ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63h18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5... 823 0.0
2gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA... 823 0.0
3gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c... 617 e-173
4gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox... 226 5e-56
5gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox... 226 5e-56
6gb|AY110044.1| Zea mays CL1146_1 mRNA sequence 210 3e-51
7gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome... 139 9e-30
8gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome... 139 9e-30
9dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ... 139 9e-30
10dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 139 9e-30
11dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 9e-30
12dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 9e-30
13dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 9e-30
14dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 9e-30
15dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 9e-30
16gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 139 9e-30
17dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s... 139 9e-30
18dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l... 139 9e-30
19gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ... 137 3e-29
20gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ... 137 3e-29
21gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb... 131 2e-27
22gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca... 131 2e-27
23gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ... 121 2e-24
24gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ... 121 2e-24
25gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR... 100 7e-18
26gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR... 100 7e-18
27gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form... 98 3e-17
28gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for... 98 3e-17
29gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo... 78 3e-11
30gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA 78 3e-11
31emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putat... 78 3e-11
32gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre... 56 1e-04
33gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) ... 54 4e-04
34gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate car... 54 4e-04
35gb|DQ123944.1| Coffea arabica x Coffea canephora clone HT-SSH2-H... 48 0.024
36emb|Y10657.1|CLRCAGENE C.littorale rca gene 48 0.024
37gb|AC140331.2| Mus musculus BAC clone RP23-406J20 from chromosom... 42 1.5
38ref|XM_974982.1| PREDICTED: Mus musculus desmoplakin (Dsp), mRNA 42 1.5
39ref|XM_912083.2| PREDICTED: Mus musculus desmoplakin, transcript... 42 1.5
40ref|XM_621314.3| PREDICTED: Mus musculus desmoplakin, transcript... 42 1.5
41gb|AC124549.5| Mus musculus BAC clone RP23-284E24 from 13, compl... 42 1.5
42dbj|AK009006.1| Mus musculus adult male tongue cDNA, RIKEN full-... 42 1.5
43gb|BC033467.1| Mus musculus desmoplakin, mRNA (cDNA clone IMAGE:... 42 1.5
44gb|AC155204.4| Colobus guereza clone CH272-163G5, complete sequence 40 5.9
45gb|BC033474.1| Homo sapiens renin, mRNA (cDNA clone MGC:34221 IM... 40 5.9
46gb|AY664490.1| Macaca fascicularis renin (REN) mRNA, complete cds 40 5.9
47gb|BC047752.1| Homo sapiens renin, mRNA (cDNA clone MGC:54147 IM... 40 5.9
48gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence 40 5.9
49gb|AC091381.3| Papio anubis clone RP41-468N20, complete sequence 40 5.9
50gb|AC124814.10| Mus musculus chromosome 1, clone RP24-119P5, com... 40 5.9
51ref|NM_001032916.1| Macaca mulatta prorenin (REN), mRNA 40 5.9
52ref|XM_743857.1| Aspergillus fumigatus Af293 hypothetical protei... 40 5.9
53gb|L00071.1|HUMREN08 Human renin gene, exon 8 40 5.9
54gb|AC093889.2| Homo sapiens BAC clone RP11-671G14 from 7, comple... 40 5.9
55ref|NM_000537.2| Homo sapiens renin (REN), mRNA 40 5.9
56emb|AL592146.8| Human DNA sequence from clone RP11-74C13 on chro... 40 5.9
57gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 5.9
58emb|CR933822.8| Zebrafish DNA sequence from clone DKEY-30F7 in l... 40 5.9
59emb|X00063.1|HSRENK Human kidney mRNA fragment for renin (aa 105... 40 5.9
60emb|CR926484.1| Pongo pygmaeus mRNA; cDNA DKFZp469I191 (from clo... 40 5.9
61emb|CR536498.1| Homo sapiens full open reading frame cDNA clone ... 40 5.9
62gb|AY436324.1| Homo sapiens renin (REN) gene, complete cds 40 5.9
63emb|AJ132342.1|CJA132342 Callithrix jacchus mRNA for preprorenin 40 5.9
64emb|AL589679.14| Mouse DNA sequence from clone RP23-189A16 on ch... 40 5.9
65emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosph... 40 5.9
66gb|M10151.1|HUMRENA4 Homo sapiens renin (REN) gene, exons 6, 7, ... 40 5.9
67gb|DP000005.1| Macaca mulatta target 1 genomic scaffold 40 5.9
68gb|AC024259.17| Homo sapiens chromosome 7 clone RP11-105B19, com... 40 5.9
69gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 5.9
70gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 40 5.9
71gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold 40 5.9
72gb|AC123966.4| Macaca mulatta clone CH250-72H9, complete sequence 40 5.9
73gb|AC154224.1| Mus musculus BAC clone RP24-141J15 from chromosom... 40 5.9
74gb|AF193454.1|F193446S09 Pan troglodytes renin (REN) gene, exon 8 40 5.9
75gb|AC098590.3| Homo sapiens BAC clone RP11-324J13 from 4, comple... 40 5.9
76ref|NM_001009122.1| Pan troglodytes renin (REN), mRNA 40 5.9
77gb|AC079378.2| Rattus norvegicus strain Brown Norway chromosome ... 40 5.9
78gb|AY662332.2| Macaca mulatta prorenin (REN) mRNA, complete cds 40 5.9
79emb|BX936423.12| Zebrafish DNA sequence from clone DKEY-174M14 i... 40 5.9
80gb|AC154184.1| Mus musculus BAC clone RP24-67K24 from 13, comple... 40 5.9
81gb|AC138437.3| Cercopithecus aethiops clone CH252-390I5, complet... 40 5.9
82gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precurso... 40 5.9
83emb|AL805929.7| Mouse DNA sequence from clone RP23-252O5 on chro... 40 5.9 
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  823 bits (415), Expect = 0.0
 Identities = 433/438 (98%), Gaps = 1/438 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttaagaacntatacaattcctttctctttcaagaagagacttacaattgggttacctgtg 60
            |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 4196 ttaagaacatatacaattcctt-ctctttcaagaagagacttacaattgggttacctgtg 4138

