ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63j23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK112116.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 5e-29
2dbj|AK111682.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 5e-29
3gb|BT018396.1| Zea mays clone EL01N0320H11.d mRNA sequence 76 2e-10
4gb|AY107394.1| Zea mays PCO105453 mRNA sequence 76 2e-10
5ref|NM_192796.1| Oryza sativa (japonica cultivar-group), predic... 68 4e-08
6gb|BT019067.1| Zea mays clone Contig625.F mRNA sequence 64 7e-07
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 62 3e-06
8dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic D... 62 3e-06
9ref|XM_421321.1| PREDICTED: Gallus gallus similar to hypothetica... 44 0.61
10dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.61
11gb|AC087549.2|AC087549 Oryza sativa (japonica cultivar-group) ch... 44 0.61
12gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.61
13gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 42 2.4
14gb|AC131695.4| Mus musculus BAC clone RP23-396F8 from chromosome... 42 2.4
15gb|AC156164.2| Mus musculus BAC clone RP24-75M13 from chromosome... 42 2.4
16gb|AC109585.4| Homo sapiens chromosome 3 clone RP11-802J21, comp... 42 2.4
17gb|AC127322.4| Mus musculus BAC clone RP23-238A8 from chromosome... 42 2.4
18gb|AC096916.2| Homo sapiens chromosome 3 clone RP11-92I24, compl... 42 2.4
19emb|CR339049.6| Zebrafish DNA sequence from clone CH211-165D12 i... 42 2.4
20gb|AC114487.2| Homo sapiens chromosome 1 clone RP4-706L14, compl... 42 2.4
21gb|AC102372.8| Mus musculus chromosome 5, clone RP23-262J12, com... 42 2.4
22gb|AC133936.5| Mus musculus BAC clone RP24-399H1 from chromosome... 42 2.4
23gb|AF246686.1| Pemphigus spyrothecae microsatellite 98PS23 sequence 40 9.5
24gb|AC157554.7| Mus musculus chromosome 15, clone RP24-324P21, co... 40 9.5
25gb|AC167221.9| Mus musculus 10 BAC RP23-3P24 (Roswell Park Cance... 40 9.5
26gb|AC166082.11| Mus musculus 10 BAC RP23-150M2 (Roswell Park Can... 40 9.5
27gb|AC140459.2| Mus musculus BAC clone RP24-129G21 from chromosom... 40 9.5
28emb|Z68221.1|CEW09C2 Caenorhabditis elegans Cosmid W09C2, comple... 40 9.5
29gb|AC107369.9| Mus musculus chromosome 15, clone RP23-368M2, com... 40 9.5
30gb|AC138228.10| Mus musculus chromosome 17, clone RP23-304G12, c... 40 9.5
31gb|AC166654.1| Mus musculus BAC clone RP23-426B21 from chromosom... 40 9.5
32emb|AL035417.15|HS891H21 Human DNA sequence from clone RP5-891H2... 40 9.5
33emb|AL031657.5|HS28F12 Human DNA sequence from clone RP1-28F12 o... 40 9.5
34gb|AC113349.2| Homo sapiens chromosome 5 clone CTD-2544H17, comp... 40 9.5
35gb|AC104083.3| Homo sapiens BAC clone RP11-588K22 from 4, comple... 40 9.5
36gb|AF316419.1|AF316419 Lolium perenne terminal flower 1-like pro... 40 9.5
37gb|AC008436.5|AC008436 Homo sapiens chromosome 5 clone CTC-327B1... 40 9.5
38gb|AC005043.2|AC005043 Homo sapiens BAC clone RP11-576N21 from 1... 40 9.5
39gb|AC087879.8| Homo sapiens 12q BAC RP11-166B14 (Roswell Park Ca... 40 9.5
40gb|AC146595.2| Mus musculus BAC clone RP24-164G18 from chromosom... 40 9.5
41gb|AF233751.1|AF233746S6 Homo sapiens soluble guanylate cyclase ... 40 9.5
42gb|AC123634.10| Mus musculus chromosome 3, clone RP24-434E24, co... 40 9.5
43emb|AL122125.4|CNS01DT0 Human chromosome 14 DNA sequence BAC R-1... 40 9.5
44emb|AL669920.15| Mouse DNA sequence from clone RP23-263C23 on ch... 40 9.5
45emb|AL929144.10| Mouse DNA sequence from clone RP23-441D24 on ch... 40 9.5
46emb|AL603843.15| Mouse DNA sequence from clone RP23-412D17 on ch... 40 9.5
47dbj|AP003179.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 9.5 
>dbj|AK112116.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-E06, full
            insert sequence
          Length = 1768

