ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah63i04 |
|---|---|
| Clone Library Name | barley_pub |
>PMA1_WHEAT (P83970) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)| Length = 951 Score = 192 bits (489), Expect = 5e-49 Identities = 96/96 (100%), Positives = 96/96 (100%) Frame = -3 Query: 585 NKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRR 406 NKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRR Sbjct: 856 NKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRR 915 Query: 405 AEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 298 AEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV Sbjct: 916 AEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 951
>PMA4_NICPL (Q03194) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4)| Length = 952 Score = 154 bits (390), Expect = 1e-37 Identities = 79/96 (82%), Positives = 88/96 (91%) Frame = -3 Query: 585 NKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRR 406 NKTAFTTK++YGK EREAQWA AQRTLHGLQ PE + LFN+K+SYRELSEIAEQAKRR Sbjct: 859 NKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEATN--LFNEKNSYRELSEIAEQAKRR 916 Query: 405 AEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 298 AE+ARLREL+TLKGHVESVVKLKGLDI+TI Q+YTV Sbjct: 917 AEMARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 952
>PMA5_ARATH (Q9SJB3) ATPase 5, plasma membrane-type (EC 3.6.3.6) (Proton pump 5)| Length = 948 Score = 150 bits (378), Expect = 3e-36 Identities = 75/96 (78%), Positives = 85/96 (88%) Frame = -3 Query: 585 NKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRR 406 NKTAFTTK++YGK EREAQWA AQRTLHGLQ E + +FN+K+SY ELS+IAEQAKRR Sbjct: 855 NKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAE--KNNIFNEKNSYSELSQIAEQAKRR 912 Query: 405 AEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 298 AE+ RLRE+NTLKGHVESVVKLKGLDIDTI Q+YTV Sbjct: 913 AEVVRLREINTLKGHVESVVKLKGLDIDTIQQHYTV 948
>PMA6_ARATH (Q9SH76) ATPase 6, plasma membrane-type (EC 3.6.3.6) (Proton pump 6)| Length = 949 Score = 145 bits (367), Expect = 6e-35 Identities = 71/96 (73%), Positives = 86/96 (89%) Frame = -3 Query: 585 NKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRR 406 N+TAFTTK++YG+GEREAQWA AQRTLHGL+ PE ++F D ++Y ELSEIAEQAK+R Sbjct: 858 NRTAFTTKKDYGRGEREAQWALAQRTLHGLKPPE----SMFEDTATYTELSEIAEQAKKR 913 Query: 405 AEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 298 AE+ARLRE++TLKGHVESVVKLKGLDID +NQ+YTV Sbjct: 914 AEVARLREVHTLKGHVESVVKLKGLDIDNLNQHYTV 949
>PMA9_ARATH (Q42556) ATPase 9, plasma membrane-type (EC 3.6.3.6) (Proton pump 9)| Length = 954 Score = 144 bits (364), Expect = 1e-34 Identities = 72/96 (75%), Positives = 85/96 (88%) Frame = -3 Query: 585 NKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRR 406 NKTAFT+K++YGKGEREAQWA AQRTLHGLQ + + +FNDKS+YRELSEIA+QAKRR Sbjct: 861 NKTAFTSKKDYGKGEREAQWAQAQRTLHGLQPAQTSD--MFNDKSTYRELSEIADQAKRR 918 Query: 405 AEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 298 AE+ARLRE +TLKGHVESVVK KGLDI+ I Q+YT+ Sbjct: 919 AEVARLRERHTLKGHVESVVKQKGLDIEAIQQHYTL 954
