ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63h22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PDIA6_PONPY (Q5R6T1) Protein disulfide-isomerase A6 precursor (E... 140 2e-33
2PDIA6_HUMAN (Q15084) Protein disulfide-isomerase A6 precursor (E... 138 1e-32
3PDIA6_MOUSE (Q922R8) Protein disulfide-isomerase A6 precursor (E... 136 4e-32
4PDIA6_RAT (Q63081) Protein disulfide-isomerase A6 precursor (EC ... 134 1e-31
5PDIA6_MESAU (P38660) Protein disulfide-isomerase A6 precursor (E... 127 2e-29
6PDIA6_CAEEL (Q11067) Probable protein disulfide-isomerase A6 pre... 120 3e-27
7MUTS_DESVH (P61666) DNA mismatch repair protein mutS 34 0.33
8ZAN_PIG (Q28983) Zonadhesin precursor 33 0.73
9YAI1_ENCCU (Q8SU96) Hypothetical protein ECU10_1810 32 0.96
10YRS7_CAEEL (Q10003) Hypothetical protein T05H10.7 32 1.3
11PRPP_HUMAN (P81489) Salivary proline-rich protein II-1 (Fragment) 31 2.1
12PDIA4_CAEEL (P34329) Probable protein disulfide-isomerase A4 pre... 31 2.8
13SYC_BACSK (Q5WLT3) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cyst... 30 3.6
14PEB1_DROME (Q9U6L5) Ejaculatory bulb-specific protein 1 precurso... 27 3.8
15GUNC_PSEFL (P27033) Endoglucanase C precursor (EC 3.2.1.4) (Endo... 30 4.8
16PURT_ECOLI (P33221) Phosphoribosylglycinamide formyltransferase ... 30 4.8
17DEDD2_MOUSE (Q8QZV0) DNA-binding death effector domain-containin... 30 6.2
18PUR7_FUSNN (Q8REV1) Phosphoribosylaminoimidazole-succinocarboxam... 30 6.2

>PDIA6_PONPY (Q5R6T1) Protein disulfide-isomerase A6 precursor (EC 5.3.4.1)|
          Length = 440

 Score =  140 bits (354), Expect = 2e-33
 Identities = 69/162 (42%), Positives = 101/162 (62%), Gaps = 2/162 (1%)
 Frame = -1

Query: 563 ELTSADVMEEKCASAAICFVSFLPDILDSKAEGRNKYLELLLSVAEKFKKSPYSFVWAGA 384
           E+ S D+ +  C    +C VS LP ILD+ A GRN YLE+LL +A+K+KK  + ++W  A
Sbjct: 280 EIISEDIAKRTCEEHQLCVVSVLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEA 339

Query: 383 GKQADLXKQVGVGGYGYPAMVALNVKKGAYAPLRSAFELAEITEFVKEAGRGGKGNLPLE 204
           G Q++L   +G+GG+GYPAM A+N +K  +A L+ +F    I EF++E   G     P+ 
Sbjct: 340 GAQSELETALGIGGFGYPAMAAINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVG 399

Query: 203 GA--PTVVQSEPWDGKDGEVIEEDEFSLEELMADSSAPNDEL 84
           G   PT+V+ EPWDG+DGE+  ED+  L ++  D     DEL
Sbjct: 400 GGAFPTIVEREPWDGRDGELPVEDDIDLSDVELDDLG-KDEL 440



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>PDIA6_HUMAN (Q15084) Protein disulfide-isomerase A6 precursor (EC 5.3.4.1)|
           (Protein disulfide isomerase P5) (Thioredoxin
           domain-containing protein 7)
          Length = 440

 Score =  138 bits (348), Expect = 1e-32
 Identities = 67/162 (41%), Positives = 101/162 (62%), Gaps = 2/162 (1%)
 Frame = -1

Query: 563 ELTSADVMEEKCASAAICFVSFLPDILDSKAEGRNKYLELLLSVAEKFKKSPYSFVWAGA 384
           E+ + D+ +  C    +C V+ LP ILD+ A GRN YLE+LL +A+K+KK  + ++W  A
Sbjct: 280 EIINEDIAKRTCEEHQLCVVAVLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEA 339

Query: 383 GKQADLXKQVGVGGYGYPAMVALNVKKGAYAPLRSAFELAEITEFVKEAGRGGKGNLPLE 204
           G Q++L   +G+GG+GYPAM A+N +K  +A L+ +F    I EF++E   G     P+ 
Sbjct: 340 GAQSELETALGIGGFGYPAMAAINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVG 399

Query: 203 GA--PTVVQSEPWDGKDGEVIEEDEFSLEELMADSSAPNDEL 84
           G   PT+V+ EPWDG+DGE+  ED+  L ++  D     DEL
Sbjct: 400 GGAFPTIVEREPWDGRDGELPVEDDIDLSDVELDDLG-KDEL 440



