ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63h24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence 656 0.0
2gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence 545 e-152
3gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome... 58 3e-05
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
5dbj|AK072227.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
6gb|AF119222.1|AF119222 Oryza sativa BAC clone 1.H19, complete se... 58 3e-05
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 58 3e-05
8gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence 48 0.030
9gb|CP000282.1| Saccharophagus degradans 2-40, complete genome 48 0.030
10gb|AF128457.1|AF128457 Oryza sativa subsp. indica BAC clone 16F1... 46 0.12
11gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome 46 0.12
12ref|XM_810102.1| Trypanosoma cruzi strain CL Brener hypothetical... 44 0.48
13gb|AC145910.2| Gallus gallus BAC clone CH261-44O1 from chromosom... 44 0.48
14emb|AL596210.20| Human DNA sequence from clone RP11-92O17 on chr... 42 1.9
15gb|AC147881.2| Xenopus tropicalis clone CH216-115N11, complete s... 42 1.9
16dbj|AB182992.1| Macaca fascicularis OAT1 mRNA for organic anion ... 42 1.9
17dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.9
18gb|AF275943.1|AF275943 Streptomyces avermitilis avermectin polyk... 42 1.9
19dbj|AB032367.1| Streptomyces avermitilis polyketide synthase gen... 42 1.9
20gb|BC109275.1| Homo sapiens F-box protein 40, mRNA (cDNA clone M... 40 7.4
21gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence 40 7.4
22gb|AC124322.7| Mus musculus chromosome 7, clone RP24-330M21, com... 40 7.4
23ref|NM_001004325.1| Homo sapiens keratin associated protein 5-2 ... 40 7.4
24gb|AC166990.3| Mus musculus BAC clone RP24-173K24 from chromosom... 40 7.4
25gb|AC133604.3| Mus musculus BAC clone RP23-416F12 from chromosom... 40 7.4
26gb|AC063920.19| Homo sapiens 3 BAC RP11-60M4 (Roswell Park Cance... 40 7.4
27emb|CR717231.1|PCC11H121B2 P. carinii cosmids PC11H11 and 1B2 40 7.4
28gb|AC010082.4| Homo sapiens BAC clone RP11-109D3 from 7, complet... 40 7.4
29gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete seq... 40 7.4
30emb|X58146.1|DCGLYR D. carota mRNA for a glycine-rich protein 40 7.4
31emb|AL592263.1|PCW01B2 Pneumocystis carinii telomeric cosmid, W01B2 40 7.4
32emb|AJ628245.1| Homo sapiens mRNA for keratin associated protein... 40 7.4
33gb|AC164000.2| Mus musculus chromosome 7, clone RP23-157G7, comp... 40 7.4
34emb|AL731896.10| Mouse DNA sequence from clone RP23-348D11 on ch... 40 7.4
35dbj|AK055141.1| Homo sapiens cDNA FLJ30579 fis, clone BRAWH20069... 40 7.4
36dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl... 40 7.4
37dbj|AK152524.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 7.4
38gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 7.4
39dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
40gb|AC177808.2| Pan troglodytes BAC clone CH251-703A9 from chromo... 40 7.4
41gb|AE004597.1| Pseudomonas aeruginosa PAO1, section 158 of 529 o... 40 7.4
42gb|AC136967.1| Papio anubis clone RP41-30N22, complete sequence 40 7.4
43gb|AC130310.17| Homo sapiens chromosome 11, clone RP11-269A12, c... 40 7.4
44ref|XM_235721.3| PREDICTED: Rattus norvegicus insulin receptor s... 40 7.4
45gb|AC016240.23| Homo sapiens chromosome 8, clone RP11-27N21, com... 40 7.4
46gb|AY888042.1| Orychophragmus violaceus beta-ketoacyl-CoA syntha... 40 7.4
47dbj|AP006453.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
48dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
49dbj|AB126071.1| Homo sapiens KRTAP5-2 mRNA for keratin associate... 40 7.4
50dbj|AP006285.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.4
51gb|AF204674.1|AF204674 Homo sapiens muscle disease-related prote... 40 7.4
52dbj|AP001827.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.4
53gb|AF010150.1|AF010150 Pseudomonas aeruginosa PopN (popN), Pcr1 ... 40 7.4
54gb|AF001305.1|PCAF001305 Pneumocystis carinii f. sp. carinii pro... 40 7.4
55ref|NM_016298.1| Homo sapiens F-box protein 40 (FBXO40), mRNA 40 7.4
56gb|AC158523.2| Mus musculus BAC clone RP23-371I11 from chromosom... 40 7.4
57dbj|AP001578.3| Homo sapiens genomic DNA, chromosome 6q25.2, clo... 40 7.4
58dbj|AB033021.1| Homo sapiens mRNA for KIAA1195 protein, partial cds 40 7.4 
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence
          Length = 211664

