ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63j14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible l... 595 e-167
2emb|AJ507212.1|HVU507212 Hordeum vulgare mRNA for lipoxygenase 2... 86 1e-13
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 80 8e-12
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 80 8e-12
5emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa... 80 8e-12
6emb|AJ270938.1|OSA270938 Oryza sativa mRNA for lipoxygenase (rci... 72 2e-09
7dbj|AK072241.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
8dbj|AK066737.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
9emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa... 72 2e-09
10ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA 54 5e-04
11ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA 54 5e-04
12gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 54 5e-04
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 54 5e-04
14emb|AJ507213.1|HVU507213 Hordeum vulgare mRNA for lipoxygenase 2... 54 5e-04
15gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual posit... 54 5e-04
16dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
17dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
18dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
19dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
20dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
21gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full... 52 0.002
22gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds 52 0.002
23gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, co... 52 0.002
24gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-... 52 0.002
25gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full ... 50 0.007
26gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 geno... 50 0.007
27gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome... 50 0.007
28ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.028
29gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRN... 48 0.028
30emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 48 0.028
31gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 48 0.028
32gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds 48 0.028
33dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.028
34gb|AY111869.1| Zea mays CL452_-8 mRNA sequence 48 0.028
35gb|AY103567.1| Zea mays PCO116252 mRNA sequence 48 0.028
36gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partia... 48 0.028
37gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds 48 0.028
38ref|XM_464447.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.44
39dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
40dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
41dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.44
42dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.44
43ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.7
44emb|AL596224.10| Human DNA sequence from clone RP11-26F12 on chr... 42 1.7
45gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 42 1.7
46gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complet... 42 1.7
47emb|CR354437.13| Zebrafish DNA sequence from clone DKEY-11D10 in... 40 6.9
48gb|BC077139.1| Danio rerio wu:fc51g12, mRNA (cDNA clone IMAGE:71... 40 6.9
49ref|XM_688015.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 6.9
50emb|BX324196.4| Zebrafish DNA sequence from clone CH211-142A12 i... 40 6.9
51gb|AY110522.1| Zea mays CL4677_2 mRNA sequence 40 6.9
52emb|CR753890.27| Zebrafish DNA sequence from clone CH211-207D8 i... 40 6.9
53gb|AY104322.1| Zea mays PCO093659 mRNA sequence 40 6.9 
>gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA,
            complete cds
          Length = 3054

 Score =  595 bits (300), Expect = e-167
 Identities = 314/320 (98%)
 Strand = Plus / Minus

                                                                        
Query: 189  cgtccgtgggatcaccgtccgacggcctgagcagcacatacggcaccatgccggcgccgt 248
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2854 cgtccgtgggatcaccgtccgacggcctgagcagcacatacggcaccatgccggcgccgt 2795

                                                                        
Query: 249  gtcggtttttccggtcggggtcgttgttccactcatncacctgctccacgatcttnctgg 308
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 2794 gtcggtttttccggtcggggtcgttgttccactcatccacctgctccacgatcttcctgg 2735

                                                                        
Query: 309  tgctctccttgaactcctcaaatgcctggntgatcaccccatnctttgtccatgccggct 368
            ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 2734 tgctctccttgaactcctcaaatgcctggttgatcaccccatcctttgtccatgccggct 2675

                                                                        
Query: 369  cttcgtgcgtgcccatgtactcctcatccgacgagtgcgtggacaagaggtccaagatgg 428
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2674 cttcgtgcgtgcccatgtactcctcatccgacgagtgcgtggacaagaggtccaagatgg 2615

                                                                        
Query: 429  caaggactatggcactctggtactgggacgggaacgtgttcagcagcaccttcttcgggg 488
            ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 2614 caaggactatggcactctggtactgggacgggaacgtgtccagcagcaccttctccgggg 2555

                                
Query: 489  cctccacaaagtcgcgcatg 508
            ||||||||||||||||||||
Sbjct: 2554 cctccacaaagtcgcgcatg 2535



 Score =  167 bits (84), Expect = 4e-38
 Identities = 93/95 (97%), Gaps = 2/95 (2%)
 Strand = Plus / Minus

                                                                        
Query: 23   cgtgtcctttaattataatttttggtgctcattcccattatacccaccgccgggccaaga 82
            |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 3031 cgtgtcctttaattataattt--ggtgctcattcccattatacccaccgccgggccaaga 2974

