ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63h21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EGL44_CAEEL (Q19849) Transcription enhancer factor-like protein ... 32 0.74
2ACDA1_ARCFU (O29165) Acetyl-CoA decarbonylase/synthase complex a... 30 2.8

>EGL44_CAEEL (Q19849) Transcription enhancer factor-like protein egl-44|
           (Egg-laying defective protein 44)
          Length = 465

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
 Frame = +3

Query: 240 FPEKTGKLLRKLKEASXSKH----KSCWLEMTQSSDVNNC 347
           F EK  KLLR+L E S  K       CW  +  S DV NC
Sbjct: 299 FYEKYPKLLRELFEKSEKKDVFFLAKCWANINVSDDVQNC 338



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>ACDA1_ARCFU (O29165) Acetyl-CoA decarbonylase/synthase complex alpha subunit 1|
           (EC 1.2.99.2) (ACDS complex alpha subunit 1) (ACDS
           complex carbon monoxide dehydrogenase 1) (ACDS CODH 1)
          Length = 802

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
 Frame = +3

Query: 216 KQPGLFPCFPEKTGKLLRKLKEASXSKH----KSCWLEMTQS--SDVNNCSRC 356
           K PG+F   PEK G++   + EA   KH    K  + E  ++   ++N C++C
Sbjct: 356 KLPGVFLPIPEKVGQVAPLVAEAIFKKHGGERKYKFFESDEALMEEINKCTQC 408


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,015,686
Number of Sequences: 219361
Number of extensions: 1033303
Number of successful extensions: 2007
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2006
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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