 Score =  656 bits (331), Expect = 0.0
 Identities = 388/406 (95%), Gaps = 2/406 (0%)
 Strand = Plus / Plus

                                                                          
Query: 14     cgcttaccacaagtacaaccgcatatattcaccacaacacattgtgcgctgtgagtagag 73
              ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 132597 cgcttaccacaagtaaaacagcatatattcaccacaacacattgtgcgctgtgagtagag 132656

                                                                          
Query: 74     gcatggtaaactgcacaggacagagtgtgtggtttttattcgacttcatctccgactaga 133
              ||||||  |||||||||||||||||||||   ||||||||||||||||||||||||||||
Sbjct: 132657 gcatggcgaactgcacaggacagagtgtgc--tttttattcgacttcatctccgactaga 132714

                                                                          
Query: 134    gcgtgtggcatgccatcgccgacggtcaccacgcgcacaccggccacctcaggcatagtt 193
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 132715 gcgtgtggcatgccatcgccgacggtcaccacgcggacaccggccacctcaggcatagtt 132774

                                                                          
Query: 194    atgcttatgaggctgtgttgagcacgctgccacagccagagccacaacctgaaccatggc 253
              |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 132775 atgcttatgaggctgtgttgagcatgctgccacagccagagccacaacctgaaccatggc 132834

                                                                          
Query: 254    caccagagttggcatggttagtctcccatgatcatgccaccacatccaccgccaccgcac 313
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132835 caccagagttggcatggttagtctcccatgatcatgccaccacatccaccgccaccgcac 132894

                                                                          
Query: 314    ccggcgccacagcctgaaccacatcccccagacttggcatggctcatcttggagccttcc 373
              ||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 132895 ccggcgccacagcatgaaccgcagcccccagacttggcatggctcatcttggagccttcc 132954

                                                            
Query: 374    ataatcatgccgccacattcgccgccaccacagcctgaaccacagc 419
              || ||||||| ||||||| |||||||||| ||||| | ||||||||
Sbjct: 132955 atgatcatgcggccacatccgccgccaccgcagccggcaccacagc 133000



 Score =  170 bits (86), Expect = 3e-39
 Identities = 119/130 (91%)
 Strand = Plus / Plus

                                                                          
Query: 279    ccatgatcatgccaccacatccaccgccaccgcacccggcgccacagcctgaaccacatc 338
              ||||||||||||  |||||||| ||||||||||| ||||| ||||||||||||||||| |
Sbjct: 132953 ccatgatcatgcggccacatccgccgccaccgcagccggcaccacagcctgaaccacagc 133012

                                                                          
Query: 339    ccccagacttggcatggctcatcttggagccttccataatcatgccgccacattcgccgc 398
              ||||||||||||| ||||||||||||||||||||||| | ||||||||||||| ||||||
Sbjct: 133013 ccccagacttggcgtggctcatcttggagccttccatgaccatgccgccacatccgccgc 133072

                        
Query: 399    caccacagcc 408
              |||| |||||
Sbjct: 133073 caccgcagcc 133082



 Score =  139 bits (70), Expect = 1e-29
 Identities = 115/130 (88%)
 Strand = Plus / Plus

                                                                          
Query: 279    ccatgatcatgccaccacatccaccgccaccgcacccggcgccacagcctgaaccacatc 338
              |||||| |||||| |||||||| ||||||||||| |||||||||||||||||||| || |
Sbjct: 133046 ccatgaccatgccgccacatccgccgccaccgcagccggcgccacagcctgaaccgcagc 133105

                                                                          
Query: 339    ccccagacttggcatggctcatcttggagccttccataatcatgccgccacattcgccgc 398
              ||||||||||||||||||||||| |||| |||||| | | ||||||| ||||  ||||||
Sbjct: 133106 ccccagacttggcatggctcatcctggaaccttccttgaccatgccgtcacaaccgccgc 133165

                        
Query: 399    caccacagcc 408
              |||| |||||
Sbjct: 133166 caccgcagcc 133175



 Score =  127 bits (64), Expect = 4e-26
 Identities = 91/100 (91%)
 Strand = Plus / Plus

                                                                          
Query: 302    ccgccaccgcacccggcgccacagcctgaaccacatcccccagacttggcatggctcatc 361
              ||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 133162 ccgccaccgcagccggcgccacagcctgaaccacagcctccagacttggcatggctcatc 133221

                                                      
Query: 362    ttggagccttccataatcatgccgccacattcgccgccac 401
              ||||| |||||||| | ||||| ||||||  |||||||||
Sbjct: 133222 ttggaaccttccatgaccatgctgccacaaccgccgccac 133261



 Score =  103 bits (52), Expect = 6e-19
 Identities = 73/81 (90%)
 Strand = Plus / Plus

