 KRESSQQPVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDHP 251
           + E S++ +M+    +P R D+E C++YM+TG+CK+G  CKF+HP
Sbjct: 86  EEEGSEKRMMMV---YPVRPDSEDCSFYMRTGSCKYGSSCKFNHP 127

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>ZFNL6_ARATH (Q9STM4) Putative zinc finger CCCH type domain-containing protein|
           ZFN-like 6
          Length = 448

 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 50/149 (33%), Positives = 73/149 (48%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 518
           G  DCSFY++TGSC++G +C+FNHP                A KF  + D +      + 
Sbjct: 112 GAEDCSFYMRTGSCKFGSSCKFNHPL---------------ARKFQIARDNKVREKEDDG 156

Query: 517 EPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGF 338
             +      G   C +Y +TG CK+ E C+F+H + +S   S  +         L   G 
Sbjct: 157 GKL------GLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAPE---------LNFLGL 201

Query: 337 PRREDAEACAYYMKTGACKFGVQCKFDHP 251
           P R     C YYM+ G+CK+G +CKF+HP
Sbjct: 202 PLRPGEVECPYYMRNGSCKYGAECKFNHP 230



 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 35/84 (41%), Positives = 43/84 (51%)
 Frame = -1

Query: 505 YPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRRE 326
           +P+RP +  C +Y KTG CKF   CK+HHP +R              P  L   G P R 
Sbjct: 343 FPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRL---------PKLPPYALNDKGLPLRP 393

Query: 325 DAEACAYYMKTGACKFGVQCKFDH 254
           D   C YY + G CKFG  C+FDH
Sbjct: 394 DQNICTYYSRYGICKFGPACRFDH 417



 Score = 70.5 bits (171), Expect = 5e-12
 Identities = 51/169 (30%), Positives = 71/169 (42%), Gaps = 20/169 (11%)
 Frame = -1

Query: 697 GEVDCSFYIKTGSCRYGRACRFNHPERHN----EASVVPGKILNPAAKFLPSFDFRAAHV 530
           GEV+C +Y++ GSC+YG  C+FNHP+       ++    G        F P   F+A+  
Sbjct: 206 GEVECPYYMRNGSCKYGAECKFNHPDPTTIGGTDSPSFRGNNGVSIGTFSPKATFQASST 265

Query: 529 PIEPE----------PITYPQRPGETV----CDFYKKTGFCKFSERCKFHHPVDRSAPGS 392
                          P+   Q  G T      + Y+ + +   SER  F          S
Sbjct: 266 SWSSPRHVNGTSPFIPVMLSQTHGVTSQNPEWNGYQASVYS--SERGVFSPSTTYLMNNS 323

Query: 391 IAKRES--SQQPVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDHP 251
            A+     SQ    +    FP R D   C+YYMKTG CKF   CK+ HP
Sbjct: 324 SAETSMLLSQYRHQMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHHP 372



 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 31/116 (26%), Positives = 51/116 (43%)
 Frame = -1

Query: 688 DCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPEPI 509
           +CS+Y+KTG C++   C+++HP+  N    +P   LN                       
Sbjct: 351 ECSYYMKTGDCKFKFNCKYHHPK--NRLPKLPPYALNDKG-------------------- 388

Query: 508 TYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAG 341
             P RP + +C +Y + G CKF   C+F H V    P S    ++  +P  ++  G
Sbjct: 389 -LPLRPDQNICTYYSRYGICKFGPACRFDHSV--QPPYSTESSQAIVEPPQVSANG 441



 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 18/30 (60%), Positives = 24/30 (80%)
 Frame = -1

Query: 340 FPRREDAEACAYYMKTGACKFGVQCKFDHP 251
           +P R  AE C++YM+TG+CKFG  CKF+HP
Sbjct: 107 YPVRPGAEDCSFYMRTGSCKFGSSCKFNHP 136

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>U2AF1_SCHPO (Q09176) Splicing factor U2AF 23 kDa subunit (U2 auxiliary factor|
           23 kDa subunit) (U2 snRNP auxiliary factor small
           subunit) (U2AF23)
          Length = 216

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 42/171 (24%), Positives = 65/171 (38%), Gaps = 24/171 (14%)
 Frame = -1

Query: 694 EVDCSFYIKTGSCRYGRACRFNHPE-RHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 518
           +V+CSFY K G+CR+G  C   H +   ++  + P    NP                 EP
Sbjct: 15  KVNCSFYYKIGACRHGERCSRKHVKPNFSQTILCPNMYKNPIH---------------EP 59

Query: 517 EPITYPQRPGETVCDFYKKTGFCKFSE-----------------------RCKFHHPVDR 407
               + QR      D + +  FC+FS+                       R K+     +
Sbjct: 60  NGKKFTQRELAEQFDAFYEDMFCEFSKYGEVEQLVVCDNVGDHLVGNVYVRFKYEESA-Q 118

Query: 406 SAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDH 254
           +A   +  R  SQ+PV   ++  P  +  EAC    +T  C+ G  C F H
Sbjct: 119 NAIDDLNSRWYSQRPVYAELS--PVTDFREACCRQHETSECQRGGLCNFMH 167

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>CS007_HUMAN (Q9UPT8) Zinc finger CCCH-type domain-containing protein C19orf7|
          Length = 1303

 Score = 39.7 bits (91), Expect = 0.009
 Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 9/102 (8%)
 Frame = -1

Query: 517 EPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGF 338
           +P     + G+ +C ++ + G C + + C F H ++      + K           + GF
Sbjct: 383 KPHQQSDKKGKVICKYFVE-GRCTWGDHCNFSHDIELPKKRELCK---------FYITGF 432

Query: 337 PRREDAEACAY---------YMKTGACKFGVQCKFDHPPLGE 239
             R  AE C Y         Y  TG C  G  C F H PL E
Sbjct: 433 CAR--AENCPYMHGDFPCKLYHTTGNCINGDDCMFSHDPLTE 472

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>CS007_MOUSE (Q6ZPZ3) Zinc finger CCCH-type domain-containing protein C19orf7|
           homolog
          Length = 1304

 Score = 39.7 bits (91), Expect = 0.009
 Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 9/102 (8%)
 Frame = -1

Query: 517 EPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGF 338
           +P     + G+ +C ++ + G C + + C F H ++      + K           + GF
Sbjct: 382 KPHQQSDKKGKVICKYFVE-GRCTWGDHCNFSHDIELPKKRELCK---------FYITGF 431

Query: 337 PRREDAEACAY---------YMKTGACKFGVQCKFDHPPLGE 239
             R  AE C Y         Y  TG C  G  C F H PL E
Sbjct: 432 CAR--AENCPYMHGDFPCKLYHTTGNCINGDDCMFSHDPLTE 471

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>TTP_RAT (P47973) Tristetraproline (TTP) (Zinc finger protein 36) (Zfp-36)|
           (TIS11A protein) (TIS11)
          Length = 320

 Score = 39.3 bits (90), Expect = 0.012
 Identities = 21/78 (26%), Positives = 36/78 (46%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYY 302
           +C  Y ++G C++  +C+F H      PG +  R++++ P   T          E C  +
Sbjct: 101 LCRTYSESGRCRYGAKCQFAH-----GPGEL--RQANRHPKYKT----------ELCHKF 143

Query: 301 MKTGACKFGVQCKFDHPP 248
              G C +G +C F H P
Sbjct: 144 YLQGRCPYGSRCHFIHNP 161



 Score = 32.7 bits (73), Expect = 1.1
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 331 REDAEACAYYMKTGACKFGVQCKFDHPP 248
           R   E C  Y ++G C++G +C+F H P
Sbjct: 96  RYKTELCRTYSESGRCRYGAKCQFAHGP 123



