ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63i19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY106414.1| Zea mays PCO109372 mRNA sequence 278 1e-71
2ref|XM_463952.1| Oryza sativa (japonica cultivar-group), mRNA 256 5e-65
3dbj|AK101889.1| Oryza sativa (japonica cultivar-group) cDNA clon... 256 5e-65
4gb|BT024115.1| Zea mays clone EL01N0513A07 mRNA sequence 254 2e-64
5gb|AY108671.1| Zea mays PCO109373 mRNA sequence 246 5e-62
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
7dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
8dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
9gb|AC136679.19| Medicago truncatula clone mth2-22c4, complete se... 78 3e-11
10ref|NM_117417.2| Arabidopsis thaliana hydro-lyase/ lyase AT4G134... 64 4e-07
11gb|AY117151.1| Arabidopsis thaliana unknown protein (At4g13430) ... 64 4e-07
12gb|AY045842.1| Arabidopsis thaliana unknown protein (At4g13430) ... 64 4e-07
13emb|AL161536.2|ATCHRIV36 Arabidopsis thaliana DNA chromosome 4, ... 62 2e-06
14emb|AL049608.1|ATT9E8 Arabidopsis thaliana DNA chromosome 4, BAC... 62 2e-06
15gb|AC147572.4| Pan troglodytes BAC clone CH251-412D24 from Y, co... 44 0.39
16gb|AC147608.1| Pan troglodytes BAC clone CH251-506P22 from Y, co... 44 0.39
17gb|AC146198.2| Pan troglodytes BAC clone CH251-475M5 from Y, com... 44 0.39
18gb|AC147361.1| Pan troglodytes BAC clone CH251-528H6 from Y, com... 44 0.39
19gb|AC147114.2| Pan troglodytes BAC clone CH251-548O14 from Y, co... 44 0.39
20gb|AC146515.2| Pan troglodytes BAC clone CH251-113M4 from Y, com... 44 0.39
21gb|AC142348.1| Pan troglodytes BAC clone RP43-5I10 from Y, compl... 44 0.39
22dbj|BS000677.1| Pan troglodytes chromosome Y clone: PTB-391J06, ... 44 0.39
23gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 44 0.39
24gb|AC016637.7| Homo sapiens chromosome 5 clone RP11-34J15, compl... 44 0.39
25gb|AC151800.2| Pan troglodytes BAC clone CH251-261E10 from chrom... 44 0.39
26gb|AC148933.3| Pan troglodytes BAC clone CH251-571K7 from chromo... 44 0.39
27gb|AC007359.3|AC007359 Homo sapiens BAC clone RP11-66M18 from Y,... 44 0.39
28gb|AC016752.2|AC016752 Homo sapiens BAC clone RP11-506M9 from Y,... 44 0.39
29gb|AC008175.2|AC008175 Homo sapiens BAC clone RP11-427G18 from Y... 44 0.39
30gb|AC007965.3|AC007965 Homo sapiens BAC clone RP11-245K4 from Y,... 44 0.39
31ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P... 44 0.39
32gb|AC087101.2| Rattus norvegicus strain Brown Norway clone RP31-... 42 1.5
33gb|AC087042.2| Rattus norvegicus strain Brown Norway clone RP31-... 42 1.5
34emb|AL354760.11| Human DNA sequence from clone RP4-671G15 on chr... 42 1.5
35gb|AC096070.7| Rattus norvegicus 4 BAC CH230-20J7 (Children's Ho... 42 1.5
36gb|DQ397595.1| Cenarchaeum symbiosum clone C03F09, complete sequ... 42 1.5
37gb|DQ397590.1| Cenarchaeum symbiosum clone C01G02, complete sequ... 42 1.5
38gb|DQ397541.1| Cenarchaeum symbiosum clone C01B03, complete sequ... 42 1.5
39emb|CR610673.1| full-length cDNA clone CS0DF023YJ10 of Fetal bra... 42 1.5
40gb|AC144807.23| Medicago truncatula clone mth2-9j13, complete se... 42 1.5
41gb|AC097261.6| Homo sapiens X BAC RP11-109P4 (Roswell Park Cance... 42 1.5
42gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold 42 1.5
43emb|BX294378.5| Mouse DNA sequence from clone RP23-457B12 on chr... 42 1.5
44emb|AL928926.9| Mouse DNA sequence from clone RP23-443G7 on chro... 42 1.5
45gb|AC123647.9| Mus musculus chromosome 3, clone RP23-105J10, com... 40 6.1
46gb|AC010577.5| Drosophila melanogaster clone BACR22J20, complete... 40 6.1
47gb|AC010838.12| Drosophila melanogaster clone BACR13D24, complet... 40 6.1
48ref|NG_004832.1| Homo sapiens chromosome Y inverted repeat IR2, ... 40 6.1
49emb|BX927290.22| Zebrafish DNA sequence from clone CH211-212K5 i... 40 6.1
50gb|AC125039.4| Mus musculus BAC clone RP23-335C3 from chromosome... 40 6.1
51gb|AC165179.2| Zea mays clone ZMMBBb-37E5, complete sequence 40 6.1
52emb|AL441884.5| Human DNA sequence from clone RP11-19A22 on chro... 40 6.1
53gb|AC092554.3| Papio anubis clone RP41-414G17, complete sequence 40 6.1
54emb|BX324172.22| Zebrafish DNA sequence from clone DKEYP-86D6 in... 40 6.1
55gb|BC053990.1| Homo sapiens pleckstrin homology domain containin... 40 6.1
56emb|AL589738.6| Mouse DNA sequence from clone RP23-322J11 on chr... 40 6.1
57emb|CR598838.1| full-length cDNA clone CS0DI010YD20 of Placenta ... 40 6.1
58dbj|AK023180.1| Homo sapiens cDNA FLJ13118 fis, clone NT2RP30026... 40 6.1
59dbj|AP008980.1| Terrabacter sp. DBF63 plasmid pDBF1 genes, compl... 40 6.1
60ref|NM_079895.2| Drosophila melanogaster Retinoid- and fatty-aci... 40 6.1
61gb|AC098616.2| Homo sapiens chromosome 3 clone RP11-279I18, comp... 40 6.1
62gb|AC092503.2| Homo sapiens chromosome 3 clone RP11-539L2, compl... 40 6.1
63emb|BX088654.11| Zebrafish DNA sequence from clone CH211-195H6 i... 40 6.1
64gb|AC090056.2|AC090056 Oryza sativa chromosome 9 clone PAC0663H0... 40 6.1
65gb|AC154002.8| Mus musculus 6 BAC RP24-239G21 (Roswell Park Canc... 40 6.1
66dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
67gb|AC021107.3|AC021107 Homo sapiens BAC clone RP11-178M5 from Y,... 40 6.1
68gb|AC009952.4|AC009952 Homo sapiens BAC clone RP11-175I4 from Y,... 40 6.1
69gb|AC007285.3|AC007285 Homo sapiens BAC clone RP11-576P10 from 7... 40 6.1
70dbj|AP006758.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
71dbj|AP005562.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
72emb|AL929152.24| Zebrafish DNA sequence from clone CH211-59L24, ... 40 6.1
73emb|CR388135.16| Zebrafish DNA sequence from clone CH211-152C12 ... 40 6.1
74gb|AE003846.5| Drosophila melanogaster chromosome 4, section 5 o... 40 6.1
75emb|CR548631.18| Zebrafish DNA sequence from clone CH211-117I20 ... 40 6.1
76gb|U62892.1|DMU62892 Drosophila melanogaster retinoid- and fatty... 40 6.1
77gb|AC115888.10| Mus musculus chromosome 3, clone RP24-399D16, co... 40 6.1
78emb|AL805901.6| Mouse DNA sequence from clone RP23-24K4 on chrom... 40 6.1 
>gb|AY106414.1| Zea mays PCO109372 mRNA sequence
          Length = 1863