                                               
Query: 83   gactgaagacactcttatttacgcctagttgagtt 117
            |||||||||||||||||||||||||||||||||||
Sbjct: 2973 gactgaagacactcttatttacgcctagttgagtt 2939



 Score =  143 bits (72), Expect = 6e-31
 Identities = 74/75 (98%)
 Strand = Plus / Minus

                                                                        
Query: 135  aggcagctcaaatggagatgctgttggggatgcccatctncatcaccatcttctcgtccg 194
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2923 aggcagctcaaatggagatgctgttggggatgcccatctccatcaccatcttctcgtccg 2864

                           
Query: 195  tgggatcaccgtccg 209
            |||||||||||||||
Sbjct: 2863 tgggatcaccgtccg 2849
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>emb|AJ507212.1|HVU507212 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:2 gene)
          Length = 3023

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 128/157 (81%)
 Strand = Plus / Minus

                                                                        
Query: 144  aaatggagatgctgttggggatgcccatctncatcaccatcttctcgtccgtgggatcac 203
            ||||||| |||||||| || |||||||||| ||||||| | ||  ||||| | |||| ||
Sbjct: 2892 aaatggaaatgctgttcggaatgcccatctccatcaccgttttagcgtccatcggattac 2833

                                                                        
Query: 204  cgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtttttccggt 263
            ||| | | |||||||||||||| |||||||| | |||||| ||||| |||||| ||||| 
Sbjct: 2832 cgttcaatggcctgagcagcacgtacggcactacgccggcaccgtggcggtttctccggc 2773

                                                 
Query: 264  cggggtcgttgttccactcatncacctgctccacgat 300
             |  ||| ||||||||||| |  ||||||||| ||||
Sbjct: 2772 tgtcgtccttgttccactcttcgacctgctccgcgat 2736



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 362  gccggctcttcgtgcgtgcccatgtactcctcatccgacgagtgcg 407
            |||||||| | ||||||||||||||||||||| ||||||| |||||
Sbjct: 2674 gccggctcctggtgcgtgcccatgtactcctcgtccgacgcgtgcg 2629
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 42/43 (97%)
 Strand = Plus / Minus

                                                           
Query: 139      agctcaaatggagatgctgttggggatgcccatctncatcacc 181
                ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 22970463 agctcaaatggagatgctgttggggatgcccatctccatcacc 22970421



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 95/115 (82%)
 Strand = Plus / Plus

                                                                            
Query: 141      ctcaaatggagatgctgttggggatgcccatctncatcaccatcttctcgtccgtgggat 200
                ||||||| ||||||||||||||||| ||||||| ||||||   | ||  |||| | || |
Sbjct: 22888635 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 22888694

                                                                       
Query: 201      caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 255
                ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 22888695 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 22888749



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 444      tctggtactgggacgggaacgtgttcagca 473
                |||||||||| ||||||||||||| |||||
Sbjct: 22970158 tctggtactgcgacgggaacgtgtccagca 22970129



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 373      gtgcgtgcccatgtactcctc 393
                |||||||||||||||||||||
Sbjct: 22970229 gtgcgtgcccatgtactcctc 22970209



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 374      tgcgtgcccatgtactcctc 393
                ||||||||||||||||||||
Sbjct: 22888868 tgcgtgcccatgtactcctc 22888887
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 42/43 (97%)
 Strand = Plus / Minus

                                                           
Query: 139      agctcaaatggagatgctgttggggatgcccatctncatcacc 181
                ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 22898654 agctcaaatggagatgctgttggggatgcccatctccatcacc 22898612



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 95/115 (82%)
 Strand = Plus / Plus

                                                                            
Query: 141      ctcaaatggagatgctgttggggatgcccatctncatcaccatcttctcgtccgtgggat 200
                ||||||| ||||||||||||||||| ||||||| ||||||   | ||  |||| | || |
Sbjct: 22816826 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 22816885

                                                                       
Query: 201      caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 255
                ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 22816886 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 22816940



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 444      tctggtactgggacgggaacgtgttcagca 473
                |||||||||| ||||||||||||| |||||
Sbjct: 22898349 tctggtactgcgacgggaacgtgtccagca 22898320