 Score = 31.6 bits (70), Expect = 2.4
 Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
 Frame = -1

Query: 685 CSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPEPIT 506
           C  Y ++G CRYG  C+F H          PG++             R A+         
Sbjct: 102 CRTYSESGRCRYGAKCQFAHG---------PGEL-------------RQAN--------R 131

Query: 505 YPQRPGETVCDFYKKTGFCKFSERCKF-HHPV-DRSAPG 395
           +P+   E    FY + G C +  RC F H+P  D + PG
Sbjct: 132 HPKYKTELCHKFYLQ-GRCPYGSRCHFIHNPTEDLALPG 169

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>TIS1_DROME (P47980) Protein TIS11 (dTIS11)|
          Length = 436

 Score = 39.3 bits (90), Expect = 0.012
 Identities = 25/97 (25%), Positives = 38/97 (39%)
 Frame = -1

Query: 544 RAAHVPIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQ 365
           R    P+ P+      R    +C  +++ G CK+ E+C+F H       GS   R   + 
Sbjct: 119 RTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKYGEKCQFAH-------GSHELRNVHRH 171

Query: 364 PVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDH 254
           P   T          E C  +   G C +G +C F H
Sbjct: 172 PKYKT----------EYCRTFHSVGFCPYGPRCHFVH 198

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>TTP_HUMAN (P26651) Tristetraproline (TTP) (Zinc finger protein 36 homolog)|
           (Zfp-36) (TIS11A protein) (TIS11) (Growth
           factor-inducible nuclear protein NUP475) (G0/G1 switch
           regulatory protein 24)
          Length = 326

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 23/93 (24%), Positives = 40/93 (43%)
 Frame = -1

Query: 508 TYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRR 329
           T P R    +C  + ++G C++  +C+F H       G    R++++ P   T       
Sbjct: 99  TTPSRYKTELCRTFSESGRCRYGAKCQFAH-------GLGELRQANRHPKYKT------- 144

Query: 328 EDAEACAYYMKTGACKFGVQCKFDHPPLGEVIA 230
              E C  +   G C +G +C F H P  ++ A
Sbjct: 145 ---ELCHKFYLQGRCPYGSRCHFIHNPSEDLAA 174



 Score = 33.5 bits (75), Expect = 0.63
 Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 3/110 (2%)
 Frame = -1

Query: 337 PRREDAEACAYYMKTGACKFGVQCKFDHPPLGEVIANVSKQGDGKKVVGLSYVLEN*TRS 158
           P R   E C  + ++G C++G +C+F H  LGE+                        R 
Sbjct: 101 PSRYKTELCRTFSESGRCRYGAKCQFAH-GLGEL------------------------RQ 135

Query: 157 SSPSP-FRVCFCHQSISNRMCIFGCLYVYIDNGLK*FLHT--PPVLQQNI 17
           ++  P ++   CH+      C +G    +I N  +       PPVL+Q+I
Sbjct: 136 ANRHPKYKTELCHKFYLQGRCPYGSRCHFIHNPSEDLAAPGHPPVLRQSI 185

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>TTP_BOVIN (P53781) Tristetraproline (TTP) (Zinc finger protein 36 homolog)|
           (Zfp-36) (TIS11A protein) (TIS11)
          Length = 324

 Score = 38.1 bits (87), Expect = 0.026
 Identities = 27/110 (24%), Positives = 46/110 (41%)
 Frame = -1

Query: 559 PSFDFRAAHVPIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKR 380
           PS D+  +       P T  +   E +C  + ++G C++  +C+F H       G    R
Sbjct: 81  PSSDWSPSPTSPTATPTTSSRYKTE-LCRTFSESGRCRYGAKCQFAH-------GLGELR 132

Query: 379 ESSQQPVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDHPPLGEVIA 230
           ++S+ P   T          E C  +   G C +G +C F H P  ++ A
Sbjct: 133 QASRHPKYKT----------ELCHKFYLQGRCPYGSRCHFIHNPSEDLAA 172

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>ZC3H3_HUMAN (Q8IXZ2) Zinc finger CCCH-type domain-containing protein 3|
          Length = 948

 Score = 37.0 bits (84), Expect = 0.057
 Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 2/112 (1%)
 Frame = -1

Query: 406 SAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDHPPLGEVIAN 227
           S   S+A R   +   ++  A   R +  E C YY + G C  G +C + H P    +  
Sbjct: 642 SCSRSLASRAVQRSLAIIRQARQRREKRKEYCMYYNRFGRCNRGERCPYIHDPEKVAVCT 701

Query: 226 VSKQGDGKKVVGLSYVLEN*TRSSSPSPFRVC--FCHQSISNRMCIFGCLYV 77
              +G  KK  G      + ++   P    VC  F     SN  C +  +YV
Sbjct: 702 RFVRGTCKKTDGTCPFSHHVSKEKMP----VCSYFLKGICSNSNCPYSHVYV 749

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>U2AF1_HUMAN (Q01081) Splicing factor U2AF 35 kDa subunit (U2 auxiliary factor|
           35 kDa subunit) (U2 snRNP auxiliary factor small
           subunit)
          Length = 239

 Score = 37.0 bits (84), Expect = 0.057
 Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 15/162 (9%)
 Frame = -1

Query: 694 EVDCSFYIKTGSCRYGRAC-RFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 518
           +V+CSFY K G+CR+G  C R ++    ++   +     NP      +   R A   +E 
Sbjct: 14  KVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEM 73

Query: 517 EPITYPQRPGETVCDFYKKTGFCKFSERC-------------KFHHPVD-RSAPGSIAKR 380
           +   Y +   E   +  +K G  +    C             KF    D   A   +  R
Sbjct: 74  QE-HYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 132

Query: 379 ESSQQPVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDH 254
             + QP+   ++  P  +  EAC    + G C  G  C F H
Sbjct: 133 WFNGQPIHAELS--PVTDFREACCRQYEMGECTRGGFCNFMH 172



 Score = 30.4 bits (67), Expect = 5.4
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 11/56 (19%)
 Frame = -1

Query: 340 FPRREDAEACAYYMKTGACKFGVQCKFDH--PPLGEVIA---------NVSKQGDG 206
           F   +D   C++Y K GAC+ G +C   H  P   + IA         N S+  DG
Sbjct: 8   FGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG 63

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>U2AF1_MOUSE (Q9D883) Splicing factor U2AF 35 kDa subunit (U2 auxiliary factor|
           35 kDa subunit) (U2 snRNP auxiliary factor small
           subunit)
          Length = 238

 Score = 37.0 bits (84), Expect = 0.057
 Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 15/162 (9%)
 Frame = -1

Query: 694 EVDCSFYIKTGSCRYGRAC-RFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEP 518
           +V+CSFY K G+CR+G  C R ++    ++   +     NP      +   R A   +E 
Sbjct: 14  KVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEM 73

Query: 517 EPITYPQRPGETVCDFYKKTGFCKFSERC-------------KFHHPVD-RSAPGSIAKR 380
           +   Y +   E   +  +K G  +    C             KF    D   A   +  R
Sbjct: 74  QE-HYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 132

Query: 379 ESSQQPVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDH 254
             + QP+   ++  P  +  EAC    + G C  G  C F H
Sbjct: 133 WFNGQPIHAELS--PVTDFREACCRQYEMGECTRGGFCNFMH 172



 Score = 30.4 bits (67), Expect = 5.4
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 11/56 (19%)
 Frame = -1