>PMA1_ARATH (P20649) ATPase 1, plasma membrane-type (EC 3.6.3.6) (Proton pump 1)| Length = 948 Score = 143 bits (361), Expect = 3e-34 Identities = 74/96 (77%), Positives = 82/96 (85%) Frame = -3 Query: 585 NKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRR 406 N+TAFTTK++YG GEREAQWA AQRTLHGLQ E + +F +K SYRELSEIAEQAKRR Sbjct: 855 NRTAFTTKKDYGIGEREAQWAQAQRTLHGLQPKEDVN--IFPEKGSYRELSEIAEQAKRR 912 Query: 405 AEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 298 AEIARLREL+TLKGHVESV KLKGLDIDT +YTV Sbjct: 913 AEIARLRELHTLKGHVESVAKLKGLDIDTAGHHYTV 948
>PMA8_ARATH (Q9M2A0) ATPase 8, plasma membrane-type (EC 3.6.3.6) (Proton pump 8)| Length = 948 Score = 142 bits (358), Expect = 7e-34 Identities = 75/95 (78%), Positives = 82/95 (86%) Frame = -3 Query: 582 KTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 403 KTAFTTK++YGKGEREAQWA AQRTLHGL PE +FND + ELSEIAEQAKRRA Sbjct: 860 KTAFTTKKDYGKGEREAQWALAQRTLHGLPPPE----AMFNDNKN--ELSEIAEQAKRRA 913 Query: 402 EIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 298 E+ARLREL+TLKGHVESVVKLKGLDIDTI Q+YTV Sbjct: 914 EVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948
>PMA2_ARATH (P19456) ATPase 2, plasma membrane-type (EC 3.6.3.6) (Proton pump 2)| Length = 947 Score = 137 bits (345), Expect = 2e-32 Identities = 74/96 (77%), Positives = 82/96 (85%) Frame = -3 Query: 585 NKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRR 406 NKTAFT K++YGK EREAQWA AQRTLHGLQ E + +F +K SYRELSEIAEQAKRR Sbjct: 855 NKTAFTMKKDYGKEEREAQWALAQRTLHGLQPKEAVN--IFPEKGSYRELSEIAEQAKRR 912 Query: 405 AEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 298 AEIARLREL+TLKGHVESVVKLKGLDI+T +YTV Sbjct: 913 AEIARLRELHTLKGHVESVVKLKGLDIET-PSHYTV 947
>PMA3_ARATH (P20431) ATPase 3, plasma membrane-type (EC 3.6.3.6) (Proton pump 3)| Length = 948 Score = 131 bits (329), Expect = 2e-30 Identities = 71/96 (73%), Positives = 80/96 (83%) Frame = -3 Query: 585 NKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRR 406 N+TAFTTK+NYG EREAQWA AQRTLHGLQ E A+ + ++ YRELSEIA QAKRR Sbjct: 856 NRTAFTTKQNYGIEEREAQWAHAQRTLHGLQNTETAN--VVPERGGYRELSEIANQAKRR 913 Query: 405 AEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 298 AEIARLREL+TLKGHVESVVKLKGLDI+T +YTV Sbjct: 914 AEIARLRELHTLKGHVESVVKLKGLDIETAG-HYTV 948
>PMA3_NICPL (Q08436) Plasma membrane ATPase 3 (EC 3.6.3.6) (Proton pump 3)| Length = 956 Score = 129 bits (323), Expect = 8e-30 Identities = 63/95 (66%), Positives = 81/95 (85%) Frame = -3 Query: 582 KTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 403 + AFT K+++GK +RE QWA AQRTLHGLQ P+P +F++ +++ EL+++AE+AKRRA Sbjct: 865 RIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDPK---IFSETTNFNELNQLAEEAKRRA 921 Query: 402 EIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 298 EIARLREL+TLKGHVESVVKLKGLDI+TI Q YTV Sbjct: 922 EIARLRELHTLKGHVESVVKLKGLDIETIQQAYTV 956
>PMA1_LYCES (P22180) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)| Length = 956 Score = 128 bits (321), Expect = 1e-29 Identities = 63/95 (66%), Positives = 81/95 (85%) Frame = -3 Query: 582 KTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 403 + AFT K+++GK RE QWA AQRTLHGLQ P+P +F++ +++ EL+++AE+AKRRA Sbjct: 865 RIAFTRKKDFGKELRELQWAHAQRTLHGLQVPDPK---IFSETTNFNELNQLAEEAKRRA 921 Query: 402 EIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 298 EIARLREL+TLKGHVESVVKLKGLDI+TI Q+YTV Sbjct: 922 EIARLRELHTLKGHVESVVKLKGLDIETIQQSYTV 956
