Clone Name
rbah63h19
Clone Library Name
barley_pub
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
chloroplast precursor (RuBisCO activase A) (RA A)
Length = 464
Score = 195 bits (496), Expect(2) = 3e-69
Identities = 96/96 (100%), Positives = 96/96 (100%)
Frame = -1
Query: 563 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 384
IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV
Sbjct: 332 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 391
Query: 383 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 276
QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG
Sbjct: 392 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 427
Score = 86.3 bits (212), Expect(2) = 3e-69
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -3
Query: 228 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 115
GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF
Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
chloroplast precursor (RuBisCO activase) (RA)
Length = 474
Score = 154 bits (390), Expect(2) = 2e-51
Identities = 75/96 (78%), Positives = 86/96 (89%)
Frame = -1
Query: 563 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 384
IDFFGALRARVYDDEVRK+V S G+E IGKRLVNSR+GP FEQP+MT EKL+EYG+MLV
Sbjct: 342 IDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLV 401
Query: 383 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 276
EQ+NVKRVQLA+TY+SQAALGDAN DA+ G+FYG
Sbjct: 402 MEQENVKRVQLAETYLSQAALGDANADAIGRGTFYG 437
Score = 67.8 bits (164), Expect(2) = 2e-51
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = -3
Query: 228 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 115
GKGAQQ LPVPEGCTD A+N+DPTARSDDG+C+Y F
Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
chloroplast precursor (RuBisCO activase 1) (RA 1)
(RubisCO activase alpha form)
Length = 476
Score = 155 bits (392), Expect(2) = 2e-51
Identities = 73/96 (76%), Positives = 85/96 (88%)
Frame = -1
Query: 563 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 384
IDFFGALRARVY DEVRKWV G++ IGK+LVNS++GP +FEQPKMT++KLL YG MLV
Sbjct: 342 IDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLV 401
Query: 383 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 276
QEQ+NVKRVQLAD YMS+AALGDAN DA+K G+FYG
Sbjct: 402 QEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYG 437
Score = 66.6 bits (161), Expect(2) = 2e-51
Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
Frame = -3
Query: 231 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 115
GG+ AQQ G +PVPEGCTD A NYDPTARSDDGSC+Y F
Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
chloroplast precursor (RuBisCO activase) (RA)
Length = 472
Score = 156 bits (395), Expect(2) = 6e-51
Identities = 72/96 (75%), Positives = 87/96 (90%)
Frame = -1
Query: 563 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 384
IDFFGALRARVY DEVRKWV S G++N+GK+LVNS+DGP FEQP+MT++KL+EYG+MLV
Sbjct: 340 IDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLV 399
Query: 383 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 276
QEQ+NVKRVQLAD YMS AALGDAN+DA+ G+F+G
Sbjct: 400 QEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFG 435
Score = 63.9 bits (154), Expect(2) = 6e-51
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = -3
Query: 228 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 121
GK AQQ +LPV +GCTD AKNYDPTARSDDGSC Y
Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
chloroplast precursor (RuBisCO activase B) (RA B)
Length = 425
Score = 171 bits (433), Expect = 1e-42
Identities = 80/96 (83%), Positives = 89/96 (92%)
Frame = -1
Query: 563 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 384
IDFFGALRARVYDDEVRKWVG G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLV
Sbjct: 329 IDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLV 388
Query: 383 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 276
QEQ+NVKRVQLAD Y+S+AALG AN DAMKTG+FYG
Sbjct: 389 QEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 424
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
chloroplast precursor (RuBisCO activase) (RA)
Length = 432
Score = 170 bits (431), Expect = 2e-42
Identities = 80/96 (83%), Positives = 90/96 (93%)
Frame = -1
Query: 563 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 384
IDFFGALRARVYDDEVRKWV TG+ENIGKRLVNSR+GP FEQPKMT+EKL+EYG+MLV
Sbjct: 332 IDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLV 391
Query: 383 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 276
+EQ+NVKRVQLA+ Y+S+AALGDAN DAMKTGSFYG
Sbjct: 392 KEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 427
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