                                                                        
Query: 61   cggcgatgaatcaaaaagtttgagtggatttcgggtccaaaatagtccaacatatatata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4137 cggcgatgaatcaaaaagtttgagtggatttcgggtccaaaatagtccaacatatatata 4078

                                                                        
Query: 121  gtgcatgcatgcatcttaagtagagtaggaccttctacttgccgtagaaggcaccggtct 180
            ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4077 gtgcatgcatcgatcttaagtagagtaggaccttctacttgccgtagaaggcaccggtct 4018

                                                                        
Query: 181  tcatggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcgagct 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4017 tcatggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcgagct 3958

                                                                        
Query: 241  gcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagcttct 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3957 gcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagcttct 3898

                                                                        
Query: 301  ctatggtcatcttgggctggtcgaacgtgggcggcccctccctcgagttgacgaggcgct 360
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 3897 ctatggtcatcttgggctggtcgaacgtgggcggcccctccctggagttgacgaggcgct 3838

                                                                        
Query: 361  tggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtacaccc 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3837 tggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtacaccc 3778

                              
Query: 421  gtgcccgcagcgcgccga 438
            ||||||||||||||||||
Sbjct: 3777 gtgcccgcagcgcgccga 3760



 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 158/194 (81%)
 Strand = Plus / Minus

                                                                        
Query: 237  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 296
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 7229 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 7170

                                                                        
Query: 297  ttctctatggtcatcttgggctggtcgaacgtgggcggcccctccctcgagttgacgagg 356
            ||||| |  |||||||| ||||| ||||| ||    ||||| |||| |||||| || || 
Sbjct: 7169 ttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccagc 7110

                                                                        
Query: 357  cgcttggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 416
            | ||||   |||||||| |  ||| |   ||||||||||||||||||||| |||||||||
Sbjct: 7109 ctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcgtcgtac 7050

                          
Query: 417  acccgtgcccgcag 430
            ||||| || |||||
Sbjct: 7049 acccgagcacgcag 7036
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>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score =  823 bits (415), Expect = 0.0
 Identities = 433/438 (98%), Gaps = 1/438 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttaagaacntatacaattcctttctctttcaagaagagacttacaattgggttacctgtg 60
            |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1627 ttaagaacatatacaattcctt-ctctttcaagaagagacttacaattgggttacctgtg 1569

