>RAE1L_ARATH (Q38942) Rae1-like protein At1g80670|
          Length = 349

 Score = 92.4 bits (228), Expect = 6e-19
 Identities = 41/54 (75%), Positives = 48/54 (88%), Gaps = 1/54 (1%)
 Frame = -3

Query: 498 FNNDGSIFAYGVCYDWSRGAENHNPANAKTSIYLHSPQEAEVKGKPRI-ATGRK 340
           FN+DGSI+AY  CYDWS+GAENHNPA AK+SI+LH PQE+EVK KPR+ ATGRK
Sbjct: 296 FNHDGSIYAYAACYDWSKGAENHNPATAKSSIFLHLPQESEVKAKPRVGATGRK 349

>RAE1_SCHPO (P41838) Poly(A)+ RNA export protein|
          Length = 352

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 20/47 (42%), Positives = 26/47 (55%)
 Frame = -3

Query: 498 FNNDGSIFAYGVCYDWSRGAENHNPANAKTSIYLHSPQEAEVKGKPR 358
           FN  G IFAY + YDWS+G    N A     I LH   + E+K +P+
Sbjct: 304 FNRTGDIFAYAISYDWSKG-YTFNNAQLPNKIMLHPVPQDEIKPRPK 349

>RAE1L_HUMAN (P78406) mRNA-associated protein mrnp 41 (Rae1 protein homolog)|
          Length = 368

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 19/39 (48%), Positives = 26/39 (66%)
 Frame = -3

Query: 498 FNNDGSIFAYGVCYDWSRGAENHNPANAKTSIYLHSPQE 382
           FN++G+IFAY   YDWS+G E +NP   K  I+L +  E
Sbjct: 323 FNHNGNIFAYASSYDWSKGHEFYNP-QKKNYIFLRNAAE 360

>GLE2_YEAST (P40066) Nucleoporin GLE2 (Nuclear pore protein GLE2) (poly(A) RNA|
           export protein RAE1)
          Length = 365

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 19/47 (40%), Positives = 28/47 (59%)
 Frame = -3

Query: 498 FNNDGSIFAYGVCYDWSRGAENHNPANAKTSIYLHSPQEAEVKGKPR 358
           FN +GS+FAY + YDW +G   + P +    I LH+  + EVK K +
Sbjct: 319 FNRNGSVFAYALSYDWHQGHMGNRP-DYPNVIRLHATTDEEVKEKKK 364

>PDAT_YEAST (P40345) Phospholipid:diacylglycerol acyltransferase (EC 2.3.1.158)|
           (PDAT)
          Length = 661

 Score = 33.1 bits (74), Expect = 0.43
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
 Frame = -3

Query: 489 DGSI--FAYGVCYDWSRGAENHNPANAKTSI--YLHSPQEAEVKGKPRIA 352
           DG++   A+ +C+ W++GA  +NPA    +I    H P   +++G  + A
Sbjct: 567 DGTVPLVAHSMCHKWAQGASPYNPAGINVTIVEMKHQPDRFDIRGGAKSA 616

>NPP17_CAEEL (Q93454) Nucleoporin-17 (Nuclear pore complex protein 17) (CeRAE1)|
          Length = 373

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 495 NNDGSIFAYGVCYDWSRGAENHNPANAKTSIY 400
           ++ G+   Y + YDWSRG E +    +K  I+
Sbjct: 329 HSSGAFLVYALGYDWSRGHEGNTQPGSKIVIH 360

>RSNL2_MOUSE (Q8CI96) Restin-like protein 2|
          Length = 704

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 72  TDLTIYHNTITRGNHSFGQLCNTETAMRYDLRLSNLSLAAGTR 200
           TD+T+ H T   G H  G +   ETA+++  +L +L   A  R
Sbjct: 106 TDMTLLHYTCKSGAHGIGDI---ETAVKFAAQLIDLGADASLR 145


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,979,468
Number of Sequences: 219361
Number of extensions: 1751420
Number of successful extensions: 4326
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4325
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)