Clone Name | rbah63j15 |
---|---|
Clone Library Name | barley_pub |
>NPC2_CANAL (Q5A8A2) Phosphatidylglycerol/phosphatidylinositol transfer protein| precursor (PG/PI-TP) Length = 192 Score = 44.7 bits (104), Expect = 1e-04 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 7/89 (7%) Frame = -2 Query: 453 TFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDIC---TKTD--CPATSDFE-LSHSQ 295 TF + DK I EG V ++V+Y + +T D+C K D CP S + ++ + Sbjct: 96 TFTAVGTLDKTIEEGAYVEVEVRYGFIKLIHQTYDLCEEIVKVDLQCPIKSGKQTITKNV 155 Query: 294 TLPSITPPGSYTIQMKMLGKHDEELSCIS 208 +P PPG Y + + K DE ++C++ Sbjct: 156 EIPEEVPPGKYLVVARAYTKDDEYITCLT 184
>NPC2_ASPOR (O94183) Phosphatidylglycerol/phosphatidylinositol transfer protein| precursor (PG/PI-TP) Length = 175 Score = 43.9 bits (102), Expect = 2e-04 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 7/95 (7%) Frame = -2 Query: 441 SASTDKNITEGKLVI-DVKYWIFNVYSETDDIC-----TKTDCP-ATSDFELSHSQTLPS 283 S + + I +G V+ +VKY + + +T D+C + CP D L+ LP Sbjct: 81 SGTLREKIEDGAYVLLEVKYGLITLVRQTADLCEQLVNVELKCPLGPGDMTLTKQVDLPK 140 Query: 282 ITPPGSYTIQMKMLGKHDEELSCISFGFSIGFLAP 178 PPG YT+Q + E ++C+ +I F P Sbjct: 141 QIPPGKYTVQADVFNSDGEHITCLK-ALNIEFKGP 174
>NPC2_ASPFU (Q4X136) Phosphatidylglycerol/phosphatidylinositol transfer protein| precursor (PG/PI-TP) Length = 175 Score = 41.2 bits (95), Expect = 0.001 Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 9/90 (10%) Frame = -2 Query: 453 TFKISASTD--KNITEGKLV-IDVKYWIFNVYSETDDICTKT-----DCPATS-DFELSH 301 T I+AS + + + EG V ++VKY + + +T D+C + +CP + L+ Sbjct: 75 TLSINASGNLKERVEEGAYVALEVKYGLITLIKQTADLCEQIKNVDLECPLEKGEMTLTK 134 Query: 300 SQTLPSITPPGSYTIQMKMLGKHDEELSCI 211 LPS PPG Y + + K ++++C+ Sbjct: 135 QVDLPSHIPPGKYNVHADVYTKDGKKITCL 164
>NPC2_DEBHA (Q6BV42) Phosphatidylglycerol/phosphatidylinositol transfer protein| precursor (PG/PI-TP) Length = 196 Score = 40.4 bits (93), Expect = 0.002 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 7/89 (7%) Frame = -2 Query: 453 TFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDIC---TKTD--CPATSDFELSHSQT 292 TF ++I +G V +DV+Y + +T D+C TK D CP + ++ + Sbjct: 100 TFVAKGVLSQDIEDGAYVEVDVRYGFIKLLHQTFDLCEEITKIDLECPISKGQQVIEKKV 159 Query: 291 -LPSITPPGSYTIQMKMLGKHDEELSCIS 208 +P+ PPG Y + + K D ++C+S Sbjct: 160 EIPAEVPPGKYIVSARAYTKDDIFITCLS 188
>NPC2_MAGGR (Q52FS9) Phosphatidylglycerol/phosphatidylinositol transfer protein| precursor (PG/PI-TP) Length = 178 Score = 40.0 bits (92), Expect = 0.003 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 7/87 (8%) Frame = -2 Query: 447 KISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKT-----DCPATSD-FELSHSQTL 289 K S + I EG + + VKY + + + D+C + +CP ++ S L Sbjct: 75 KASGDVTQKIEEGAYINLSVKYGLIRLINTKADLCEQIKNVDLECPIDEGKLDIVKSVDL 134 Query: 288 PSITPPGSYTIQMKMLGKHDEELSCIS 208 P+ PPG YT+ + K ++++SC++ Sbjct: 135 PNEIPPGKYTVFADVYTKDNKKISCLT 161