                                                                          
Query: 464    gccggcaccgcagccggcaccacagcctgaaccacatcccccanacttggcatgggtnat 523
              |||| ||||||||||||||||||||||||||||||| |||||| ||||||| ||| | ||
Sbjct: 132975 gccgccaccgcagccggcaccacagcctgaaccacagcccccagacttggcgtggctcat 133034

                                   
Query: 524    tttngagccttccatgaccat 544
               || |||||||||||||||||
Sbjct: 133035 cttggagccttccatgaccat 133055



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/81 (87%)
 Strand = Plus / Plus

                                                                          
Query: 464    gccggcaccgcagccggcaccacagcctgaaccacatcccccanacttggcatgggtnat 523
              |||| ||||||||||||| ||||||||||||||||| || ||| ||||||||||| | ||
Sbjct: 133161 gccgccaccgcagccggcgccacagcctgaaccacagcctccagacttggcatggctcat 133220

                                   
Query: 524    tttngagccttccatgaccat 544
               || || ||||||||||||||
Sbjct: 133221 cttggaaccttccatgaccat 133241



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 66/74 (89%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                          
Query: 394    gccgccaccacagcctgaaccacagcnccccagacttggcatgggttattttggagcctt 453
              |||| ||||||||||||||||||||| ||||||||||||| ||| | || ||||||||||
Sbjct: 132987 gccggcaccacagcctgaaccacagc-ccccagacttggcgtggctcatcttggagcctt 133045

                            
Query: 454    tcatgancatgccg 467
               ||||| |||||||
Sbjct: 133046 ccatgaccatgccg 133059



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                     
Query: 464    gccggcaccgcagccggcaccacagcctgaaccacatcccccanacttggcatgg 518
              |||| ||||||||||||| |||||||||||||| || |||||| |||||||||||
Sbjct: 133068 gccgccaccgcagccggcgccacagcctgaaccgcagcccccagacttggcatgg 133122



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                          
Query: 469    caccgcagccggcaccacagcctgaaccacatcccccanacttggcatgggtnattttng 528
              ||||||| ||||| ||||||| |||||| || |||||| ||||||||||| | || || |
Sbjct: 132887 caccgcacccggcgccacagcatgaaccgcagcccccagacttggcatggctcatcttgg 132946

                          
Query: 529    agccttccatga 540
              ||||||||||||
Sbjct: 132947 agccttccatga 132958



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 57/65 (87%), Gaps = 1/65 (1%)
 Strand = Plus / Plus

                                                                          
Query: 401    ccacagcctgaaccacagcnccccagacttggcatgggttattttggagcctttcatgan 460
              ||||||||||||||||||| | ||||||||||||||| | || ||||| |||| ||||| 
Sbjct: 133180 ccacagcctgaaccacagc-ctccagacttggcatggctcatcttggaaccttccatgac 133238

                   
Query: 461    catgc 465
              |||||
Sbjct: 133239 catgc 133243



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 57/65 (87%), Gaps = 1/65 (1%)
 Strand = Plus / Plus

                                                                          
Query: 401    ccacagcctgaaccacagcnccccagacttggcatgggttattttggagcctttcatgan 460
              ||||||| |||||| |||| ||||||||||||||||| | || |||||||||| ||||| 
Sbjct: 132901 ccacagcatgaaccgcagc-ccccagacttggcatggctcatcttggagccttccatgat 132959

                   
Query: 461    catgc 465
              |||||
Sbjct: 132960 catgc 132964



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 35/37 (94%), Gaps = 1/37 (2%)
 Strand = Plus / Plus

                                                   
Query: 401    ccacagcctgaaccacagcnccccagacttggcatgg 437
              |||||||||||||| |||| |||||||||||||||||
Sbjct: 133087 ccacagcctgaaccgcagc-ccccagacttggcatgg 133122



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                       
Query: 319    gccacagcctgaaccacatcccccagacttggcatggctcatcttggagccttccat 375
              ||||||||||||||| || || || |||||||||  ||   ||||||||||||||||
Sbjct: 133335 gccacagcctgaaccgcaaccacctgacttggcaaagccagtcttggagccttccat 133391
to top
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence
          Length = 184425

 Score =  545 bits (275), Expect = e-152
 Identities = 305/314 (97%), Gaps = 2/314 (0%)
 Strand = Plus / Plus

                                                                         
Query: 14    cgcttaccacaagtacaaccgcatatattcaccacaacacattgtgcgctgtgagtagag 73
             ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 74846 cgcttaccacaagtacaacagcatatattcacaacaacacattgtgcgctgtgagtagag 74905

                                                                         
Query: 74    gcatggtaaactgcacaggacagagtgtgtggtttttattcgacttcatctccgactaga 133
             |||||| |||||||||||||||||||||    |||||||||||||||| |||||||||||
Sbjct: 74906 gcatggcaaactgcacaggacagagtgtac--tttttattcgacttcacctccgactaga 74963

