Clone Name | rbah63i21 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009459.1| Triticum aestivum clone wlsu2.pk0003.a5:fis, full insert mRNA sequence Length = 1142 Score = 375 bits (189), Expect = e-100 Identities = 266/287 (92%), Gaps = 6/287 (2%) Strand = Plus / Minus Query: 293 tagctgcttctcaaaaagttccatagctgagagcttcttcctgatctgcaaaacaaaatc 352 |||||||||||||||||||| ||||||||||| || ||||||||||||||||||| |||| Sbjct: 844 tagctgcttctcaaaaagtttcatagctgagaactccttcctgatctgcaaaacagaatc 785 Query: 353 attgctcgcc-cca-ggtgtatagct-atattttcttaatgatctgaacaacatcctcgt 409 ||||| | ||| ||||| ||||| ||||||||||||||||||||||||| ||||||| Sbjct: 784 ---gctcggcaccacggtgtgtagcttatattttcttaatgatctgaacaacgtcctcgt 728 Query: 410 cctcaagctcatgttccttcccgactctctgaggcttgtgcttcacgctagaaccccaca 469 ||||||||||||| ||||| || |||||||||||||| |||||||||||||||||||||| Sbjct: 727 cctcaagctcatgctccttgccaactctctgaggcttatgcttcacgctagaaccccaca 668 Query: 470 ccagcgcatatttaaactgtttcgccatgtccttgtggatttggttgcagaagtcttcta 529 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 667 ccagtgcatatttaaactgtttcgccatgtccttgtggatttggttgcagaagtcttcca 608 Query: 530 ctgttttcctcttggatgataagatgacaggatcctcgtaatctggg 576 ||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 607 ctgttttcctcttggatgataagatcacaggatcctcgtagtctggg 561 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 84 agaaccatcttatcaccttctcaagatagacaagcatctttccatgtgttcgg 136 |||||||||||| || |||||| ||||||| | |||||||||||||||||||| Sbjct: 1072 agaaccatcttagcatcttctcgagatagatatgcatctttccatgtgttcgg 1020 Score = 46.1 bits (23), Expect = 0.13 Identities = 48/55 (87%), Gaps = 1/55 (1%) Strand = Plus / Minus Query: 189 aaaaactgtccacattctgtctttcgatggaaacc-gggttttatgcaaacagcg 242 |||||||||||||||| |||||| ||| |||||| | |||||||||||||||| Sbjct: 949 aaaaactgtccacattttgtcttgtgatcgaaaccagatttttatgcaaacagcg 895
>ref|XM_479223.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1548 Score = 222 bits (112), Expect = 1e-54 Identities = 175/196 (89%) Strand = Plus / Minus Query: 381 tttcttaatgatctgaacaacatcctcgtcctcaagctcatgttccttcccgactctctg 440 |||||| |||||||| ||||| ||||| |||||||||||||||||||| || |||||||| Sbjct: 1226 tttcttgatgatctggacaacgtcctcatcctcaagctcatgttccttgccaactctctg 1167 Query: 441 aggcttgtgcttcacgctagaaccccacaccagcgcatatttaaactgtttcgccatgtc 500 |||||| ||||||||||||||||||||||||| ||||||||||| |||||| ||||||| Sbjct: 1166 aggcttatgcttcacgctagaaccccacaccaatgcatatttaaattgtttcaccatgtc 1107 Query: 501 cttgtggatttggttgcagaagtcttctactgttttcctcttggatgataagatgacagg 560 |||||||||| ||||||||||||||| ||||||||| |||| || |||| ||| ||||| Sbjct: 1106 cttgtggattctgttgcagaagtcttccactgttttcttcttagaggatacgattacagg 1047 Query: 561 atcctcgtaatctggg 576 ||||| ||||||||| Sbjct: 1046 gtcctcataatctggg 1031 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 aagcatctttccatgtgttc 134 |||||||||||||||||||| Sbjct: 1510 aagcatctttccatgtgttc 1491
>dbj|AK066361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063L05, full insert sequence Length = 1548 Score = 222 bits (112), Expect = 1e-54 Identities = 175/196 (89%) Strand = Plus / Minus Query: 381 tttcttaatgatctgaacaacatcctcgtcctcaagctcatgttccttcccgactctctg 440 |||||| |||||||| ||||| ||||| |||||||||||||||||||| || |||||||| Sbjct: 1226 tttcttgatgatctggacaacgtcctcatcctcaagctcatgttccttgccaactctctg 1167 Query: 441 aggcttgtgcttcacgctagaaccccacaccagcgcatatttaaactgtttcgccatgtc 500 |||||| ||||||||||||||||||||||||| ||||||||||| |||||| ||||||| Sbjct: 1166 aggcttatgcttcacgctagaaccccacaccaatgcatatttaaattgtttcaccatgtc 1107 Query: 501 cttgtggatttggttgcagaagtcttctactgttttcctcttggatgataagatgacagg 560 |||||||||| ||||||||||||||| ||||||||| |||| || |||| ||| ||||| Sbjct: 1106 cttgtggattctgttgcagaagtcttccactgttttcttcttagaggatacgattacagg 1047 Query: 561 atcctcgtaatctggg 576 ||||| ||||||||| Sbjct: 1046 gtcctcataatctggg 1031 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 aagcatctttccatgtgttc 134 |||||||||||||||||||| Sbjct: 1510 aagcatctttccatgtgttc 1491
>gb|AY109675.1| Zea mays CL822_1 mRNA sequence Length = 1597 Score = 178 bits (90), Expect = 1e-41 Identities = 174/202 (86%) Strand = Plus / Minus Query: 375 ctatattttcttaatgatctgaacaacatcctcgtcctcaagctcatgttccttcccgac 434 |||||||||||||||||||||||| || ||||| || ||||||||||| ||||| || || Sbjct: 1261 ctatattttcttaatgatctgaacgacgtcctcatcgtcaagctcatgctccttgccaac 1202 Query: 435 tctctgaggcttgtgcttcacgctagaaccccacaccagcgcatatttaaactgtttcgc 494 |||||||||||| || ||||| || |||||||| ||||| || |||||||| ||||| | Sbjct: 1201 tctctgaggcttatgtttcacactggaaccccataccagagcgtatttaaattgtttgac 1142 Query: 495 catgtccttgtggatttggttgcagaagtcttctactgttttcctcttggatgataagat 554 |||||||||||||||| || |||||| ||||| || |||||| |||| ||||||| ||| Sbjct: 1141 catgtccttgtggattctgtcgcagaaatcttccacggttttcttcttagatgatacgat 1082 Query: 555 gacaggatcctcgtaatctggg 576 ||||||||||| ||||||||| Sbjct: 1081 aacaggatcctcataatctggg 1060