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>PDIA6_MOUSE (Q922R8) Protein disulfide-isomerase A6 precursor (EC 5.3.4.1)|
           (Thioredoxin domain-containing protein 7)
          Length = 440

 Score =  136 bits (343), Expect = 4e-32
 Identities = 67/162 (41%), Positives = 99/162 (61%), Gaps = 2/162 (1%)
 Frame = -1

Query: 563 ELTSADVMEEKCASAAICFVSFLPDILDSKAEGRNKYLELLLSVAEKFKKSPYSFVWAGA 384
           E+ + D+ ++ C    +C V+ LP ILD+ A GRN YLE+LL +A+K+KK  + ++W  A
Sbjct: 280 EIINEDIAKKTCEEHQLCVVAVLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEA 339

Query: 383 GKQADLXKQVGVGGYGYPAMVALNVKKGAYAPLRSAFELAEITEFVKEAGRGGKGNLPLE 204
           G Q +L   +G+GG+GYPAM A+N +K  +A L+ +F    I EF++E   G     P+ 
Sbjct: 340 GAQYELENALGIGGFGYPAMAAINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVG 399

Query: 203 GA--PTVVQSEPWDGKDGEVIEEDEFSLEELMADSSAPNDEL 84
           G   PT+   EPWDGKDGE+  ED+  L ++  D     DEL
Sbjct: 400 GGSFPTITPREPWDGKDGELPVEDDIDLSDVELD-DLEKDEL 440



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>PDIA6_RAT (Q63081) Protein disulfide-isomerase A6 precursor (EC 5.3.4.1)|
           (Protein disulfide isomerase P5) (Calcium-binding
           protein 1) (CaBP1) (Thioredoxin domain-containing
           protein 7)
          Length = 440

 Score =  134 bits (338), Expect = 1e-31
 Identities = 66/162 (40%), Positives = 98/162 (60%), Gaps = 2/162 (1%)
 Frame = -1

Query: 563 ELTSADVMEEKCASAAICFVSFLPDILDSKAEGRNKYLELLLSVAEKFKKSPYSFVWAGA 384
           E+ + D+ ++ C    +C V+ LP ILD+ A GRN YLE+LL +A+K+KK  + ++W  A
Sbjct: 280 EIINEDIAKKTCEEHQLCVVAVLPHILDTGATGRNSYLEVLLKLADKYKKKMWGWLWTEA 339

Query: 383 GKQADLXKQVGVGGYGYPAMVALNVKKGAYAPLRSAFELAEITEFVKEAGRGGKGNLPLE 204
           G Q +L   +G+GG+GYPAM A+N +K  +A L+ +F    I EF++E   G     P+ 
Sbjct: 340 GAQYELENALGIGGFGYPAMAAINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVG 399

Query: 203 GA--PTVVQSEPWDGKDGEVIEEDEFSLEELMADSSAPNDEL 84
           G   P +   EPWDGKDGE+  ED+  L ++  D     DEL
Sbjct: 400 GGSFPNITPREPWDGKDGELPVEDDIDLSDVELD-DLEKDEL 440



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>PDIA6_MESAU (P38660) Protein disulfide-isomerase A6 precursor (EC 5.3.4.1)|
           (Protein disulfide isomerase P5)
          Length = 439

 Score =  127 bits (319), Expect = 2e-29
 Identities = 64/162 (39%), Positives = 97/162 (59%), Gaps = 2/162 (1%)
 Frame = -1

Query: 563 ELTSADVMEEKCASAAICFVSFLPDILDSKAEGRNKYLELLLSVAEKFKKSPYSFVWAGA 384
           E+ + DV ++ C    +C V+ LP ILD+ A  RN YLE+LL +A+K+KK  + ++W  A
Sbjct: 280 EIINEDVAKKMCEEHQLCVVAVLPHILDTGA-ARNSYLEILLKLADKYKKKMWGWLWTEA 338

Query: 383 GKQADLXKQVGVGGYGYPAMVALNVKKGAYAPLRSAFELAEITEFVKEAGRGGKGNLPLE 204
           G Q++L   +G+GG+GYPAM  +N +K  +A L+ +F    I EF++E   G     P+ 
Sbjct: 339 GAQSELENALGIGGFGYPAMARINARKMKFALLKGSFSEQGINEFLRELSFGRASTAPVG 398

Query: 203 GA--PTVVQSEPWDGKDGEVIEEDEFSLEELMADSSAPNDEL 84
           G   P +   EPWDG+DGE+  ED+  L ++  D     DEL
Sbjct: 399 GGSFPAITAREPWDGRDGELPVEDDIDLSDVELD-DLEKDEL 439



