>ref|NM_193606.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2130

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 351  ataccagcaactcccttggcttgcgctgccgcttgttgtgctgccgcggc 400
            ||||||||||| |||||||||| ||| || ||||||| |||||| |||||
Sbjct: 2120 ataccagcaacacccttggctttcgccgcagcttgttttgctgcggcggc 2071

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 351      ataccagcaactcccttggcttgcgctgccgcttgttgtgctgccgcggc 400
                ||||||||||| |||||||||| ||| || ||||||| |||||| |||||
Sbjct: 22075559 ataccagcaacacccttggctttcgccgcagcttgttttgctgcggcggc 22075510

>dbj|AP003413.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1151A10
          Length = 124344

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 351   ataccagcaactcccttggcttgcgctgccgcttgttgtgctgccgcggc 400
             ||||||||||| |||||||||| ||| || ||||||| |||||| |||||
Sbjct: 87072 ataccagcaacacccttggctttcgccgcagcttgttttgctgcggcggc 87023

>dbj|AK103979.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-B05, full
           insert sequence
          Length = 788

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 351 ataccagcaactcccttggcttgcgctgccgcttgttgtgctgccgcggc 400
           ||||||||||| |||||||||| ||| || ||||||| |||||| |||||
Sbjct: 385 ataccagcaacacccttggctttcgccgcagcttgttttgctgcggcggc 336

>dbj|AK072509.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128D21, full
            insert sequence
          Length = 2606

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 351  ataccagcaactcccttggcttgcgctgccgcttgttgtgctgccgcggc 400
            ||||||||||| |||||||||| ||| || ||||||| |||||| |||||
Sbjct: 2260 ataccagcaacacccttggctttcgccgcagcttgttttgctgcggcggc 2211

>gb|AY110721.1| Zea mays CL34516_1 mRNA sequence
          Length = 986

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                       
Query: 339 tgctaagacccgataccagcaactcccttggcttgcgctgccgcttgttgtgctgccgcg 398
           |||||||| || |||||||| ||||||||  |||  |||||||| || || |||||||||
Sbjct: 661 tgctaagaacccataccagccactcccttaactttggctgccgcctgctgggctgccgcg 602

                
Query: 399 gcggc 403
           |||||
Sbjct: 601 gcggc 597

>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 88      ttattgagatgtgaagttatca 109
               ||||||||||||||||||||||
Sbjct: 2732355 ttattgagatgtgaagttatca 2732334

>gb|AC022889.8| Homo sapiens chromosome 15, clone RP11-492D5, complete sequence
          Length = 108652

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 56    tacaaatacaaggcagatttt 76
             |||||||||||||||||||||
Sbjct: 11060 tacaaatacaaggcagatttt 11080

>gb|AC104420.2| Homo sapiens chromosome 15, clone RP11-945A13, complete sequence
          Length = 178756

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 56     tacaaatacaaggcagatttt 76
              |||||||||||||||||||||
Sbjct: 113766 tacaaatacaaggcagatttt 113786

>gb|AC115078.11| Mus musculus chromosome 3, clone RP24-457B22, complete sequence
          Length = 179789

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 326   gcaaacatgtggatgctaaga 346
             |||||||||||||||||||||
Sbjct: 51371 gcaaacatgtggatgctaaga 51391

>gb|AY110343.1| Zea mays CL56358_1 mRNA sequence
          Length = 1226

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 352 taccagcaactcccttggcttgcgctgcc 380
           |||| |||||||||||||||| |||||||
Sbjct: 324 taccggcaactcccttggctttcgctgcc 352



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 352 taccagcaactcccttggcttgcgctgcc 380
           |||| |||||||||||||||| |||||||
Sbjct: 207 taccggcaactcccttggctttcgctgcc 235



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 352 taccagcaactcccttggcttgcgctgccgcttgttgtgc 391
           |||| |||||||||||||||| | ||||||| | ||||||
Sbjct: 441 tacctgcaactcccttggctttccctgccgcctcttgtgc 480

>gb|AC120416.11| Mus musculus chromosome 1, clone RP24-472N18, complete sequence
          Length = 199727

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 173    tcttccatgtgtttctttctctattcac 200
              ||||| ||||| ||||||||||||||||
Sbjct: 134904 tcttcaatgtgattctttctctattcac 134877

>ref|XM_634939.1| Dictyostelium discoideum hypothetical protein (DDB0220697), partial
            mRNA
          Length = 3627

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 375  gctgccgcttgttgtgctgc 394
            ||||||||||||||||||||
Sbjct: 1658 gctgccgcttgttgtgctgc 1639

>gb|AC158779.4| Mus musculus chromosome 15, clone RP23-258P17, complete sequence
          Length = 203163

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 161    tatgtgtgcatttcttccatgtgtttct 188
              ||||||||| ||||||||||||| ||||
Sbjct: 168470 tatgtgtgcttttcttccatgtgattct 168443

>gb|AC112988.7| Mus musculus chromosome 5, clone RP24-294H5, complete sequence
          Length = 151194