                                                                        
Query: 61   cggcgatgaatcaaaaagtttgagtggatttcgggtccaaaatagtccaacatatatata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1568 cggcgatgaatcaaaaagtttgagtggatttcgggtccaaaatagtccaacatatatata 1509

                                                                        
Query: 121  gtgcatgcatgcatcttaagtagagtaggaccttctacttgccgtagaaggcaccggtct 180
            ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1508 gtgcatgcatcgatcttaagtagagtaggaccttctacttgccgtagaaggcaccggtct 1449

                                                                        
Query: 181  tcatggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcgagct 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1448 tcatggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcgagct 1389

                                                                        
Query: 241  gcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagcttct 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1388 gcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagcttct 1329

                                                                        
Query: 301  ctatggtcatcttgggctggtcgaacgtgggcggcccctccctcgagttgacgaggcgct 360
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1328 ctatggtcatcttgggctggtcgaacgtgggcggcccctccctggagttgacgaggcgct 1269

                                                                        
Query: 361  tggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtacaccc 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1268 tggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtacaccc 1209

                              
Query: 421  gtgcccgcagcgcgccga 438
            ||||||||||||||||||
Sbjct: 1208 gtgcccgcagcgcgccga 1191
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>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1525

 Score =  617 bits (311), Expect = e-173
 Identities = 409/441 (92%), Gaps = 12/441 (2%)
 Strand = Plus / Minus

                                                                        
Query: 6    aacntatacaattcctttctctttcaagaagagacttacaattgggttacctgtgcggcg 65
            ||| |||||||||   |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1477 aacatatacaattggattctctttcaagaagagacttacaattgggctacctgtgcggcg 1418

                                                                        
Query: 66   atgaatcaaaaagtttgagtggatttcgggtccaaaatagtccaacatatatatagtgca 125
            ||||||||||||||||||||||||| || |||||||||| |||| |||||||||||||||
Sbjct: 1417 atgaatcaaaaagtttgagtggatt-cgagtccaaaatattccagcatatatatagtgca 1359

                                                                        
Query: 126  tgcatgca--------tcttaagtagagtaggaccttctacttgccgtagaaggcaccgg 177
            ||||||||        |||||||||   |||||| |||||||||||||||||||| ||||
Sbjct: 1358 tgcatgcacgcatgcatcttaagta---taggactttctacttgccgtagaaggcgccgg 1302

                                                                        
Query: 178  tcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcga 237
            ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1301 tcgccatggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcga 1242

                                                                        
Query: 238  gctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagct 297
            ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1241 gctgcacgcgcttcacgttctcctgctcctggaccagcatgtggccgtactccatgagct 1182

                                                                        
Query: 298  tctctatggtcatcttgggctggtcgaacgtgggcggcccctccctcgagttgacgaggc 357
            |||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||| |
Sbjct: 1181 tctcgatggtcatcttgggctggtcgaacgtcggcggcccctccctggagttgacgagcc 1122

                                                                        
Query: 358  gcttggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtaca 417
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1121 gcttggagatgttctcgacgccgatctcgccgacccacttgcgcacctcgtcgtcgtaca 1062

                                 
Query: 418  cccgtgcccgcagcgcgccga 438
            |||| ||||||||||||||||
Sbjct: 1061 cccgcgcccgcagcgcgccga 1041
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>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score =  226 bits (114), Expect = 5e-56
 Identities = 225/262 (85%)
 Strand = Plus / Minus

                                                                       
Query: 177 gtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcg 236
           |||||||||||||| ||||||||||  || || || |||||| ||||||||||||| || 
Sbjct: 908 gtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggtacttgtcagca 849

                                                                       
Query: 237 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 296
           ||||||||||||||||||||||||||||||   ||||||||||| |||||||||| ||||
Sbjct: 848 agctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgtactccaagagc 789

                                                                       
Query: 297 ttctctatggtcatcttgggctggtcgaacgtgggcggcccctccctcgagttgacgagg 356
           ||||| || || ||||||||||| |||||||||||||| |||||| | ||||||||||| 
Sbjct: 788 ttctcgatcgttatcttgggctgctcgaacgtgggcgggccctccttggagttgacgagc 729

