>CWC15_EMENI (Q5B020) Pre-mRNA-splicing factor cwc15|
          Length = 232

 Score = 55.8 bits (133), Expect = 4e-08
 Identities = 25/39 (64%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
 Frame = -2

Query: 420 DDVVFKNQARG-ETKTPKRFINDTIRSDFHRKFLHRYMK 307
           DDVVFKNQARG E K  K F+ND +RSDFH+KF+ +Y++
Sbjct: 194 DDVVFKNQARGTEDKRGKEFVNDLLRSDFHKKFMSKYVR 232

>CWC15_YARLI (Q6C0E6) Pre-mRNA-splicing factor CWC15|
          Length = 215

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 19/38 (50%), Positives = 30/38 (78%)
 Frame = -2

Query: 420 DDVVFKNQARGETKTPKRFINDTIRSDFHRKFLHRYMK 307
           +DVVF+NQ + + +    ++ND IRSDFHRKF++RY++
Sbjct: 179 EDVVFRNQTK-QARKEDSYVNDLIRSDFHRKFMNRYVR 215

>CWC15_SCHPO (P78794) Pre-mRNA-splicing factor cwc15 (Complexed with cdc5|
           protein 15) (Cell cycle control protein cwf15)
          Length = 265

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 19/38 (50%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
 Frame = -2

Query: 420 DDVVFKNQARGETKTPKR-FINDTIRSDFHRKFLHRYM 310
           +DVVF+N  +G   TP+  F+ND +RS+FH+KFL R++
Sbjct: 227 EDVVFRNTHKGVDDTPRPGFVNDMLRSEFHKKFLARFV 264

>CWC15_DEBHA (Q6BP48) Pre-mRNA-splicing factor CWC15|
          Length = 226

 Score = 35.0 bits (79), Expect = 0.072
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 420 DDVVFKNQARGETKTPKRFINDTIRSDFHRKFLHRYMK 307
           D   FK Q        + F NDT+ S+FH+ FL +Y++
Sbjct: 189 DSTAFKKQNSQNKNDDETFTNDTLNSEFHQNFLTKYIR 226

>CWC15_CANGA (Q6FVL2) Pre-mRNA-splicing factor CWC15|
          Length = 143

 Score = 34.7 bits (78), Expect = 0.094
 Identities = 13/29 (44%), Positives = 22/29 (75%)
 Frame = -2

Query: 393 RGETKTPKRFINDTIRSDFHRKFLHRYMK 307
           R +   P++F NDT+RS  H++FL+R++K
Sbjct: 115 RKKVVKPEKFTNDTVRSQKHKEFLNRFVK 143

>HIS5_CLOAB (Q97KI0) Imidazole glycerol phosphate synthase subunit hisH (EC|
           2.4.2.-) (IGP synthase glutamine amidotransferase
           subunit) (IGP synthase subunit hisH) (ImGP synthase
           subunit hisH) (IGPS subunit hisH)
          Length = 203

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = +1

Query: 112 GHSKASVIYKQWVLFCTLRNRVNISSY---DNKDITVMSYKSMFGIQKH 249
           G SK S +Y     +  L ++ N+++Y     K   V+SYK++FGIQ H
Sbjct: 136 GVSKGSYVYFVHSYYAELADKNNLNAYCDYGTKLPAVVSYKNIFGIQFH 184

>CWC15_YEAST (Q03772) Pre-mRNA-splicing factor CWC15 (Complexed with CEF1|
           protein 15)
          Length = 175

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 9/25 (36%), Positives = 20/25 (80%)
 Frame = -2

Query: 381 KTPKRFINDTIRSDFHRKFLHRYMK 307
           K+   +IND  +S++H++FLH++++
Sbjct: 151 KSASGYINDMTKSEYHQEFLHKHVR 175

>ENP1_BOVIN (O18956) Ectonucleoside triphosphate diphosphohydrolase 1 (EC|
           3.6.1.5) (NTPDase1) (Ecto-ATP diphosphohydrolase)
           (ATPDase) (Lymphoid cell activation antigen) (CD39
           antigen) (Ecto-apyrase)
          Length = 513

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
 Frame = +1

Query: 94  VIERSWGHSKASVIYKQWVL---FCTLRNRVNISSYDNKDITVMSYKSMFGI-QKHHRLF 261
           +I     HS+     K  VL   FCT R+ +N S Y   DI +    +     Q   +LF
Sbjct: 276 IIHEPCFHSRYMRKIKMSVLNEGFCTKRHELNSSFYPLVDIEIRGAGNFQRCRQSIIQLF 335

Query: 262 QHAYCPYN 285
             +YCPY+
Sbjct: 336 NTSYCPYS 343

>ZN683_HUMAN (Q8IZ20) Zinc finger protein 683|
          Length = 509

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 388 RDQDTETVHQRHHQK*FPPQVSA*VHEMMLLYALCCMDSMHAG 260
           R + T+ +H + H +   PQ    VH  + L +L C+   H G
Sbjct: 417 RSRFTQHIHLKLHHRLHAPQPCGLVHTQLPLASLACLAQWHQG 459

>HRCA_CHLMU (P54306) Heat-inducible transcription repressor hrcA|
          Length = 392

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 19/60 (31%), Positives = 27/60 (45%)
 Frame = -3

Query: 248 CFCIPNIDLYDITVISLLSYDDMFTLFLRVQKRTHCLYITDALL*PQDLSITSIYYLNSF 69
           CF  P  +   +T I L+S DD+  +F  V         TD L  P+ L   S+  + SF
Sbjct: 137 CFSSPRFESDSVTNIQLVSIDDLRVVF--VLSTEFGQLFTDVLWLPEQLPENSLKRIESF 194


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,043,007
Number of Sequences: 219361
Number of extensions: 1182287
Number of successful extensions: 2372
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2369
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)