>NPC2_NEUCR (Q7RZ85) Phosphatidylglycerol/phosphatidylinositol transfer protein| precursor (PG/PI-TP) Length = 177 Score = 39.7 bits (91), Expect = 0.004 Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 12/102 (11%) Frame = -2 Query: 453 TFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDIC-----TKTDCPATSD-FELSHSQ 295 T + S + I EG V + VKY + + + D+C + +CP ++ + Sbjct: 73 TIEASGIVKEAIEEGAYVNLQVKYGYIRLINTSADLCKEMKNVELECPIKKGRLSITKNV 132 Query: 294 TLPSITPPGSYTIQMKMLGKHDEELSCIS----FG-FSIGFL 184 LP PPG YT++ + D+ ++C++ FG ++GFL Sbjct: 133 ELPKEIPPGKYTVEADVYNSDDKHITCLTATVFFGRKTLGFL 174
>NPC2_YARLI (Q6CHU5) Phosphatidylglycerol/phosphatidylinositol transfer protein| precursor (PG/PI-TP) Length = 189 Score = 38.5 bits (88), Expect = 0.008 Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 7/88 (7%) Frame = -2 Query: 453 TFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKTD-----CPATS-DFELSHSQ 295 T + S +++ EG + ++V+Y + S+T D+C +++ CP + D +L+ Sbjct: 92 TIEASGYLYEDVEEGAYIEVEVRYGYIRLISQTLDLCEQSEQVDWSCPIKAGDLKLNKQI 151 Query: 294 TLPSITPPGSYTIQMKMLGKHDEELSCI 211 LP+ PPG Y + D+ ++C+ Sbjct: 152 ELPNEIPPGKYVAVARAYTVDDDLITCL 179
>NPC2_KLULA (Q6CNE0) Phosphatidylglycerol/phosphatidylinositol transfer protein| precursor (PG/PI-TP) Length = 173 Score = 38.5 bits (88), Expect = 0.008 Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 10/81 (12%) Frame = -2 Query: 420 ITEGKLV-IDVKYWIFNVYSETDDICTKTD--------CPATSD-FELSHSQTLPSITPP 271 I EG + I+V+ + S+T D+C + + CP +EL+ +PS PP Sbjct: 85 IEEGAYIDIEVRLGYIKLISQTYDLCEQLEENDIDGLKCPIEEGVYELNKIVEIPSEVPP 144 Query: 270 GSYTIQMKMLGKHDEELSCIS 208 G Y++ + DE+++C++ Sbjct: 145 GKYSVIARAYNVDDEQITCLT 165
>NPC2_ASHGO (Q756Q3) Phosphatidylglycerol/phosphatidylinositol transfer protein| precursor (PG/PI-TP) Length = 213 Score = 37.7 bits (86), Expect = 0.014 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 8/74 (10%) Frame = -2 Query: 405 LVIDVKYWIFNVYSETDDICTKTD-------CPATS-DFELSHSQTLPSITPPGSYTIQM 250 + ++V+ + SET D+C + + CP ++ELS + +P PPG Y + Sbjct: 94 VTVEVRLGYIKLLSETFDLCKELEENDLGLQCPLEEGEYELSKTVEIPQQVPPGRYHVVA 153 Query: 249 KMLGKHDEELSCIS 208 + DE ++C++ Sbjct: 154 RAYTVDDEPITCLT 167
>NPC2_USTMA (Q4P580) Phosphatidylglycerol/phosphatidylinositol transfer protein| precursor (PG/PI-TP) Length = 193 Score = 37.0 bits (84), Expect = 0.024 Identities = 20/98 (20%), Positives = 41/98 (41%), Gaps = 9/98 (9%) Frame = -2 Query: 453 TFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKT-------DCPATS-DFELSH 301 T + + +++G + VK + + + D+C + CP ++ ++EL H Sbjct: 94 TVRAKGTVKDEVSDGTFADVIVKLGLIRLLARRFDVCEQARESNADLQCPLSAGEYELEH 153 Query: 300 SQTLPSITPPGSYTIQMKMLGKHDEELSCISFGFSIGF 187 + LP PPG + + + + L C+ GF Sbjct: 154 TVALPREIPPGKFNVHITGENQDGSNLLCLDLSIQFGF 191