 Score =  137 bits (69), Expect = 5e-29
 Identities = 243/301 (80%)
 Strand = Plus / Minus

                                                                        
Query: 255  tggtcaaacttgcactggacgccaaacttgcatgcgcccgtcttcatgtaataggcgcag 314
            ||||| ||||||||||| |  |||||||||||  |||| |||||||||||  |||| || 
Sbjct: 1432 tggtcgaacttgcactgcataccaaacttgcacacgccagtcttcatgtagaaggcacat 1373

                                                                        
Query: 315  gcctcagcatcctctctccttggaaagccagcaacagtaagcatcacaggttgctgagat 374
             || | ||||||||||| ||||| | |||||||| |||||||  |||||  | || ||  
Sbjct: 1372 accacggcatcctctcttcttggtaggccagcaagagtaagctgcacagactcctcagca 1313

                                                                        
Query: 375  gactcccgctttgcaatggaaccaggtgcagaccgatcaactggatggtgaaacttgcat 434
            | |||||  ||||||  || | | || ||||| ||||||| ||| |||||||||||||||
Sbjct: 1312 ggctcccagtttgcagagggatcgggagcagaacgatcaattgggtggtgaaacttgcat 1253

                                                                        
Query: 435  ctttcagaaaatttacaaaatcctgtcttcttatagaaatcacaaacagtttctccaggc 494
            |  |||| ||| || ||||||||||||||| | |||||||||||||||||| ||||||||
Sbjct: 1252 cggtcagcaaacttgcaaaatcctgtcttcatgtagaaatcacaaacagttgctccaggc 1193

                                                                        
Query: 495  ctctgagggtaggtgattggctcaggttcaatcggcacatgggccgcgcgaaaatcaaag 554
            ||||| || ||||||| |||| ||||| |||  ||||  || |||||  |||||||||||
Sbjct: 1192 ctctggggataggtgactggcccaggtccaacaggcatgtgtgccgcatgaaaatcaaag 1133

             
Query: 555  c 555
            |
Sbjct: 1132 c 1132
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>dbj|AK111682.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159G03, full
            insert sequence
          Length = 1724

 Score =  137 bits (69), Expect = 5e-29
 Identities = 243/301 (80%)
 Strand = Plus / Minus

                                                                        
Query: 255  tggtcaaacttgcactggacgccaaacttgcatgcgcccgtcttcatgtaataggcgcag 314
            ||||| ||||||||||| |  |||||||||||  |||| |||||||||||  |||| || 
Sbjct: 1434 tggtcgaacttgcactgcataccaaacttgcacacgccagtcttcatgtagaaggcacat 1375

                                                                        
Query: 315  gcctcagcatcctctctccttggaaagccagcaacagtaagcatcacaggttgctgagat 374
             || | ||||||||||| ||||| | |||||||| |||||||  |||||  | || ||  
Sbjct: 1374 accacggcatcctctcttcttggtaggccagcaagagtaagctgcacagactcctcagca 1315

                                                                        
Query: 375  gactcccgctttgcaatggaaccaggtgcagaccgatcaactggatggtgaaacttgcat 434
            | |||||  ||||||  || | | || ||||| ||||||| ||| |||||||||||||||
Sbjct: 1314 ggctcccagtttgcagagggatcgggagcagaacgatcaattgggtggtgaaacttgcat 1255