chloroplast precursor (RuBisCO activase) (RA)
Length = 437
Score = 164 bits (416), Expect = 1e-40
Identities = 76/96 (79%), Positives = 89/96 (92%)
Frame = -1
Query: 563 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 384
IDFFGALRARVYDDEVRKW+ G+++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLV
Sbjct: 342 IDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLV 401
Query: 383 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 276
QEQ+NVKRVQLAD Y+S+AALGDAN DAM TG+FYG
Sbjct: 402 QEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
chloroplast precursor (RuBisCO activase) (RA)
Length = 433
Score = 162 bits (410), Expect = 6e-40
Identities = 74/95 (77%), Positives = 89/95 (93%)
Frame = -1
Query: 563 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 384
IDFFGALRARVYDDEVR+WV TG+ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV
Sbjct: 338 IDFFGALRARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLV 397
Query: 383 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 279
EQ+NVKRVQLAD Y+++AALG+AN+DAMKTGSF+
Sbjct: 398 AEQENVKRVQLADKYLNEAALGEANEDAMKTGSFF 432
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
chloroplast precursor (RuBisCO activase 2) (RA 2)
(RubisCO activase beta form)
Length = 435
Score = 158 bits (399), Expect = 1e-38
Identities = 73/94 (77%), Positives = 87/94 (92%)
Frame = -1
Query: 563 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 384
IDFFGALRARVYDDEVRKWV G++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV
Sbjct: 342 IDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLV 401
Query: 383 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 282
+EQ+NVKRVQLAD YMS+AALGDANQDA+K G+F
Sbjct: 402 EEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
chloroplast precursor (RuBisCO activase 2) (RA 2)
Length = 439
Score = 157 bits (396), Expect = 3e-38
Identities = 76/94 (80%), Positives = 85/94 (90%)
Frame = -1
Query: 563 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 384
IDFFGALRARVYDDEVRKWV TGIE IG +L+NS DGP TFEQPKMTVEKLLEYG+MLV
Sbjct: 346 IDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLV 405
Query: 383 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 282
QEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG+F
Sbjct: 406 QEQENVKRVQLAETYLKEAALGDANADAINTGNF 439
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
chloroplast precursor (RuBisCO activase 1) (RA 1)
Length = 442
Score = 157 bits (396), Expect = 3e-38
Identities = 75/95 (78%), Positives = 84/95 (88%)
Frame = -1
Query: 563 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 384
IDFFGALRARVYDDEVRKWV TGIE IG +L+NS DGP TFEQPKMT+EKLLEYG+MLV
Sbjct: 346 IDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLV 405
Query: 383 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 279
QEQ+NVKRVQLAD Y+ +AALGDAN DA+ GSF+
Sbjct: 406 QEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
chloroplast precursor (RuBisCO activase) (RA)
Length = 459
Score = 156 bits (395), Expect = 3e-38
Identities = 75/92 (81%), Positives = 85/92 (92%)
Frame = -1
Query: 563 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 384
IDFFGALRARVYDDEVRKWV TGIE IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLV
Sbjct: 341 IDFFGALRARVYDDEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLV 400
Query: 383 QEQDNVKRVQLADTYMSQAALGDANQDAMKTG 288
QEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG
Sbjct: 401 QEQENVKRVQLAETYLKEAALGDANADAINTG 432
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
chloroplast precursor (RuBisCO activase) (RA)
Length = 439
Score = 150 bits (379), Expect = 2e-36
Identities = 67/95 (70%), Positives = 88/95 (92%)
Frame = -1
Query: 563 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 384
IDFFGALRARVYDDEVRKW+ G++ GK+LVNS++GP TF+QPKM+++KLL+YG+MLV
Sbjct: 344 IDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLV 403
Query: 383 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 279
QEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 404 QEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
chloroplast precursor (RuBisCO activase) (RA)
Length = 441
Score = 149 bits (377), Expect = 4e-36
Identities = 67/95 (70%), Positives = 87/95 (91%)
Frame = -1
Query: 563 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 384
IDFFGALRARVYDDEVRKW+ G++++GK+LVNS++GP TF+QPKMT++KLL Y MLV
Sbjct: 346 IDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLV 405
Query: 383 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 279
QEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 406 QEQENVKRVQLADQYLNEAALGNANEDAIKSGSFF 440