>NPC2_SCHPO (Q9C0X9) Phosphatidylglycerol/phosphatidylinositol transfer protein| precursor (PG/PI-TP) Length = 188 Score = 36.2 bits (82), Expect = 0.040 Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 15/102 (14%) Frame = -2 Query: 453 TFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKT------DCPATSDFELSHSQ 295 T + + + G V I VKY + +E DIC K +CP + Sbjct: 82 TIETEINVGTTVLNGSYVDIQVKYGFVRIVNERLDICDKAYELAAVECPVEPGIITKQAT 141 Query: 294 -TLPSITPPGSYTIQMKMLGKHDEELSCIS-------FGFSI 193 +LP PPG Y + E+L+C+S FGF + Sbjct: 142 ISLPWAIPPGRYHVLATAYNADGEQLTCVSASVSFSHFGFQL 183
>NPC2_EMENI (Q5B0Q1) Phosphatidylglycerol/phosphatidylinositol transfer protein| precursor (PG/PI-TP) Length = 169 Score = 36.2 bits (82), Expect = 0.040 Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 6/71 (8%) Frame = -2 Query: 405 LVIDVKYWIFNVYSETDDICTKT-----DCPATSD-FELSHSQTLPSITPPGSYTIQMKM 244 +V++VKY + + +T D+C + CP L+ LPS P G YT+ + Sbjct: 92 VVLEVKYGLITLLRDTADLCAQLTNVDLQCPLEEGPMVLTKEVDLPSQIPRGRYTVHADV 151 Query: 243 LGKHDEELSCI 211 K ++ ++C+ Sbjct: 152 YTKDNKRITCL 162
>NPC2_YEAST (Q12408) Phosphatidylglycerol/phosphatidylinositol transfer protein| precursor (PG/PI-TP) (NPC2 homolog) Length = 173 Score = 32.3 bits (72), Expect = 0.58 Identities = 18/92 (19%), Positives = 40/92 (43%), Gaps = 10/92 (10%) Frame = -2 Query: 453 TFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKTD--------CPAT-SDFELS 304 T + + I EG + ++V+ + S+T D+C + CP ++ + Sbjct: 74 TISANGEVFETIEEGAYIDVEVRLGYIRLLSQTFDLCETLEDNDIEGLSCPIEPGEYNIK 133 Query: 303 HSQTLPSITPPGSYTIQMKMLGKHDEELSCIS 208 +P PPG Y + + + D+ ++C++ Sbjct: 134 KIVEIPGEVPPGKYVVVARAYTEKDDLITCLT 165
>SSS_SALOF (O81193) (+)-sabinene synthase, chloroplast precursor (EC 4.2.3.11)| (SSS) Length = 590 Score = 31.2 bits (69), Expect = 1.3 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = -2 Query: 429 DKNITEGKLVIDVKYWIFNVYSETDDICTKTDCPATSD 316 D N +E + V VK+ I + E + + T +DCP T D Sbjct: 511 DTNASEREAVEHVKFLIREAWKEMNTVTTASDCPFTDD 548
>NPC2_CANGA (Q6FNB1) Phosphatidylglycerol/phosphatidylinositol transfer protein| precursor (PG/PI-TP) Length = 185 Score = 31.2 bits (69), Expect = 1.3 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 11/91 (12%) Frame = -2 Query: 447 KISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKTD--------CPATSDF--ELSH 301 K S + I EG V ++V+ + ++T D+C + CP LS Sbjct: 85 KASGEIFETIEEGAYVDVEVRLGYIKLLTQTYDLCEILEDNDVDGLTCPIKKGKYDNLSK 144 Query: 300 SQTLPSITPPGSYTIQMKMLGKHDEELSCIS 208 +P PPG Y + + D+ ++CI+ Sbjct: 145 DVDIPQEVPPGKYLVTARAYTNDDDLITCIT 175