>ref|NM_120112.2| Arabidopsis thaliana GTP binding AT4G39520 mRNA, complete cds Length = 1611 Score = 119 bits (60), Expect = 1e-23 Identities = 156/188 (82%) Strand = Plus / Minus Query: 385 ttaatgatctgaacaacatcctcgtcctcaagctcatgttccttcccgactctctgaggc 444 |||| |||||||||||||||||||||||||||||| |||||||| || ||||| || ||| Sbjct: 1240 ttaacgatctgaacaacatcctcgtcctcaagctcgtgttcctttccaactctttgtggc 1181 Query: 445 ttgtgcttcacgctagaaccccacaccagcgcatatttaaactgtttcgccatgtccttg 504 ||||| || | || |||||||| ||||| || || || || ||||| |||||| ||| Sbjct: 1180 ttgtgtttggcacttgaaccccaaaccagagcgtacttgaattgtttaagcatgtctttg 1121 Query: 505 tggatttggttgcagaagtcttctactgttttcctcttggatgataagatgacaggatcc 564 || || || |||||||||| ||||||||| || |||||||||||||||| || ||||| Sbjct: 1120 tgaatccggatgcagaagtcctctactgttctcttcttggatgataagattacgggatca 1061 Query: 565 tcgtaatc 572 || ||||| Sbjct: 1060 tcataatc 1053
>gb|AY035034.1| Arabidopsis thaliana putative GTP-binding protein (At4g39520) mRNA, complete cds Length = 1474 Score = 119 bits (60), Expect = 1e-23 Identities = 156/188 (82%) Strand = Plus / Minus Query: 385 ttaatgatctgaacaacatcctcgtcctcaagctcatgttccttcccgactctctgaggc 444 |||| |||||||||||||||||||||||||||||| |||||||| || ||||| || ||| Sbjct: 1239 ttaacgatctgaacaacatcctcgtcctcaagctcgtgttcctttccaactctttgtggc 1180 Query: 445 ttgtgcttcacgctagaaccccacaccagcgcatatttaaactgtttcgccatgtccttg 504 ||||| || | || |||||||| ||||| || || || || ||||| |||||| ||| Sbjct: 1179 ttgtgtttggcacttgaaccccaaaccagagcgtacttgaattgtttaagcatgtctttg 1120 Query: 505 tggatttggttgcagaagtcttctactgttttcctcttggatgataagatgacaggatcc 564 || || || |||||||||| ||||||||| || |||||||||||||||| || ||||| Sbjct: 1119 tgaatccggatgcagaagtcctctactgttctcttcttggatgataagattacgggatca 1060 Query: 565 tcgtaatc 572 || ||||| Sbjct: 1059 tcataatc 1052
>emb|BX827633.1|CNS0A3PN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS87ZF10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1584 Score = 119 bits (60), Expect = 1e-23 Identities = 156/188 (82%) Strand = Plus / Minus Query: 385 ttaatgatctgaacaacatcctcgtcctcaagctcatgttccttcccgactctctgaggc 444 |||| |||||||||||||||||||||||||||||| |||||||| || ||||| || ||| Sbjct: 1239 ttaacgatctgaacaacatcctcgtcctcaagctcgtgttcctttccaactctttgtggc 1180 Query: 445 ttgtgcttcacgctagaaccccacaccagcgcatatttaaactgtttcgccatgtccttg 504 ||||| || | || |||||||| ||||| || || || || ||||| |||||| ||| Sbjct: 1179 ttgtgtttggcacttgaaccccaaaccagagcgtacttgaattgtttaagcatgtctttg 1120 Query: 505 tggatttggttgcagaagtcttctactgttttcctcttggatgataagatgacaggatcc 564 || || || |||||||||| ||||||||| || |||||||||||||||| || ||||| Sbjct: 1119 tgaatccggatgcagaagtcctctactgttctcttcttggatgataagattacgggatca 1060 Query: 565 tcgtaatc 572 || ||||| Sbjct: 1059 tcataatc 1052
>emb|BX829215.1|CNS0A3J3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL81ZE07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1407 Score = 119 bits (60), Expect = 1e-23 Identities = 156/188 (82%) Strand = Plus / Minus Query: 385 ttaatgatctgaacaacatcctcgtcctcaagctcatgttccttcccgactctctgaggc 444 |||| |||||||||||||||||||||||||||||| |||||||| || ||||| || ||| Sbjct: 1211 ttaacgatctgaacaacatcctcgtcctcaagctcgtgttcctttccaactctttgtggc 1152 Query: 445 ttgtgcttcacgctagaaccccacaccagcgcatatttaaactgtttcgccatgtccttg 504 ||||| || | || |||||||| ||||| || || || || ||||| |||||| ||| Sbjct: 1151 ttgtgtttggcacttgaaccccaaaccagagcgtacttgaattgtttaagcatgtctttg 1092 Query: 505 tggatttggttgcagaagtcttctactgttttcctcttggatgataagatgacaggatcc 564 || || || |||||||||| ||||||||| || |||||||||||||||| || ||||| Sbjct: 1091 tgaatccggatgcagaagtcctctactgttctcttcttggatgataagattacgggatca 1032 Query: 565 tcgtaatc 572 || ||||| Sbjct: 1031 tcataatc 1024
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Plus Query: 478 tatttaaactgtttcgccatgtccttgtggatttggttgcagaagtcttctactgttttc 537 |||||||| |||||| ||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 25966612 tatttaaattgtttcaccatgtccttgtggattctgttgcagaagtcttccactgttttc 25966671 Query: 538 ctcttggatgataagatgacaggatcctcgtaatctggg 576 |||| || |||| ||| ||||| ||||| ||||||||| Sbjct: 25966672 ttcttagaggatacgattacagggtcctcataatctggg 25966710 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 433 actctctgaggcttgtgcttcacgctagaaccccacacca 472 |||||||||||||| ||||||||||||||||||||||||| Sbjct: 25966484 actctctgaggcttatgcttcacgctagaaccccacacca 25966523 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 381 tttcttaatgatctgaacaacatcctcgtcctcaagctcatgttcct 427 |||||| |||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 25966338 tttcttgatgatctggacaacgtcctcatcctcaagctcatgttcct 25966384 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 aagcatctttccatgtgttc 134 |||||||||||||||||||| Sbjct: 25966054 aagcatctttccatgtgttc 25966073
>dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0506F02 Length = 151612 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Plus Query: 478 tatttaaactgtttcgccatgtccttgtggatttggttgcagaagtcttctactgttttc 537 |||||||| |||||| ||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 43624 tatttaaattgtttcaccatgtccttgtggattctgttgcagaagtcttccactgttttc 43683 Query: 538 ctcttggatgataagatgacaggatcctcgtaatctggg 576 |||| || |||| ||| ||||| ||||| ||||||||| Sbjct: 43684 ttcttagaggatacgattacagggtcctcataatctggg 43722 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 433 actctctgaggcttgtgcttcacgctagaaccccacacca 472 |||||||||||||| ||||||||||||||||||||||||| Sbjct: 43496 actctctgaggcttatgcttcacgctagaaccccacacca 43535 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 381 tttcttaatgatctgaacaacatcctcgtcctcaagctcatgttcct 427 |||||| |||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 43350 tttcttgatgatctggacaacgtcctcatcctcaagctcatgttcct 43396 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 aagcatctttccatgtgttc 134 |||||||||||||||||||| Sbjct: 43066 aagcatctttccatgtgttc 43085
>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H09 Length = 147992 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Plus Query: 478 tatttaaactgtttcgccatgtccttgtggatttggttgcagaagtcttctactgttttc 537 |||||||| |||||| ||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 174 tatttaaattgtttcaccatgtccttgtggattctgttgcagaagtcttccactgttttc 233 Query: 538 ctcttggatgataagatgacaggatcctcgtaatctggg 576 |||| || |||| ||| ||||| ||||| ||||||||| Sbjct: 234 ttcttagaggatacgattacagggtcctcataatctggg 272 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 433 actctctgaggcttgtgcttcacgctagaaccccacacca 472 |||||||||||||| ||||||||||||||||||||||||| Sbjct: 46 actctctgaggcttatgcttcacgctagaaccccacacca 85
>emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 91 Length = 198151 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 385 ttaatgatctgaacaacatcctcgtcctcaagctcatgttcct 427 |||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 91509 ttaacgatctgaacaacatcctcgtcctcaagctcgtgttcct 91551 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 515 tgcagaagtcttctactgttttcctcttggatgataagatgacaggatcctcgtaatc 572 |||||||||| ||||||||| || |||||||||||||||| || ||||| || ||||| Sbjct: 91845 tgcagaagtcctctactgttctcttcttggatgataagattacgggatcatcataatc 91902
>emb|AL078620.2|ATF23K16 Arabidopsis thaliana DNA chromosome 4, BAC clone F23K16 (ESSA project) Length = 129047 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 385 ttaatgatctgaacaacatcctcgtcctcaagctcatgttcct 427 |||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 66295 ttaacgatctgaacaacatcctcgtcctcaagctcgtgttcct 66337 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 515 tgcagaagtcttctactgttttcctcttggatgataagatgacaggatcctcgtaatc 572 |||||||||| ||||||||| || |||||||||||||||| || ||||| || ||||| Sbjct: 66631 tgcagaagtcctctactgttctcttcttggatgataagattacgggatcatcataatc 66688
>gb|AC146748.16| Medicago truncatula clone mth2-65k8, complete sequence Length = 113744 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 381 tttcttaatgatctgaacaacatcctcgtcctcaagctcatgttcct 427 |||||| |||||||||||||| || ||||| ||||| |||||||||| Sbjct: 81777 tttcttgatgatctgaacaacgtcttcgtcttcaagttcatgttcct 81731 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 425 ccttcccgactctctgaggcttgtg 449 |||| |||||||||||||||||||| Sbjct: 81596 ccttgccgactctctgaggcttgtg 81572 Score = 40.1 bits (20), Expect = 7.8 Identities = 74/92 (80%) Strand = Plus / Minus Query: 481 ttaaactgtttcgccatgtccttgtggatttggttgcagaagtcttctactgttttcctc 540 ||||||||||| |||||||||||| || | | |||||| ||||| ||||| ||| || Sbjct: 81017 ttaaactgtttaagcatgtccttgtgaatgcgatcgcagaaatcttcaactgtcttcttc 80958 Query: 541 ttggatgataagatgacaggatcctcgtaatc 572 || ||||| || || ||||| || |||||||| Sbjct: 80957 ttagatgacaatattacagggtcttcgtaatc 80926
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 388 atgatctgaacaacatcctcgtcctcaagctcatgt 423 ||||| |||| ||||||||||||||| ||||||||| Sbjct: 2049450 atgatttgaagaacatcctcgtcctctagctcatgt 2049415
>ref|XM_838539.1| Leishmania major strain Friedlin GTP-binding protein (LMJ_1459) partial mRNA Length = 1125 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 388 atgatctgaacaacatcctcgtcctcaagctcatgt 423 ||||| |||| ||||||||||||||| ||||||||| Sbjct: 1103 atgatttgaagaacatcctcgtcctctagctcatgt 1068
>gb|DQ215860.1| Taeniopygia guttata clone 0063P0006D10 developmentally regulated GTP binding protein 1-like mRNA, complete sequence Length = 1212 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 460 gaaccccacaccagcgcatatttaaa 485 |||||||| ||||||||||||||||| Sbjct: 1099 gaaccccagaccagcgcatatttaaa 1074
>gb|DQ215858.1| Taeniopygia guttata clone 0058P0009E11 developmentally regulated GTP binding protein 1-like mRNA, complete sequence Length = 1184 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 460 gaaccccacaccagcgcatatttaaa 485 |||||||| ||||||||||||||||| Sbjct: 1070 gaaccccagaccagcgcatatttaaa 1045
