ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63j15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NPC2_CANAL (Q5A8A2) Phosphatidylglycerol/phosphatidylinositol tr... 45 1e-04
2NPC2_ASPOR (O94183) Phosphatidylglycerol/phosphatidylinositol tr... 44 2e-04
3NPC2_ASPFU (Q4X136) Phosphatidylglycerol/phosphatidylinositol tr... 41 0.001
4NPC2_DEBHA (Q6BV42) Phosphatidylglycerol/phosphatidylinositol tr... 40 0.002
5NPC2_MAGGR (Q52FS9) Phosphatidylglycerol/phosphatidylinositol tr... 40 0.003
6NPC2_NEUCR (Q7RZ85) Phosphatidylglycerol/phosphatidylinositol tr... 40 0.004
7NPC2_YARLI (Q6CHU5) Phosphatidylglycerol/phosphatidylinositol tr... 39 0.008
8NPC2_KLULA (Q6CNE0) Phosphatidylglycerol/phosphatidylinositol tr... 39 0.008
9NPC2_ASHGO (Q756Q3) Phosphatidylglycerol/phosphatidylinositol tr... 38 0.014
10NPC2_USTMA (Q4P580) Phosphatidylglycerol/phosphatidylinositol tr... 37 0.024
11NPC2_SCHPO (Q9C0X9) Phosphatidylglycerol/phosphatidylinositol tr... 36 0.040
12NPC2_EMENI (Q5B0Q1) Phosphatidylglycerol/phosphatidylinositol tr... 36 0.040
13NPC2_YEAST (Q12408) Phosphatidylglycerol/phosphatidylinositol tr... 32 0.58
14SSS_SALOF (O81193) (+)-sabinene synthase, chloroplast precursor ... 31 1.3
15NPC2_CANGA (Q6FNB1) Phosphatidylglycerol/phosphatidylinositol tr... 31 1.3
16PLSC_PHYPO (P19203) Plasmin C precursor 29 4.9
17TDRD7_MOUSE (Q8K1H1) Tudor domain-containing protein 7 (Tudor re... 29 6.4
18OSBP1_HUMAN (P22059) Oxysterol-binding protein 1 29 6.4
19GPC5_HUMAN (P78333) Glypican-5 precursor 29 6.4
20OSBP1_RABIT (P16258) Oxysterol-binding protein 1 28 8.4
21ADEC_CLOAB (Q97KN0) Adenine deaminase (EC 3.5.4.2) (Adenase) (Ad... 28 8.4

>NPC2_CANAL (Q5A8A2) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 192

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
 Frame = -2

Query: 453 TFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDIC---TKTD--CPATSDFE-LSHSQ 295
           TF    + DK I EG  V ++V+Y    +  +T D+C    K D  CP  S  + ++ + 
Sbjct: 96  TFTAVGTLDKTIEEGAYVEVEVRYGFIKLIHQTYDLCEEIVKVDLQCPIKSGKQTITKNV 155

Query: 294 TLPSITPPGSYTIQMKMLGKHDEELSCIS 208
            +P   PPG Y +  +   K DE ++C++
Sbjct: 156 EIPEEVPPGKYLVVARAYTKDDEYITCLT 184



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>NPC2_ASPOR (O94183) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 175

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
 Frame = -2

Query: 441 SASTDKNITEGKLVI-DVKYWIFNVYSETDDIC-----TKTDCP-ATSDFELSHSQTLPS 283
           S +  + I +G  V+ +VKY +  +  +T D+C      +  CP    D  L+    LP 
Sbjct: 81  SGTLREKIEDGAYVLLEVKYGLITLVRQTADLCEQLVNVELKCPLGPGDMTLTKQVDLPK 140

Query: 282 ITPPGSYTIQMKMLGKHDEELSCISFGFSIGFLAP 178
             PPG YT+Q  +     E ++C+    +I F  P
Sbjct: 141 QIPPGKYTVQADVFNSDGEHITCLK-ALNIEFKGP 174



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>NPC2_ASPFU (Q4X136) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 175

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
 Frame = -2

Query: 453 TFKISASTD--KNITEGKLV-IDVKYWIFNVYSETDDICTKT-----DCPATS-DFELSH 301
           T  I+AS +  + + EG  V ++VKY +  +  +T D+C +      +CP    +  L+ 
Sbjct: 75  TLSINASGNLKERVEEGAYVALEVKYGLITLIKQTADLCEQIKNVDLECPLEKGEMTLTK 134