>PLSC_PHYPO (P19203) Plasmin C precursor| Length = 150 Score = 29.3 bits (64), Expect = 4.9 Identities = 15/47 (31%), Positives = 23/47 (48%) Frame = -2 Query: 369 YSETDDICTKTDCPATSDFELSHSQTLPSITPPGSYTIQMKMLGKHD 229 Y++T CT C +D++LS QT S P T+++ HD Sbjct: 39 YTQTAS-CTPIPCTKNTDYQLSILQTCVSAIPQTKGTLEISSYPSHD 84
>TDRD7_MOUSE (Q8K1H1) Tudor domain-containing protein 7 (Tudor repeat associator| with PCTAIRE 2) (Trap) Length = 1086 Score = 28.9 bits (63), Expect = 6.4 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = -2 Query: 333 CPATSDFELSHSQTLPSITPPGSYTIQMKMLGKHDEEL 220 CP + L+ + P+ITPP SYT +M + +E+ Sbjct: 196 CPTEVNDNLNQTVEKPNITPPASYTNKMDEVQNRIKEI 233
>OSBP1_HUMAN (P22059) Oxysterol-binding protein 1| Length = 807 Score = 28.9 bits (63), Expect = 6.4 Identities = 26/88 (29%), Positives = 36/88 (40%) Frame = -2 Query: 453 TFKISASTDKNITEGKLVIDVKYWIFNVYSETDDICTKTDCPATSDFELSHSQTLPSITP 274 T+K +T NI GKL ID I V +T D C P + + +T Sbjct: 574 TWKKVTTTVHNIIVGKLWIDQSGEIDIVNHKTGDKCNLKFVPYSYFSRDVARKVTGEVTD 633 Query: 273 PGSYTIQMKMLGKHDEELSCISFGFSIG 190 P S + +LG DE++ C IG Sbjct: 634 P-SGKVHFALLGTWDEKMECFKVQPVIG 660
>GPC5_HUMAN (P78333) Glypican-5 precursor| Length = 572 Score = 28.9 bits (63), Expect = 6.4 Identities = 22/66 (33%), Positives = 32/66 (48%) Frame = -1 Query: 334 LPGNF*FRAISLANLTINHSTRFLHHSDEDARKA**GIELHLLRVQHWLPCPGRPELKAC 155 LP +A++L IN +T +LH S E +R LL++Q+ C G K C Sbjct: 220 LPSRTFLQALNLGIEVIN-TTDYLHFSKECSRA--------LLKMQYCPHCQGLALTKPC 270 Query: 154 IGCMLN 137 +G LN Sbjct: 271 MGYCLN 276
>OSBP1_RABIT (P16258) Oxysterol-binding protein 1| Length = 809 Score = 28.5 bits (62), Expect = 8.4 Identities = 24/80 (30%), Positives = 34/80 (42%) Frame = -2 Query: 453 TFKISASTDKNITEGKLVIDVKYWIFNVYSETDDICTKTDCPATSDFELSHSQTLPSITP 274 T+K +T NI GKL ID I V +T D C P + + +T Sbjct: 576 TWKKVTTTVHNIIVGKLWIDQSGEIDIVNHKTGDKCNLKFVPYSYFSRDVARKVTGEVTD 635 Query: 273 PGSYTIQMKMLGKHDEELSC 214 P S + +LG DE++ C Sbjct: 636 P-SGKVHFALLGTWDEKMDC 654
>ADEC_CLOAB (Q97KN0) Adenine deaminase (EC 3.5.4.2) (Adenase) (Adenine aminase)| Length = 570 Score = 28.5 bits (62), Expect = 8.4 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 2/100 (2%) Frame = +2 Query: 158 CLQLRATGARKPMLNPKEMQLNSSSCFPSIFI*MV*EPGGVI--DGKVCE*DSSKSEVAG 331 C +L GA P + L + + MV + G V+ D K + SKS++ Sbjct: 309 CYKLERVGAIAPSYKADLVVLED---LKDVKVNMVIKSGEVVFKDNKHLKDMGSKSDITK 365 Query: 332 QSVFVQMSSVSE*TLKIQYLTSITSFPSVMFLSVEAEILK 451 S V + VSE L+++ T + S SV S+ + +K Sbjct: 366 VSNTVNIKKVSEENLELKLDTDVCSIISVALNSISTKNVK 405 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,136,658 Number of Sequences: 219361 Number of extensions: 1310836 Number of successful extensions: 3452 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 3340 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3447 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)