>gb|DQ215857.1| Taeniopygia guttata clone 0058P0047A05 developmentally regulated GTP binding protein 1-like mRNA, complete sequence Length = 1195 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 460 gaaccccacaccagcgcatatttaaa 485 |||||||| ||||||||||||||||| Sbjct: 1082 gaaccccagaccagcgcatatttaaa 1057
>ref|NM_101609.2| Arabidopsis thaliana ATDRG1 (ARABIDOPSIS THALIANA DEVELOPMENTALLY REGULATED G-PROTEIN 1); GTP binding AT1G17470 (ATDRG1) mRNA, complete cds Length = 1561 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 380 ttttcttaatgatctgaacaacatcctcgtcctcaag 416 ||||||| | ||||||||||||||| ||||| ||||| Sbjct: 1213 ttttcttgacgatctgaacaacatcttcgtcttcaag 1177
>gb|AC104272.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1045_C06, complete sequence Length = 143130 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 505 tggatttggttgcagaagtcttctactgt 533 ||||| ||||||||||||||||| ||||| Sbjct: 48357 tggatatggttgcagaagtcttcaactgt 48329
>gb|AC103576.8| Rattus norvegicus 12 BAC CH230-63N13 (Children's Hospital Oakland Research Institute) complete sequence Length = 219287 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 316 tagctgagagcttcttcctgatctgcaaa 344 ||||||| |||||| |||||||||||||| Sbjct: 214880 tagctgaaagcttcctcctgatctgcaaa 214908
>emb|AL162418.17| Human DNA sequence from clone RP11-335H2 on chromosome 9 Contains part of the gene for a novel protein similar to basonuclin (BNC) (FLJ34928) and a LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae) pseudogene, complete sequence Length = 57850 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 aaccatcttatcaccttctca 106 ||||||||||||||||||||| Sbjct: 19577 aaccatcttatcaccttctca 19597
>gb|AF370258.1| Arabidopsis thaliana putative developmentally regulated GTP-binding protein (At1g17470) mRNA, complete cds Length = 1522 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 380 ttttcttaatgatctgaacaacatcctcgtcctcaag 416 ||||||| | ||||||||||||||| ||||| ||||| Sbjct: 1213 ttttcttgacgatctgaacaacatcttcgtcttcaag 1177
>gb|AC117569.3| Homo sapiens chromosome 18, clone RP11-784B15, complete sequence Length = 176898 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 508 atttggttgcagaagtcttct 528 ||||||||||||||||||||| Sbjct: 65044 atttggttgcagaagtcttct 65064
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 322 agagcttcttcctgatctgca 342 ||||||||||||||||||||| Sbjct: 23489893 agagcttcttcctgatctgca 23489873 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 505 tggatttggttgcagaagtcttctactgt 533 ||||| ||||||||||||||||| ||||| Sbjct: 16835861 tggatatggttgcagaagtcttcaactgt 16835833
>emb|BX815300.1|CNS0ADXZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS4ZH11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1448 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 380 ttttcttaatgatctgaacaacatcctcgtcctcaag 416 ||||||| | ||||||||||||||| ||||| ||||| Sbjct: 1157 ttttcttgacgatctgaacaacatcttcgtcttcaag 1121
>emb|BX815499.1|CNS0ABD6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS67ZF05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 843 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 380 ttttcttaatgatctgaacaacatcctcgtcctcaag 416 ||||||| | ||||||||||||||| ||||| ||||| Sbjct: 569 ttttcttgacgatctgaacaacatcttcgtcttcaag 533
>gb|AC007843.6|AC007843 Arabidopsis thaliana chromosome I BAC F28G4 genomic sequence, complete sequence Length = 84974 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 380 ttttcttaatgatctgaacaacatcctcgtcctcaag 416 ||||||| | ||||||||||||||| ||||| ||||| Sbjct: 9672 ttttcttgacgatctgaacaacatcttcgtcttcaag 9708
>gb|AC022492.5|AC022492 Genomic sequence for Arabidopsis thaliana BAC F1L3 from chromosome I, complete sequence Length = 127968 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 380 ttttcttaatgatctgaacaacatcctcgtcctcaag 416 ||||||| | ||||||||||||||| ||||| ||||| Sbjct: 59686 ttttcttgacgatctgaacaacatcttcgtcttcaag 59650
>dbj|BS000240.1| Pan troglodytes chromosome 22 clone:RP43-055A16, map 22, complete sequences Length = 185079 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 508 atttggttgcagaagtcttct 528 ||||||||||||||||||||| Sbjct: 81095 atttggttgcagaagtcttct 81115
>dbj|AK112055.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-E05, full insert sequence Length = 676 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 505 tggatttggttgcagaagtcttctactgt 533 ||||| ||||||||||||||||| ||||| Sbjct: 559 tggatatggttgcagaagtcttcaactgt 531
>dbj|AK111540.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037H01, full insert sequence Length = 1796 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 505 tggatttggttgcagaagtcttctactgt 533 ||||| ||||||||||||||||| ||||| Sbjct: 1138 tggatatggttgcagaagtcttcaactgt 1110
>dbj|AK105299.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-H10, full insert sequence Length = 1609 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 505 tggatttggttgcagaagtcttctactgt 533 ||||| ||||||||||||||||| ||||| Sbjct: 1166 tggatatggttgcagaagtcttcaactgt 1138