>PMA1_NICPL (Q08435) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)| Length = 957 Score = 126 bits (317), Expect = 4e-29 Identities = 63/95 (66%), Positives = 80/95 (84%) Frame = -3 Query: 582 KTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 403 + AFT K+++GK +RE QWA AQRTLHGLQ P+ LF++ +++ EL+++AE+AKRRA Sbjct: 866 RIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDTK---LFSEATNFNELNQLAEEAKRRA 922 Query: 402 EIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 298 EIARLREL+TLKGHVESVVKLKGLDI+TI Q YTV Sbjct: 923 EIARLRELHTLKGHVESVVKLKGLDIETIQQAYTV 957
>PMA11_ARATH (Q9LV11) ATPase 11, plasma membrane-type (EC 3.6.3.6) (Proton pump| 11) Length = 956 Score = 125 bits (313), Expect = 1e-28 Identities = 62/95 (65%), Positives = 80/95 (84%) Frame = -3 Query: 582 KTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 403 + AFT ++++GK +RE QWA AQRTLHGLQAP+ +F +++ + ELS++AE+AKRRA Sbjct: 865 RVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAK---MFPERTHFNELSQMAEEAKRRA 921 Query: 402 EIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 298 EIARLREL+TLKGHVESVV+LKGLDI+TI Q YTV Sbjct: 922 EIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 956
>PMA2_LYCES (P23980) Plasma membrane ATPase 2 (EC 3.6.3.6) (Proton pump 2)| (Fragment) Length = 704 Score = 124 bits (312), Expect = 2e-28 Identities = 62/95 (65%), Positives = 80/95 (84%) Frame = -3 Query: 582 KTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 403 + AFT K+++GK +RE QWA AQRTLHGLQ P+ LF++ +++ EL+++AE+AKRRA Sbjct: 613 RIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDIK---LFSEATNFNELNQLAEEAKRRA 669 Query: 402 EIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 298 EIAR REL+TLKGHVESVVKLKGLDI+TI Q+YTV Sbjct: 670 EIARQRELHTLKGHVESVVKLKGLDIETIQQSYTV 704
>PMA4_ARATH (Q9SU58) ATPase 4, plasma membrane-type (EC 3.6.3.6) (Proton pump 4)| Length = 960 Score = 124 bits (311), Expect = 2e-28 Identities = 62/95 (65%), Positives = 79/95 (83%) Frame = -3 Query: 582 KTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 403 + AFT ++++GK +RE QWA AQRTLHGLQAP+ +F D++ EL+++AE+AKRRA Sbjct: 869 RVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDTK---MFTDRTHVSELNQMAEEAKRRA 925 Query: 402 EIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 298 EIARLREL+TLKGHVESVV+LKGLDI+TI Q YTV Sbjct: 926 EIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 960
>PMA7_ARATH (Q9LY32) ATPase 7, plasma membrane-type (EC 3.6.3.6) (Proton pump 7)| Length = 961 Score = 94.4 bits (233), Expect = 2e-19 Identities = 50/96 (52%), Positives = 68/96 (70%), Gaps = 1/96 (1%) Frame = -3 Query: 582 KTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 403 +TA T K+N+G+ ER A WAT +RT HGL+ + + +++S EL+ +AE+AKRRA Sbjct: 870 RTALTGKKNFGQEERMAAWATEKRTQHGLETGQKPVY----ERNSATELNNMAEEAKRRA 925 Query: 402 EIARLRELNTLKGHVESVVKLKGLDIDTIN-QNYTV 298 EIAR+REL TLKG VES KLKG D++ N NYT+ Sbjct: 926 EIARMRELQTLKGKVESAAKLKGYDLEDPNSNNYTI 961
>PMA10_ARATH (Q43128) ATPase 10, plasma membrane-type (EC 3.6.3.6) (Proton pump| 10) Length = 947 Score = 59.7 bits (143), Expect = 6e-09 Identities = 38/95 (40%), Positives = 53/95 (55%) Frame = -3 Query: 582 KTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 403 KTAFT K++YGK + +QR S + + S S IAEQ +RRA Sbjct: 864 KTAFTYKKDYGKDDGSPNVTISQR-----------SRSAEELRGSRSRASWIAEQTRRRA 912 Query: 402 EIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 298 EIARL E++++ H+ESV+KLK +D I +TV Sbjct: 913 EIARLLEVHSVSRHLESVIKLKQIDQRMIRAAHTV 947