Query: 300 SQTLPSITPPGSYTIQMKMLGKHDEELSCI 211
              LPS  PPG Y +   +  K  ++++C+
Sbjct: 135 QVDLPSHIPPGKYNVHADVYTKDGKKITCL 164



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>NPC2_DEBHA (Q6BV42) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 196

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
 Frame = -2

Query: 453 TFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDIC---TKTD--CPATSDFELSHSQT 292
           TF       ++I +G  V +DV+Y    +  +T D+C   TK D  CP +   ++   + 
Sbjct: 100 TFVAKGVLSQDIEDGAYVEVDVRYGFIKLLHQTFDLCEEITKIDLECPISKGQQVIEKKV 159

Query: 291 -LPSITPPGSYTIQMKMLGKHDEELSCIS 208
            +P+  PPG Y +  +   K D  ++C+S
Sbjct: 160 EIPAEVPPGKYIVSARAYTKDDIFITCLS 188



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>NPC2_MAGGR (Q52FS9) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 178

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
 Frame = -2

Query: 447 KISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKT-----DCPATSD-FELSHSQTL 289
           K S    + I EG  + + VKY +  + +   D+C +      +CP      ++  S  L
Sbjct: 75  KASGDVTQKIEEGAYINLSVKYGLIRLINTKADLCEQIKNVDLECPIDEGKLDIVKSVDL 134

Query: 288 PSITPPGSYTIQMKMLGKHDEELSCIS 208
           P+  PPG YT+   +  K ++++SC++
Sbjct: 135 PNEIPPGKYTVFADVYTKDNKKISCLT 161



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>NPC2_NEUCR (Q7RZ85) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 177

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
 Frame = -2

Query: 453 TFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDIC-----TKTDCPATSD-FELSHSQ 295
           T + S    + I EG  V + VKY    + + + D+C      + +CP       ++ + 
Sbjct: 73  TIEASGIVKEAIEEGAYVNLQVKYGYIRLINTSADLCKEMKNVELECPIKKGRLSITKNV 132

Query: 294 TLPSITPPGSYTIQMKMLGKHDEELSCIS----FG-FSIGFL 184
            LP   PPG YT++  +    D+ ++C++    FG  ++GFL
Sbjct: 133 ELPKEIPPGKYTVEADVYNSDDKHITCLTATVFFGRKTLGFL 174



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>NPC2_YARLI (Q6CHU5) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 189

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
 Frame = -2

Query: 453 TFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKTD-----CPATS-DFELSHSQ 295
           T + S    +++ EG  + ++V+Y    + S+T D+C +++     CP  + D +L+   
Sbjct: 92  TIEASGYLYEDVEEGAYIEVEVRYGYIRLISQTLDLCEQSEQVDWSCPIKAGDLKLNKQI 151

Query: 294 TLPSITPPGSYTIQMKMLGKHDEELSCI 211
            LP+  PPG Y    +     D+ ++C+
Sbjct: 152 ELPNEIPPGKYVAVARAYTVDDDLITCL 179



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>NPC2_KLULA (Q6CNE0) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 173

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
 Frame = -2

Query: 420 ITEGKLV-IDVKYWIFNVYSETDDICTKTD--------CPATSD-FELSHSQTLPSITPP 271
           I EG  + I+V+     + S+T D+C + +        CP     +EL+    +PS  PP
Sbjct: 85  IEEGAYIDIEVRLGYIKLISQTYDLCEQLEENDIDGLKCPIEEGVYELNKIVEIPSEVPP 144

Query: 270 GSYTIQMKMLGKHDEELSCIS 208
           G Y++  +     DE+++C++
Sbjct: 145 GKYSVIARAYNVDDEQITCLT 165



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>NPC2_ASHGO (Q756Q3) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 213

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
 Frame = -2

Query: 405 LVIDVKYWIFNVYSETDDICTKTD-------CPATS-DFELSHSQTLPSITPPGSYTIQM 250
           + ++V+     + SET D+C + +       CP    ++ELS +  +P   PPG Y +  
Sbjct: 94  VTVEVRLGYIKLLSETFDLCKELEENDLGLQCPLEEGEYELSKTVEIPQQVPPGRYHVVA 153