                                                                       
Query: 357 cgcttggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 416
             | ||| ||||||||| |||||| ||||||  ||||||   || |||||||||||||| 
Sbjct: 728 ttcctggcgatgttctcgacgccggtctcgctcacccaccgtcggacctcgtcgtcgtag 669

                                 
Query: 417 acccgtgcccgcagcgcgccga 438
           ||||| || |||||||||||||
Sbjct: 668 acccgggcacgcagcgcgccga 647
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>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            precursor (rca1) mRNA, complete cds
          Length = 1424

 Score =  226 bits (114), Expect = 5e-56
 Identities = 225/262 (85%)
 Strand = Plus / Minus

                                                                        
Query: 177  gtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcg 236
            |||||||||||||| ||||||||||  || || || |||||| ||||||||||||| || 
Sbjct: 1303 gtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggtacttgtcagca 1244

                                                                        
Query: 237  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 296
            ||||||||||||||||||||||||||||||   ||||||||||| |||||||||| ||||
Sbjct: 1243 agctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgtactccaagagc 1184

                                                                        
Query: 297  ttctctatggtcatcttgggctggtcgaacgtgggcggcccctccctcgagttgacgagg 356
            ||||| || || ||||||||||| |||||||||||||| |||||| | ||||||||||| 
Sbjct: 1183 ttctcgatcgttatcttgggctgctcgaacgtgggcgggccctccttggagttgacgagc 1124

                                                                        
Query: 357  cgcttggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 416
              | ||| ||||||||| |||||| ||||||  ||||||   || |||||||||||||| 
Sbjct: 1123 ttcctggcgatgttctcgacgccggtctcgctcacccaccgtcggacctcgtcgtcgtag 1064

                                  
Query: 417  acccgtgcccgcagcgcgccga 438
            ||||| || |||||||||||||
Sbjct: 1063 acccgggcacgcagcgcgccga 1042
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>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score =  210 bits (106), Expect = 3e-51
 Identities = 223/262 (85%)
 Strand = Plus / Minus

                                                                        
Query: 177  gtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcg 236
            |||||||||||||| ||||||||||  || || || |||||| ||||||||||||| || 
Sbjct: 1303 gtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggtacttgtcagca 1244

                                                                        
Query: 237  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 296
            ||||||||||||||||||||||||||||||   ||||||||||| |||||||||| ||||
Sbjct: 1243 agctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgtactccaagagc 1184

                                                                        
Query: 297  ttctctatggtcatcttgggctggtcgaacgtgggcggcccctccctcgagttgacgagg 356
            ||||| || || ||||||||||| |||||||||||||| |||||| | ||||||||||| 
Sbjct: 1183 ttctcgatcgttatcttgggctgctcgaacgtgggcgggccctccttggagttgacgagc 1124

                                                                        
Query: 357  cgcttggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 416
              | ||| ||||||||| |||||| ||||||  ||||||   || |||||||||||||| 
Sbjct: 1123 ttcctggcgatgttctcgacgccggtctcgctcacccaccgtcggacctcgtcgtcgtag 1064

                                  
Query: 417  acccgtgcccgcagcgcgccga 438
            |||   || |||||||||||||
Sbjct: 1063 accgtggcacgcagcgcgccga 1042
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>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  139 bits (70), Expect = 9e-30
 Identities = 208/254 (81%)
 Strand = Plus / Plus

                                                                          
Query: 162    ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 221
              |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 108311 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 108370

                                                                          
Query: 222    aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 281
              | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 108371 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 108430

                                                                          
Query: 282    ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 341
              ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 108431 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 108490

                                                                          
Query: 342    ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 401
              |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 108491 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 108550

                            
Query: 402    acctcgtcgtcgta 415
              ||||||||||||||
Sbjct: 108551 acctcgtcgtcgta 108564



 Score =  109 bits (55), Expect = 8e-21
 Identities = 104/120 (86%), Gaps = 4/120 (3%)
 Strand = Plus / Plus

                                                                          
Query: 204    ccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgc 263
              |||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||
Sbjct: 112186 ccgagcgccgcctcgctgaggtacttatcggcgagccgcaccctcttgacgttctcctgc 112245

                                                                          
Query: 264    tcctggaccagcatgt----ggccgtactccatgagcttctctatggtcatcttgggctg 319
              |||   ||||||||||    | ||||||||||| ||||| || || ||||||||||||||
Sbjct: 112246 tccctcaccagcatgtgccggcccgtactccatcagcttgtcgatcgtcatcttgggctg 112305