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 373      gtgcgtgcccatgtactcctc 393
                |||||||||||||||||||||
Sbjct: 22898420 gtgcgtgcccatgtactcctc 22898400



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 374      tgcgtgcccatgtactcctc 393
                ||||||||||||||||||||
Sbjct: 22817059 tgcgtgcccatgtactcctc 22817078
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>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 155568

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 42/43 (97%)
 Strand = Plus / Minus

                                                        
Query: 139   agctcaaatggagatgctgttggggatgcccatctncatcacc 181
             ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 79740 agctcaaatggagatgctgttggggatgcccatctccatcacc 79698



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 444   tctggtactgggacgggaacgtgttcagca 473
             |||||||||| ||||||||||||| |||||
Sbjct: 79435 tctggtactgcgacgggaacgtgtccagca 79406



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 373   gtgcgtgcccatgtactcctc 393
             |||||||||||||||||||||
Sbjct: 79506 gtgcgtgcccatgtactcctc 79486
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>emb|AJ270938.1|OSA270938 Oryza sativa mRNA for lipoxygenase (rci-1 gene)
          Length = 3018

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 95/115 (82%)
 Strand = Plus / Minus

                                                                        
Query: 141  ctcaaatggagatgctgttggggatgcccatctncatcaccatcttctcgtccgtgggat 200
            ||||||| ||||||||||||||||| ||||||| ||||||   | ||  |||| | || |
Sbjct: 2817 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 2758

                                                                   
Query: 201  caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 255
            ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 2757 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 2703



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 374  tgcgtgcccatgtactcctc 393
            ||||||||||||||||||||
Sbjct: 2584 tgcgtgcccatgtactcctc 2565
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>dbj|AK072241.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002P20, full
            insert sequence
          Length = 3080

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 95/115 (82%)
 Strand = Plus / Minus

                                                                        
Query: 141  ctcaaatggagatgctgttggggatgcccatctncatcaccatcttctcgtccgtgggat 200
            ||||||| ||||||||||||||||| ||||||| ||||||   | ||  |||| | || |
Sbjct: 2836 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 2777

                                                                   
Query: 201  caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 255
            ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 2776 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 2722



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 374  tgcgtgcccatgtactcctc 393
            ||||||||||||||||||||
Sbjct: 2603 tgcgtgcccatgtactcctc 2584
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>dbj|AK066737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013079G10, full
            insert sequence
          Length = 2747

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 95/115 (82%)
 Strand = Plus / Minus

                                                                        
Query: 141  ctcaaatggagatgctgttggggatgcccatctncatcaccatcttctcgtccgtgggat 200
            ||||||| ||||||||||||||||| ||||||| ||||||   | ||  |||| | || |
Sbjct: 2343 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 2284

                                                                   
Query: 201  caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 255
            ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 2283 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 2229



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 374  tgcgtgcccatgtactcctc 393
            ||||||||||||||||||||
Sbjct: 2110 tgcgtgcccatgtactcctc 2091
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>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 148705

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 95/115 (82%)
 Strand = Plus / Minus

                                                                         
Query: 141   ctcaaatggagatgctgttggggatgcccatctncatcaccatcttctcgtccgtgggat 200
             ||||||| ||||||||||||||||| ||||||| ||||||   | ||  |||| | || |
Sbjct: 68209 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 68150

                                                                    
Query: 201   caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 255
             ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 68149 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 68095



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   tgcgtgcccatgtactcctc 393
             ||||||||||||||||||||
Sbjct: 67976 tgcgtgcccatgtactcctc 67957
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>ref|XM_469412.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2686

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 141  ctcaaatggagatgctgttggggatgcccat 171
            |||| ||||||||||||||||||||||||||
Sbjct: 2447 ctcagatggagatgctgttggggatgcccat 2417
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>ref|XM_469411.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3165

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 141  ctcaaatggagatgctgttggggatgcccat 171
            |||| ||||||||||||||||||||||||||
Sbjct: 2926 ctcagatggagatgctgttggggatgcccat 2896
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>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                            
Query: 141   ctcaaatggagatgctgttggggatgcccat 171
             |||| ||||||||||||||||||||||||||
Sbjct: 65817 ctcagatggagatgctgttggggatgcccat 65787