Query: 249 KMLGKHDEELSCIS 208
           +     DE ++C++
Sbjct: 154 RAYTVDDEPITCLT 167



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>NPC2_USTMA (Q4P580) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 193

 Score = 37.0 bits (84), Expect = 0.024
 Identities = 20/98 (20%), Positives = 41/98 (41%), Gaps = 9/98 (9%)
 Frame = -2

Query: 453 TFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKT-------DCPATS-DFELSH 301
           T +   +    +++G    + VK  +  + +   D+C +         CP ++ ++EL H
Sbjct: 94  TVRAKGTVKDEVSDGTFADVIVKLGLIRLLARRFDVCEQARESNADLQCPLSAGEYELEH 153

Query: 300 SQTLPSITPPGSYTIQMKMLGKHDEELSCISFGFSIGF 187
           +  LP   PPG + + +    +    L C+      GF
Sbjct: 154 TVALPREIPPGKFNVHITGENQDGSNLLCLDLSIQFGF 191



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>NPC2_SCHPO (Q9C0X9) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 188

 Score = 36.2 bits (82), Expect = 0.040
 Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
 Frame = -2

Query: 453 TFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKT------DCPATSDFELSHSQ 295
           T +   +    +  G  V I VKY    + +E  DIC K       +CP         + 
Sbjct: 82  TIETEINVGTTVLNGSYVDIQVKYGFVRIVNERLDICDKAYELAAVECPVEPGIITKQAT 141

Query: 294 -TLPSITPPGSYTIQMKMLGKHDEELSCIS-------FGFSI 193
            +LP   PPG Y +         E+L+C+S       FGF +
Sbjct: 142 ISLPWAIPPGRYHVLATAYNADGEQLTCVSASVSFSHFGFQL 183



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>NPC2_EMENI (Q5B0Q1) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 169

 Score = 36.2 bits (82), Expect = 0.040
 Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
 Frame = -2

Query: 405 LVIDVKYWIFNVYSETDDICTKT-----DCPATSD-FELSHSQTLPSITPPGSYTIQMKM 244
           +V++VKY +  +  +T D+C +       CP       L+    LPS  P G YT+   +
Sbjct: 92  VVLEVKYGLITLLRDTADLCAQLTNVDLQCPLEEGPMVLTKEVDLPSQIPRGRYTVHADV 151

Query: 243 LGKHDEELSCI 211
             K ++ ++C+
Sbjct: 152 YTKDNKRITCL 162



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>NPC2_YEAST (Q12408) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP) (NPC2 homolog)
          Length = 173

 Score = 32.3 bits (72), Expect = 0.58
 Identities = 18/92 (19%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
 Frame = -2

Query: 453 TFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKTD--------CPAT-SDFELS 304
           T   +    + I EG  + ++V+     + S+T D+C   +        CP    ++ + 
Sbjct: 74  TISANGEVFETIEEGAYIDVEVRLGYIRLLSQTFDLCETLEDNDIEGLSCPIEPGEYNIK 133

Query: 303 HSQTLPSITPPGSYTIQMKMLGKHDEELSCIS 208
               +P   PPG Y +  +   + D+ ++C++
Sbjct: 134 KIVEIPGEVPPGKYVVVARAYTEKDDLITCLT 165



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>SSS_SALOF (O81193) (+)-sabinene synthase, chloroplast precursor (EC 4.2.3.11)|
           (SSS)
          Length = 590

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 429 DKNITEGKLVIDVKYWIFNVYSETDDICTKTDCPATSD 316
           D N +E + V  VK+ I   + E + + T +DCP T D
Sbjct: 511 DTNASEREAVEHVKFLIREAWKEMNTVTTASDCPFTDD 548



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>NPC2_CANGA (Q6FNB1) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 185

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
 Frame = -2

Query: 447 KISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKTD--------CPATSDF--ELSH 301
           K S    + I EG  V ++V+     + ++T D+C   +        CP        LS 
Sbjct: 85  KASGEIFETIEEGAYVDVEVRLGYIKLLTQTYDLCEILEDNDVDGLTCPIKKGKYDNLSK 144

Query: 300 SQTLPSITPPGSYTIQMKMLGKHDEELSCIS 208
              +P   PPG Y +  +     D+ ++CI+
Sbjct: 145 DVDIPQEVPPGKYLVTARAYTNDDDLITCIT 175