                                                                        
Query: 435  ctttcagaaaatttacaaaatcctgtcttcttatagaaatcacaaacagtttctccaggc 494
            |  |||| ||| || ||||||||||||||| | |||||||||||||||||| ||||||||
Sbjct: 1254 cggtcagcaaacttgcaaaatcctgtcttcatgtagaaatcacaaacagttgctccaggc 1195

                                                                        
Query: 495  ctctgagggtaggtgattggctcaggttcaatcggcacatgggccgcgcgaaaatcaaag 554
            ||||| || ||||||| |||| ||||| |||  ||||  || |||||  |||||||||||
Sbjct: 1194 ctctggggataggtgactggcccaggtccaacaggcatgtgtgccgcatgaaaatcaaag 1135

             
Query: 555  c 555
            |
Sbjct: 1134 c 1134
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>gb|BT018396.1| Zea mays clone EL01N0320H11.d mRNA sequence
          Length = 1594

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 89/106 (83%)
 Strand = Plus / Minus

                                                                        
Query: 420  tggtgaaacttgcatctttcagaaaatttacaaaatcctgtcttcttatagaaatcacaa 479
            ||||||||||||||| | | |||| | || ||| ||||||||||| | || |||||||||
Sbjct: 1156 tggtgaaacttgcatttctgagaatacttgcaagatcctgtcttcatgtaaaaatcacaa 1097

                                                          
Query: 480  acagtttctccaggcctctgagggtaggtgattggctcaggttcaa 525
            ||||||||||| ||||| ||||| ||| | ||||||  ||||||||
Sbjct: 1096 acagtttctcctggcctttgaggatagatcattggcaaaggttcaa 1051



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 298  tcatgtaataggcgcaggcctcagcatcctctctccttgg 337
            |||||||  |||| || |||||||| ||||||||||||||
Sbjct: 1269 tcatgtagaaggcacaagcctcagcgtcctctctccttgg 1230
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>gb|AY107394.1| Zea mays PCO105453 mRNA sequence
          Length = 594

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 89/106 (83%)
 Strand = Plus / Minus

                                                                       
Query: 420 tggtgaaacttgcatctttcagaaaatttacaaaatcctgtcttcttatagaaatcacaa 479
           ||||||||||||||| | | |||| | || ||| ||||||||||| | || |||||||||
Sbjct: 119 tggtgaaacttgcatttctgagaatacttgcaagatcctgtcttcatgtaaaaatcacaa 60

                                                         
Query: 480 acagtttctccaggcctctgagggtaggtgattggctcaggttcaa 525
           ||||||||||| ||||| ||||| ||| | ||||||  ||||||||
Sbjct: 59  acagtttctcctggcctttgaggatagatcattggcaaaggttcaa 14



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 298 tcatgtaataggcgcaggcctcagcatcctctctccttgg 337
           |||||||  |||| || |||||||| ||||||||||||||
Sbjct: 232 tcatgtagaaggcacaagcctcagcgtcctctctccttgg 193
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>ref|NM_192796.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2118

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 157/198 (79%)
 Strand = Plus / Minus

                                                                        
Query: 276  ccaaacttgcatgcgcccgtcttcatgtaataggcgcaggcctcagcatcctctctcctt 335
            |||||||||||  |||| |||||||||||  |||| ||  || | ||||||||||| |||
Sbjct: 1664 ccaaacttgcacacgccagtcttcatgtagaaggcacataccacggcatcctctcttctt 1605

                                                                        
Query: 336  ggaaagccagcaacagtaagcatcacaggttgctgagatgactcccgctttgcaatggaa 395
            || | |||||||| |||||||  |||||  | || ||  | |||||  ||||||  || |
Sbjct: 1604 ggtaggccagcaagagtaagctgcacagactcctcagcaggctcccagtttgcagaggga 1545