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 149   gagatgctgttggggatgccc 169
             |||||||||||||||||||||
Sbjct: 47230 gagatgctgttggggatgccc 47210
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 141      ctcaaatggagatgctgttggggatgcccat 171
                |||| ||||||||||||||||||||||||||
Sbjct: 27821687 ctcagatggagatgctgttggggatgcccat 27821657



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 141      ctcaaatggagatgctgttggggatgccc 169
                ||||||||| |||||||||||||||||||
Sbjct: 14300017 ctcaaatggtgatgctgttggggatgccc 14300045



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 146      atggagatgctgttggggatgccc 169
                ||||||||||||||||||||||||
Sbjct: 30026445 atggagatgctgttggggatgccc 30026422



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 149      gagatgctgttggggatgccc 169
                |||||||||||||||||||||
Sbjct: 27803100 gagatgctgttggggatgccc 27803080
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>emb|AJ507213.1|HVU507213 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:3 gene)
          Length = 2967

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 142  tcaaatggagatgctgttggggatgcc 168
            |||||||||||||||||||||||||||
Sbjct: 2774 tcaaatggagatgctgttggggatgcc 2748



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 210  acggcctgagcagcacatacggcaccatgccggcgcc 246
            ||||| |||||||| | |||||||| |||||||||||
Sbjct: 2721 acggcttgagcagctcgtacggcacgatgccggcgcc 2685
to top
>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity
            lipoxygenase mRNA, complete cds
          Length = 3154

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 141  ctcaaatggagatgctgttggggatgcccat 171
            |||| ||||||||||||||||||||||||||
Sbjct: 2920 ctcagatggagatgctgttggggatgcccat 2890
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 141      ctcaaatggagatgctgttggggatgcccat 171
                |||| ||||||||||||||||||||||||||
Sbjct: 27913011 ctcagatggagatgctgttggggatgcccat 27912981



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 141      ctcaaatggagatgctgttggggatgccc 169
                ||||||||| |||||||||||||||||||
Sbjct: 14294992 ctcaaatggtgatgctgttggggatgccc 14295020



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 146      atggagatgctgttggggatgccc 169
                ||||||||||||||||||||||||
Sbjct: 30117867 atggagatgctgttggggatgccc 30117844



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 149      gagatgctgttggggatgccc 169
                |||||||||||||||||||||
Sbjct: 27894424 gagatgctgttggggatgccc 27894404
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>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full
            insert sequence
          Length = 1560

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 141  ctcaaatggagatgctgttggggatgcccat 171
            |||| ||||||||||||||||||||||||||
Sbjct: 1333 ctcagatggagatgctgttggggatgcccat 1303
to top
>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full
            insert sequence
          Length = 2851

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 141  ctcaaatggagatgctgttggggatgcccat 171
            |||| ||||||||||||||||||||||||||
Sbjct: 2598 ctcagatggagatgctgttggggatgcccat 2568
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>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full
            insert sequence
          Length = 3167

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 141  ctcaaatggagatgctgttggggatgcccat 171
            |||| ||||||||||||||||||||||||||
Sbjct: 2928 ctcagatggagatgctgttggggatgcccat 2898
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>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full
            insert sequence
          Length = 1726

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 141  ctcaaatggagatgctgttggggatgcccat 171
            |||| ||||||||||||||||||||||||||
Sbjct: 1498 ctcagatggagatgctgttggggatgcccat 1468
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>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA
           sequence
          Length = 1020

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 140 gctcaaatggagatgctgttggggatgccc 169
           ||||| ||||||||||||||||||||||||
Sbjct: 755 gctcagatggagatgctgttggggatgccc 726
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>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds
          Length = 5013

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 140  gctcaaatggagatgctgttggggatgccc 169
            ||||| ||||||||||||||||||||||||
Sbjct: 4664 gctcagatggagatgctgttggggatgccc 4635
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>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds
          Length = 3003

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 138  cagctcaaatggagatgctgttggggatgcccat 171
            ||||||| ||||||| ||||||||||||||||||
Sbjct: 2768 cagctcagatggagacgctgttggggatgcccat 2735
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>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds
          Length = 2267

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 140  gctcaaatggagatgctgttggggatgccc 169
            ||||| ||||||||||||||||||||||||
Sbjct: 2066 gctcagatggagatgctgttggggatgccc 2037
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>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA
           sequence
          Length = 1129