 Score =  278 bits (140), Expect = 1e-71
 Identities = 200/220 (90%)
 Strand = Plus / Minus

                                                                        
Query: 231  aggaagtctctggggtctgtgacatatcccgtcaacgccgaggccgccgcagtgaaggga 290
            |||||||| |||||||| || ||||| |||||||  || ||||| ||||||||| |||||
Sbjct: 1588 aggaagtccctggggtccgtaacataccccgtcagggctgaggcagccgcagtgtaggga 1529

                                                                        
Query: 291  gaagccaggtagatctgcccttccttgtggcccatcctgcccgggaagttcctgttcgtc 350
            || ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| 
Sbjct: 1528 gacgccaggtagatttgcccttccttgtggcccatcctgcccggaaagttcctgttcgtg 1469

                                                                        
Query: 351  gttgatacacagaccgtaggttcattcatccgtgcatatgtatcacgaggaccacccaaa 410
            || || || ||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1468 gtggacacgcagacagtaggttcattcatccgtgcatatgtatcacgagggccacccaaa 1409

                                                    
Query: 411  caagcaccacaattaggactagctggtgtatcacaaccag 450
            |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 1408 caagcaccacaattaggacttgctggtgtgtcacaaccag 1369
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>ref|XM_463952.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1802

 Score =  256 bits (129), Expect = 5e-65
 Identities = 198/221 (89%)
 Strand = Plus / Minus

                                                                        
Query: 230  caggaagtctctggggtctgtgacatatcccgtcaacgccgaggccgccgcagtgaaggg 289
            ||||||||| |||||||| ||||| ||||| || |  || || |||||||| ||||| ||
Sbjct: 1592 caggaagtccctggggtcagtgacgtatccggtgagggctgaagccgccgcggtgaacgg 1533

                                                                        
Query: 290  agaagccaggtagatctgcccttccttgtggcccatcctgcccgggaagttcctgttcgt 349
             ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||
Sbjct: 1532 cgaagccaggtagatctgcccttccttgtgccccatcctgccggggaaattcctgttcgt 1473

                                                                        
Query: 350  cgttgatacacagaccgtaggttcattcatccgtgcatatgtatcacgaggaccacccaa 409
            ||| || ||||| ||| ||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 1472 cgtcgacacacacaccataggttcattcatgcgagcatatgtatcacgaggaccacccaa 1413

                                                     
Query: 410  acaagcaccacaattaggactagctggtgtatcacaaccag 450
            ||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 1412 acaagcaccacaactagggctagctggtgtatcacaaccag 1372
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>dbj|AK101889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070M16, full
            insert sequence
          Length = 1802

 Score =  256 bits (129), Expect = 5e-65
 Identities = 198/221 (89%)
 Strand = Plus / Minus

                                                                        
Query: 230  caggaagtctctggggtctgtgacatatcccgtcaacgccgaggccgccgcagtgaaggg 289
            ||||||||| |||||||| ||||| ||||| || |  || || |||||||| ||||| ||
Sbjct: 1592 caggaagtccctggggtcagtgacgtatccggtgagggctgaagccgccgcggtgaacgg 1533