>CING_HUMAN (Q9P2M7) Cingulin| Length = 1197 Score = 43.9 bits (102), Expect = 3e-04 Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 3/81 (3%) Frame = -3 Query: 537 EAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAE---IARLRELNTLK 367 E Q Q L +Q PEPA L D REL E + K+R E R REL LK Sbjct: 436 ETQVMELQNKLKHVQGPEPAKEVLLKDLLETRELLEEVLEGKQRVEEQLRLRERELTALK 495 Query: 366 GHVESVVKLKGLDIDTINQNY 304 G ++ V + +++ + Q Y Sbjct: 496 GALKEEVASRDQEVEHVRQQY 516
>PMA_AVESA (Q7M290) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)| (Fragments) Length = 110 Score = 43.9 bits (102), Expect = 3e-04 Identities = 26/38 (68%), Positives = 27/38 (71%) Frame = -3 Query: 525 ATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAK 412 A A +TLHGLQAPE S L NDK ELSEIAEQAK Sbjct: 77 APALKTLHGLQAPESTSLNLPNDK----ELSEIAEQAK 110
>CING_MOUSE (P59242) Cingulin| Length = 1191 Score = 34.3 bits (77), Expect = 0.27 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Frame = -3 Query: 537 EAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAE---IARLRELNTLK 367 EAQ Q L Q+P+ +L D REL E + K+R E R REL LK Sbjct: 430 EAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALK 489 Query: 366 GHVESVVKLKGLDIDTINQNY 304 G ++ V +++ + Y Sbjct: 490 GALKEEVASHDQEVEHVRLQY 510
>VE2_HPV08 (P06422) Regulatory protein E2| Length = 498 Score = 32.0 bits (71), Expect = 1.4 Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 3/91 (3%) Frame = -1 Query: 569 PPKRTTAKVRGRHSGLPHREHSMAFKHLSRLPTHSSTTRAAT-VSSLRSLSKPREELRLQ 393 P RT + R S HR S + + LSR+ STT + + SSL +PR R + Sbjct: 252 PSSRTRPQKEQRRSRSRHRTRSRS-RSLSRVRAVGSTTVSRSRSSSLTKAVRPRSRSRSR 310 Query: 392 G*GSSTHSR--GTLSPW*SSRALTSTPSTKT 306 G ++T R G SP R+ + +PST T Sbjct: 311 GRATATSRRRAGRGSPR-RRRSTSRSPSTNT 340
>ESC1_SCHPO (Q04635) Protein esc1| Length = 413 Score = 31.2 bits (69), Expect = 2.3 Identities = 27/90 (30%), Positives = 40/90 (44%) Frame = -1 Query: 569 PPKRTTAKVRGRHSGLPHREHSMAFKHLSRLPTHSSTTRAATVSSLRSLSKPREELRLQG 390 P TT++ +HS +PHR L+ T SS+T VSS S+S Sbjct: 126 PTNSTTSQASAKHSAVPHRSSQFQSTTLTPSTTDSSST---DVSSSDSVSTS-------- 174 Query: 389 *GSSTHSRGTLSPW*SSRALTSTPSTKTTP 300 SS+++ T+S +TS S+ TP Sbjct: 175 -ASSSNASNTVS-------VTSPASSSATP 196
>ASPP2_HUMAN (Q13625) Apoptosis-stimulating of p53 protein 2 (Tumor suppressor| p53-binding protein 2) (p53-binding protein 2) (p53BP2) (53BP2) (Bcl2-binding protein) (Bbp) (NY-REN-51 antigen) Length = 1128 Score = 30.4 bits (67), Expect = 4.0 Identities = 20/72 (27%), Positives = 34/72 (47%) Frame = -3 Query: 525 ATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVV 346 AT ++ L L+ + ++ + L EIAE + A+L+++ LKGHVE Sbjct: 150 ATKEQRLKFLKQQDQRQQQQVAEQEKLKRLKEIAENQE-----AKLKKVRALKGHVEQKR 204 Query: 345 KLKGLDIDTINQ 310 G ++ I Q Sbjct: 205 LSNGKLVEEIEQ 216
>GCM2_MOUSE (O09102) Chorion-specific transcription factor GCMb (Glial cells| missing homolog 2) (GCM motif protein 2) (mGCMb) Length = 504 Score = 30.0 bits (66), Expect = 5.2 Identities = 15/61 (24%), Positives = 28/61 (45%) Frame = -3 Query: 507 LHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLD 328 +H PE S T + R+++ + KRR+E R ++GH+ S L+ + Sbjct: 156 VHDHPRPESKSETEGRRSALKRQMASFYQPQKRRSEEPEARSTQDIRGHLNSTAALEPTE 215 Query: 327 I 325 + Sbjct: 216 L 216