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                          
Query: 365    gatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgc 424
              |||||||||||| ||||||||  | ||||||   |||||||||||| |||||||||| ||
Sbjct: 112344 gatgttctccaccccgatctccgccacccaccgccgcacctcgtcgccgtacacccgcgc 112403

                            
Query: 425    ccgcagcgcgccga 438
              ||||||||| ||||
Sbjct: 112404 ccgcagcgccccga 112417
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>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  139 bits (70), Expect = 9e-30
 Identities = 208/254 (81%)
 Strand = Plus / Plus

                                                                         
Query: 162   ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 221
             |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 30188 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 30247

                                                                         
Query: 222   aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 281
             | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 30248 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 30307

                                                                         
Query: 282   ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 341
             ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 30308 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 30367

                                                                         
Query: 342   ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 401
             |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 30368 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 30427

                           
Query: 402   acctcgtcgtcgta 415
             ||||||||||||||
Sbjct: 30428 acctcgtcgtcgta 30441



 Score =  109 bits (55), Expect = 8e-21
 Identities = 104/120 (86%), Gaps = 4/120 (3%)
 Strand = Plus / Plus

                                                                         
Query: 204   ccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgc 263
             |||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||
Sbjct: 34063 ccgagcgccgcctcgctgaggtacttatcggcgagccgcaccctcttgacgttctcctgc 34122

                                                                         
Query: 264   tcctggaccagcatgt----ggccgtactccatgagcttctctatggtcatcttgggctg 319
             |||   ||||||||||    | ||||||||||| ||||| || || ||||||||||||||
Sbjct: 34123 tccctcaccagcatgtgccggcccgtactccatcagcttgtcgatcgtcatcttgggctg 34182



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                         
Query: 365   gatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgc 424
             |||||||||||| ||||||||  | ||||||   |||||||||||| |||||||||| ||
Sbjct: 34221 gatgttctccaccccgatctccgccacccaccgccgcacctcgtcgccgtacacccgcgc 34280

                           
Query: 425   ccgcagcgcgccga 438
             ||||||||| ||||
Sbjct: 34281 ccgcagcgccccga 34294
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>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate
            carboxylase activase large isoform precursor protein,
            complete cds, clone: 13YPR038
          Length = 1558

 Score =  139 bits (70), Expect = 9e-30
 Identities = 208/254 (81%)
 Strand = Plus / Minus

                                                                        
Query: 162  ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 221
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1309 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1250

                                                                        
Query: 222  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 281
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1249 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1190

                                                                        
Query: 282  ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 341
            ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 1189 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1130

                                                                        
Query: 342  ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 401
            |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 1129 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1070

                          
Query: 402  acctcgtcgtcgta 415
            ||||||||||||||
Sbjct: 1069 acctcgtcgtcgta 1056
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  139 bits (70), Expect = 9e-30
 Identities = 208/254 (81%)
 Strand = Plus / Plus

                                                                            
Query: 162      ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 221
                |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 28303450 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 28303509

                                                                            
Query: 222      aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 281
                | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 28303510 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 28303569

                                                                            
Query: 282      ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 341
                ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 28303570 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 28303629

                                                                            
Query: 342      ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 401
                |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 28303630 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 28303689

                              
Query: 402      acctcgtcgtcgta 415
                ||||||||||||||
Sbjct: 28303690 acctcgtcgtcgta 28303703



 Score =  109 bits (55), Expect = 8e-21
 Identities = 104/120 (86%), Gaps = 4/120 (3%)
 Strand = Plus / Plus

                                                                            
Query: 204      ccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgc 263
                |||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||
Sbjct: 28307325 ccgagcgccgcctcgctgaggtacttatcggcgagccgcaccctcttgacgttctcctgc 28307384

                                                                            
Query: 264      tcctggaccagcatgt----ggccgtactccatgagcttctctatggtcatcttgggctg 319
                |||   ||||||||||    | ||||||||||| ||||| || || ||||||||||||||
Sbjct: 28307385 tccctcaccagcatgtgccggcccgtactccatcagcttgtcgatcgtcatcttgggctg 28307444