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>PDIA6_CAEEL (Q11067) Probable protein disulfide-isomerase A6 precursor (EC|
           5.3.4.1)
          Length = 440

 Score =  120 bits (300), Expect = 3e-27
 Identities = 59/150 (39%), Positives = 90/150 (60%), Gaps = 2/150 (1%)
 Frame = -1

Query: 545 VMEEKCASAAICFVSFLPDILDSKAEGRNKYLELLLSVAEKFKKSPYSFVWAGAGKQADL 366
           V+E+ C    +C  +FLP ILD ++E RN YL +L   +EKFKK+ + ++W     Q  L
Sbjct: 289 VVEDACKEKQLCIFAFLPHILDCQSECRNNYLAMLKEQSEKFKKNLWGWIWVEGAAQPAL 348

Query: 365 XKQVGVGGYGYPAMVALNVKKGAYAPLRSAFELAEITEFVKEA--GRGGKGNLPLEGAPT 192
            +   VGG+GYPAM ALN +K  YA L+ +F    I EF+++   G+G   +L  +G P 
Sbjct: 349 EESFEVGGFGYPAMTALNFRKNKYAVLKGSFGKDGIHEFLRDLSYGKGRTSSLRGDGFPK 408

Query: 191 VVQSEPWDGKDGEVIEEDEFSLEELMADSS 102
           + ++E WDGKDG +  ED+  L ++  D +
Sbjct: 409 IQKTEKWDGKDGALPAEDDIDLSDIDLDKT 438



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>MUTS_DESVH (P61666) DNA mismatch repair protein mutS|
          Length = 905

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -1

Query: 344 GYGYPAMVALNVKKGAYAPLRSAFELAEITEFVKEA-GRGGKGNLPLEGAPTVVQS 180
           G   PAM  L   +    P RS F+L   TE V  A G    G+L LEG P +V++
Sbjct: 183 GVDTPAMATLGTTQTVRVPARSHFDLKSGTERVMRAQGVADLGSLGLEGKPELVRA 238



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>ZAN_PIG (Q28983) Zonadhesin precursor|
          Length = 2476

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
 Frame = -2

Query: 538 KRSVLLLPFAL---CLSSQTSWTQRQKEETSTLSCYYLLLRNLRRVHTVLSGQ 389
           +RS LL P      CLS    +TQR +   +TL  Y  +L ++R+ HT+ SGQ
Sbjct: 47  QRSALLSPLIQSSGCLSLSFQYTQRGQASGATLMVYASVLGSIRK-HTLFSGQ 98



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>YAI1_ENCCU (Q8SU96) Hypothetical protein ECU10_1810|
          Length = 621

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = -1

Query: 287 LRSAFELAEITEFVKEAGRGGKGNLPLEGAPTVVQSEPWDGKDGEVIEED---EFSLEEL 117
           LR+A EL  + E  K  G+G K     +G+  V      + KD E +EE    E SLEE+
Sbjct: 345 LRNALELLRMEEKEKSKGKGKKKKGGKKGSGEVTAKMEEEKKDSEEVEESAEAEVSLEEM 404



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>YRS7_CAEEL (Q10003) Hypothetical protein T05H10.7|
          Length = 796

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = -1

Query: 551 ADVMEEKCASAAICFVSFLPDILDSKAEGRNKYLELLLSVAEKFKKSPY 405
           ADVM+    +  I F SF PDI    A  +NKY  L L V E  + +P+
Sbjct: 580 ADVMKH-AGNRRIMFSSFDPDICSMVATKQNKYPVLFLCVGETQRYTPF 627



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>PRPP_HUMAN (P81489) Salivary proline-rich protein II-1 (Fragment)|
          Length = 174

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 179 PTGPPSGRPPEEGCPFRRALPPSQ 250
           P G P GRPP++G P +   PP Q
Sbjct: 100 PPGKPEGRPPQQGGPGKPERPPPQ 123



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>PDIA4_CAEEL (P34329) Probable protein disulfide-isomerase A4 precursor (EC|
           5.3.4.1) (ERp-72 homolog)
          Length = 618

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
 Frame = -1

Query: 470 EGRNKYLELLLSVAEKFKKSPYSFVWAGAGKQADLXKQVGVGGYGYPAMVAL---NVKKG 300
           EG   +   +L++A+K++K  Y F  A   + A   +++G+G  G    V +   + KK 
Sbjct: 398 EGSEYWRSKVLNIAQKYQKDKYKFAVADEEEFAKELEELGLGDSGLEHNVVVFGYDGKKY 457

Query: 299 AYAPLRSAFELAEITEFVKEAGRGGKGNLPLEGAP 195
              P     EL E  E   +    GK    ++ AP
Sbjct: 458 PMNPDEFDGELDENLEAFMKQISSGKAKAHVKSAP 492