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>PLSC_PHYPO (P19203) Plasmin C precursor|
          Length = 150

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -2

Query: 369 YSETDDICTKTDCPATSDFELSHSQTLPSITPPGSYTIQMKMLGKHD 229
           Y++T   CT   C   +D++LS  QT  S  P    T+++     HD
Sbjct: 39  YTQTAS-CTPIPCTKNTDYQLSILQTCVSAIPQTKGTLEISSYPSHD 84



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>TDRD7_MOUSE (Q8K1H1) Tudor domain-containing protein 7 (Tudor repeat associator|
           with PCTAIRE 2) (Trap)
          Length = 1086

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -2

Query: 333 CPATSDFELSHSQTLPSITPPGSYTIQMKMLGKHDEEL 220
           CP   +  L+ +   P+ITPP SYT +M  +    +E+
Sbjct: 196 CPTEVNDNLNQTVEKPNITPPASYTNKMDEVQNRIKEI 233



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>OSBP1_HUMAN (P22059) Oxysterol-binding protein 1|
          Length = 807

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 26/88 (29%), Positives = 36/88 (40%)
 Frame = -2

Query: 453 TFKISASTDKNITEGKLVIDVKYWIFNVYSETDDICTKTDCPATSDFELSHSQTLPSITP 274
           T+K   +T  NI  GKL ID    I  V  +T D C     P +        +    +T 
Sbjct: 574 TWKKVTTTVHNIIVGKLWIDQSGEIDIVNHKTGDKCNLKFVPYSYFSRDVARKVTGEVTD 633

Query: 273 PGSYTIQMKMLGKHDEELSCISFGFSIG 190
           P S  +   +LG  DE++ C      IG
Sbjct: 634 P-SGKVHFALLGTWDEKMECFKVQPVIG 660



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>GPC5_HUMAN (P78333) Glypican-5 precursor|
          Length = 572

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 22/66 (33%), Positives = 32/66 (48%)
 Frame = -1

Query: 334 LPGNF*FRAISLANLTINHSTRFLHHSDEDARKA**GIELHLLRVQHWLPCPGRPELKAC 155
           LP     +A++L    IN +T +LH S E +R         LL++Q+   C G    K C
Sbjct: 220 LPSRTFLQALNLGIEVIN-TTDYLHFSKECSRA--------LLKMQYCPHCQGLALTKPC 270

Query: 154 IGCMLN 137
           +G  LN
Sbjct: 271 MGYCLN 276



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>OSBP1_RABIT (P16258) Oxysterol-binding protein 1|
          Length = 809

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 24/80 (30%), Positives = 34/80 (42%)
 Frame = -2

Query: 453 TFKISASTDKNITEGKLVIDVKYWIFNVYSETDDICTKTDCPATSDFELSHSQTLPSITP 274
           T+K   +T  NI  GKL ID    I  V  +T D C     P +        +    +T 
Sbjct: 576 TWKKVTTTVHNIIVGKLWIDQSGEIDIVNHKTGDKCNLKFVPYSYFSRDVARKVTGEVTD 635

Query: 273 PGSYTIQMKMLGKHDEELSC 214
           P S  +   +LG  DE++ C
Sbjct: 636 P-SGKVHFALLGTWDEKMDC 654



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>ADEC_CLOAB (Q97KN0) Adenine deaminase (EC 3.5.4.2) (Adenase) (Adenine aminase)|
          Length = 570

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
 Frame = +2

Query: 158 CLQLRATGARKPMLNPKEMQLNSSSCFPSIFI*MV*EPGGVI--DGKVCE*DSSKSEVAG 331
           C +L   GA  P      + L        + + MV + G V+  D K  +   SKS++  
Sbjct: 309 CYKLERVGAIAPSYKADLVVLED---LKDVKVNMVIKSGEVVFKDNKHLKDMGSKSDITK 365

Query: 332 QSVFVQMSSVSE*TLKIQYLTSITSFPSVMFLSVEAEILK 451
            S  V +  VSE  L+++  T + S  SV   S+  + +K
Sbjct: 366 VSNTVNIKKVSEENLELKLDTDVCSIISVALNSISTKNVK 405


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,136,658
Number of Sequences: 219361
Number of extensions: 1310836
Number of successful extensions: 3452
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3447
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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