                                                                        
Query: 290  agaagccaggtagatctgcccttccttgtggcccatcctgcccgggaagttcctgttcgt 349
             ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||
Sbjct: 1532 cgaagccaggtagatctgcccttccttgtgccccatcctgccggggaaattcctgttcgt 1473

                                                                        
Query: 350  cgttgatacacagaccgtaggttcattcatccgtgcatatgtatcacgaggaccacccaa 409
            ||| || ||||| ||| ||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 1472 cgtcgacacacacaccataggttcattcatgcgagcatatgtatcacgaggaccacccaa 1413

                                                     
Query: 410  acaagcaccacaattaggactagctggtgtatcacaaccag 450
            ||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 1412 acaagcaccacaactagggctagctggtgtatcacaaccag 1372
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>gb|BT024115.1| Zea mays clone EL01N0513A07 mRNA sequence
          Length = 1781

 Score =  254 bits (128), Expect = 2e-64
 Identities = 197/220 (89%)
 Strand = Plus / Minus

                                                                        
Query: 231  aggaagtctctggggtctgtgacatatcccgtcaacgccgaggccgccgcagtgaaggga 290
            |||||||| |||||||| || ||||| |||||||  || ||||| ||||||||| |||||
Sbjct: 1639 aggaagtccctggggtccgtaacataccccgtcagggctgaggcagccgcagtgtaggga 1580

                                                                        
Query: 291  gaagccaggtagatctgcccttccttgtggcccatcctgcccgggaagttcctgttcgtc 350
            || ||||||||||   | |||||||||||||||||||||||||| |||||||||||||| 
Sbjct: 1579 gacgccaggtagagggggccttccttgtggcccatcctgcccggaaagttcctgttcgtg 1520

                                                                        
Query: 351  gttgatacacagaccgtaggttcattcatccgtgcatatgtatcacgaggaccacccaaa 410
            || || || ||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1519 gtggacacgcagacagtaggttcattcatccgtgcatatgtatcacgagggccacccaaa 1460

                                                    
Query: 411  caagcaccacaattaggactagctggtgtatcacaaccag 450
            |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 1459 caagcaccacaattaggacttgctggtgtgtcacaaccag 1420
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>gb|AY108671.1| Zea mays PCO109373 mRNA sequence
          Length = 1642

 Score =  246 bits (124), Expect = 5e-62
 Identities = 196/220 (89%)
 Strand = Plus / Minus

                                                                        
Query: 231  aggaagtctctggggtctgtgacatatcccgtcaacgccgaggccgccgcagtgaaggga 290
            |||||||| |||||||| ||||| || |||||||  |||||||| || || ||| |||| 
Sbjct: 1280 aggaagtccctggggtccgtgacgtaccccgtcagggccgaggctgcagcggtgtagggg 1221

                                                                        
Query: 291  gaagccaggtagatctgcccttccttgtggcccatcctgcccgggaagttcctgttcgtc 350
            || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| 
Sbjct: 1220 gacgccaggtagatctgcccttccttgtgccccatcctgcccgggaagttcctgttcgtg 1161

                                                                        
Query: 351  gttgatacacagaccgtaggttcattcatccgtgcatatgtatcacgaggaccacccaaa 410
            || || || ||||||||||||||||||||||||||||| ||||| ||||| ||||||| |
Sbjct: 1160 gtggacacgcagaccgtaggttcattcatccgtgcatacgtatcgcgagggccacccaga 1101

                                                    
Query: 411  caagcaccacaattaggactagctggtgtatcacaaccag 450
            ||||| || ||||||||||| |||||||||||||||||||
Sbjct: 1100 caagcgccgcaattaggacttgctggtgtatcacaaccag 1061
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  135 bits (68), Expect = 1e-28
 Identities = 80/84 (95%)
 Strand = Plus / Plus

                                                                           
Query: 367     taggttcattcatccgtgcatatgtatcacgaggaccacccaaacaagcaccacaattag 426
               ||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1305679 taggttcattcatgcgagcatatgtatcacgaggaccacccaaacaagcaccacaactag 1305738

                                       
Query: 427     gactagctggtgtatcacaaccag 450
               | ||||||||||||||||||||||
Sbjct: 1305739 ggctagctggtgtatcacaaccag 1305762



 Score =  127 bits (64), Expect = 3e-26
 Identities = 115/132 (87%)
 Strand = Plus / Plus

                                                                           
Query: 230     caggaagtctctggggtctgtgacatatcccgtcaacgccgaggccgccgcagtgaaggg 289
               ||||||||| |||||||| ||||| ||||| || |  || || |||||||| ||||| ||
Sbjct: 1305115 caggaagtccctggggtcagtgacgtatccggtgagggctgaagccgccgcggtgaacgg 1305174

                                                                           
Query: 290     agaagccaggtagatctgcccttccttgtggcccatcctgcccgggaagttcctgttcgt 349
                ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||
Sbjct: 1305175 cgaagccaggtagatctgcccttccttgtgccccatcctgccggggaaattcctgttcgt 1305234

                           
Query: 350     cgttgatacaca 361
               ||| || |||||
Sbjct: 1305235 cgtcgacacaca 1305246
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>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0575F10
          Length = 150462

 Score =  135 bits (68), Expect = 1e-28
 Identities = 80/84 (95%)
 Strand = Plus / Plus

                                                                          
Query: 367    taggttcattcatccgtgcatatgtatcacgaggaccacccaaacaagcaccacaattag 426
              ||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 136770 taggttcattcatgcgagcatatgtatcacgaggaccacccaaacaagcaccacaactag 136829

