>MRC2_HUMAN (Q9UBG0) Macrophage mannose receptor 2 precursor (Urokinase|
            receptor-associated protein) (Endocytic receptor 180)
            (CD280 antigen)
          Length = 1479

 Score = 32.0 bits (71), Expect = 0.59
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = -2

Query: 308  TKLAGCSVKLSTDEHPPGRICYTAASPRGHMDVAWGVNRE 189
            TKL G    +S+   PP RI Y  + P+G  D AW   RE
Sbjct: 1236 TKLQGAVCGVSSGPPPPRRISYHGSCPQGLADSAWIPFRE 1275

>DEGU_BACSU (P13800) Transcriptional regulatory protein degU (Protease|
           production enhancer protein)
          Length = 229

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -3

Query: 340 HPHVCIVYINSPN*QVVPSNCQLMSIPQEEYATLLHHHED 221
           HP V I+ IN PN   V +  QL+ +  E    +L  H+D
Sbjct: 49  HPDVVIMDINMPNVNGVEATKQLVELYPESKVIILSIHDD 88

>LPXB_BORPE (Q7VYB7) Lipid-A-disaccharide synthase (EC 2.4.1.182)|
          Length = 393

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -2

Query: 269 EHP-PGRICYTAASPRGHMDVAWGVNRERN 183
           +HP PG  C TAA  +G   VAW V    N
Sbjct: 243 QHPVPGLRCVTAAEGQGETPVAWSVMEASN 272

>LPXB_BORPA (Q7WA47) Lipid-A-disaccharide synthase (EC 2.4.1.182)|
          Length = 393

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -2

Query: 269 EHP-PGRICYTAASPRGHMDVAWGVNRERN 183
           +HP PG  C TAA  +G   VAW V    N
Sbjct: 243 QHPVPGLRCVTAAEGQGETPVAWSVMEASN 272

>LPXB_BORBR (Q7WJ81) Lipid-A-disaccharide synthase (EC 2.4.1.182)|
          Length = 393

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -2

Query: 269 EHP-PGRICYTAASPRGHMDVAWGVNRERN 183
           +HP PG  C TAA  +G   VAW V    N
Sbjct: 243 QHPVPGLRCVTAAEGQGETPVAWSVMEASN 272


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,759,390
Number of Sequences: 219361
Number of extensions: 916080
Number of successful extensions: 1511
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1511
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)