                                                                         
Query: 134   gcgtgtggcatgccatcgccgacggtcaccacgcgcacaccggccacctcaggcatagtt 193
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 74964 gcgtgtggcatgccatcgccgacggtcaccacgcggacaccggccacctcaggcatagtt 75023

                                                                         
Query: 194   atgcttatgaggctgtgttgagcacgctgccacagccagagccacaacctgaaccatggc 253
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75024 atgcttatgaggctgtgttgagcacgctgccacagccagagccacaacctgaaccatggc 75083

                                                                         
Query: 254   caccagagttggcatggttagtctcccatgatcatgccaccacatccaccgccaccgcac 313
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75084 caccagagttggcatggttagtctcccatgatcatgccaccacatccaccgccaccgcac 75143

                           
Query: 314   ccggcgccacagcc 327
             ||||||||||||||
Sbjct: 75144 ccggcgccacagcc 75157



 Score =  135 bits (68), Expect = 2e-28
 Identities = 101/112 (90%)
 Strand = Plus / Plus

                                                                         
Query: 279   ccatgatcatgccaccacatccaccgccaccgcacccggcgccacagcctgaaccacatc 338
             ||||||||||||  |||||||| ||||||||||| ||||| ||||||||||||||||| |
Sbjct: 75190 ccatgatcatgctgccacatccgccgccaccgcagccggcaccacagcctgaaccacagc 75249

                                                                 
Query: 339   ccccagacttggcatggctcatcttggagccttccataatcatgccgccaca 390
             ||||||||||||||||||||||| |||| |||||||| | ||||| ||||||
Sbjct: 75250 ccccagacttggcatggctcatcctggaaccttccatgaccatgctgccaca 75301



 Score =  119 bits (60), Expect = 1e-23
 Identities = 81/88 (92%)
 Strand = Plus / Plus

                                                                         
Query: 332   ccacatcccccagacttggcatggctcatcttggagccttccataatcatgccgccacat 391
             ||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 75150 ccacagcccccagacttggcatggctcatcttggagccttccatgatcatgctgccacat 75209

                                         
Query: 392   tcgccgccaccacagcctgaaccacagc 419
              |||||||||| ||||| | ||||||||
Sbjct: 75210 ccgccgccaccgcagccggcaccacagc 75237



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 72/81 (88%)
 Strand = Plus / Plus

                                                                         
Query: 464   gccggcaccgcagccggcaccacagcctgaaccacatcccccanacttggcatgggtnat 523
             |||| ||||||||||||||||||||||||||||||| |||||| ||||||||||| | ||
Sbjct: 75212 gccgccaccgcagccggcaccacagcctgaaccacagcccccagacttggcatggctcat 75271

                                  
Query: 524   tttngagccttccatgaccat 544
               | || ||||||||||||||
Sbjct: 75272 cctggaaccttccatgaccat 75292



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/72 (87%), Gaps = 1/72 (1%)
 Strand = Plus / Plus

                                                                         
Query: 394   gccgccaccacagcctgaaccacagcnccccagacttggcatgggttattttggagcctt 453
             |||| ||||||||||||||||||||| ||||||||||||||||| | ||  |||| ||||
Sbjct: 75224 gccggcaccacagcctgaaccacagc-ccccagacttggcatggctcatcctggaacctt 75282

                         
Query: 454   tcatgancatgc 465
              ||||| |||||
Sbjct: 75283 ccatgaccatgc 75294



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/94 (84%), Gaps = 1/94 (1%)
 Strand = Plus / Plus

                                                                         
Query: 372   ccataatcatgccgccacattcgccgccaccacagcctgaaccacagcnccccagacttg 431
             |||| |||||||| |||||| | |||||||| || || |  ||||||| |||||||||||
Sbjct: 75109 ccatgatcatgccaccacatccaccgccaccgcacccggcgccacagc-ccccagacttg 75167

                                               
Query: 432   gcatgggttattttggagcctttcatgancatgc 465
             |||||| | || |||||||||| ||||| |||||
Sbjct: 75168 gcatggctcatcttggagccttccatgatcatgc 75201



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 495   ccacatcccccanacttggcatgggtnattttngagccttccatga 540
             ||||| |||||| ||||||||||| | || || |||||||||||||
Sbjct: 75150 ccacagcccccagacttggcatggctcatcttggagccttccatga 75195



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Plus

                                                                   
Query: 379   catgccgccacattcgccgccaccacagcctgaaccacagcnccccagacttgg 432
             ||||||||||||  | || |||||||| ||||||||||||| | ||||||||||
Sbjct: 75638 catgccgccacaacctccaccaccacaacctgaaccacagc-caccagacttgg 75690
to top
>gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0034K24, complete sequence
          Length = 142852