>emb|AL163303.2|HS21C103 Homo sapiens chromosome 21 segment HS21C103 Length = 340000 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 508 atttggttgcagaagtcttct 528 ||||||||||||||||||||| Sbjct: 324016 atttggttgcagaagtcttct 324036
>gb|BT021092.1| Arabidopsis thaliana At1g17470 gene, complete cds Length = 1276 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 380 ttttcttaatgatctgaacaacatcctcgtcctcaag 416 ||||||| | ||||||||||||||| ||||| ||||| Sbjct: 1112 ttttcttgacgatctgaacaacatcttcgtcttcaag 1076
>gb|U66408.1|ATU66408 Arabidopsis thaliana GTP-binding protein (ATDRG1) mRNA, complete cds Length = 1493 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 380 ttttcttaatgatctgaacaacatcctcgtcctcaag 416 ||||||| | ||||||||||||||| ||||| ||||| Sbjct: 1216 ttttcttgacgatctgaacaacatcttcgtcttcaag 1180
>gb|AF014822.1|AF014822 Arabidopsis thaliana developmentally regulated GTP binding protein (AtDRG1) mRNA, complete cds Length = 1495 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 380 ttttcttaatgatctgaacaacatcctcgtcctcaag 416 ||||||| | ||||||||||||||| ||||| ||||| Sbjct: 1202 ttttcttgacgatctgaacaacatcttcgtcttcaag 1166
>gb|AC092203.16| Mus musculus strain C57BL/6J chromosome 3 clone rp23-422n18, complete sequence Length = 188880 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 315 atagctgagagcttcttcctgatctgcaa 343 ||||||||||||| | ||||||||||||| Sbjct: 65272 atagctgagagctacatcctgatctgcaa 65300
>emb|AJ011932.1|HSQ4H9 Homo sapiens chromosome 21q22.3, cosmid clone Q4H9 complete sequence bases 1..41604 Length = 41604 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 508 atttggttgcagaagtcttct 528 ||||||||||||||||||||| Sbjct: 13558 atttggttgcagaagtcttct 13578
>gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0095J22, complete sequence Length = 151730 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 322 agagcttcttcctgatctgca 342 ||||||||||||||||||||| Sbjct: 25617 agagcttcttcctgatctgca 25597
>dbj|AP000468.1| Homo sapiens genomic DNA, chromosome 21q22.3, clone:f60A9, complete sequence Length = 19636 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 508 atttggttgcagaagtcttct 528 ||||||||||||||||||||| Sbjct: 11483 atttggttgcagaagtcttct 11503
>emb|AL672056.4| Mouse DNA sequence from clone RP23-467O2 on chromosome X, complete sequence Length = 150695 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 316 tagctgagagcttcttcctgatctgcaaa 344 |||||||||||| | |||||||||||||| Sbjct: 132249 tagctgagagctacatcctgatctgcaaa 132221
>ref|NM_179119.2| Arabidopsis thaliana WRKY20; transcription factor AT4G26640 (WRKY20) transcript variant AT4G26640.2 mRNA, complete cds Length = 2006 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 ccatagctgagagcttcttc 332 |||||||||||||||||||| Sbjct: 28 ccatagctgagagcttcttc 47
>gb|AC164398.8| Mus musculus chromosome 7, clone RP23-307M24, complete sequence Length = 196756 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 319 ctgagagcttcttcctgatctgca 342 ||||||||| |||||||||||||| Sbjct: 23407 ctgagagctacttcctgatctgca 23430
>ref|XM_877105.1| PREDICTED: Bos taurus similar to developmentally regulated GTP binding protein 1 (predicted), transcript variant 3 (LOC614209), mRNA Length = 1402 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 462 accccacaccagcgcatatttaaa 485 |||||||||||| ||||||||||| Sbjct: 973 accccacaccagagcatatttaaa 950
>ref|XM_865811.1| PREDICTED: Bos taurus similar to developmentally regulated GTP binding protein 1 (predicted), transcript variant 2 (LOC614209), mRNA Length = 1551 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 462 accccacaccagcgcatatttaaa 485 |||||||||||| ||||||||||| Sbjct: 1122 accccacaccagagcatatttaaa 1099
>gb|BC053264.1| Danio rerio developmentally regulated GTP binding protein 1, mRNA (cDNA clone MGC:64124 IMAGE:6795520), complete cds Length = 1527 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 ccccacaccagcgcatattt 482 |||||||||||||||||||| Sbjct: 1132 ccccacaccagcgcatattt 1113
>gb|AC185987.2| Pan troglodytes BAC clone CH251-400P17 from chromosome 9, complete sequence Length = 161307 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 ctactgttttcctcttggat 546 |||||||||||||||||||| Sbjct: 79464 ctactgttttcctcttggat 79445
>gb|AC140073.4| Mus musculus BAC clone RP23-282N20 from chromosome 19, complete sequence Length = 245582 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 316 tagctgagagcttcttcctgatctgcaa 343 |||||||||||| | ||||||||||||| Sbjct: 147154 tagctgagagctacatcctgatctgcaa 147181
>gb|AC183602.2| Pan troglodytes BAC clone CH251-350L8 from chromosome 9, complete sequence Length = 165959 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 ctactgttttcctcttggat 546 |||||||||||||||||||| Sbjct: 91266 ctactgttttcctcttggat 91247