                                      
Query: 427    gactagctggtgtatcacaaccag 450
              | ||||||||||||||||||||||
Sbjct: 136830 ggctagctggtgtatcacaaccag 136853



 Score =  127 bits (64), Expect = 3e-26
 Identities = 115/132 (87%)
 Strand = Plus / Plus

                                                                          
Query: 230    caggaagtctctggggtctgtgacatatcccgtcaacgccgaggccgccgcagtgaaggg 289
              ||||||||| |||||||| ||||| ||||| || |  || || |||||||| ||||| ||
Sbjct: 136206 caggaagtccctggggtcagtgacgtatccggtgagggctgaagccgccgcggtgaacgg 136265

                                                                          
Query: 290    agaagccaggtagatctgcccttccttgtggcccatcctgcccgggaagttcctgttcgt 349
               ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||
Sbjct: 136266 cgaagccaggtagatctgcccttccttgtgccccatcctgccggggaaattcctgttcgt 136325

                          
Query: 350    cgttgatacaca 361
              ||| || |||||
Sbjct: 136326 cgtcgacacaca 136337
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>dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0018H03, complete sequence
          Length = 94450

 Score =  135 bits (68), Expect = 1e-28
 Identities = 80/84 (95%)
 Strand = Plus / Plus

                                                                         
Query: 367   taggttcattcatccgtgcatatgtatcacgaggaccacccaaacaagcaccacaattag 426
             ||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 79708 taggttcattcatgcgagcatatgtatcacgaggaccacccaaacaagcaccacaactag 79767

                                     
Query: 427   gactagctggtgtatcacaaccag 450
             | ||||||||||||||||||||||
Sbjct: 79768 ggctagctggtgtatcacaaccag 79791



 Score =  127 bits (64), Expect = 3e-26
 Identities = 115/132 (87%)
 Strand = Plus / Plus

                                                                         
Query: 230   caggaagtctctggggtctgtgacatatcccgtcaacgccgaggccgccgcagtgaaggg 289
             ||||||||| |||||||| ||||| ||||| || |  || || |||||||| ||||| ||
Sbjct: 79144 caggaagtccctggggtcagtgacgtatccggtgagggctgaagccgccgcggtgaacgg 79203

                                                                         
Query: 290   agaagccaggtagatctgcccttccttgtggcccatcctgcccgggaagttcctgttcgt 349
              ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||
Sbjct: 79204 cgaagccaggtagatctgcccttccttgtgccccatcctgccggggaaattcctgttcgt 79263

                         
Query: 350   cgttgatacaca 361
             ||| || |||||
Sbjct: 79264 cgtcgacacaca 79275
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>gb|AC136679.19| Medicago truncatula clone mth2-22c4, complete sequence
          Length = 101649

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                         
Query: 368   aggttcattcatccgtgcatatgtatcacgaggaccacccaaacaagcaccacaattagg 427
             |||||||||||| || ||||| |||||    || ||||||||||||||||||||| ||||
Sbjct: 84664 aggttcattcatgcgggcataagtatctttcgggccacccaaacaagcaccacaactagg 84605

                                    
Query: 428   actagctggtgtatcacaaccag 450
             |||||| ||||| ||||||||||
Sbjct: 84604 actagcaggtgtgtcacaaccag 84582
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>ref|NM_117417.2| Arabidopsis thaliana hydro-lyase/ lyase AT4G13430 mRNA, complete cds
          Length = 1871

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 92/112 (82%)
 Strand = Plus / Minus

                                                                        
Query: 267  gccgaggccgccgcagtgaagggagaagccaggtagatctgcccttccttgtggcccatc 326
            |||||||| || |||||| | ||||| || | ||| || |||||||| ||||| ||||||
Sbjct: 1567 gccgaggctgcagcagtgtaaggagacgctaagtaaatttgcccttctttgtgtcccatc 1508

                                                                
Query: 327  ctgcccgggaagttcctgttcgtcgttgatacacagaccgtaggttcattca 378
            |  || |||||||||||||| |||||||| ||||| ||   |||||||||||
Sbjct: 1507 cgaccggggaagttcctgtttgtcgttgagacacacacttgaggttcattca 1456
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>gb|AY117151.1| Arabidopsis thaliana unknown protein (At4g13430) mRNA, complete cds
          Length = 1561

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 92/112 (82%)
 Strand = Plus / Minus

                                                                        
Query: 267  gccgaggccgccgcagtgaagggagaagccaggtagatctgcccttccttgtggcccatc 326
            |||||||| || |||||| | ||||| || | ||| || |||||||| ||||| ||||||
Sbjct: 1487 gccgaggctgcagcagtgtaaggagacgctaagtaaatttgcccttctttgtgtcccatc 1428

                                                                
Query: 327  ctgcccgggaagttcctgttcgtcgttgatacacagaccgtaggttcattca 378
            |  || |||||||||||||| |||||||| ||||| ||   |||||||||||
Sbjct: 1427 cgaccggggaagttcctgtttgtcgttgagacacacacttgaggttcattca 1376
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>gb|AY045842.1| Arabidopsis thaliana unknown protein (At4g13430) mRNA, complete cds
          Length = 1808

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 92/112 (82%)
 Strand = Plus / Minus

                                                                        
Query: 267  gccgaggccgccgcagtgaagggagaagccaggtagatctgcccttccttgtggcccatc 326
            |||||||| || |||||| | ||||| || | ||| || |||||||| ||||| ||||||
Sbjct: 1556 gccgaggctgcagcagtgtaaggagacgctaagtaaatttgcccttctttgtgtcccatc 1497