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
chloroplast precursor (RuBisCO activase) (RA)
Length = 413
Score = 115 bits (287), Expect = 1e-25
Identities = 53/71 (74%), Positives = 62/71 (87%)
Frame = -1
Query: 563 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 384
IDFFGALRARVYDDEVRKW G+E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV
Sbjct: 339 IDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLV 398
Query: 383 QEQDNVKRVQL 351
EQ+NVKRV+L
Sbjct: 399 MEQENVKRVKL 409
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
chloroplast precursor (RuBisCO activase) (RA)
Length = 408
Score = 94.0 bits (232), Expect = 3e-19
Identities = 47/81 (58%), Positives = 60/81 (74%)
Frame = -1
Query: 563 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 384
IDFFGALRARVYDD VR+W+ TG++ IG++LVN+R V + M + L++YG LV
Sbjct: 315 IDFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLV 373
Query: 383 QEQDNVKRVQLADTYMSQAAL 321
EQ+NVKRVQLAD Y+S A L
Sbjct: 374 DEQENVKRVQLADAYLSGAEL 394
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
(RuBisCO activase) (RA)
Length = 415
Score = 75.1 bits (183), Expect = 1e-13
Identities = 32/75 (42%), Positives = 50/75 (66%)
Frame = -1
Query: 563 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 384
IDFF ALR+R+YD+++R ++ G EN+ R+VNS +GP F++P T+ L+E + +V
Sbjct: 215 IDFFSALRSRIYDEQIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMV 274
Query: 383 QEQDNVKRVQLADTY 339
EQ ++ QL D Y
Sbjct: 275 AEQKRIETSQLVDEY 289
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
(RuBisCO activase) (RA)
Length = 414
Score = 68.6 bits (166), Expect = 1e-11
Identities = 31/75 (41%), Positives = 48/75 (64%)
Frame = -1
Query: 563 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 384
IDFF ALR+R+YD ++R ++ G E I R+VNS + P F++P ++ L+E G++++
Sbjct: 215 IDFFSALRSRIYDIQIRDFIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVL 274
Query: 383 QEQDNVKRVQLADTY 339
EQ V QL D Y
Sbjct: 275 GEQQRVDNSQLVDEY 289
>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)|
(EF-1AO) (42S p48)
Length = 461
Score = 31.6 bits (70), Expect = 1.6
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Frame = -1
Query: 446 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 291
VTF +T E K +E H +QE NVK + + D A N M+
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337
Query: 290 GSFYG*KILHTHPPSLAA 237
GSF I+ HP ++A
Sbjct: 338 GSFTAQVIILNHPGQISA 355
>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
chloroplast (RuBisCO activase) (RA) (Fragments)
Length = 32
Score = 30.8 bits (68), Expect = 2.8
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 458 RDGPVTFEQPKMTVEK 411
R+GP TFEQP MT+EK
Sbjct: 17 REGPPTFEQPAMTIEK 32
>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)|
Length = 464
Score = 30.0 bits (66), Expect = 4.7
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
Frame = -1
Query: 446 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 291
VTF +T E K +E H +QE NVK + + D A N A +T
Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337
Query: 290 GSFYG*KILHTHPPSLAA 237
F I+ HP ++A
Sbjct: 338 KMFTAQVIIMNHPGQISA 355
>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
Length = 1346
Score = 30.0 bits (66), Expect = 4.7
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 343 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 447
+ +SC+R TL T CP SS +TVI+ C ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453
>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
Length = 521
Score = 29.6 bits (65), Expect = 6.1
Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = -1
Query: 509 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 402
W+GS I+ G+RL++SRD +T E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257
>EF1A0_XENLA (P13549) Elongation factor 1-alpha, somatic form (EF-1-alpha-S)|
Length = 462
Score = 29.3 bits (64), Expect = 8.0
Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
Frame = -1
Query: 446 VTFEQPKMTVE-KLLEYGHMLVQEQD-------NVKRVQLADTYMSQAALGDANQDAMKT 291
VTF +T E K +E H + E NVK V + D A N M+
Sbjct: 278 VTFAPVNVTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEA 337
Query: 290 GSFYG*KILHTHPPSLAA 237
GSF I+ HP + A
Sbjct: 338 GSFTAQVIILNHPGQIGA 355
Database: uniprot_sprot.fasta
Posted date: May 25, 2006 5:36 PM
Number of letters in database: 80,573,946
Number of sequences in database: 219,361
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,980,116
Number of Sequences: 219361
Number of extensions: 1582004
Number of successful extensions: 4799
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4797
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)