Query: 340 FPRREDAEACAYYMKTGACKFGVQCKFDH--PPLGEVIA---------NVSKQGDG 206
           F   +D   C++Y K GAC+ G +C   H  P   + IA         N S+  DG
Sbjct: 8   FGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG 63

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>CTH1_YEAST (P47976) Zinc finger protein CTH1|
          Length = 325

 Score = 36.6 bits (83), Expect = 0.075
 Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 5/97 (5%)
 Frame = -1

Query: 529 PIEPEPITYPQRPGETV-----CDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQ 365
           P    P+  PQ   +T+     C+ +   G+CK+  +C+F H ++        K+ ++ +
Sbjct: 188 PCRRAPLQLPQLVNKTLYKTELCESFTIKGYCKYGNKCQFAHGLNEL---KFKKKSNNYR 244

Query: 364 PVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDH 254
                          + C  + K G C +G +C F H
Sbjct: 245 --------------TKPCINWSKLGYCPYGKRCCFKH 267

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>TTP_MOUSE (P22893) Tristetraproline (TTP) (Zinc finger protein 36) (Zfp-36)|
           (TIS11A protein) (TIS11) (Growth factor-inducible
           nuclear protein NUP475) (TPA-induced sequence 11)
          Length = 319

 Score = 36.6 bits (83), Expect = 0.075
 Identities = 20/78 (25%), Positives = 34/78 (43%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYY 302
           +C  Y ++G C++  +C+F H       G    R++++ P   T          E C  +
Sbjct: 100 LCRTYSESGRCRYGAKCQFAH-------GLGELRQANRHPKYKT----------ELCHKF 142

Query: 301 MKTGACKFGVQCKFDHPP 248
              G C +G +C F H P
Sbjct: 143 YLQGRCPYGSRCHFIHNP 160



 Score = 31.6 bits (70), Expect = 2.4
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -1

Query: 331 REDAEACAYYMKTGACKFGVQCKFDHPPLGEV 236
           R   E C  Y ++G C++G +C+F H  LGE+
Sbjct: 95  RYKTELCRTYSESGRCRYGAKCQFAH-GLGEL 125



 Score = 29.6 bits (65), Expect = 9.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 685 CSFYIKTGSCRYGRACRFNH 626
           C  Y ++G CRYG  C+F H
Sbjct: 101 CRTYSESGRCRYGAKCQFAH 120

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>MKRN2_HUMAN (Q9H000) Makorin-2 (RING finger protein 62)|
          Length = 416

 Score = 36.6 bits (83), Expect = 0.075
 Identities = 44/166 (26%), Positives = 61/166 (36%), Gaps = 16/166 (9%)
 Frame = -1

Query: 685 CSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPEPI- 509
           C +Y K G C YG  CR++    H   S   G  +   A  +PS  F + H P E     
Sbjct: 37  CKYYQK-GYCAYGTRCRYD----HTRPSAAAGGAVGTMAHSVPSPAFHSPHPPSEVTASI 91

Query: 508 --TYPQRPG--ETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESS--QQPVMLTV 347
             T    PG  E      +       +ER     P   S PGS +  + S   +P     
Sbjct: 92  VKTNSHEPGKREKRTLVLRDRNLSGMAERKT--QPSMVSNPGSCSDPQPSPEMKPHSYLD 149

Query: 346 AGFPRREDAEACAYYMK---------TGACKFGVQCKFDHPPLGEV 236
           A     +D EA + Y            G C+FG  C + H  + E+
Sbjct: 150 AIRSGLDDVEASSSYSNEQQLCPYAAAGECRFGDACVYLHGEVCEI 195



 Score = 34.3 bits (77), Expect = 0.37
 Identities = 19/72 (26%), Positives = 27/72 (37%)
 Frame = -1

Query: 469 YKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYMKTG 290
           Y   G C+   +C F H +  S P +I                         C YY K G
Sbjct: 10  YFMHGVCREGSQCLFSHDLANSKPSTI-------------------------CKYYQK-G 43

Query: 289 ACKFGVQCKFDH 254
            C +G +C++DH
Sbjct: 44  YCAYGTRCRYDH 55

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>TTP_SHEEP (Q6S9E0) Tristetraproline (TTP) (Zinc finger protein 36 homolog)|
           (Zfp-36)
          Length = 325

 Score = 36.2 bits (82), Expect = 0.098
 Identities = 21/84 (25%), Positives = 36/84 (42%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYY 302
           +C  + ++G C++  +C+F H       G    R+ S+ P   T          E C  +
Sbjct: 106 LCRTFSESGRCRYGAKCQFAH-------GLGELRQPSRHPKYKT----------ELCHKF 148

Query: 301 MKTGACKFGVQCKFDHPPLGEVIA 230
              G C +G +C F H P  ++ A
Sbjct: 149 YLQGRCPYGSRCHFIHNPSEDLAA 172



 Score = 30.0 bits (66), Expect = 7.0
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -1

Query: 331 REDAEACAYYMKTGACKFGVQCKFDHPPLGEV 236
           R   E C  + ++G C++G +C+F H  LGE+
Sbjct: 101 RYKTELCRTFSESGRCRYGAKCQFAH-GLGEL 131

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>U2AFL_MOUSE (Q64707) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
           subunit-related protein 1 (U2(RNU2) small nuclear RNA
           auxillary factor 1-like 1) (SP2)
          Length = 428

 Score = 36.2 bits (82), Expect = 0.098
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = -1

Query: 478 CDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFP--RREDAEACA 308
           C FY KTG C+F  RC   H    S+P  + K        M T  G    RR+D ++ A
Sbjct: 163 CPFYNKTGACRFGNRCSRKHDFPTSSPTLLVKS-------MFTTFGMEQCRRDDYDSDA 214



 Score = 32.0 bits (71), Expect = 1.8
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 316 ACAYYMKTGACKFGVQCKFDH 254
           +C +Y KTGAC+FG +C   H
Sbjct: 162 SCPFYNKTGACRFGNRCSRKH 182



 Score = 31.6 bits (70), Expect = 2.4
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 685 CSFYIKTGSCRYGRACRFNH 626
           C FY KTG+CR+G  C   H
Sbjct: 163 CPFYNKTGACRFGNRCSRKH 182

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>MKRN2_BRARE (Q9DFG8) Makorin-2|
          Length = 414

 Score = 35.8 bits (81), Expect = 0.13
 Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
 Frame = -1

Query: 457 GFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYMKTGACKF 278
           G C+   RC F H +  S P +I                         C YY + GAC +
Sbjct: 14  GVCREGSRCLFSHDLTTSKPSTI-------------------------CKYYQR-GACAY 47

Query: 277 GVQCKFDH--PP 248
           G +C++DH  PP
Sbjct: 48  GDRCRYDHIKPP 59



 Score = 29.6 bits (65), Expect = 9.1
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = -1

Query: 484 TVCDFYKKTGFCKFSERCKFHH--PVDR--SAPGSIAKRESS 371
           T+C +Y++ G C + +RC++ H  P  R   AP   + R SS
Sbjct: 35  TICKYYQR-GACAYGDRCRYDHIKPPGRGSGAPADHSNRSSS 75

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>U2AFL_HUMAN (Q15695) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
           subunit-related protein 1 (U2(RNU2) small nuclear RNA
           auxillary factor 1-like 1)
          Length = 479

 Score = 35.8 bits (81), Expect = 0.13
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -1

Query: 478 CDFYKKTGFCKFSERCKFHHPVDRSAPGSIAK 383
           C FY KTG C+F +RC   H    S+P  + K
Sbjct: 177 CPFYSKTGACRFGDRCSRKHNFPTSSPTLLIK 208