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                  
Query: 302   ccgccaccgcacccggcgccacagcctgaaccacatcccccagacttggcatg 354
             ||||||||||| ||| |||||||||||||||| || || || |||||||||||
Sbjct: 21833 ccgccaccgcagccgccgccacagcctgaaccgcagccaccggacttggcatg 21781



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                   
Query: 464   gccggcaccgcagccggcaccacagcctgaaccacatcccccanacttggcatg 517
             |||| ||||||||||| | |||||||||||||| || || ||  ||||||||||
Sbjct: 21834 gccgccaccgcagccgccgccacagcctgaaccgcagccaccggacttggcatg 21781
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                     
Query: 302      ccgccaccgcacccggcgccacagcctgaaccacatcccccagacttggcatg 354
                ||||||||||| ||| |||||||||||||||| || || || |||||||||||
Sbjct: 23365142 ccgccaccgcagccgccgccacagcctgaaccgcagccaccggacttggcatg 23365194



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                      
Query: 464      gccggcaccgcagccggcaccacagcctgaaccacatcccccanacttggcatg 517
                |||| ||||||||||| | |||||||||||||| || || ||  ||||||||||
Sbjct: 23365141 gccgccaccgcagccgccgccacagcctgaaccgcagccaccggacttggcatg 23365194
to top
>dbj|AK072227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013168G19, full
            insert sequence
          Length = 2470

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 302  ccgccaccgcacccggcgccacagcctgaaccacatcccccagacttggcatg 354
            ||||||||||| ||| |||||||||||||||| || || || |||||||||||
Sbjct: 2184 ccgccaccgcagccgccgccacagcctgaaccgcagccaccggacttggcatg 2132



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                  
Query: 464  gccggcaccgcagccggcaccacagcctgaaccacatcccccanacttggcatg 517
            |||| ||||||||||| | |||||||||||||| || || ||  ||||||||||
Sbjct: 2185 gccgccaccgcagccgccgccacagcctgaaccgcagccaccggacttggcatg 2132
to top
>gb|AF119222.1|AF119222 Oryza sativa BAC clone 1.H19, complete sequence
          Length = 77605

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                  
Query: 302   ccgccaccgcacccggcgccacagcctgaaccacatcccccagacttggcatg 354
             ||||||||||| ||| |||||||||||||||| || || || |||||||||||
Sbjct: 14228 ccgccaccgcagccgccgccacagcctgaaccgcagccaccggacttggcatg 14176



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                   
Query: 464   gccggcaccgcagccggcaccacagcctgaaccacatcccccanacttggcatg 517
             |||| ||||||||||| | |||||||||||||| || || ||  ||||||||||
Sbjct: 14229 gccgccaccgcagccgccgccacagcctgaaccgcagccaccggacttggcatg 14176
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                     
Query: 302      ccgccaccgcacccggcgccacagcctgaaccacatcccccagacttggcatg 354
                ||||||||||| ||| |||||||||||||||| || || || |||||||||||
Sbjct: 23675052 ccgccaccgcagccgccgccacagcctgaaccgcagccaccggacttggcatg 23675104



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                      
Query: 464      gccggcaccgcagccggcaccacagcctgaaccacatcccccanacttggcatg 517
                |||| ||||||||||| | |||||||||||||| || || ||  ||||||||||
Sbjct: 23675051 gccgccaccgcagccgccgccacagcctgaaccgcagccaccggacttggcatg 23675104
to top
>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence
          Length = 183990

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                 
Query: 302   ccgccaccgcacccggcgccacagcctgaaccacatcccccagacttggcat 353
             ||||||||||| ||  | ||||| || |||||||| ||||||||||||||||
Sbjct: 30600 ccgccaccgcaaccaccaccacacccagaaccacagcccccagacttggcat 30651



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                   
Query: 398   ccaccacagcctgaaccacagcnccccagacttggcat 435
             |||||||| || |||||||||| |||||||||||||||
Sbjct: 30615 ccaccacacccagaaccacagc-ccccagacttggcat 30651
to top
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 222     gccacagccagagccacaacctgaacca 249
               |||||||||||| |||||||||||||||
Sbjct: 4501165 gccacagccagaaccacaacctgaacca 4501192



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 222     gccacagccagagccacaacctgaacca 249
               |||||||||||||||||| || ||||||
Sbjct: 4501153 gccacagccagagccacagccagaacca 4501180
to top
>gb|AF128457.1|AF128457 Oryza sativa subsp. indica BAC clone 16F19 php20725 region, complete
            sequence
          Length = 70311

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 308  ccgcacccggcgccacagcctgaaccacatcccccagacttggcatg 354
            ||||| ||| |||||||||||||||| || || || |||||||||||
Sbjct: 7576 ccgcagccgccgccacagcctgaaccgcagccaccggacttggcatg 7530



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 40/47 (85%)
 Strand = Plus / Minus