                                                                
Query: 327  ctgcccgggaagttcctgttcgtcgttgatacacagaccgtaggttcattca 378
            |  || |||||||||||||| |||||||| ||||| ||   |||||||||||
Sbjct: 1496 cgaccggggaagttcctgtttgtcgttgagacacacacttgaggttcattca 1445
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>emb|AL161536.2|ATCHRIV36 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 36
          Length = 199634

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Plus

                                                                         
Query: 267   gccgaggccgccgcagtgaagggagaagccaggtagatctgcccttccttgtggcccatc 326
             |||||||| || |||||| | ||||| || | ||| || |||||||| ||||| ||||||
Sbjct: 90978 gccgaggctgcagcagtgtaaggagacgctaagtaaatttgcccttctttgtgtcccatc 91037

                                                
Query: 327   ctgcccgggaagttcctgttcgtcgttgatacaca 361
             |  || |||||||||||||| |||||||| |||||
Sbjct: 91038 cgaccggggaagttcctgtttgtcgttgagacaca 91072
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>emb|AL049608.1|ATT9E8 Arabidopsis thaliana DNA chromosome 4, BAC clone T9E8, partial sequence
             (ESSA project)
          Length = 95432

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Plus

                                                                         
Query: 267   gccgaggccgccgcagtgaagggagaagccaggtagatctgcccttccttgtggcccatc 326
             |||||||| || |||||| | ||||| || | ||| || |||||||| ||||| ||||||
Sbjct: 74999 gccgaggctgcagcagtgtaaggagacgctaagtaaatttgcccttctttgtgtcccatc 75058

                                                
Query: 327   ctgcccgggaagttcctgttcgtcgttgatacaca 361
             |  || |||||||||||||| |||||||| |||||
Sbjct: 75059 cgaccggggaagttcctgtttgtcgttgagacaca 75093
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>gb|AC147572.4| Pan troglodytes BAC clone CH251-412D24 from Y, complete sequence
          Length = 166356

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 128   gacacacacacagaaatctaaa 149
             ||||||||||||||||||||||
Sbjct: 94563 gacacacacacagaaatctaaa 94584
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>gb|AC147608.1| Pan troglodytes BAC clone CH251-506P22 from Y, complete sequence
          Length = 195158

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 128   gacacacacacagaaatctaaa 149
             ||||||||||||||||||||||
Sbjct: 57910 gacacacacacagaaatctaaa 57889
to top
>gb|AC146198.2| Pan troglodytes BAC clone CH251-475M5 from Y, complete sequence
          Length = 220557

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 128    gacacacacacagaaatctaaa 149
              ||||||||||||||||||||||
Sbjct: 215118 gacacacacacagaaatctaaa 215097
to top
>gb|AC147361.1| Pan troglodytes BAC clone CH251-528H6 from Y, complete sequence
          Length = 169760

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 128  gacacacacacagaaatctaaa 149
            ||||||||||||||||||||||
Sbjct: 5429 gacacacacacagaaatctaaa 5450
to top
>gb|AC147114.2| Pan troglodytes BAC clone CH251-548O14 from Y, complete sequence
          Length = 229006

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 128   gacacacacacagaaatctaaa 149
             ||||||||||||||||||||||
Sbjct: 30570 gacacacacacagaaatctaaa 30591
to top
>gb|AC146515.2| Pan troglodytes BAC clone CH251-113M4 from Y, complete sequence
          Length = 183460

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 128    gacacacacacagaaatctaaa 149
              ||||||||||||||||||||||
Sbjct: 109619 gacacacacacagaaatctaaa 109598
to top
>gb|AC142348.1| Pan troglodytes BAC clone RP43-5I10 from Y, complete sequence
          Length = 183293

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 128    gacacacacacagaaatctaaa 149
              ||||||||||||||||||||||
Sbjct: 137584 gacacacacacagaaatctaaa 137605
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>dbj|BS000677.1| Pan troglodytes chromosome Y clone: PTB-391J06, complete sequence
          Length = 171013

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 128   gacacacacacagaaatctaaa 149
             ||||||||||||||||||||||
Sbjct: 99406 gacacacacacagaaatctaaa 99385
to top
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 128      gacacacacacagaaatctaaa 149
                ||||||||||||||||||||||
Sbjct: 11527399 gacacacacacagaaatctaaa 11527378



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 128      gacacacacacagaaatctaaa 149
                ||||||||||||||||||||||
Sbjct: 10658047 gacacacacacagaaatctaaa 10658068



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 128     gacacacacacagaaatctaaa 149
               ||||||||||||||||||||||
Sbjct: 3628940 gacacacacacagaaatctaaa 3628919



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 128     gacacacacacagaaatctaaa 149
               ||||||||||||||||||||||
Sbjct: 2689281 gacacacacacagaaatctaaa 2689302
to top
>gb|AC016637.7| Homo sapiens chromosome 5 clone RP11-34J15, complete sequence
          Length = 173317

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 129   acacacacacagaaatctaaac 150
             ||||||||||||||||||||||
Sbjct: 11869 acacacacacagaaatctaaac 11848
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>gb|AC151800.2| Pan troglodytes BAC clone CH251-261E10 from chromosome y, complete
            sequence
          Length = 149719