 Score = 33.1 bits (74), Expect = 0.83
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 328 EDAEACAYYMKTGACKFGVQCKFDH 254
           +D   C +Y KTGAC+FG +C   H
Sbjct: 172 KDRANCPFYSKTGACRFGDRCSRKH 196



 Score = 31.6 bits (70), Expect = 2.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 688 DCSFYIKTGSCRYGRACRFNH 626
           +C FY KTG+CR+G  C   H
Sbjct: 176 NCPFYSKTGACRFGDRCSRKH 196

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>U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
           subunit related-protein 2 (U2(RNU2) small nuclear RNA
           auxillary factor 1-like 2) (NY-REN-20 antigen)
          Length = 482

 Score = 35.8 bits (81), Expect = 0.13
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -1

Query: 478 CDFYKKTGFCKFSERCKFHHPVDRSAPGSIAK 383
           C FY KTG C+F +RC   H    S+P  + K
Sbjct: 172 CPFYSKTGACRFGDRCSRKHNFPTSSPTLLIK 203



 Score = 33.1 bits (74), Expect = 0.83
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 328 EDAEACAYYMKTGACKFGVQCKFDH 254
           +D   C +Y KTGAC+FG +C   H
Sbjct: 167 KDRANCPFYSKTGACRFGDRCSRKH 191



 Score = 31.6 bits (70), Expect = 2.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 688 DCSFYIKTGSCRYGRACRFNH 626
           +C FY KTG+CR+G  C   H
Sbjct: 171 NCPFYSKTGACRFGDRCSRKH 191

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>U2AFM_MOUSE (Q62377) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
           subunit related-protein 2 (U2(RNU2) small nuclear RNA
           auxillary factor 1-like 2)
          Length = 462

 Score = 35.8 bits (81), Expect = 0.13
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -1

Query: 478 CDFYKKTGFCKFSERCKFHHPVDRSAPGSIAK 383
           C FY KTG C+F +RC   H    S+P  + K
Sbjct: 176 CPFYSKTGACRFGDRCSRKHNFPTSSPTLLIK 207



 Score = 33.1 bits (74), Expect = 0.83
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 328 EDAEACAYYMKTGACKFGVQCKFDH 254
           +D   C +Y KTGAC+FG +C   H
Sbjct: 171 KDRANCPFYSKTGACRFGDRCSRKH 195



 Score = 31.6 bits (70), Expect = 2.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 688 DCSFYIKTGSCRYGRACRFNH 626
           +C FY KTG+CR+G  C   H
Sbjct: 175 NCPFYSKTGACRFGDRCSRKH 195

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>CWC24_NEUCR (Q7SDY3) Pre-mRNA-splicing factor cwc-24|
          Length = 405

 Score = 35.8 bits (81), Expect = 0.13
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHHPVDRSAPG 395
           VC  YK+TGFC F + CKF H  +  A G
Sbjct: 226 VCKDYKQTGFCGFGDNCKFLHAREDYAHG 254

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>NAB2_YEAST (P32505) Nuclear polyadenylated RNA-binding protein NAB2|
          Length = 525

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 42/156 (26%), Positives = 60/156 (38%), Gaps = 19/156 (12%)
 Frame = -1

Query: 658 CRYGR-----ACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPI----EPEPIT 506
           C++G      +C F HP   NE + V   +         + + R AH  +    E +PI+
Sbjct: 340 CKFGALCSNPSCPFGHPTPANEDAKVIDLMWCDKNLTCDNPECRKAHSSLSKIKEVKPIS 399

Query: 505 YPQRPGETVCDFYKKTGFCKF-----SERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAG 341
             +     V    K    CKF     ++RCK+ H     A   I  RE +    +  + G
Sbjct: 400 QKKAAPPPV---EKSLEQCKFGTHCTNKRCKYRH-----ARSHIMCREGANCTRIDCLFG 451

Query: 340 FPRREDAEACAYYMKTGACKFGVQCK-----FDHPP 248
            P  ED            C+FGV CK     F HPP
Sbjct: 452 HPINED------------CRFGVNCKNIYCLFRHPP 475

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>RN113_CAEEL (O17917) Putative RING finger protein 113 homolog|
          Length = 384

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHHPVDRS 404
           +C  YK+TGFC F + CKF H  DRS
Sbjct: 180 ICKDYKETGFCTFGDSCKFVH--DRS 203

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>YTH1_YEAST (Q06102) Protein YTH1|
          Length = 208

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
 Frame = -1

Query: 478 CDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEA-CAYY 302
           C F+ K G+C  S  C++ H +D ++   I K E+ +       +  PRR   +  C  Y
Sbjct: 95  CVFFSKNGYCTQSPDCQYLH-IDPAS--KIPKCENYEMGFCPLGSSCPRRHIKKVFCQRY 151

Query: 301 MKTGACKFGV-QCKFDHP 251
           M TG C  G  +C  +HP
Sbjct: 152 M-TGFCPLGKDECDMEHP 168

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>ZC3H8_HUMAN (Q8N5P1) Zinc finger CCCH-type domain-containing protein 8|
          Length = 291

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 9/94 (9%)
 Frame = -1

Query: 499 QRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDA 320
           +R G+ +C ++ +   C   ++CKF H          A+ E  ++     V G+  R   
Sbjct: 190 ERKGKQICKYFLERK-CIKGDQCKFDHD---------AEIEKKKEMCKFYVQGYCTR--G 237

Query: 319 EACAYYMKTGACKF---------GVQCKFDHPPL 245
           E C Y      CKF         G  CKF H PL
Sbjct: 238 ENCLYLHNEYPCKFYHTGTKCYQGEYCKFSHAPL 271

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>R113B_HUMAN (Q8IZP6) RING finger protein 113B (Zinc finger protein 183-like 1)|
          Length = 322

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHHPVDRS 404
           +C  YK+TGFC F + CKF H  DRS
Sbjct: 195 ICKDYKETGFCGFGDSCKFLH--DRS 218



 Score = 30.0 bits (66), Expect = 7.0
 Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 11/105 (10%)
 Frame = -1

Query: 319 EACAYYMKTGACKFGVQCKFDHP----PLGEVIANVSKQG------DGKKVVGLSYVLEN 170
           + C  Y +TG C FG  CKF H      LG  I    ++G      D    VG       
Sbjct: 194 DICKDYKETGFCGFGDSCKFLHDRSDYKLGWEIERELEEGRYCICEDENHEVG------- 246

Query: 169 *TRSSSPSPFRVCFCHQSISNRMCIFGCLYVYIDN-GLK*FLHTP 38
                   PFR   C Q+  N + +  C + + ++  L+ F  TP
Sbjct: 247 --SEEEEIPFRCFICRQAFQNPV-VTKCRHYFCESCALEHFRATP 288

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>ZN183_BOVIN (Q67ER4) Zinc finger protein 183|
          Length = 343

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHHPVDRS 404
           +C  YK+TGFC F + CKF H  DRS
Sbjct: 201 ICKDYKETGFCGFGDSCKFLH--DRS 224

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>R113A_HUMAN (O15541) RING finger protein 113A (Zinc finger protein 183)|
          Length = 343

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHHPVDRS 404
           +C  YK+TGFC F + CKF H  DRS
Sbjct: 201 ICKDYKETGFCGFGDSCKFLH--DRS 224

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>TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) (EGF-response|
           factor 2) (ERF-2)
          Length = 492

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 20/76 (26%), Positives = 33/76 (43%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYY 302
           +C  ++++G CK+ E+C+F H       G    R  ++ P   T          E C  +
Sbjct: 158 LCRPFEESGTCKYGEKCQFAH-------GFHELRSLTRHPKYKT----------ELCRTF 200