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 141 ctcaaatggagatgctgttggggatgccc 169
           |||| ||||||||||||||||||||||||
Sbjct: 907 ctcagatggagatgctgttggggatgccc 879
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>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete
             sequence
          Length = 158714

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 141   ctcaaatggagatgctgttggggatgccc 169
             ||||||||| |||||||||||||||||||
Sbjct: 49246 ctcaaatggtgatgctgttggggatgccc 49274
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>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18,
              complete sequence
          Length = 122159

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 141    ctcaaatggagatgctgttggggatgccc 169
              ||||||||| |||||||||||||||||||
Sbjct: 111405 ctcaaatggtgatgctgttggggatgccc 111433
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>ref|XM_469655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2613

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 146  atggagatgctgttggggatgccc 169
            ||||||||||||||||||||||||
Sbjct: 2609 atggagatgctgttggggatgccc 2586
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>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds
          Length = 1331

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 146  atggagatgctgttggggatgccc 169
            ||||||||||||||||||||||||
Sbjct: 1082 atggagatgctgttggggatgccc 1059
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>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2
          Length = 2830

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 146  atggagatgctgttggggatgccc 169
            ||||||||||||||||||||||||
Sbjct: 2691 atggagatgctgttggggatgccc 2668
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>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 146   atggagatgctgttggggatgccc 169
             ||||||||||||||||||||||||
Sbjct: 81306 atggagatgctgttggggatgccc 81329
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>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds
          Length = 2595

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 146  atggagatgctgttggggatgccc 169
            ||||||||||||||||||||||||
Sbjct: 2591 atggagatgctgttggggatgccc 2568
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>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full
            insert sequence
          Length = 2928

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 146  atggagatgctgttggggatgccc 169
            ||||||||||||||||||||||||
Sbjct: 2724 atggagatgctgttggggatgccc 2701
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>gb|AY111869.1| Zea mays CL452_-8 mRNA sequence
          Length = 568

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 140 gctcaaatggagatgctgttggggatgcccat 171
           ||||| ||||||||||||||||| ||||||||
Sbjct: 369 gctcatatggagatgctgttgggaatgcccat 338
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>gb|AY103567.1| Zea mays PCO116252 mRNA sequence
          Length = 3135

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 140  gctcaaatggagatgctgttggggatgcccat 171
            ||||| ||||||||||||||||| ||||||||
Sbjct: 2902 gctcatatggagatgctgttgggaatgcccat 2871
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>gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partial cds
          Length = 1814

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 146  atggagatgctgttggggatgccc 169
            ||||||||||||||||||||||||
Sbjct: 1552 atggagatgctgttggggatgccc 1529
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>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds
          Length = 2818

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 146  atggagatgctgttggggatgccc 169
            ||||||||||||||||||||||||
Sbjct: 2653 atggagatgctgttggggatgccc 2630
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>ref|XM_464447.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3123

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 210  acggcctgagcagcacatacggcaccatgccggcgccg 247
            ||||| |||||||| | |||||||| ||||||||||||
Sbjct: 2828 acggcttgagcagctcgtacggcacgatgccggcgccg 2791



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 141  ctcaaatggagatgctgttggggatgccc 169
            |||| |||||||||||||| |||||||||
Sbjct: 2882 ctcagatggagatgctgtttgggatgccc 2854
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                     
Query: 210     acggcctgagcagcacatacggcaccatgccggcgccg 247
               ||||| |||||||| | |||||||| ||||||||||||
Sbjct: 5277016 acggcttgagcagctcgtacggcacgatgccggcgccg 5277053



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 141     ctcaaatggagatgctgttggggatgccc 169
               |||| |||||||||||||| |||||||||
Sbjct: 5276962 ctcagatggagatgctgtttgggatgccc 5276990
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>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1225_F07
          Length = 142772

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 210  acggcctgagcagcacatacggcaccatgccggcgccg 247
            ||||| |||||||| | |||||||| ||||||||||||
Sbjct: 3319 acggcttgagcagctcgtacggcacgatgccggcgccg 3356



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 141  ctcaaatggagatgctgttggggatgccc 169
            |||| |||||||||||||| |||||||||
Sbjct: 3265 ctcagatggagatgctgtttgggatgccc 3293
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>dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074B03, full
            insert sequence
          Length = 3160