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>SYC_BACSK (Q5WLT3) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA|
           ligase) (CysRS)
          Length = 466

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 24/72 (33%), Positives = 35/72 (48%)
 Frame = -1

Query: 515 ICFVSFLPDILDSKAEGRNKYLELLLSVAEKFKKSPYSFVWAGAGKQADLXKQVGVGGYG 336
           + FVS   D+ D      N+  E + +VAE+F K+ Y+   A   K+ADL  +V      
Sbjct: 61  VTFVSNFTDVDDKIIRAANELGEEVAAVAERFIKAYYADTCALNVKEADLHPRVTETMDD 120

Query: 335 YPAMVALNVKKG 300
             A +A   KKG
Sbjct: 121 IIAFIADLEKKG 132



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>PEB1_DROME (Q9U6L5) Ejaculatory bulb-specific protein 1 precursor (Ejaculatory|
           bulb-specific protein I) (PEB-me)
          Length = 377

 Score = 26.9 bits (58), Expect(2) = 3.8
 Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 13/57 (22%)
 Frame = -1

Query: 413 SPYSFVWAGAGKQADLXKQV-------------GVGGYGYPAMVALNVKKGAYAPLR 282
           S YS + AG GK +DL   +             G+ GY YP    L    G Y P R
Sbjct: 89  SGYSKISAGVGKGSDLITIIKNTRSYDPYLIPPGIPGYNYPLGWPLRYPLGPYWPNR 145



 Score = 21.9 bits (45), Expect(2) = 3.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 222 GQPSSGGRPDGGP 184
           G+PS GG   GGP
Sbjct: 179 GEPSPGGPSPGGP 191



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>GUNC_PSEFL (P27033) Endoglucanase C precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Cellulase) (EGC)
           (Cellodextrinase C)
          Length = 748

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
 Frame = +1

Query: 241 SFTNSVISASSKALRSGA-----YAPFFTLR-ATMAGXXXXXXXXCFXRSACLPAPAQTK 402
           S ++SV+S+SS ++ SG      Y   + L  +T +G        C   S C   PA   
Sbjct: 164 SSSSSVVSSSSSSVVSGGGQCNWYGTLYPLCVSTTSGWGYENNRSCISPSTCSAQPAPYG 223

Query: 403 LYG-----LFLNFSATDSSSSRYLFLPSAFESRMSGRKDTKQMAAEAHFSSXTSAL 555
           + G       ++ S+  SSSS  +  PS+  S          +++ +  SS +S++
Sbjct: 224 IVGGSSSPSSISSSSVRSSSSSSVVPPSSSSSSSVPSSSCSSVSSSSVVSSSSSSV 279



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>PURT_ECOLI (P33221) Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)|
           (GART 2) (GAR transformylase 2)
           (5'-phosphoribosylglycinamide transformylase 2)
           (Formate-dependent GAR transformylase)
          Length = 391

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = -1

Query: 350 VGGYGYPAMV--ALNVKKGAYAPLRSAFELAEITEFVKEAGRGGKGNLPLEG 201
           V   GYP +V   ++        +RSA +LA+  ++ ++ GR G G + +EG
Sbjct: 144 VADIGYPCIVKPVMSSSGKGQTFIRSAEQLAQAWKYAQQGGRAGAGRVIVEG 195



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>DEDD2_MOUSE (Q8QZV0) DNA-binding death effector domain-containing protein 2|
           (FADD-like anti-apoptotic molecule 3) (DED-containing
           protein FLAME-3)
          Length = 330

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = -3

Query: 390 RRRQAS*SXEAGRSRWLWLSSHGRSQREERRIRSAP*RLRARRNHRVCEGGRARRK-GQP 214
           RRRQAS S ++ +S+W   S   + QR  R   S+  R R R      +  +  ++ G+P
Sbjct: 133 RRRQASSSSDSPQSQWDTGSPPTKRQRRSRGRPSSGARQRRRAGLAASQQHQQHQELGRP 192

Query: 213 SSGGR 199
           SS G+
Sbjct: 193 SSEGK 197



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>PUR7_FUSNN (Q8REV1) Phosphoribosylaminoimidazole-succinocarboxamide synthase|
           (EC 6.3.2.6) (SAICAR synthetase)
          Length = 237

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = -1

Query: 287 LRSAFELAEIT--EFVKEAGRGGKGNLPLEGAPTVVQSEPWDGKDGEVIEEDEF 132
           L+  F+   IT  +F  E G+  KG + L    T      WD K GE +++D F
Sbjct: 162 LKEKFDNIGITLVDFKIEFGKNSKGEILLADEITPDTCRLWDKKTGEKLDKDRF 215


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,570,551
Number of Sequences: 219361
Number of extensions: 1441832
Number of successful extensions: 6008
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5990
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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