Query: 301 MKTGACKFGVQCKFDH 254
              G C +G +C F H
Sbjct: 201 HTIGFCPYGPRCHFIH 216

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>TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein)|
          Length = 367

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 20/76 (26%), Positives = 33/76 (43%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYY 302
           +C  ++++G CK+ E+C+F H       G    R  ++ P   T          E C  +
Sbjct: 131 LCRPFEESGTCKYGEKCQFAH-------GFHELRSLTRHPKYKT----------ELCRTF 173

Query: 301 MKTGACKFGVQCKFDH 254
              G C +G +C F H
Sbjct: 174 HTIGFCPYGPRCHFIH 189

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>MKRN2_MOUSE (Q9ERV1) Makorin-2|
          Length = 416

 Score = 34.7 bits (78), Expect = 0.28
 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
 Frame = -1

Query: 469 YKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYMKTG 290
           Y   G C+   +C F H +  S P +I                         C YY K G
Sbjct: 10  YFMHGVCREGSQCLFSHDLANSKPSTI-------------------------CKYYQK-G 43

Query: 289 ACKFGVQCKFDH--PP 248
            C +G +C++DH  PP
Sbjct: 44  YCAYGARCRYDHTKPP 59



 Score = 31.2 bits (69), Expect = 3.1
 Identities = 21/100 (21%), Positives = 37/100 (37%)
 Frame = -1

Query: 694 EVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPE 515
           +V C +++  G CR G  C F+H   +++ S                             
Sbjct: 5   QVTCRYFMH-GVCREGSQCLFSHDLANSKPS----------------------------- 34

Query: 514 PITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPG 395
                     T+C +Y+K G+C +  RC++ H    +A G
Sbjct: 35  ----------TICKYYQK-GYCAYGARCRYDHTKPPAAAG 63



 Score = 30.0 bits (66), Expect = 7.0
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = -1

Query: 685 CSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAH 533
           C +Y K G C YG  CR++H +    A    G   NP+    PS    + H
Sbjct: 37  CKYYQK-GYCAYGARCRYDHTKPPAAAGGAVGPAPNPS----PSSGLHSPH 82

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>CWC24_EMENI (Q5AVC5) Pre-mRNA-splicing factor cwc24|
          Length = 332

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = -1

Query: 580 NPAAKFLPSFDFRAAHVPIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHH 419
           NP A   P+  F     P     +T+     + VC  YK TG+C F + CKF H
Sbjct: 138 NPNA---PAKTFGPIKAPTNVRTVTFMDYAPD-VCKDYKLTGYCGFGDSCKFSH 187

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>DHX57_MOUSE (Q6P5D3) Putative ATP-dependent RNA helicase DHX57 (EC 3.6.1.-)|
           (DEAH box protein 57)
          Length = 1388

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
 Frame = -1

Query: 334 RREDAEACAYYMKTGACKFGVQCKFDH--PP---LGEVIANVS 221
           R    E C +Y+K G CKFG +CKF H  PP   +G    NV+
Sbjct: 298 RDTSPETCKFYLK-GNCKFGSKCKFKHEVPPHQMIGRAERNVN 339



 Score = 30.4 bits (67), Expect = 5.4
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -1

Query: 478 CDFYKKTGFCKFSERCKFHHPV 413
           C FY K G CKF  +CKF H V
Sbjct: 305 CKFYLK-GNCKFGSKCKFKHEV 325



 Score = 30.4 bits (67), Expect = 5.4
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -1

Query: 685 CSFYIKTGSCRYGRACRFNH 626
           C FY+K G+C++G  C+F H
Sbjct: 305 CKFYLK-GNCKFGSKCKFKH 323

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>ZFS1_SCHPO (P47979) Zinc-finger protein zfs1|
          Length = 404

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 18/75 (24%), Positives = 34/75 (45%)
 Frame = -1

Query: 478 CDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYM 299
           C  ++ +G C++  +C+F H       G+   +E  + P          +  +E C  +M
Sbjct: 332 CKNWQISGTCRYGSKCQFAH-------GNQELKEPPRHP----------KYKSERCRSFM 374

Query: 298 KTGACKFGVQCKFDH 254
             G C +G++C F H
Sbjct: 375 MYGYCPYGLRCCFLH 389

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>CWC24_USTMA (Q4P400) Pre-mRNA-splicing factor CWC24|
          Length = 355

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHHPVDRS 404
           VC  YK+TG+C F + CKF H  DRS
Sbjct: 202 VCKDYKETGYCGFGDTCKFLH--DRS 225

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>ZC3H3_MOUSE (Q8CHP0) Zinc finger CCCH-type domain-containing protein 3|
          Length = 950

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 2/108 (1%)
 Frame = -1

Query: 394 SIAKRESSQQPVMLTVAGFPRREDAEACAYYMKTGACKFGVQCKFDHPPLGEVIANVSKQ 215
           S+A R   +   ++  A   + +  E C YY + G C  G  C + H P    +     +
Sbjct: 641 SLASRAIQRSLAIIRQAKQKKEKKREYCMYYNRFGRCNRGECCPYIHDPEKVAVCTRFVR 700

Query: 214 GDGKKVVGLSYVLEN*TRSSSPSPFRVC--FCHQSISNRMCIFGCLYV 77
           G  KK  G      + ++   P    VC  F     SN  C +  +YV
Sbjct: 701 GTCKKTDGSCPFSHHVSKEKMP----VCSYFLKGICSNSNCPYSHVYV 744

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>DHX57_HUMAN (Q6P158) Putative ATP-dependent RNA helicase DHX57 (EC 3.6.1.-)|
           (DEAH box protein 57)
          Length = 1386

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -1

Query: 319 EACAYYMKTGACKFGVQCKFDHP-PLGEVIANVSKQGD 209
           E C +Y+K G CKFG +C+F H  P  +++  + +  D
Sbjct: 303 EICKFYLK-GNCKFGSKCRFKHEVPPNQIVGRIERSVD 339



 Score = 32.0 bits (71), Expect = 1.8
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 685 CSFYIKTGSCRYGRACRFNHPERHNE 608
           C FY+K G+C++G  CRF H    N+
Sbjct: 305 CKFYLK-GNCKFGSKCRFKHEVPPNQ 329



 Score = 30.4 bits (67), Expect = 5.4
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHHPV 413
           +C FY K G CKF  +C+F H V
Sbjct: 304 ICKFYLK-GNCKFGSKCRFKHEV 325

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>K0853_HUMAN (Q5T200) Protein KIAA0853|
          Length = 1668

 Score = 33.9 bits (76), Expect = 0.48
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 694 EVDCSFYIKTGSCRYGRACRFNH 626
           E  C  ++KTG+C YG  CRF H
Sbjct: 39  ETQCRNWLKTGNCLYGNTCRFVH 61



 Score = 29.6 bits (65), Expect = 9.1
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -1

Query: 376 SSQQPVMLTVAGFPRREDAEA-CAYYMKTGACKFGVQCKFDHPP 248
           +S++P +    G      AE  C  ++KTG C +G  C+F H P
Sbjct: 20  TSRRPSVFERLGPSTGSTAETQCRNWLKTGNCLYGNTCRFVHGP 63

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>MKRN2_SERQU (Q9DD48) Makorin-2 (Zinc finger protein YGHLC3HC4)|
          Length = 423

 Score = 33.9 bits (76), Expect = 0.48
 Identities = 17/68 (25%), Positives = 27/68 (39%)
 Frame = -1