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 210  acggcctgagcagcacatacggcaccatgccggcgccg 247
            ||||| |||||||| | |||||||| ||||||||||||
Sbjct: 2827 acggcttgagcagctcgtacggcacgatgccggcgccg 2790



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 141  ctcaaatggagatgctgttggggatgccc 169
            |||| |||||||||||||| |||||||||
Sbjct: 2881 ctcagatggagatgctgtttgggatgccc 2853
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>dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B01, full
            insert sequence
          Length = 2250

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 210  acggcctgagcagcacatacggcaccatgccggcgccg 247
            ||||| |||||||| | |||||||| ||||||||||||
Sbjct: 1989 acggcttgagcagctcgtacggcacgatgccggcgccg 1952



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 141  ctcaaatggagatgctgttggggatgccc 169
            |||| |||||||||||||| |||||||||
Sbjct: 2043 ctcagatggagatgctgtttgggatgccc 2015
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>ref|XM_469409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2601

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 149  gagatgctgttggggatgccc 169
            |||||||||||||||||||||
Sbjct: 2594 gagatgctgttggggatgccc 2574
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>emb|AL596224.10| Human DNA sequence from clone RP11-26F12 on chromosome 1 Contains part
             of the CSMD2 gene for CUB and Sushi multiple domains 2,
             complete sequence
          Length = 114784

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 24    gtgtcctttaattataatttt 44
             |||||||||||||||||||||
Sbjct: 67048 gtgtcctttaattataatttt 67028
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>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 149   gagatgctgttggggatgccc 169
             |||||||||||||||||||||
Sbjct: 10793 gagatgctgttggggatgccc 10813
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>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds
          Length = 2845

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 141  ctcaaatggagatgctgttggggatgccc 169
            ||||||||||||||||||| || ||||||
Sbjct: 2623 ctcaaatggagatgctgtttggaatgccc 2595
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>emb|CR354437.13| Zebrafish DNA sequence from clone DKEY-11D10 in linkage group 23,
            complete sequence
          Length = 205907

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 311  ctctccttgaactcctcaaa 330
            ||||||||||||||||||||
Sbjct: 3675 ctctccttgaactcctcaaa 3694
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>gb|BC077139.1| Danio rerio wu:fc51g12, mRNA (cDNA clone IMAGE:7146502), partial cds
          Length = 2835

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 313  ctccttgaactcctcaaatgcctg 336
            |||||||||||||||||| |||||
Sbjct: 1903 ctccttgaactcctcaaaagcctg 1880
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>ref|XM_688015.1| PREDICTED: Danio rerio hypothetical protein LOC553235 (LOC553235),
            mRNA
          Length = 4007

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 313  ctccttgaactcctcaaatgcctg 336
            |||||||||||||||||| |||||
Sbjct: 1824 ctccttgaactcctcaaaagcctg 1801
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>emb|BX324196.4| Zebrafish DNA sequence from clone CH211-142A12 in linkage group 23,
             complete sequence
          Length = 89652

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   ctctccttgaactcctcaaa 330
             ||||||||||||||||||||
Sbjct: 37123 ctctccttgaactcctcaaa 37142
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>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence
          Length = 1304

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 146 atggagatgctgttggggatgccc 169
           |||||||||||| |||||||||||
Sbjct: 138 atggagatgctgctggggatgccc 161
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>emb|CR753890.27| Zebrafish DNA sequence from clone CH211-207D8 in linkage group 9,
              complete sequence
          Length = 201771

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     tgtcctttaattataatttt 44
              ||||||||||||||||||||
Sbjct: 125206 tgtcctttaattataatttt 125225
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>gb|AY104322.1| Zea mays PCO093659 mRNA sequence
          Length = 1439

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 146  atggagatgctgttggggatgccc 169
            |||||||||||| |||||||||||
Sbjct: 1210 atggagatgctgctggggatgccc 1187


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,217,541
Number of Sequences: 3902068
Number of extensions: 3217541
Number of successful extensions: 58501
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58211
Number of HSP's gapped (non-prelim): 289
length of query: 508
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 486
effective length of database: 17,147,199,772
effective search space: 8333539089192
effective search space used: 8333539089192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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