>SMG_DROME (Q23972) Protein Smaug| Length = 999 Score = 30.0 bits (66), Expect = 5.2 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -2 Query: 313 PKLHRVRNLGIGPNNMTSVLERDWNG 236 PK+H V+ G+GPNN ++ + WNG Sbjct: 769 PKMHHVKPAGVGPNN-GNINKPRWNG 793
>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 221 Score = 30.0 bits (66), Expect = 5.2 Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 6/93 (6%) Frame = -1 Query: 569 PPKRTTAKVRGRHSGLPHREHSMAFKHLSRLPTHS------STTRAATVSSLRSLSKPRE 408 PP+R + GR S P R + SR + S S +R+ T S RS SK R Sbjct: 106 PPRRYGSSGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRS 165 Query: 407 ELRLQG*GSSTHSRGTLSPW*SSRALTSTPSTK 309 R + SS+ SR SR+ + P++K Sbjct: 166 ARRSKS-KSSSVSRSRSRSRSRSRSRSPPPTSK 197
>SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 29.6 bits (65), Expect = 6.7 Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 6/96 (6%) Frame = -1 Query: 569 PPKRTTAKVRGRHSGLPHREHSMAFKHLSRLPTHS------STTRAATVSSLRSLSKPRE 408 PP+R GR S P R + SR + S S +R+ T S RS SK R Sbjct: 105 PPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRS 164 Query: 407 ELRLQG*GSSTHSRGTLSPW*SSRALTSTPSTKTTP 300 R + SS+ SR SR+ + P +K P Sbjct: 165 ARRSKS-KSSSVSRSRSRSRSRSRSRSPPPVSKREP 199
>RSRC1_MOUSE (Q9DBU6) Arginine/serine-rich coiled coil protein 1| Length = 334 Score = 29.6 bits (65), Expect = 6.7 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Frame = -3 Query: 552 GKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYREL-SEIAEQAKRRAEIARLRELN 376 GK R + + RT P P SH+ +++SS+R S ++ +R+ RE Sbjct: 91 GKPYRVQRSRSKSRTRRSRSRPRPRSHSRSSERSSHRRTRSRSRDRDRRKVRDKEKREKE 150 Query: 375 TLKGHVESVVKLKGLDIDTI 316 KG + V +K D I Sbjct: 151 KDKGKDKEVHSIKRGDSGNI 170
>TIM_MOUSE (Q9R1X4) Timeless homolog (mTim)| Length = 1197 Score = 29.6 bits (65), Expect = 6.7 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 5/47 (10%) Frame = -2 Query: 355 VRGEAQGP*HRHHQPKLH-----RVRNLGIGPNNMTSVLERDWNGAP 230 V GE QGP H L R R G+GP + E +WN AP Sbjct: 1112 VPGE-QGPSEEHRTEALRALLSARKRKAGLGPTEEEATGEEEWNSAP 1157
>BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 828 Score = 29.6 bits (65), Expect = 6.7 Identities = 20/75 (26%), Positives = 35/75 (46%) Frame = -3 Query: 570 TTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIAR 391 T KE Y K ++++W + T++ L+ +L S + + E+A ++ A Sbjct: 439 TVKEEYNKTVKQSEWDEMKATVNTLR-------SLNKTMKSQMQRMKDREKASQKEHSAV 491 Query: 390 LRELNTLKGHVESVV 346 EL TLK +E V Sbjct: 492 KTELKTLKDQLEKSV 506
>ASPP2_MOUSE (Q8CG79) Apoptosis-stimulating of p53 protein 2 (Tumor suppressor| p53-binding protein 2) (p53BP2) (53BP2) (Fragment) Length = 1088 Score = 29.6 bits (65), Expect = 6.7 Identities = 20/72 (27%), Positives = 34/72 (47%) Frame = -3 Query: 525 ATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVV 346 AT ++ L L+ + ++ + L EIAE + A+L+++ LKGHVE Sbjct: 110 ATKEQRLKFLKQQDQRQQQQAAEQEKLKRLREIAESQE-----AKLKKVRALKGHVEQKR 164 Query: 345 KLKGLDIDTINQ 310 G ++ I Q Sbjct: 165 LSNGKLVEEIEQ 176 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,464,358 Number of Sequences: 219361 Number of extensions: 1742944 Number of successful extensions: 4431 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 4299 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4412 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