Query: 457 GFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYMKTGACKF 278
           G C+   RC F H ++ S P +I                         C +Y + G C +
Sbjct: 14  GVCREGSRCLFSHDLNNSKPSTI-------------------------CKFYQR-GVCAY 47

Query: 277 GVQCKFDH 254
           G +C++DH
Sbjct: 48  GERCRYDH 55



 Score = 31.6 bits (70), Expect = 2.4
 Identities = 23/102 (22%), Positives = 37/102 (36%), Gaps = 2/102 (1%)
 Frame = -1

Query: 694 EVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPE 515
           +V C +++  G CR G  C F+H   +++ S                             
Sbjct: 5   QVTCRYFLH-GVCREGSRCLFSHDLNNSKPS----------------------------- 34

Query: 514 PITYPQRPGETVCDFYKKTGFCKFSERCKFHH--PVDRSAPG 395
                     T+C FY++ G C + ERC++ H  P  R   G
Sbjct: 35  ----------TICKFYQR-GVCAYGERCRYDHIKPSSRGGGG 65

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>U2AF1_DROME (Q94535) Splicing factor U2af 38 kDa subunit (U2 auxiliary factor|
           38 kDa subunit) (U2 snRNP auxiliary factor small
           subunit)
          Length = 264

 Score = 33.5 bits (75), Expect = 0.63
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = -1

Query: 694 EVDCSFYIKTGSCRYGRAC-RFNHPERHNEASVVPGKILNP 575
           +V+CSFY K G+CR+G  C R ++    ++  ++    +NP
Sbjct: 15  KVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNP 55



 Score = 30.4 bits (67), Expect = 5.4
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 11/60 (18%)
 Frame = -1

Query: 340 FPRREDAEACAYYMKTGACKFGVQCKFDH--PPLGEVI---------ANVSKQGDGKKVV 194
           F   +D   C++Y K GAC+ G +C   H  P   + +          N +K  DG  +V
Sbjct: 9   FGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLV 68

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>TISB_RAT (P17431) Butyrate response factor 1 (TIS11B protein) (EGF-inducible|
           protein CMG1)
          Length = 338

 Score = 33.5 bits (75), Expect = 0.63
 Identities = 19/76 (25%), Positives = 32/76 (42%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYY 302
           +C  +++ G CK+ ++C+F H       G    R  ++ P   T          E C  +
Sbjct: 119 LCRPFEENGACKYGDKCQFAH-------GIHELRSLTRHPKYKT----------ELCRTF 161

Query: 301 MKTGACKFGVQCKFDH 254
              G C +G +C F H
Sbjct: 162 HTIGFCPYGPRCHFIH 177



 Score = 30.0 bits (66), Expect = 7.0
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 331 REDAEACAYYMKTGACKFGVQCKFDH 254
           R   E C  + + GACK+G +C+F H
Sbjct: 114 RYKTELCRPFEENGACKYGDKCQFAH 139

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>TISB_MOUSE (P23950) Butyrate response factor 1 (TIS11B protein)|
          Length = 338

 Score = 33.5 bits (75), Expect = 0.63
 Identities = 19/76 (25%), Positives = 32/76 (42%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYY 302
           +C  +++ G CK+ ++C+F H       G    R  ++ P   T          E C  +
Sbjct: 119 LCRPFEENGACKYGDKCQFAH-------GIHELRSLTRHPKYKT----------ELCRTF 161

Query: 301 MKTGACKFGVQCKFDH 254
              G C +G +C F H
Sbjct: 162 HTIGFCPYGPRCHFIH 177



 Score = 30.0 bits (66), Expect = 7.0
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 331 REDAEACAYYMKTGACKFGVQCKFDH 254
           R   E C  + + GACK+G +C+F H
Sbjct: 114 RYKTELCRPFEENGACKYGDKCQFAH 139

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>TISB_HUMAN (Q07352) Butyrate response factor 1 (TIS11B protein) (EGF-response|
           factor 1) (ERF-1)
          Length = 338

 Score = 33.5 bits (75), Expect = 0.63
 Identities = 19/76 (25%), Positives = 32/76 (42%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYY 302
           +C  +++ G CK+ ++C+F H       G    R  ++ P   T          E C  +
Sbjct: 119 LCRPFEENGACKYGDKCQFAH-------GIHELRSLTRHPKYKT----------ELCRTF 161

Query: 301 MKTGACKFGVQCKFDH 254
              G C +G +C F H
Sbjct: 162 HTIGFCPYGPRCHFIH 177



 Score = 32.3 bits (72), Expect = 1.4
 Identities = 26/120 (21%), Positives = 43/120 (35%), Gaps = 3/120 (2%)
 Frame = -1

Query: 685 CSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPEPIT 506
           C  + + G+C+YG  C+F                               AH   E   +T
Sbjct: 120 CRPFEENGACKYGDKCQF-------------------------------AHGIHELRSLT 148

Query: 505 YPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVM---LTVAGFP 335
              +    +C  +   GFC +  RC F H  +     + A+  S+ +P +    + AGFP
Sbjct: 149 RHPKYKTELCRTFHTIGFCPYGPRCHFIHNAEERRALAGARDLSADRPRLQHSFSFAGFP 208



 Score = 30.0 bits (66), Expect = 7.0
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 331 REDAEACAYYMKTGACKFGVQCKFDH 254
           R   E C  + + GACK+G +C+F H
Sbjct: 114 RYKTELCRPFEENGACKYGDKCQFAH 139

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>CWC24_CRYNE (Q5KB05) Pre-mRNA-splicing factor CWC24|
          Length = 329

 Score = 33.5 bits (75), Expect = 0.63
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHH 419
           VC  YK+TGFC + + CKF H
Sbjct: 182 VCKDYKETGFCGYGDSCKFLH 202

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>CWC24_ASHGO (Q752S4) Pre-mRNA-splicing factor CWC24|
          Length = 250

 Score = 33.1 bits (74), Expect = 0.83
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHHPVD 410
           VC  Y++TGFC + + CKF H  D
Sbjct: 106 VCKDYRQTGFCGYGDSCKFLHSRD 129

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>MKRN1_MOUSE (Q9QXP6) Makorin-1|
          Length = 481

 Score = 33.1 bits (74), Expect = 0.83
 Identities = 37/149 (24%), Positives = 53/149 (35%), Gaps = 8/149 (5%)
 Frame = -1

Query: 676 YIKTGSCRYGRACRFNH--PERHNE--ASVVPGKILNPAAKFLPSFDFRAAHVPIEPEPI 509
           Y + G C YG  CR+ H  P +  E  A+ +  K    A+  L S     A +       
Sbjct: 92  YFQRGYCVYGDRCRYEHSKPLKQEEVTATDLSAKPSLAASSSLSSGVGSLAEMNSGEAES 151

Query: 508 TYPQRP--GETVCDFYKKTGFCKFSERCKFHHPVDRSAP--GSIAKRESSQQPVMLTVAG 341
             P  P  G    D+     F      C    P     P  GS+ K ES ++P  +    
Sbjct: 152 RNPSFPTVGAGSEDWVNAIEFVPGQPYCGRTAPSCTEVPPQGSVTKEESEKEPTTV---- 207

Query: 340 FPRREDAEACAYYMKTGACKFGVQCKFDH 254
               E  +    Y   G C++G  C + H
Sbjct: 208 ----ETKKQLCPYAAVGECRYGENCVYLH 232

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>CWC24_YEAST (P53769) Pre-mRNA-splicing factor CWC24 (Complexed with CEF1|
           protein 24)
          Length = 259