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                            
Query: 365      gatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgc 424
                |||||||||||| ||||||||  | ||||||   |||||||||||| |||||||||| ||
Sbjct: 28307483 gatgttctccaccccgatctccgccacccaccgccgcacctcgtcgccgtacacccgcgc 28307542

                              
Query: 425      ccgcagcgcgccga 438
                ||||||||| ||||
Sbjct: 28307543 ccgcagcgccccga 28307556
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>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
            insert sequence
          Length = 1721

 Score =  139 bits (70), Expect = 9e-30
 Identities = 208/254 (81%)
 Strand = Plus / Minus

                                                                        
Query: 162  ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 221
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1357 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1298

                                                                        
Query: 222  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 281
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1297 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1238

                                                                        
Query: 282  ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 341
            ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 1237 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1178

                                                                        
Query: 342  ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 401
            |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 1177 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1118

                          
Query: 402  acctcgtcgtcgta 415
            ||||||||||||||
Sbjct: 1117 acctcgtcgtcgta 1104
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>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
            insert sequence
          Length = 1682

 Score =  139 bits (70), Expect = 9e-30
 Identities = 208/254 (81%)
 Strand = Plus / Minus

                                                                        
Query: 162  ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 221
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1308 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1249

                                                                        
Query: 222  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 281
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1248 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1189

                                                                        
Query: 282  ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 341
            ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 1188 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1129

                                                                        
Query: 342  ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 401
            |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 1128 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1069

                          
Query: 402  acctcgtcgtcgta 415
            ||||||||||||||
Sbjct: 1068 acctcgtcgtcgta 1055
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>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
            insert sequence
          Length = 1680

 Score =  139 bits (70), Expect = 9e-30
 Identities = 208/254 (81%)
 Strand = Plus / Minus

                                                                        
Query: 162  ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 221
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1346 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1287

                                                                        
Query: 222  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 281
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1286 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1227

                                                                        
Query: 282  ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 341
            ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 1226 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1167

                                                                        
Query: 342  ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 401
            |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 1166 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1107

                          
Query: 402  acctcgtcgtcgta 415
            ||||||||||||||
Sbjct: 1106 acctcgtcgtcgta 1093
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>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
            insert sequence
          Length = 1691

 Score =  139 bits (70), Expect = 9e-30
 Identities = 208/254 (81%)
 Strand = Plus / Minus

                                                                        
Query: 162  ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 221
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1345 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1286

                                                                        
Query: 222  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 281
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1285 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1226

                                                                        
Query: 282  ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 341
            ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 1225 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1166

                                                                        
Query: 342  ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 401
            |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 1165 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1106

                          
Query: 402  acctcgtcgtcgta 415
            ||||||||||||||
Sbjct: 1105 acctcgtcgtcgta 1092
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>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
            insert sequence
          Length = 1470

 Score =  139 bits (70), Expect = 9e-30
 Identities = 208/254 (81%)
 Strand = Plus / Minus

                                                                        
Query: 162  ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 221
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1129 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1070

                                                                        
Query: 222  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 281
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1069 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1010

                                                                        
Query: 282  ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 341
            ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 1009 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 950

                                                                        
Query: 342  ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 401
            |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 949  ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 890

                          
Query: 402  acctcgtcgtcgta 415
            ||||||||||||||
Sbjct: 889  acctcgtcgtcgta 876
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  139 bits (70), Expect = 9e-30
 Identities = 208/254 (81%)
 Strand = Plus / Plus

                                                                            
Query: 162      ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 221
                |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 28285899 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 28285958

                                                                            
Query: 222      aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 281
                | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 28285959 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 28286018

                                                                            
Query: 282      ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 341
                ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 28286019 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 28286078

                                                                            
Query: 342      ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 401
                |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 28286079 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 28286138

                              
Query: 402      acctcgtcgtcgta 415
                ||||||||||||||
Sbjct: 28286139 acctcgtcgtcgta 28286152



 Score =  109 bits (55), Expect = 8e-21
 Identities = 104/120 (86%), Gaps = 4/120 (3%)
 Strand = Plus / Plus

                                                                            
Query: 204      ccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgc 263
                |||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||||
Sbjct: 28289774 ccgagcgccgcctcgctgaggtacttatcggcgagccgcaccctcttgacgttctcctgc 28289833