                                                           
Query: 471  ccgcagccggcaccacagcctgaaccacatcccccanacttggcatg 517
            ||||||||| | |||||||||||||| || || ||  ||||||||||
Sbjct: 7576 ccgcagccgccgccacagcctgaaccgcagccaccggacttggcatg 7530
to top
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 222     gccacagccagagccacaacctgaacc 248
               |||| ||||||||||||||||||||||
Sbjct: 2009357 gccagagccagagccacaacctgaacc 2009383
to top
>ref|XM_810102.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053511311.70) partial mRNA
          Length = 13794

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 289  gccaccacatccaccgccaccgcacccggcgcca 322
            ||||||||| |||||||||||||| ||| |||||
Sbjct: 6603 gccaccacagccaccgccaccgcagccgccgcca 6636
to top
>gb|AC145910.2| Gallus gallus BAC clone CH261-44O1 from chromosome unknown, complete
              sequence
          Length = 213878

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 72     aggcatggtaaactgcacaggacaga 97
              |||||||||||||| |||||||||||
Sbjct: 197848 aggcatggtaaactacacaggacaga 197873
to top
>emb|AL596210.20| Human DNA sequence from clone RP11-92O17 on chromosome 1 Contains part
             of the CAMTA1 gene for calmodulin binding transcription
             activator 1, complete sequence
          Length = 107112

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 86    gcacaggacagagtgtgtggtttttattc 114
             ||||||| |||||||||||| ||||||||
Sbjct: 40682 gcacagggcagagtgtgtgggttttattc 40710
to top
>gb|AC147881.2| Xenopus tropicalis clone CH216-115N11, complete sequence
          Length = 162394

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 76    atggtaaactgcacaggacag 96
             |||||||||||||||||||||
Sbjct: 58881 atggtaaactgcacaggacag 58861
to top
>dbj|AB182992.1| Macaca fascicularis OAT1 mRNA for organic anion transporter 1,
            complete cds
          Length = 1979

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 326  cctgaaccacatcccccagacttgg 350
            ||||||||||| |||||||||||||
Sbjct: 1929 cctgaaccacagcccccagacttgg 1905
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 295     acatccaccgccaccgcaccc 315
               |||||||||||||||||||||
Sbjct: 1184371 acatccaccgccaccgcaccc 1184391



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 295     acatccaccgccaccgcaccc 315
               |||||||||||||||||||||
Sbjct: 1147280 acatccaccgccaccgcaccc 1147260
to top
>gb|AF275943.1|AF275943 Streptomyces avermitilis avermectin polyketide synthase gene, partial
            cds
          Length = 11096

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 295  acatccaccgccaccgcaccc 315
            |||||||||||||||||||||
Sbjct: 9584 acatccaccgccaccgcaccc 9564
to top
>dbj|AB032367.1| Streptomyces avermitilis polyketide synthase gene cluster (aveA1,
             aveA2, aveA3, aveA4) and aveC, aveE genes, complete cds
          Length = 64957

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 295   acatccaccgccaccgcaccc 315
             |||||||||||||||||||||
Sbjct: 46655 acatccaccgccaccgcaccc 46675



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 295  acatccaccgccaccgcaccc 315
            |||||||||||||||||||||
Sbjct: 9564 acatccaccgccaccgcaccc 9544
to top
>gb|BC109275.1| Homo sapiens F-box protein 40, mRNA (cDNA clone MGC:129902
            IMAGE:40028315), complete cds
          Length = 3017

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 90   aggacagagtgtgtggtttt 109
            ||||||||||||||||||||
Sbjct: 2209 aggacagagtgtgtggtttt 2228
to top
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 465    ccggcaccgcagccggcacc 484
              ||||||||||||||||||||
Sbjct: 892031 ccggcaccgcagccggcacc 892050
to top
>gb|AC124322.7| Mus musculus chromosome 7, clone RP24-330M21, complete sequence
          Length = 139336

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    catggttagtctcccatgat 285
              ||||||||||||||||||||
Sbjct: 115787 catggttagtctcccatgat 115806
to top
>ref|NM_001004325.1| Homo sapiens keratin associated protein 5-2 (KRTAP5-2), mRNA
          Length = 1149

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 223 ccacagccagagccacaacc 242
           ||||||||||||||||||||
Sbjct: 130 ccacagccagagccacaacc 111
to top
>gb|AC166990.3| Mus musculus BAC clone RP24-173K24 from chromosome 12, complete
            sequence
          Length = 144985

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   gagtagaggcatggtaaact 85
            ||||||||||||||||||||
Sbjct: 4784 gagtagaggcatggtaaact 4765
to top
>gb|AC133604.3| Mus musculus BAC clone RP23-416F12 from chromosome 8, complete sequence
          Length = 221603