 Score = 33.1 bits (74), Expect = 0.83
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHHPVD 410
           VC  YK+TG+C + + CKF H  D
Sbjct: 143 VCKDYKQTGYCGYGDSCKFLHSRD 166

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>PRR3_RAT (Q6MG07) Proline-rich protein 3 (MHC class I region proline-rich|
           protein CAT56)
          Length = 186

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -1

Query: 529 PIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHP 416
           P +  P     +    VC  + K G C++ + C F+HP
Sbjct: 142 PPKDSPPMMEDKSDRPVCRHFSKKGHCRYEDHCAFYHP 179

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>CWC24_KLULA (Q6CSS6) Pre-mRNA-splicing factor CWC24|
          Length = 229

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHHPVDRSAPG 395
           +C  ++KTG+C + + CKF H  D  A G
Sbjct: 115 ICKDFQKTGYCGYGDSCKFLHSRDDVAGG 143

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>PRR3_PANTR (Q7YR36) Proline-rich protein 3 (MHC class I region proline-rich|
           protein CAT56)
          Length = 188

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -1

Query: 529 PIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHP 416
           P + +P     +    VC  + K G C++ + C F+HP
Sbjct: 144 PPKDDPQVMEDKSDRPVCRHFAKKGHCRYEDLCAFYHP 181

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>PRR3_HUMAN (P79522) Proline-rich protein 3 (MHC class I region proline-rich|
           protein CAT56)
          Length = 188

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -1

Query: 529 PIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHP 416
           P + +P     +    VC  + K G C++ + C F+HP
Sbjct: 144 PPKDDPQVMEDKSDRPVCRHFAKKGHCRYEDLCAFYHP 181

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>CWC24_ASPFU (Q4WUA0) Pre-mRNA-splicing factor cwc24|
          Length = 339

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHH 419
           VC  +K+TGFC F + CKF H
Sbjct: 175 VCKDWKQTGFCGFGDSCKFLH 195

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>PRR3_MOUSE (Q811B5) Proline-rich protein 3 (MHC class I region proline-rich|
           protein CAT56)
          Length = 190

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -1

Query: 529 PIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHP 416
           P +  P     +    VC  + K G C++ + C F+HP
Sbjct: 146 PPKDSPQMMEDKSDRPVCRHFSKKGHCRYEDHCAFYHP 183

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>CWC24_YARLI (Q6CB23) Pre-mRNA-splicing factor CWC24|
          Length = 256

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRE 377
           VC  YK TGFC + + CKF H  +    G   +RE
Sbjct: 136 VCKDYKLTGFCGYGDSCKFLHMREDYKAGWQIERE 170

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>U2AF1_PIG (Q29350) Splicing factor U2AF 35 kDa subunit (U2 auxiliary factor|
           35 kDa subunit) (U2 snRNP auxiliary factor small
           subunit) (Fragment)
          Length = 81

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -1

Query: 694 EVDCSFYIKTGSCRYGRAC-RFNHPERHNEASVVPGKILNP 575
           +V+CSFY K G+CR+G  C R ++    ++  V+     NP
Sbjct: 14  KVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNP 54

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>ZC3H8_MOUSE (Q9JJ48) Zinc finger CCCH-type domain-containing protein 8 (Fetal|
           liver zinc finger protein 1)
          Length = 305

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 9/94 (9%)
 Frame = -1

Query: 499 QRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDA 320
           +R G+ VC ++ +   C   ++CKF H          A+ E  ++     V G+  +   
Sbjct: 204 ERKGKQVCKYFLERK-CIKGDQCKFDHD---------AEIEKKKEMCKYYVQGYCTK--G 251

Query: 319 EACAYYMKTGACKF---------GVQCKFDHPPL 245
           E C Y      CKF         G  C F H PL
Sbjct: 252 ENCLYLHSEYPCKFYHTGTKCYQGDHCNFSHAPL 285

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>CTH2_YEAST (P47977) Zinc finger protein CTH2 (YTIS11 protein)|
          Length = 285

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 22/108 (20%), Positives = 43/108 (39%), Gaps = 11/108 (10%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYY 302
           +C+ +   G C +  +C+F H +     G +  ++S             +    + C  +
Sbjct: 174 LCESFTLKGSCPYGSKCQFAHGL-----GELKVKKSC------------KNFRTKPCVNW 216

Query: 301 MKTGACKFGVQCKFDHPPLGEV-----------IANVSKQGDGKKVVG 191
            K G C +G +C F H    ++           +++ SKQ D K+  G
Sbjct: 217 EKLGYCPYGRRCCFKHGDDNDIAVYVKAGTYCNVSSTSKQSDEKRSNG 264



 Score = 30.0 bits (66), Expect = 7.0
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = -1

Query: 388 AKRESSQQP-VMLTVAGFPRR-EDAEACAYYMKTGACKFGVQCKFDHPPLGEV 236
           +++ESS QP V   V   P++    E C  +   G+C +G +C+F H  LGE+
Sbjct: 148 SEKESSAQPKVKSQVQETPKQLYKTELCESFTLKGSCPYGSKCQFAH-GLGEL 199

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>MEX5_CAEEL (Q9XUB2) Zinc finger protein mex-5|
          Length = 468

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = -1

Query: 514 PITYPQRPGET-VCDFYKK--TGFCKFSERCKFHHPVDR 407
           P  YP    +T +C  + +  TGFC +  RC+F HP D+
Sbjct: 307 PARYPNNKYKTKLCKNFARGGTGFCPYGLRCEFVHPTDK 345

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>CWC24_CANGA (Q6FXX1) Pre-mRNA-splicing factor CWC24|
          Length = 226

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHHPVD 410
           VC  +K+TG+C + + CKF H  D
Sbjct: 112 VCKDFKQTGYCGYGDSCKFLHSRD 135

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>NUPL2_MOUSE (Q8CIC2) Nucleoporin-like 2 (NLP-1)|
          Length = 420

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -1

Query: 484 TVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQP 362
           T+C F+ + G C+F +RC   HP  R A G+       Q P
Sbjct: 2   TICQFFLQ-GRCRFGDRCWNEHPGARGAGGARQPPPQQQPP 41

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>ZC3H6_MOUSE (Q8BYK8) Zinc finger CCCH-type domain-containing protein 6|
          Length = 1177

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 5/90 (5%)
 Frame = -1

Query: 499 QRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRE-----SSQQPVMLTVAGFP 335
           +  G+ +C ++ + G C   + CKF+H  +      + K       +  +  +   + FP
Sbjct: 269 EHKGKQICKYFLE-GRCIKGDHCKFNHDAELEKKKEVCKYYLQGYCTKGENCIYMHSEFP 327

Query: 334 RREDAEACAYYMKTGACKFGVQCKFDHPPL 245
                  C +Y     C  G +CKF H  L
Sbjct: 328 -------CKFYHSGAKCYQGDKCKFSHDDL 350



 Score = 31.2 bits (69), Expect = 3.1
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -1

Query: 694 EVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILN 578
           E  C FY     C  G  C+F+H +   E   +  K+LN
Sbjct: 325 EFPCKFYHSGAKCYQGDKCKFSHDDLTKETRKLLDKVLN 363

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>PRR3_PIG (Q767L1) Proline-rich protein 3 (MHC class I region proline-rich|
           protein CAT56) (Fragment)
          Length = 131

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = -1

Query: 529 PIEPEPITYPQRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAP 398
           P +  P     +    VC  + K G C++ + C F+HP     P
Sbjct: 87  PPKDGPQVMEDKSDRPVCRHFAKKGHCRYEDLCAFYHPGANGPP 130