                                                                            
Query: 264      tcctggaccagcatgt----ggccgtactccatgagcttctctatggtcatcttgggctg 319
                |||   ||||||||||    | ||||||||||| ||||| || || ||||||||||||||
Sbjct: 28289834 tccctcaccagcatgtgccggcccgtactccatcagcttgtcgatcgtcatcttgggctg 28289893



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                            
Query: 365      gatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgc 424
                |||||||||||| ||||||||  | ||||||   |||||||||||| |||||||||| ||
Sbjct: 28289932 gatgttctccaccccgatctccgccacccaccgccgcacctcgtcgccgtacacccgcgc 28289991

                              
Query: 425      ccgcagcgcgccga 438
                ||||||||| ||||
Sbjct: 28289992 ccgcagcgccccga 28290005
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>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
            precursor, complete cds
          Length = 1706

 Score =  139 bits (70), Expect = 9e-30
 Identities = 208/254 (81%)
 Strand = Plus / Minus

                                                                        
Query: 162  ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 221
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1350 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1291

                                                                        
Query: 222  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 281
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1290 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1231

                                                                        
Query: 282  ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 341
            ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 1230 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1171

                                                                        
Query: 342  ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 401
            |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 1170 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1111

                          
Query: 402  acctcgtcgtcgta 415
            ||||||||||||||
Sbjct: 1110 acctcgtcgtcgta 1097
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>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
            precursor, complete cds
          Length = 1623

 Score =  139 bits (70), Expect = 9e-30
 Identities = 208/254 (81%)
 Strand = Plus / Minus

                                                                        
Query: 162  ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 221
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1344 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1285

                                                                        
Query: 222  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 281
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1284 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1225

                                                                        
Query: 282  ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 341
            ||||||||||||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 1224 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1165

                                                                        
Query: 342  ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 401
            |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 1164 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1105

                          
Query: 402  acctcgtcgtcgta 415
            ||||||||||||||
Sbjct: 1104 acctcgtcgtcgta 1091
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>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  137 bits (69), Expect = 3e-29
 Identities = 114/129 (88%)
 Strand = Plus / Minus

                                                                       
Query: 213 gcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacc 272
           |||||||| |||||||||||||| |||||||| | ||| ||||||||||||||||| |||
Sbjct: 952 gcctcgctcaggtacttgtcggccagctgcaccctcttcacgttctcctgctcctgcacc 893

                                                                       
Query: 273 agcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggc 332
           ||||||| |||||||||||  ||||| || | |||||||||||||||  ||||||| |||
Sbjct: 892 agcatgttgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggc 833

                    
Query: 333 ggcccctcc 341
           |||||||||
Sbjct: 832 ggcccctcc 824
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>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  137 bits (69), Expect = 3e-29
 Identities = 114/129 (88%)
 Strand = Plus / Minus

                                                                        
Query: 213  gcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacc 272
            |||||||| |||||||||||||| |||||||| | ||| ||||||||||||||||| |||
Sbjct: 1146 gcctcgctcaggtacttgtcggccagctgcaccctcttcacgttctcctgctcctgcacc 1087

                                                                        
Query: 273  agcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggc 332
            ||||||| |||||||||||  ||||| || | |||||||||||||||  ||||||| |||
Sbjct: 1086 agcatgttgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggc 1027

                     
Query: 333  ggcccctcc 341
            |||||||||
Sbjct: 1026 ggcccctcc 1018
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>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            (rca) mRNA, complete cds
          Length = 1675

 Score =  131 bits (66), Expect = 2e-27
 Identities = 207/254 (81%)
 Strand = Plus / Minus

                                                                        
Query: 162  ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 221
            |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 1314 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1255

                                                                        
Query: 222  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 281
            | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 1254 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1195

                                                                        
Query: 282  ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 341
            |||||||| |||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 1194 ccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1135

                                                                        
Query: 342  ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 401
            |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 1134 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1075

                          
Query: 402  acctcgtcgtcgta 415
            ||||||||||||||
Sbjct: 1074 acctcgtcgtcgta 1061
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>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score =  131 bits (66), Expect = 2e-27
 Identities = 207/254 (81%)
 Strand = Plus / Minus

                                                                       
Query: 162 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 221
           |||||||||| ||| |||||||||||||||  ||| || |  || || || |||||||| 
Sbjct: 563 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 504