                                                                        
Query: 396  ccaggtgcagaccgatcaactggatggtgaaacttgcatctttcagaaaatttacaaaat 455
             | || ||||| ||||||| ||| ||||||||||||||||  |||| ||| || ||||||
Sbjct: 1544 tcgggagcagaacgatcaattgggtggtgaaacttgcatcggtcagcaaacttgcaaaat 1485

                              
Query: 456  cctgtcttcttatagaaa 473
            ||||||||| | ||||||
Sbjct: 1484 cctgtcttcatgtagaaa 1467
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>gb|BT019067.1| Zea mays clone Contig625.F mRNA sequence
          Length = 776

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 80/96 (83%)
 Strand = Plus / Minus

                                                                       
Query: 420 tggtgaaacttgcatctttcagaaaatttacaaaatcctgtcttcttatagaaatcacaa 479
           ||||||||||||| | | | |||| | || ||| ||||||||||| | || |||||||||
Sbjct: 336 tggtgaaacttgcctttctgagaatacttgcaagatcctgtcttcatgtaaaaatcacaa 277

                                               
Query: 480 acagtttctccaggcctctgagggtaggtgattggc 515
           ||||||||||| ||||| ||||| ||| | ||||||
Sbjct: 276 acagtttctcctggcctttgaggatagatcattggc 241



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 298 tcatgtaataggcgcaggcctcagcatcctctctccttgg 337
           |||||||  |||| || |||||||| ||||||||||||||
Sbjct: 449 tcatgtagaaggcacaagcctcagcgtcctctctccttgg 410
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                            
Query: 402      gcagaccgatcaactggatggtgaaacttgcatctttcagaaaatttacaaaatcctgtc 461
                ||||| ||||||| ||| ||||||||||||||||  |||| ||| || ||||||||||||
Sbjct: 24468870 gcagaacgatcaattgggtggtgaaacttgcatcggtcagcaaacttgcaaaatcctgtc 24468929

                   
Query: 462      ttc 464
                |||
Sbjct: 24468930 ttc 24468932



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                                 
Query: 473      atcacaaacagtttctccaggcctctgagggtaggtgattggctcaggt 521
                ||||||||||||| ||||||||||||| || ||||||| |||| |||||
Sbjct: 24469050 atcacaaacagttgctccaggcctctggggataggtgactggcccaggt 24469098



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                  
Query: 255      tggtcaaacttgcactggacgccaaacttgcatgcgcccgtcttcatgta 304
                ||||| ||||||||||| |  |||||||||||  |||| |||||||||||
Sbjct: 24468378 tggtcgaacttgcactgcataccaaacttgcacacgccagtcttcatgta 24468427
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>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0686E09
          Length = 156425

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                         
Query: 402   gcagaccgatcaactggatggtgaaacttgcatctttcagaaaatttacaaaatcctgtc 461
             ||||| ||||||| ||| ||||||||||||||||  |||| ||| || ||||||||||||
Sbjct: 49254 gcagaacgatcaattgggtggtgaaacttgcatcggtcagcaaacttgcaaaatcctgtc 49313

                
Query: 462   ttc 464
             |||
Sbjct: 49314 ttc 49316



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 473   atcacaaacagtttctccaggcctctgagggtaggtgattggctcaggt 521
             ||||||||||||| ||||||||||||| || ||||||| |||| |||||
Sbjct: 49434 atcacaaacagttgctccaggcctctggggataggtgactggcccaggt 49482



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 255   tggtcaaacttgcactggacgccaaacttgcatgcgcccgtcttcatgta 304
             ||||| ||||||||||| |  |||||||||||  |||| |||||||||||
Sbjct: 48762 tggtcgaacttgcactgcataccaaacttgcacacgccagtcttcatgta 48811
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>ref|XM_421321.1| PREDICTED: Gallus gallus similar to hypothetical protein FLJ20707
            isoform 1 (LOC423411), mRNA
          Length = 4554