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     gagtagaggcatggtaaact 85
              ||||||||||||||||||||
Sbjct: 118427 gagtagaggcatggtaaact 118446
to top
>gb|AC063920.19| Homo sapiens 3 BAC RP11-60M4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 34432

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    aggacagagtgtgtggtttt 109
             ||||||||||||||||||||
Sbjct: 30808 aggacagagtgtgtggtttt 30827
to top
>emb|CR717231.1|PCC11H121B2 P. carinii cosmids PC11H11 and 1B2
          Length = 35756

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 222   gccacagccagagccacaacctgaacca 249
             |||| |||||||||||||||| ||||||
Sbjct: 22251 gccagagccagagccacaaccagaacca 22278
to top
>gb|AC010082.4| Homo sapiens BAC clone RP11-109D3 from 7, complete sequence
          Length = 143035

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    ttatatatcgcttaccacaa 25
            ||||||||||||||||||||
Sbjct: 4709 ttatatatcgcttaccacaa 4690
to top
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence
          Length = 3281944

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 379    catgccgccacattcgccgc 398
              ||||||||||||||||||||
Sbjct: 417488 catgccgccacattcgccgc 417507
to top
>emb|X58146.1|DCGLYR D. carota mRNA for a glycine-rich protein
          Length = 725

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 288 tgccaccacatccaccgccaccgc 311
           |||||||| |||||||||||||||
Sbjct: 454 tgccaccatatccaccgccaccgc 431
to top
>emb|AL592263.1|PCW01B2 Pneumocystis carinii telomeric cosmid, W01B2
          Length = 32542

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 222   gccacagccagagccacaacctgaacca 249
             |||| |||||||||||||||| ||||||
Sbjct: 19037 gccagagccagagccacaaccagaacca 19064
to top
>emb|AJ628245.1| Homo sapiens mRNA for keratin associated protein 5-8 (KRTAP5-8
           gene), clone scl121
          Length = 1149

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 223 ccacagccagagccacaacc 242
           ||||||||||||||||||||
Sbjct: 130 ccacagccagagccacaacc 111
to top
>gb|AC164000.2| Mus musculus chromosome 7, clone RP23-157G7, complete sequence
          Length = 206022

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 266    catggttagtctcccatgat 285
              ||||||||||||||||||||
Sbjct: 204630 catggttagtctcccatgat 204611
to top
>emb|AL731896.10| Mouse DNA sequence from clone RP23-348D11 on chromosome 11 Contains a
              ribosomal protein L15 (Rpl15) pseudogene and a SNARE
              protein Ykt (0610042I15Rik) pseudogene, complete sequence
          Length = 226786

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 479    ggcaccacagcctgaaccac 498
              ||||||||||||||||||||
Sbjct: 212346 ggcaccacagcctgaaccac 212327
to top
>dbj|AK055141.1| Homo sapiens cDNA FLJ30579 fis, clone BRAWH2006989, weakly similar
           to DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT (EC
           2.7.7.6)
          Length = 1957

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 223 ccacagccagagccacaacc 242
           ||||||||||||||||||||
Sbjct: 938 ccacagccagagccacaacc 957
to top
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 379    catgccgccacattcgccgc 398
              ||||||||||||||||||||
Sbjct: 778023 catgccgccacattcgccgc 778004
to top
>dbj|AK152524.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830078D18 product:cathepsin C, full
            insert sequence
          Length = 3209

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 266  catggttagtctcccatgat 285
            ||||||||||||||||||||
Sbjct: 1380 catggttagtctcccatgat 1399
to top
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 353     tggctcatcttggagccttc 372
               ||||||||||||||||||||
Sbjct: 5230293 tggctcatcttggagccttc 5230312
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 302      ccgccaccgcacccggcgcc 321
                ||||||||||||||||||||
Sbjct: 13646129 ccgccaccgcacccggcgcc 13646148
to top
>gb|AC177808.2| Pan troglodytes BAC clone CH251-703A9 from chromosome unknown, complete
             sequence
          Length = 207792

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   gccaccgcacccggcgccac 323
             ||||||||||||||||||||
Sbjct: 33824 gccaccgcacccggcgccac 33805
to top
>gb|AE004597.1| Pseudomonas aeruginosa PAO1, section 158 of 529 of the complete
            genome
          Length = 10052

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 142  catgccatcgccgacggtca 161
            ||||||||||||||||||||
Sbjct: 3024 catgccatcgccgacggtca 3005
to top
>gb|AC136967.1| Papio anubis clone RP41-30N22, complete sequence
          Length = 194730

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 216    cacgctgccacagccagagccacaacct 243
              ||||| |||||||||| |||||||||||
Sbjct: 107568 cacgcagccacagccacagccacaacct 107595
to top
>gb|AC130310.17| Homo sapiens chromosome 11, clone RP11-269A12, complete sequence
          Length = 155537