>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete genome Length = 686194 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 agctatattttcttaatgatctga 396 |||||||||||||| ||||||||| Sbjct: 80211 agctatattttctttatgatctga 80234
>emb|CR450685.13| Zebrafish DNA sequence from clone DKEY-83K24 in linkage group 8, complete sequence Length = 195473 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 377 atattttcttaatgatctgaacaa 400 ||||||||| |||||||||||||| Sbjct: 109570 atattttctaaatgatctgaacaa 109593
>gb|AC132116.3| Mus musculus BAC clone RP24-158K7 from chromosome 2, complete sequence Length = 165307 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 316 tagctgagagcttcttcctgatctgcaa 343 |||||||||||| |||| |||||||||| Sbjct: 154121 tagctgagagctacttcttgatctgcaa 154094
>gb|AC127422.4| Mus musculus BAC clone RP24-383K20 from chromosome 9, complete sequence Length = 198803 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 316 tagctgagagcttcttcctgatctgcaa 343 |||||||||||| | ||||||||||||| Sbjct: 174081 tagctgagagctgcatcctgatctgcaa 174108
>emb|CR376783.22| Zebrafish DNA sequence from clone DKEY-41N20 in linkage group 13, complete sequence Length = 205064 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 ttgcaatgtcataagaaccatctt 94 |||||||||||||||||| ||||| Sbjct: 154345 ttgcaatgtcataagaacaatctt 154322
>gb|AC136139.24| Medicago truncatula clone mth2-22c2, complete sequence Length = 66079 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 atctgcaaaacaaaatcatt 355 |||||||||||||||||||| Sbjct: 29795 atctgcaaaacaaaatcatt 29776
>emb|CR788264.3| Human DNA sequence from clone RP11-436G20 on chromosome 9 Contains a pseudogene similar to part of ribosomal protein L7a (RPL7A), complete sequence Length = 171101 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 ctactgttttcctcttggat 546 |||||||||||||||||||| Sbjct: 91246 ctactgttttcctcttggat 91227
>emb|AL772307.15| Human DNA sequence from clone RP11-416B15 on chromosome 9 Contains a pseudogene similar to part of ribosomal protein L7a (RPL7A) and a CpG island, complete sequence Length = 161380 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 ctactgttttcctcttggat 546 |||||||||||||||||||| Sbjct: 10559 ctactgttttcctcttggat 10578
>emb|AL929000.6| Human DNA sequence from clone RP11-451N24 on chromosome 9, complete sequence Length = 64208 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 ctactgttttcctcttggat 546 |||||||||||||||||||| Sbjct: 57733 ctactgttttcctcttggat 57752
>emb|AL591438.6| Human DNA sequence from clone RP11-452D2 on chromosome 9 Contains a pseudogene similar to part of ribosomal protein L7a (RPL7A), a novel pseudogene and a CpG island, complete sequence Length = 176097 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 ctactgttttcctcttggat 546 |||||||||||||||||||| Sbjct: 144077 ctactgttttcctcttggat 144058
>emb|AL590399.4| Human DNA sequence from clone RP11-111F5 on chromosome 9 Contains a pseudogene similar to part of ribosomal protein L7a (RPL7A), four novel genes, a pseudogene similar to part of ribosomal protein L10 (RPL10), a novel pseudogene and a pseudogene similar to part of fibroblast growth factor 7 (keratinocyte growth factor) (FGF7), complete sequence Length = 187505 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 ctactgttttcctcttggat 546 |||||||||||||||||||| Sbjct: 24953 ctactgttttcctcttggat 24934
>gb|AC183767.2| Pan troglodytes BAC clone CH251-373L9 from chromosome 9, complete sequence Length = 162355 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 ctactgttttcctcttggat 546 |||||||||||||||||||| Sbjct: 23693 ctactgttttcctcttggat 23674
>emb|AL049635.8|HSJ1083G3 Human DNA sequence from clone RP5-1083G3 on chromosome 11p13 Contains GSSs and a putative CpG island, complete sequence Length = 98413 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 312 tccatagctgagagcttcttcctg 335 |||| ||||||||||||||||||| Sbjct: 76272 tccagagctgagagcttcttcctg 76295
>ref|XM_775591.1| PREDICTED: Strongylocentrotus purpuratus similar to cytochrome P450, family 4, subfamily v, polypeptide 2 (LOC575176), mRNA Length = 384 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 ctcatgttccttcccgactc 436 |||||||||||||||||||| Sbjct: 153 ctcatgttccttcccgactc 134
>gb|AC183605.3| Pan troglodytes BAC clone CH251-334E18 from chromosome 4, complete sequence Length = 191017 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 ctactgttttcctcttggat 546 |||||||||||||||||||| Sbjct: 107628 ctactgttttcctcttggat 107647
>gb|AC118487.4| Rattus norvegicus 2 BAC CH230-285C2 (Children's Hospital Oakland Research Institute) complete sequence Length = 177865 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 ctcaagctcatgttccttcc 430 |||||||||||||||||||| Sbjct: 8775 ctcaagctcatgttccttcc 8794