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 434  tctttcagaaaatttacaaaatcctgtctt 463
            ||||||||||||||||| || |||||||||
Sbjct: 2321 tctttcagaaaatttaccaattcctgtctt 2292
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 95       tatacacattctgttggagatgctct 120
                ||||||||||||||||| ||||||||
Sbjct: 16091496 tatacacattctgttggtgatgctct 16091521
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>gb|AC087549.2|AC087549 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0039C14,
              complete sequence
          Length = 135098

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 95     tatacacattctgttggagatgctct 120
              ||||||||||||||||| ||||||||
Sbjct: 106601 tatacacattctgttggtgatgctct 106626
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 95       tatacacattctgttggagatgctct 120
                ||||||||||||||||| ||||||||
Sbjct: 16099737 tatacacattctgttggtgatgctct 16099762
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>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
              SNF2P genes, complete cds; nucellin pseudogene, complete
              sequence; putative transposase, phosphatidylinositol
              phosphatidylcholine transfer protein sec14 cytosolic-like
              protein, and phytochrome P450-like protein genes, complete
              cds; and unknown genes
          Length = 438828

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 92     aaatatacacattctgttggagatgctct 120
              |||||||||||| || |||||||||||||
Sbjct: 430283 aaatatacacatgctattggagatgctct 430255
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>gb|AC131695.4| Mus musculus BAC clone RP23-396F8 from chromosome 6, complete sequence
          Length = 199679

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 105    ctgttggagatgctctgatgacaga 129
              ||||||| |||||||||||||||||
Sbjct: 173314 ctgttggtgatgctctgatgacaga 173290
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>gb|AC156164.2| Mus musculus BAC clone RP24-75M13 from chromosome 9, complete sequence
          Length = 183015

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 76    aaacatatagacatccaaatatacacatt 104
             |||||||||||||  ||||||||||||||
Sbjct: 82104 aaacatatagacaagcaaatatacacatt 82076
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>gb|AC109585.4| Homo sapiens chromosome 3 clone RP11-802J21, complete sequence
          Length = 213077

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 357    atcacaggttgctgagatgac 377
              |||||||||||||||||||||
Sbjct: 154983 atcacaggttgctgagatgac 154963
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>gb|AC127322.4| Mus musculus BAC clone RP23-238A8 from chromosome 6, complete sequence
          Length = 179698

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 105    ctgttggagatgctctgatgacaga 129
              ||||||| |||||||||||||||||
Sbjct: 178731 ctgttggtgatgctctgatgacaga 178755
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>gb|AC096916.2| Homo sapiens chromosome 3 clone RP11-92I24, complete sequence
          Length = 163539

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 357   atcacaggttgctgagatgac 377
             |||||||||||||||||||||
Sbjct: 19752 atcacaggttgctgagatgac 19732
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>emb|CR339049.6| Zebrafish DNA sequence from clone CH211-165D12 in linkage group 3,
             complete sequence
          Length = 126083

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 107   gttggagatgctctgatgaca 127
             |||||||||||||||||||||
Sbjct: 19051 gttggagatgctctgatgaca 19071
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>gb|AC114487.2| Homo sapiens chromosome 1 clone RP4-706L14, complete sequence
          Length = 160957

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 69    tctatataaacatatagacat 89
             |||||||||||||||||||||
Sbjct: 69378 tctatataaacatatagacat 69398
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>gb|AC102372.8| Mus musculus chromosome 5, clone RP23-262J12, complete sequence
          Length = 212548

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 324    tcctctctccttggaaagcca 344
              |||||||||||||||||||||
Sbjct: 141163 tcctctctccttggaaagcca 141183
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>gb|AC133936.5| Mus musculus BAC clone RP24-399H1 from chromosome 6, complete sequence
          Length = 177971

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 105   ctgttggagatgctctgatga 125
             |||||||||||||||||||||
Sbjct: 69299 ctgttggagatgctctgatga 69319
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>gb|AF246686.1| Pemphigus spyrothecae microsatellite 98PS23 sequence
          Length = 553

