Clone Name | rbah63h24 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PANB_METCA (Q605H0) 3-methyl-2-oxobutanoate hydroxymethyltransfe... | 29 | 7.7 | 2 | COLL_DROME (P56721) Transcription factor collier (Transcription ... | 26 | 9.5 | 3 | KNG2_BOVIN (P01045) Kininogen-2 precursor (Kininogen II) (Thiol ... | 29 | 10.0 |
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>PANB_METCA (Q605H0) 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC| 2.1.2.11) (Ketopantoate hydroxymethyltransferase) Length = 269 Score = 29.3 bits (64), Expect = 7.7 Identities = 17/50 (34%), Positives = 28/50 (56%) Frame = -3 Query: 198 SITMPEVAGVRVVTVGDGMPHALVGDEVE*KPHTLSCAVYHASTHSAQCV 49 S + + AG+ V+ VGD + G+ ++ +P TLS + H H+A CV Sbjct: 30 SAALQDEAGIEVILVGDSL-----GNVIQGQPTTLSVTLDHMVYHTA-CV 73
>COLL_DROME (P56721) Transcription factor collier (Transcription factor knot)| Length = 575 Score = 26.2 bits (56), Expect(2) = 9.5 Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 1/24 (4%) Frame = +1 Query: 133 SVWH-AIADGHHAHTGHLRHSYAY 201 S WH A HHA T H H Y + Sbjct: 534 STWHQAFVQHHHAATAHPHHHYPH 557 Score = 21.2 bits (43), Expect(2) = 9.5 Identities = 6/11 (54%), Positives = 7/11 (63%) Frame = +2 Query: 236 HNLNHGHQSWH 268 H+ H HQ WH Sbjct: 553 HHYPHPHQPWH 563
>KNG2_BOVIN (P01045) Kininogen-2 precursor (Kininogen II) (Thiol proteinase| inhibitor) [Contains: Kininogen-2 heavy chain; Bradykinin (Kallidin I); Lysyl-bradykinin (Kallidin II); Kininogen-2 light chain] Length = 619 Score = 28.9 bits (63), Expect = 10.0 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +2 Query: 224 HSQSHNLNHGHQSWHG 271 H +SH L HGHQ HG Sbjct: 453 HHRSHGLGHGHQKQHG 468 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,705,629 Number of Sequences: 219361 Number of extensions: 900819 Number of successful extensions: 1881 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1744 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1875 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)