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 128  gacacacacacagaaatctaaa 149
            ||||||||||||||||||||||
Sbjct: 7817 gacacacacacagaaatctaaa 7796
to top
>gb|AC148933.3| Pan troglodytes BAC clone CH251-571K7 from chromosome y, complete
              sequence
          Length = 171231

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 128    gacacacacacagaaatctaaa 149
              ||||||||||||||||||||||
Sbjct: 138190 gacacacacacagaaatctaaa 138211
to top
>gb|AC007359.3|AC007359 Homo sapiens BAC clone RP11-66M18 from Y, complete sequence
          Length = 100627

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 128  gacacacacacagaaatctaaa 149
            ||||||||||||||||||||||
Sbjct: 3616 gacacacacacagaaatctaaa 3595
to top
>gb|AC016752.2|AC016752 Homo sapiens BAC clone RP11-506M9 from Y, complete sequence
          Length = 166436

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 128   gacacacacacagaaatctaaa 149
             ||||||||||||||||||||||
Sbjct: 42703 gacacacacacagaaatctaaa 42682
to top
>gb|AC008175.2|AC008175 Homo sapiens BAC clone RP11-427G18 from Y, complete sequence
          Length = 205237

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 128    gacacacacacagaaatctaaa 149
              ||||||||||||||||||||||
Sbjct: 100702 gacacacacacagaaatctaaa 100723
to top
>gb|AC007965.3|AC007965 Homo sapiens BAC clone RP11-245K4 from Y, complete sequence
          Length = 182083

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 128    gacacacacacagaaatctaaa 149
              ||||||||||||||||||||||
Sbjct: 137296 gacacacacacagaaatctaaa 137317
to top
>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2
               (P1-P2-P3-IR2@) on chromosome Y
          Length = 4538292

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 128     gacacacacacagaaatctaaa 149
               ||||||||||||||||||||||
Sbjct: 4214191 gacacacacacagaaatctaaa 4214212



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 128     gacacacacacagaaatctaaa 149
               ||||||||||||||||||||||
Sbjct: 1834115 gacacacacacagaaatctaaa 1834094



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 128    gacacacacacagaaatctaaa 149
              ||||||||||||||||||||||
Sbjct: 739797 gacacacacacagaaatctaaa 739818



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 128    gacacacacacagaaatctaaa 149
              ||||||||||||||||||||||
Sbjct: 224826 gacacacacacagaaatctaaa 224805
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>gb|AC087101.2| Rattus norvegicus strain Brown Norway clone RP31-230B14, complete
            sequence
          Length = 27615

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 132  cacacacagaaatctaaacta 152
            |||||||||||||||||||||
Sbjct: 3487 cacacacagaaatctaaacta 3507
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>gb|AC087042.2| Rattus norvegicus strain Brown Norway clone RP31-314L24, complete
              sequence
          Length = 110542

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 132    cacacacagaaatctaaacta 152
              |||||||||||||||||||||
Sbjct: 109979 cacacacagaaatctaaacta 109999
to top
>emb|AL354760.11| Human DNA sequence from clone RP4-671G15 on chromosome 1p13.1-13.3
             Contains the 3' end of the gene for a novel protein, the
             5' end of the WNT2B gene for wingless-type MMTV
             integration site family, member 2B and a CpG island,
             complete sequence
          Length = 111977

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 60    gaaaaagcatacaacaaaacc 80
             |||||||||||||||||||||
Sbjct: 92365 gaaaaagcatacaacaaaacc 92385
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>gb|AC096070.7| Rattus norvegicus 4 BAC CH230-20J7 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 231332

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 132   cacacacagaaatctaaacta 152
             |||||||||||||||||||||
Sbjct: 77853 cacacacagaaatctaaacta 77833
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>gb|DQ397595.1| Cenarchaeum symbiosum clone C03F09, complete sequence
          Length = 39172

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 320   gcccatcctgcccgggaagttcctgttcgtcgt 352
             |||||||||||| || ||||||||||| |||||
Sbjct: 18822 gcccatcctgccgggaaagttcctgttggtcgt 18854
to top
>gb|DQ397590.1| Cenarchaeum symbiosum clone C01G02, complete sequence
          Length = 39399

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 320  gcccatcctgcccgggaagttcctgttcgtcgt 352
            |||||||||||| || ||||||||||| |||||
Sbjct: 7856 gcccatcctgccgggaaagttcctgttggtcgt 7824
to top
>gb|DQ397541.1| Cenarchaeum symbiosum clone C01B03, complete sequence
          Length = 43871

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 320   gcccatcctgcccgggaagttcctgttcgtcgt 352
             |||||||||||| || ||||||||||| |||||
Sbjct: 29651 gcccatcctgccgggaaagttcctgttggtcgt 29619
to top
>emb|CR610673.1| full-length cDNA clone CS0DF023YJ10 of Fetal brain of Homo sapiens
           (human)
          Length = 1261

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 60  gaaaaagcatacaacaaaacc 80
           |||||||||||||||||||||
Sbjct: 504 gaaaaagcatacaacaaaacc 524
to top
>gb|AC144807.23| Medicago truncatula clone mth2-9j13, complete sequence
          Length = 115904

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                              
Query: 402   ccacccaaacaagcaccacaattaggactagctggtgtatcacaaccag 450
             ||||||| ||| ||| ||||| ||||||| || |||| |||||||||||
Sbjct: 54121 ccacccatacatgcagcacaactaggacttgcaggtggatcacaaccag 54073
to top
>gb|AC097261.6| Homo sapiens X BAC RP11-109P4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 97628