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 57  tttagaccattgtctatata 76
           ||||||||||||||||||||
Sbjct: 520 tttagaccattgtctatata 539
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>gb|AC157554.7| Mus musculus chromosome 15, clone RP24-324P21, complete sequence
          Length = 217353

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 72    atataaacatatagacatccaaatatacacat 103
             ||||||||| ||||| || |||||||||||||
Sbjct: 65004 atataaacacatagagatacaaatatacacat 64973
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>gb|AC167221.9| Mus musculus 10 BAC RP23-3P24 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 204841

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 436    tttcagaaaatttacaaaat 455
              ||||||||||||||||||||
Sbjct: 110820 tttcagaaaatttacaaaat 110839
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>gb|AC166082.11| Mus musculus 10 BAC RP23-150M2 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 170819

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 436    tttcagaaaatttacaaaat 455
              ||||||||||||||||||||
Sbjct: 123478 tttcagaaaatttacaaaat 123497
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>gb|AC140459.2| Mus musculus BAC clone RP24-129G21 from chromosome 16, complete sequence
          Length = 177790

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 88     atccaaatatacacattctgttggagat 115
              ||||| ||||||||||| ||||||||||
Sbjct: 168892 atccacatatacacattttgttggagat 168865
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>emb|Z68221.1|CEW09C2 Caenorhabditis elegans Cosmid W09C2, complete sequence
          Length = 30481

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 437   ttcagaaaatttacaaaatc 456
             ||||||||||||||||||||
Sbjct: 25882 ttcagaaaatttacaaaatc 25901
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>gb|AC107369.9| Mus musculus chromosome 15, clone RP23-368M2, complete sequence
          Length = 216082

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 57     tttagaccattgtctatataaacatata 84
              ||||||| ||||| ||||||||||||||
Sbjct: 199735 tttagacaattgtgtatataaacatata 199708
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>gb|AC138228.10| Mus musculus chromosome 17, clone RP23-304G12, complete sequence
          Length = 225739

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     tgttctgctgcaaaactgga 38
              ||||||||||||||||||||
Sbjct: 175665 tgttctgctgcaaaactgga 175646
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>gb|AC166654.1| Mus musculus BAC clone RP23-426B21 from chromosome 17, complete
             sequence
          Length = 185609

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    tgttctgctgcaaaactgga 38
             ||||||||||||||||||||
Sbjct: 33002 tgttctgctgcaaaactgga 32983
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>emb|AL035417.15|HS891H21 Human DNA sequence from clone RP5-891H21 on chromosome 1p32.2-34.2
             Contains a pseudogene similar to part of novel protein
             DKFZP434H132, the DMAP1 gene for DNA methyltransferase 1
             associated protein, a novel gene, the 3' end of the PRNPIP
             gene for prion protein interacting protein and a CpG
             island, complete sequence
          Length = 122948

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 473   atcacaaacagtttctccag 492
             ||||||||||||||||||||
Sbjct: 63644 atcacaaacagtttctccag 63625
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>emb|AL031657.5|HS28F12 Human DNA sequence from clone RP1-28F12 on chromosome 20q11.22-12
             Contains the 5' end of the PPP1R16B gene for protein
             phosphatase 1 regulatory (inhibitory) subunit 16B and a
             CpG island, complete sequence
          Length = 120630

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 471   aaatcacaaacagtttctccaggc 494
             |||| |||||||||||||||||||
Sbjct: 47859 aaattacaaacagtttctccaggc 47836
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>gb|AC113349.2| Homo sapiens chromosome 5 clone CTD-2544H17, complete sequence
          Length = 163806

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   ctgatgacagaaacagactc 138
             ||||||||||||||||||||
Sbjct: 92237 ctgatgacagaaacagactc 92218
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>gb|AC104083.3| Homo sapiens BAC clone RP11-588K22 from 4, complete sequence
          Length = 196537