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 242    tgtagcatattcttcctggg 261
              ||||||||||||||||||||
Sbjct: 137840 tgtagcatattcttcctggg 137821

>gb|AC144508.3| Mus musculus BAC clone RP24-152C23 from chromosome 15, complete sequence
          Length = 155524

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 241    gtgtagcatattcttcctgg 260
              ||||||||||||||||||||
Sbjct: 102535 gtgtagcatattcttcctgg 102516

>gb|AC004875.2| Homo sapiens PAC clone RP4-745K6 from 7, complete sequence
          Length = 130607

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   tattcacaccccaagcaaca 213
             ||||||||||||||||||||
Sbjct: 18321 tattcacaccccaagcaaca 18302

>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 389    tgctgccgcggcggcagccngctgccg 415
              ||||||||||||||||| | |||||||
Sbjct: 664412 tgctgccgcggcggcagactgctgccg 664386

>emb|AL157363.9| Human DNA sequence from clone RP11-268K3 on chromosome 13 Contains the
             3' end of the GPC5 gene for glypican 5, complete sequence
          Length = 164732

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    attgagatgtgaagttatca 109
             ||||||||||||||||||||
Sbjct: 22202 attgagatgtgaagttatca 22183

>emb|AL109805.14|HSDJ581P3 Human DNA sequence from clone RP4-581P3 on chromosome 20 Contains the
             SF3A3P gene for splicing factor 3a subunit 3 pseudogene
             and part of the ATRN gene for attractin, complete sequence
          Length = 73666

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 171   tttcttccatgtgtttctttctct 194
             |||||||||| |||||||||||||
Sbjct: 45849 tttcttccatctgtttctttctct 45826

>gb|AC163990.2| Mus musculus chromosome 5, clone RP24-166G8, complete sequence
          Length = 172641

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 242  tgtagcatattcttcctggg 261
            ||||||||||||||||||||
Sbjct: 8012 tgtagcatattcttcctggg 8031

>gb|AC160463.5| Mus musculus chromosome 1, clone RP23-266D4, complete sequence
          Length = 167352

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 173   tcttccatgtgtttctttctctattcac 200
             ||||| ||||| ||||||||||||||||
Sbjct: 62147 tcttcaatgtgattctttctctattcac 62120

>gb|AC087664.5| Homo sapiens chromosome 8, clone RP11-379I19, complete sequence
          Length = 199456

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 302   atttggtgaattaatataca 321
             ||||||||||||||||||||
Sbjct: 56689 atttggtgaattaatataca 56708

>gb|AC099051.2| Homo sapiens chromosome 3 clone RP11-416A9, complete sequence
          Length = 174372

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 169   catttcttccatgtgtttctttct 192
             |||||||||||||| |||||||||
Sbjct: 17582 catttcttccatgtttttctttct 17559

>gb|AC182039.1| Ornithorhynchus anatinus chromosome UNK clone OABb-323A1, complete
             sequence
          Length = 120208

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    acaaggcagattttaacgat 82
             ||||||||||||||||||||
Sbjct: 93009 acaaggcagattttaacgat 92990

>gb|AC123023.4| Homo sapiens 3 BAC RP11-727M21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 183779

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 169    catttcttccatgtgtttctttct 192
              |||||||||||||| |||||||||
Sbjct: 165762 catttcttccatgtttttctttct 165739

>gb|AC114425.14| Mus musculus chromosome 5, clone RP24-85B11, complete sequence
          Length = 208233

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 242    tgtagcatattcttcctggg 261
              ||||||||||||||||||||
Sbjct: 191951 tgtagcatattcttcctggg 191970

>gb|AC126554.3| Mus musculus BAC clone RP23-465O13 from 12, complete sequence
          Length = 186243

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 168    gcatttcttccatgtgtttctttc 191
              |||||||||||||| |||||||||
Sbjct: 111862 gcatttcttccatgagtttctttc 111885

>gb|AC147783.13| Mus musculus chromosome 12, clone RP23-256M6, complete sequence
          Length = 212734

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 168    gcatttcttccatgtgtttctttc 191
              |||||||||||||| |||||||||
Sbjct: 107694 gcatttcttccatgagtttctttc 107671

>gb|AC127288.4| Mus musculus BAC clone RP23-358J11 from 8, complete sequence
          Length = 210710

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 9      ctgatgagcaaatattattggtaa 32
              |||||| |||||||||||||||||
Sbjct: 181724 ctgatgggcaaatattattggtaa 181701

>gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome
          Length = 1197687

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 355    cagcaactcccttggcttgcgctgccgc 382
              |||||| ||||||||| |||||||||||
Sbjct: 516116 cagcaaatcccttggcgtgcgctgccgc 516143


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,124,586
Number of Sequences: 3902068
Number of extensions: 4124586
Number of successful extensions: 77542
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77437
Number of HSP's gapped (non-prelim): 105
length of query: 417
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 395
effective length of database: 17,147,199,772
effective search space: 6773143909940
effective search space used: 6773143909940
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)