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 129   acacacacacagaaatctaaa 149
             |||||||||||||||||||||
Sbjct: 87283 acacacacacagaaatctaaa 87263
to top
>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 132    cacacacagaaatctaaacta 152
              |||||||||||||||||||||
Sbjct: 570553 cacacacagaaatctaaacta 570573
to top
>emb|BX294378.5| Mouse DNA sequence from clone RP23-457B12 on chromosome 2, complete
            sequence
          Length = 10516

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 129  acacacacacagaaatctaaa 149
            |||||||||||||||||||||
Sbjct: 8603 acacacacacagaaatctaaa 8623
to top
>emb|AL928926.9| Mouse DNA sequence from clone RP23-443G7 on chromosome 2, complete
           sequence
          Length = 211456

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 129 acacacacacagaaatctaaa 149
           |||||||||||||||||||||
Sbjct: 87  acacacacacagaaatctaaa 107
to top
>gb|AC123647.9| Mus musculus chromosome 3, clone RP23-105J10, complete sequence
          Length = 202415

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 135    acacagaaatctaaactaca 154
              ||||||||||||||||||||
Sbjct: 199134 acacagaaatctaaactaca 199115
to top
>gb|AC010577.5| Drosophila melanogaster clone BACR22J20, complete sequence
          Length = 152661

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 232    ggaagtctctggggtctgtg 251
              ||||||||||||||||||||
Sbjct: 114003 ggaagtctctggggtctgtg 114022
to top
>gb|AC010838.12| Drosophila melanogaster clone BACR13D24, complete sequence
          Length = 156843

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 232    ggaagtctctggggtctgtg 251
              ||||||||||||||||||||
Sbjct: 143603 ggaagtctctggggtctgtg 143584
to top
>ref|NG_004832.1| Homo sapiens chromosome Y inverted repeat IR2, centromeric (IR2@) on
              chromosome Y
          Length = 389013

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    gacacacacacagaaatcta 147
              ||||||||||||||||||||
Sbjct: 313491 gacacacacacagaaatcta 313510
to top
>emb|BX927290.22| Zebrafish DNA sequence from clone CH211-212K5 in linkage group 14,
              complete sequence
          Length = 222032

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      aacaatgttctttgtgccag 26
              ||||||||||||||||||||
Sbjct: 105424 aacaatgttctttgtgccag 105443
to top
>gb|AC125039.4| Mus musculus BAC clone RP23-335C3 from chromosome 6, complete
            sequence
          Length = 222535

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 129  acacacacacagaaatctaaacta 152
            ||||||||||| ||||||||||||
Sbjct: 2167 acacacacacacaaatctaaacta 2190
to top
>gb|AC165179.2| Zea mays clone ZMMBBb-37E5, complete sequence
          Length = 134893

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     taccaatgaaaaagcataca 72
              ||||||||||||||||||||
Sbjct: 104487 taccaatgaaaaagcataca 104506
to top
>emb|AL441884.5| Human DNA sequence from clone RP11-19A22 on chromosome 9 Contains part
             of a variant of the PTPRD gene for protein tyrosine
             phosphatase, receptor type, D (HPTP, PTPD, HPTPD),
             complete sequence
          Length = 137783

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    gaaaaagcatacaacaaaac 79
             ||||||||||||||||||||
Sbjct: 51422 gaaaaagcatacaacaaaac 51441
to top
>gb|AC092554.3| Papio anubis clone RP41-414G17, complete sequence
          Length = 167543

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   cgccgaggccgccgcagtga 285
             ||||||||||||||||||||
Sbjct: 34121 cgccgaggccgccgcagtga 34140
to top
>emb|BX324172.22| Zebrafish DNA sequence from clone DKEYP-86D6 in linkage group 13,
             complete sequence
          Length = 184555

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     aacaatgttctttgtgccag 26
             ||||||||||||||||||||
Sbjct: 18237 aacaatgttctttgtgccag 18256
to top
>gb|BC053990.1| Homo sapiens pleckstrin homology domain containing, family A
           (phosphoinositide binding specific) member 8, mRNA (cDNA
           clone MGC:59711 IMAGE:5922853), complete cds
          Length = 1928

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 cgccgaggccgccgcagtga 285
           ||||||||||||||||||||
Sbjct: 143 cgccgaggccgccgcagtga 162
to top
>emb|AL589738.6| Mouse DNA sequence from clone RP23-322J11 on chromosome 13 Contains the
              Foxq1 gene for forkhead box Q1 (Hfh1l), two novel genes and
              two CpG islands, complete sequence
          Length = 187709

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     taccaatgaaaaagcataca 72
              ||||||||||||||||||||
Sbjct: 175672 taccaatgaaaaagcataca 175691
to top
>emb|CR598838.1| full-length cDNA clone CS0DI010YD20 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 2101

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 cgccgaggccgccgcagtga 285
           ||||||||||||||||||||
Sbjct: 206 cgccgaggccgccgcagtga 225
to top
>dbj|AK023180.1| Homo sapiens cDNA FLJ13118 fis, clone NT2RP3002663, highly similar
           to Homo sapiens putative glycolipid transfer protein
           mRNA
          Length = 2836

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 cgccgaggccgccgcagtga 285
           ||||||||||||||||||||
Sbjct: 127 cgccgaggccgccgcagtga 146
to top
>dbj|AP008980.1| Terrabacter sp. DBF63 plasmid pDBF1 genes, complete and partial cds
          Length = 70631