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   ccacagccagagccacaacc 242
             ||||||||||||||||||||
Sbjct: 15620 ccacagccagagccacaacc 15639
to top
>ref|XM_235721.3| PREDICTED: Rattus norvegicus insulin receptor substrate 4 (IRS-4),
            mRNA
          Length = 4083

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 234  gccacaacctgaaccatggccacc 257
            ||||| ||||||||||||||||||
Sbjct: 2187 gccaccacctgaaccatggccacc 2164
to top
>gb|AC016240.23| Homo sapiens chromosome 8, clone RP11-27N21, complete sequence
          Length = 167578

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 401   ccacagcctgaaccacagcnccc 423
             ||||||||||||||||||| |||
Sbjct: 99461 ccacagcctgaaccacagcgccc 99439
to top
>gb|AY888042.1| Orychophragmus violaceus beta-ketoacyl-CoA synthase (FAE1) gene,
            complete cds
          Length = 1671

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 190  agttatgcttatgaggctgtgttg 213
            ||||||| ||||||||||||||||
Sbjct: 1442 agttatggttatgaggctgtgttg 1465
to top
>dbj|AP006453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1339H09
          Length = 131136

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 302   ccgccaccgcacccggcgcc 321
             ||||||||||||||||||||
Sbjct: 83545 ccgccaccgcacccggcgcc 83564
to top
>dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1040D06
          Length = 155034

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 302   ccgccaccgcacccggcgcc 321
             ||||||||||||||||||||
Sbjct: 44243 ccgccaccgcacccggcgcc 44262
to top
>dbj|AB126071.1| Homo sapiens KRTAP5-2 mRNA for keratin associated protein, complete
           cds
          Length = 664

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 223 ccacagccagagccacaacc 242
           ||||||||||||||||||||
Sbjct: 138 ccacagccagagccacaacc 119
to top
>dbj|AP006285.2| Homo sapiens genomic DNA, chromosome 11 clone:RP13-25N22, complete
             sequence
          Length = 190267

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   ccacagccagagccacaacc 242
             ||||||||||||||||||||
Sbjct: 93577 ccacagccagagccacaacc 93596
to top
>gb|AF204674.1|AF204674 Homo sapiens muscle disease-related protein mRNA, complete cds
          Length = 3442

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 90   aggacagagtgtgtggtttt 109
            ||||||||||||||||||||
Sbjct: 2304 aggacagagtgtgtggtttt 2323
to top
>dbj|AP001827.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-236L10, complete
              sequence
          Length = 167639

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    catagttatgcttatgaggc 206
              ||||||||||||||||||||
Sbjct: 147843 catagttatgcttatgaggc 147862
to top
>gb|AF010150.1|AF010150 Pseudomonas aeruginosa PopN (popN), Pcr1 (pcr1), Pcr2 (pcr2), Pcr3
            (pcr3), Pcr4 (pcr4), PcrD (pcrD) and PcrR (pcrR) genes,
            complete cds
          Length = 4889

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 142  catgccatcgccgacggtca 161
            ||||||||||||||||||||
Sbjct: 3015 catgccatcgccgacggtca 2996
to top
>gb|AF001305.1|PCAF001305 Pneumocystis carinii f. sp. carinii protease 1 gene, complete cds
          Length = 3072

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 222  gccacagccagagccacaacctgaacca 249
            |||| |||||||||||||||| ||||||
Sbjct: 2703 gccagagccagagccacaaccagaacca 2730
to top
>ref|NM_016298.1| Homo sapiens F-box protein 40 (FBXO40), mRNA
          Length = 3442

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 90   aggacagagtgtgtggtttt 109
            ||||||||||||||||||||
Sbjct: 2304 aggacagagtgtgtggtttt 2323
to top
>gb|AC158523.2| Mus musculus BAC clone RP23-371I11 from chromosome 12, complete
             sequence
          Length = 176139

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    gagtagaggcatggtaaact 85
             ||||||||||||||||||||
Sbjct: 97250 gagtagaggcatggtaaact 97231
to top
>dbj|AP001578.3| Homo sapiens genomic DNA, chromosome 6q25.2, clone:KB1954F7
          Length = 239057

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 279    ccatgatcatgccaccacat 298
              ||||||||||||||||||||
Sbjct: 176559 ccatgatcatgccaccacat 176578
to top
>dbj|AB033021.1| Homo sapiens mRNA for KIAA1195 protein, partial cds
          Length = 5927

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 90   aggacagagtgtgtggtttt 109
            ||||||||||||||||||||
Sbjct: 2602 aggacagagtgtgtggtttt 2621


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,091,603
Number of Sequences: 3902068
Number of extensions: 4091603
Number of successful extensions: 105131
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104683
Number of HSP's gapped (non-prelim): 441
length of query: 548
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 525
effective length of database: 17,143,297,704
effective search space: 9000231294600
effective search space used: 9000231294600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top