>ref|XM_778083.1| PREDICTED: Strongylocentrotus purpuratus similar to cytochrome P450, family 4, subfamily v, polypeptide 2 (LOC577879), mRNA Length = 1617 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 ctcatgttccttcccgactc 436 |||||||||||||||||||| Sbjct: 738 ctcatgttccttcccgactc 719
>gb|AC183610.3| Pan troglodytes BAC clone CH251-223D9 from chromosome 9, complete sequence Length = 159456 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 ctactgttttcctcttggat 546 |||||||||||||||||||| Sbjct: 149998 ctactgttttcctcttggat 149979
>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65 Length = 198320 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ccatagctgagagcttcttc 332 |||||||||||||||||||| Sbjct: 137946 ccatagctgagagcttcttc 137927
>emb|AL078465.1|ATT15N24 Arabidopsis thaliana DNA chromosome 4, BAC clone T15N24 (ESSA project) Length = 92657 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ccatagctgagagcttcttc 332 |||||||||||||||||||| Sbjct: 69814 ccatagctgagagcttcttc 69795
>emb|AJ237705.1|AGA237705 Anopheles gambiae apy gene for putative apyrase protein Length = 3543 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 aaaaactgtccacattctgt 208 |||||||||||||||||||| Sbjct: 3242 aaaaactgtccacattctgt 3223
>emb|AJ237704.1|AGA237704 Anopheles gambiae mRNA for putative apyrase protein Length = 2272 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 aaaaactgtccacattctgt 208 |||||||||||||||||||| Sbjct: 2113 aaaaactgtccacattctgt 2094
>emb|AL773537.4| Human DNA sequence from clone RP11-268E1 on chromosome 9 Contains three novel pseudogene, a novel gene, a pseudogene similar to part ofribosomal protein L10 (QM, NOV, DXS648, DXS648E, FLJ23544) (RPL10) and a CpG island, complete sequence Length = 166231 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 ctactgttttcctcttggat 546 |||||||||||||||||||| Sbjct: 162515 ctactgttttcctcttggat 162534
>gb|AC010052.7| Drosophila melanogaster 3L BAC RP98-5G1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164941 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 atattttcttaatgatctga 396 |||||||||||||||||||| Sbjct: 39892 atattttcttaatgatctga 39911
>gb|AC092709.2| Homo sapiens chromosome 8, clone RP11-509P12, complete sequence Length = 178904 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 tttcttaatgatctgaacaa 400 |||||||||||||||||||| Sbjct: 158811 tttcttaatgatctgaacaa 158830
>gb|AC087368.7| Homo sapiens chromosome 8, clone RP11-711G22, complete sequence Length = 185315 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 tttcttaatgatctgaacaa 400 |||||||||||||||||||| Sbjct: 65839 tttcttaatgatctgaacaa 65858
>gb|AC098860.2| Homo sapiens BAC clone RP11-229G4 from 4, complete sequence Length = 119491 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 ctactgttttcctcttggat 546 |||||||||||||||||||| Sbjct: 69701 ctactgttttcctcttggat 69720
>gb|AC117588.11| Mus musculus chromosome 15, clone RP23-177B8, complete sequence Length = 211177 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 316 tagctgagagcttcttcctgatctgcaaaaca 347 |||||||||||| | ||||||||| ||||||| Sbjct: 156104 tagctgagagctacatcctgatctacaaaaca 156135
>emb|CR382285.2| Human DNA sequence from clone bP-21201H5 on chromosome 21, complete sequence Length = 178865 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 ctactgttttcctcttggat 546 |||||||||||||||||||| Sbjct: 76638 ctactgttttcctcttggat 76619
>gb|BC105158.1| Bos taurus developmentally regulated GTP binding protein 1, mRNA (cDNA clone MGC:127808 IMAGE:30957527), complete cds Length = 1481 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 462 accccacaccagcgcatatttaaa 485 |||||||||||| ||||||||||| Sbjct: 1170 accccacaccagagcatatttaaa 1147
>emb|BX826663.1|CNS0A43T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB52ZA12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1975 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 ccatagctgagagcttcttc 332 |||||||||||||||||||| Sbjct: 20 ccatagctgagagcttcttc 39
>emb|BX827276.1|CNS0A2HA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS31ZF04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2006 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 ccatagctgagagcttcttc 332 |||||||||||||||||||| Sbjct: 27 ccatagctgagagcttcttc 46
>gb|AY224593.1| Danio rerio developmentally regulated GTP-binding protein 1 (drg1) mRNA, complete cds Length = 1517 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 ccccacaccagcgcatattt 482 |||||||||||||||||||| Sbjct: 1144 ccccacaccagcgcatattt 1125
>gb|AC107739.9| Mus musculus chromosome 7, clone RP23-345M1, complete sequence Length = 205227 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 319 ctgagagcttcttcctgatctgca 342 ||||||||| |||||||||||||| Sbjct: 132966 ctgagagctacttcctgatctgca 132989
>gb|AC008262.4|AC008262 Genomic sequence for Arabidopsis thaliana BAC F4N2 from chromosome I, complete sequence Length = 99698 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 gtcttctactgttttcctct 541 |||||||||||||||||||| Sbjct: 51297 gtcttctactgttttcctct 51278