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>CWC24_SCHPO (Q9P6R8) Pre-mRNA-splicing factor cwc24 (Complexed with cdc5|
           protein 24) (Cell cycle control protein cwf24)
          Length = 533

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHH 419
           VC  YK TG+C + + CKF H
Sbjct: 189 VCKDYKLTGYCGYGDTCKFLH 209

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>YQC1_SCHPO (O74463) Hypothetical protein C1739.01 in chromosome III|
          Length = 547

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 19/75 (25%), Positives = 26/75 (34%)
 Frame = -1

Query: 478 CDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYM 299
           C F++  G C   E C F H ++   P                            C Y++
Sbjct: 47  CKFFRN-GTCTAGENCPFSHSLETERP---------------------------ICKYFL 78

Query: 298 KTGACKFGVQCKFDH 254
           K G CKFG +C   H
Sbjct: 79  K-GNCKFGPKCALSH 92

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>ZC3H6_HUMAN (P61129) Zinc finger CCCH-type domain-containing protein 6|
          Length = 1189

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -1

Query: 694 EVDCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILN 578
           E  C FY     C  G  C+F+H +   E   +  K+LN
Sbjct: 327 EFPCKFYHSGAKCYQGDNCKFSHDDLTKETKKLLDKVLN 365



 Score = 30.0 bits (66), Expect = 7.0
 Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 9/94 (9%)
 Frame = -1

Query: 499 QRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDA 320
           +  G+ +C ++ + G C   ++CKF H          A+ E  ++     + G+  +   
Sbjct: 271 EHKGKQICKYFLE-GRCIKGDQCKFDHD---------AELEKRKEICKFYLQGYCTK--G 318

Query: 319 EACAYYMKTGACKF---------GVQCKFDHPPL 245
           E C Y      CKF         G  CKF H  L
Sbjct: 319 ENCIYMHNEFPCKFYHSGAKCYQGDNCKFSHDDL 352

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>NUPL2_HUMAN (O15504) Nucleoporin-like 2 (NLP-1) (hCG1) (NUP42 homolog)|
          Length = 423

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQP 362
           +C F+ + G C+F +RC   HP  R A G   +++  QQP
Sbjct: 3   ICQFFLQ-GRCRFGDRCWNEHPGARGAGG--GRQQPQQQP 39

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>MES4_DROME (Q8MT36) Probable histone methyltransferase Mes-4 (Maternal-effect|
            sterile 4)
          Length = 1427

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 5/94 (5%)
 Frame = -1

Query: 688  DCSFYIKTGSCRYGRACRFNHPERHNEASVVPGKILNPAAKFLPSFDFRAAHVPIEPEPI 509
            D    +  G+      C    PE      V+  ++ +PA    P  +  ++H PIE + +
Sbjct: 843  DAKEVVAVGTSLVCHECNVGEPE----GCVICHQVESPAVPSTPRKEDSSSHTPIEDKLL 898

Query: 508  TYPQ-----RPGETVCDFYKKTGFCKFSERCKFH 422
            T  Q     R   + C ++ +    K S RC  H
Sbjct: 899  TCSQPMCGKRFHTSCCKYWPQASSSKHSARCPRH 932

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>CWC24_DEBHA (Q6BYU0) Pre-mRNA-splicing factor CWC24|
          Length = 232

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = -1

Query: 529 PIEPEPITYPQRP----GETVCDFYKKTGFCKFSERCKFHH 419
           PI+P PI+            VC  + +TG+C + + CKF H
Sbjct: 97  PIKPPPISIKTTTITDFQPDVCKDFLQTGYCGYGDTCKFLH 137

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>MKRN1_MACEU (Q9TT91) Makorin-1|
          Length = 478

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 37/149 (24%), Positives = 54/149 (36%), Gaps = 8/149 (5%)
 Frame = -1

Query: 676 YIKTGSCRYGRACRFNH--PERHNE--ASVVPGKILNPAAKFLPSFDFRAAHVPI-EPEP 512
           Y + G C YG  CR+ H  P +  E  A+ +  K   PA+  LP+     A V   E E 
Sbjct: 88  YYQRGCCAYGDRCRYEHTKPLKREEVTAANLAAKSDLPASSSLPALVEPLAEVSTGEAES 147

Query: 511 ITYP-QRPGETVCDFYKKTGFCKFSERCKFHHPVDRSAP--GSIAKRESSQQPVMLTVAG 341
           +       G    D+     F      C    P    AP  G + + E  +Q   +    
Sbjct: 148 VNSNFAAAGAGGEDWVNAIEFVPGQPYCGRAAPSCTEAPLQGMVIEEELEKQQTNV---- 203

Query: 340 FPRREDAEACAYYMKTGACKFGVQCKFDH 254
               E  +    Y   G C++G  C + H
Sbjct: 204 ----EMKKQLCPYAAVGECRYGENCVYLH 228



 Score = 30.0 bits (66), Expect = 7.0
 Identities = 16/72 (22%), Positives = 26/72 (36%)
 Frame = -1

Query: 469 YKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYMKTG 290
           Y   G CK    C++ H +  S                         + A  C YY + G
Sbjct: 59  YFMHGVCKKGNNCRYSHDLSTS-------------------------QSAMVCRYYQR-G 92

Query: 289 ACKFGVQCKFDH 254
            C +G +C+++H
Sbjct: 93  CCAYGDRCRYEH 104

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>MEX6_CAEEL (Q09436) Zinc finger protein mex-6|
          Length = 467

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 17/67 (25%), Positives = 25/67 (37%)
 Frame = -1

Query: 451 CKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEACAYYMKTGACKFGV 272
           C    RCKF H +       I  R  + +        F R            +G C +G+
Sbjct: 289 CALGARCKFAHGLKELRASDIPTRYPNNKYKTKLCKNFARGG----------SGVCPYGL 338

Query: 271 QCKFDHP 251
           +C+F HP
Sbjct: 339 RCEFVHP 345

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>PIE1_CAEEL (Q94131) Pharynx and intestine in excess protein 1 (Protein pie-1)|
          Length = 335

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 18/106 (16%), Positives = 37/106 (34%), Gaps = 30/106 (28%)
 Frame = -1

Query: 481 VCDFYKKTGFCKFSERCKFHHPVDRSAPGSIAKRESSQQPVMLTVAGFPRREDAEA---- 314
           +CD +++ G+C +++ C + H  D        +   S+ P         RR+D +     
Sbjct: 103 LCDAFRREGYCPYNDNCTYAHGQDELRVPRRRQEYYSRDPPRERRDSRSRRDDVDTTINR 162

Query: 313 --------------------------CAYYMKTGACKFGVQCKFDH 254
                                       +  + G C++G +C+F H
Sbjct: 163 SSSSASKHHDENRRPSNNHGSSNRRQICHNFERGNCRYGPRCRFIH 208

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>CD59B_MOUSE (P58019) CD59B glycoprotein precursor (Membrane attack complex|
           inhibition factor) (MACIF) (MAC-inhibitory protein)
           (MAC-IP) (Protectin)
          Length = 129

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
 Frame = +1

Query: 13  YKC----SAAKLEVYEGIILDHCLYKHIDIQIYTFCWRCSDDRNRLEMGMGNLSG 165
           Y C    S+ K+       LD CLY     Q+Y  CW+ SD  +   M   +++G
Sbjct: 27  YNCFQFVSSCKINTTCSPNLDSCLYAVAGRQVYQQCWKLSDCNSNYIMSRLDVAG 81


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,491,908
Number of Sequences: 219361
Number of extensions: 2363010
Number of successful extensions: 6740
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 5987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6546
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6912958834
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result