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   acgccgaggccgccgcagtg 284
             ||||||||||||||||||||
Sbjct: 35119 acgccgaggccgccgcagtg 35100
to top
>ref|NM_079895.2| Drosophila melanogaster Retinoid- and fatty-acid binding protein
            CG11064-RA (RfaBp), mRNA
          Length = 10281

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 232  ggaagtctctggggtctgtg 251
            ||||||||||||||||||||
Sbjct: 8154 ggaagtctctggggtctgtg 8135
to top
>gb|AC098616.2| Homo sapiens chromosome 3 clone RP11-279I18, complete sequence
          Length = 159629

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   acacacacacagaaatctaa 148
             ||||||||||||||||||||
Sbjct: 91114 acacacacacagaaatctaa 91133
to top
>gb|AC092503.2| Homo sapiens chromosome 3 clone RP11-539L2, complete sequence
          Length = 195568

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   acacacacacagaaatctaa 148
             ||||||||||||||||||||
Sbjct: 34832 acacacacacagaaatctaa 34851
to top
>emb|BX088654.11| Zebrafish DNA sequence from clone CH211-195H6 in linkage group 15,
             complete sequence
          Length = 205794

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   acacacacacagaaatctaa 148
             ||||||||||||||||||||
Sbjct: 23835 acacacacacagaaatctaa 23854
to top
>gb|AC090056.2|AC090056 Oryza sativa chromosome 9 clone PAC0663H05, complete sequence
          Length = 161873

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 338    gttcctgttcgtcgttgata 357
              ||||||||||||||||||||
Sbjct: 148653 gttcctgttcgtcgttgata 148634
to top
>gb|AC154002.8| Mus musculus 6 BAC RP24-239G21 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 188768

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 129    acacacacacagaaatctaaacta 152
              ||||||||||| ||||||||||||
Sbjct: 119070 acacacacacacaaatctaaacta 119093
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 338     gttcctgttcgtcgttgata 357
               ||||||||||||||||||||
Sbjct: 6281250 gttcctgttcgtcgttgata 6281269
to top
>gb|AC021107.3|AC021107 Homo sapiens BAC clone RP11-178M5 from Y, complete sequence
          Length = 160601

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   gacacacacacagaaatcta 147
             ||||||||||||||||||||
Sbjct: 45210 gacacacacacagaaatcta 45229
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>gb|AC009952.4|AC009952 Homo sapiens BAC clone RP11-175I4 from Y, complete sequence
          Length = 148058

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    gacacacacacagaaatcta 147
              ||||||||||||||||||||
Sbjct: 112316 gacacacacacagaaatcta 112297
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>gb|AC007285.3|AC007285 Homo sapiens BAC clone RP11-576P10 from 7p11.2-p21, complete sequence
          Length = 140619

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   cgccgaggccgccgcagtga 285
             ||||||||||||||||||||
Sbjct: 66920 cgccgaggccgccgcagtga 66939
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>dbj|AP006758.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0663H05
          Length = 161938

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 338   gttcctgttcgtcgttgata 357
             ||||||||||||||||||||
Sbjct: 13529 gttcctgttcgtcgttgata 13548
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>dbj|AP005562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1190_B07
          Length = 140200

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 338    gttcctgttcgtcgttgata 357
              ||||||||||||||||||||
Sbjct: 126533 gttcctgttcgtcgttgata 126552
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>emb|AL929152.24| Zebrafish DNA sequence from clone CH211-59L24, complete sequence
          Length = 172954

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     aacaatgttctttgtgccag 26
             ||||||||||||||||||||
Sbjct: 82842 aacaatgttctttgtgccag 82823
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>emb|CR388135.16| Zebrafish DNA sequence from clone CH211-152C12 in linkage group 19,
              complete sequence
          Length = 159848

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    acacacacacagaaatctaa 148
              ||||||||||||||||||||
Sbjct: 150950 acacacacacagaaatctaa 150969
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>gb|AE003846.5| Drosophila melanogaster chromosome 4, section 5 of 5 of the complete
              sequence
          Length = 356494

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 232    ggaagtctctggggtctgtg 251
              ||||||||||||||||||||
Sbjct: 169068 ggaagtctctggggtctgtg 169049
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>emb|CR548631.18| Zebrafish DNA sequence from clone CH211-117I20 in linkage group 6,
             complete sequence
          Length = 169904

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   aagtctctggggtctgtgac 253
             ||||||||||||||||||||
Sbjct: 69941 aagtctctggggtctgtgac 69960
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>gb|U62892.1|DMU62892 Drosophila melanogaster retinoid- and fatty acid-binding glycoprotein
            mRNA, complete cds
          Length = 10281

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 232  ggaagtctctggggtctgtg 251
            ||||||||||||||||||||
Sbjct: 8154 ggaagtctctggggtctgtg 8135
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>gb|AC115888.10| Mus musculus chromosome 3, clone RP24-399D16, complete sequence
          Length = 142265

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   acacagaaatctaaactaca 154
             ||||||||||||||||||||
Sbjct: 11272 acacagaaatctaaactaca 11253
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>emb|AL805901.6| Mouse DNA sequence from clone RP23-24K4 on chromosome X, complete
              sequence
          Length = 243012

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    acacacacacagaaatctaa 148
              ||||||||||||||||||||
Sbjct: 134571 acacacacacagaaatctaa 134552


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,716,853
Number of Sequences: 3902068
Number of extensions: 13716853
Number of successful extensions: 96452
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96109
Number of HSP's gapped (non-prelim): 342
length of query: 450
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 428
effective length of database: 17,147,199,772
effective search space: 7339001502416
effective search space used: 7339001502416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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