>emb|BX005215.13| Mouse DNA sequence from clone RP23-280F9 on chromosome X, complete sequence Length = 189900 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 agcagtcccatcattaagga 36 |||||||||||||||||||| Sbjct: 72645 agcagtcccatcattaagga 72664
>gb|AC140260.3| Mus musculus BAC clone RP23-311O16 from 6, complete sequence Length = 252791 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 ctactgttttcctcttggat 546 |||||||||||||||||||| Sbjct: 183242 ctactgttttcctcttggat 183261
>emb|AL590148.8| Zebrafish DNA sequence from clone RP71-30I22 in linkage group 8 Contains part of a novel gene for a protein similar to human FLJ12550, the pim1 gene for pim-1 oncogene (proviral integration site 1), part of a novel gene for a protein similar to vertebrate UDP-galactose transporters, a novel gene for a protein similar to vertebrate caldesmon 1 (CALD1) and a CpG island, complete sequence Length = 140984 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 377 atattttcttaatgatctgaacaa 400 ||||||||| |||||||||||||| Sbjct: 56426 atattttctaaatgatctgaacaa 56449
>gb|AF014821.1|AF014821 Pisum sativum developmentally regulated GTP binding protein (PsDRG1) mRNA, complete cds Length = 1482 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 tggttgcagaagtcttctac 530 |||||||||||||||||||| Sbjct: 998 tggttgcagaagtcttctac 979
>gb|AE003549.4| Drosophila melanogaster chromosome 3L, section 36 of 83 of the complete sequence Length = 295143 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 atattttcttaatgatctga 396 |||||||||||||||||||| Sbjct: 271969 atattttcttaatgatctga 271988
>gb|AC145736.4| Mus musculus BAC clone RP24-296K18 from 9, complete sequence Length = 177964 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 316 tagctgagagcttcttcctgatctgcaa 343 |||||||||||| | ||||||||||||| Sbjct: 130209 tagctgagagctgcatcctgatctgcaa 130182
>ref|NM_001034691.1| Bos taurus developmentally regulated GTP binding protein 1 (DRG1), mRNA Length = 1481 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 462 accccacaccagcgcatatttaaa 485 |||||||||||| ||||||||||| Sbjct: 1170 accccacaccagagcatatttaaa 1147
>dbj|AP004950.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT42E10, TM0123, complete sequence Length = 79601 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 376 tatattttcttaatgatctgaaca 399 ||||||||||| |||||||||||| Sbjct: 34900 tatattttcttgatgatctgaaca 34923
>ref|NM_200038.1| Danio rerio developmentally regulated GTP binding protein 1 (drg1), mRNA Length = 1527 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 ccccacaccagcgcatattt 482 |||||||||||||||||||| Sbjct: 1132 ccccacaccagcgcatattt 1113
>emb|AL671520.6| Mouse DNA sequence from clone RP23-99G21 on chromosome 4, complete sequence Length = 213303 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 264 ctagtgaaagaaacacacgagttc 287 ||||||||||||||| |||||||| Sbjct: 48033 ctagtgaaagaaacagacgagttc 48010
>emb|AL772214.3| Mouse DNA sequence from clone RP23-370C18 on chromosome 2, complete sequence Length = 181349 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 316 tagctgagagcttcttcctgatctgcaa 343 |||||||||||| |||| |||||||||| Sbjct: 55961 tagctgagagctacttcttgatctgcaa 55988
>emb|AL365201.14| Human DNA sequence from clone RP11-39C22 on chromosome 9, complete sequence Length = 114026 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 ctactgttttcctcttggat 546 |||||||||||||||||||| Sbjct: 74979 ctactgttttcctcttggat 74998
>emb|AL669891.12| Mouse DNA sequence from clone RP23-271F3 on chromosome X, complete sequence Length = 221898 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 367 gtgtatagctatattttcttaatg 390 |||||||| ||||||||||||||| Sbjct: 54997 gtgtatagatatattttcttaatg 54974
>emb|AL513352.12| Mouse DNA sequence from clone RP23-180L12 on chromosome 15, complete sequence Length = 240977 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 316 tagctgagagcttcttcctgatctgcaa 343 |||||||||||| | ||||||||||||| Sbjct: 46226 tagctgagagctacatcctgatctgcaa 46199
>gb|AC159709.8| Mus musculus 10 BAC RP23-136O17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202716 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 cctcaagctcatgttccttc 429 |||||||||||||||||||| Sbjct: 140726 cctcaagctcatgttccttc 140745 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,544,601 Number of Sequences: 3902068 Number of extensions: 5544601 Number of successful extensions: 100645 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 100359 Number of HSP's gapped (non-prelim): 285 length of query: 576 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 553 effective length of database: 17,143,297,704 effective search space: 9480243630312 effective search space used: 9480243630312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)