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 436    tttcagaaaatttacaaaat 455
              ||||||||||||||||||||
Sbjct: 170096 tttcagaaaatttacaaaat 170115
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>gb|AF316419.1|AF316419 Lolium perenne terminal flower 1-like protein (TFL1) mRNA, complete
           cds
          Length = 954

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 594 gggacaacagatgcttcatt 613
           ||||||||||||||||||||
Sbjct: 361 gggacaacagatgcttcatt 380
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>gb|AC008436.5|AC008436 Homo sapiens chromosome 5 clone CTC-327B12, complete sequence
          Length = 118533

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   ctgatgacagaaacagactc 138
             ||||||||||||||||||||
Sbjct: 51982 ctgatgacagaaacagactc 52001
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>gb|AC005043.2|AC005043 Homo sapiens BAC clone RP11-576N21 from 1, complete sequence
          Length = 163417

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 473   atcacaaacagtttctccag 492
             ||||||||||||||||||||
Sbjct: 84383 atcacaaacagtttctccag 84364
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>gb|AC087879.8| Homo sapiens 12q BAC RP11-166B14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 165693

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 79    catatagacatccaaatatacaca 102
             ||||||||||| ||||||||||||
Sbjct: 41850 catatagacatacaaatatacaca 41873
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>gb|AC146595.2| Mus musculus BAC clone RP24-164G18 from chromosome 17, complete
             sequence
          Length = 132103

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 437   ttcagaaaatttacaaaatc 456
             ||||||||||||||||||||
Sbjct: 55058 ttcagaaaatttacaaaatc 55077
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>gb|AF233751.1|AF233746S6 Homo sapiens soluble guanylate cyclase large subunit gene, intron 6
          Length = 3014

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 436 tttcagaaaatttacaaaat 455
           ||||||||||||||||||||
Sbjct: 346 tttcagaaaatttacaaaat 365
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>gb|AC123634.10| Mus musculus chromosome 3, clone RP24-434E24, complete sequence
          Length = 176948

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 311   gcaggcctcagcatcctctctcct 334
             |||| |||||||||||||||||||
Sbjct: 75407 gcagacctcagcatcctctctcct 75384
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>emb|AL122125.4|CNS01DT0 Human chromosome 14 DNA sequence BAC R-102G14 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 188849

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 174    tccaggacataactcagtcc 193
              ||||||||||||||||||||
Sbjct: 150934 tccaggacataactcagtcc 150915
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>emb|AL669920.15| Mouse DNA sequence from clone RP23-263C23 on chromosome 11, complete
             sequence
          Length = 216776

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 592   cagggacaacagatgcttca 611
             ||||||||||||||||||||
Sbjct: 46635 cagggacaacagatgcttca 46616
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>emb|AL929144.10| Mouse DNA sequence from clone RP23-441D24 on chromosome 2, complete
            sequence
          Length = 82369

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 667  tcttaatataaaatgagcaatcaa 690
            |||||||||||||| |||||||||
Sbjct: 5699 tcttaatataaaatcagcaatcaa 5676
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>emb|AL603843.15| Mouse DNA sequence from clone RP23-412D17 on chromosome 15, complete
              sequence
          Length = 203649

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 72     atataaacatatagacatccaaatatacacat 103
              ||||||||| ||||| || |||||||||||||
Sbjct: 192947 atataaacacatagagatacaaatatacacat 192916
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>dbj|AP003179.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-713B9, complete
             sequence
          Length = 112998

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 322   catcctctctccttggaaag 341
             ||||||||||||||||||||
Sbjct: 41279 catcctctctccttggaaag 41298


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,900,108
Number of Sequences: 3902068
Number of extensions: 6900108
Number of successful extensions: 136927
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 136662
Number of HSP's gapped (non-prelim): 262
length of query: 697
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 674
effective length of database: 17,143,297,704
effective search space: 11554582652496
effective search space used: 11554582652496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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