                                                                       
Query: 222 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 281
           | |||||  || || |||||||||||||||||||||||||||||||  || |||||||  
Sbjct: 503 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 444

                                                                       
Query: 282 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 341
           |||||||| |||||||| || || |||||||||||||| ||||||   || || ||||||
Sbjct: 443 ccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 384

                                                                       
Query: 342 ctcgagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 401
           |||||||| || || | ||||   ||||||||||| ||  | ||    ||||||||||||
Sbjct: 383 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 324

                         
Query: 402 acctcgtcgtcgta 415
           ||||||||||||||
Sbjct: 323 acctcgtcgtcgta 310
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>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score =  121 bits (61), Expect = 2e-24
 Identities = 112/129 (86%)
 Strand = Plus / Minus

                                                                        
Query: 213  gcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacc 272
            |||||||| |||||||||||||| |||||||| | ||| ||||||||||| ||||| |||
Sbjct: 1253 gcctcgctcaggtacttgtcggccagctgcaccctcttcacgttctcctgttcctgcacc 1194

                                                                        
Query: 273  agcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggc 332
            ||||| | |||||||||||  ||||| || | |||||||||||||||  ||||||| |||
Sbjct: 1193 agcatattgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggc 1134

                     
Query: 333  ggcccctcc 341
            |||||||||
Sbjct: 1133 ggcccctcc 1125
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>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score =  121 bits (61), Expect = 2e-24
 Identities = 112/129 (86%)
 Strand = Plus / Minus

                                                                        
Query: 213  gcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacc 272
            |||||||| |||||||||||||| |||||||| | ||| ||||||||||| ||||| |||
Sbjct: 1116 gcctcgctcaggtacttgtcggccagctgcaccctcttcacgttctcctgttcctgcacc 1057

                                                                        
Query: 273  agcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggc 332
            ||||| | |||||||||||  ||||| || | |||||||||||||||  ||||||| |||
Sbjct: 1056 agcatattgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggc 997

                     
Query: 333  ggcccctcc 341
            |||||||||
Sbjct: 996  ggcccctcc 988
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>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 158/194 (81%)
 Strand = Plus / Minus

                                                                        
Query: 237  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 296
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1346 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 1287

                                                                        
Query: 297  ttctctatggtcatcttgggctggtcgaacgtgggcggcccctccctcgagttgacgagg 356
            ||||| |  |||||||| ||||| ||||| ||    ||||| |||| |||||| || || 
Sbjct: 1286 ttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccagc 1227

                                                                        
Query: 357  cgcttggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 416
            | ||||   |||||||| |  ||| |   ||||||||||||||||||||| |||||||||
Sbjct: 1226 ctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcgtcgtac 1167

                          
Query: 417  acccgtgcccgcag 430
            ||||| || |||||
Sbjct: 1166 acccgagcacgcag 1153
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>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 158/194 (81%)
 Strand = Plus / Minus

                                                                        
Query: 237  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 296
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1091 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 1032

                                                                        
Query: 297  ttctctatggtcatcttgggctggtcgaacgtgggcggcccctccctcgagttgacgagg 356
            ||||| |  |||||||| ||||| ||||| ||    ||||| |||| |||||| || || 
Sbjct: 1031 ttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccagc 972

                                                                        
Query: 357  cgcttggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 416
            | ||||   |||||||| |  ||| |   ||||||||||||||||||||| |||||||||
Sbjct: 971  ctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcgtcgtac 912

                          
Query: 417  acccgtgcccgcag 430
            ||||| || |||||
Sbjct: 911  acccgagcacgcag 898
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>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                        
Query: 237  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 296
            ||||||||||||||||| || |||||||||||||| |||||||||||||||||||  | |
Sbjct: 1277 agctgcacacgcttgacattgtcctgctcctggacaagcatgtggccgtactccagcaac 1218

                                         
Query: 297  ttctctatggtcatcttgggctggtcgaa 325
            ||||| |  |||||||||||||| |||||
Sbjct: 1217 ttctccaccgtcatcttgggctgctcgaa 1189



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 390  acccacttgcgcacctcgtcgtcgtacacccgtgcccgcag 430
            |||||||||||||||||  ||||||||||||| || |||||
Sbjct: 1124 acccacttgcgcacctcaacgtcgtacacccgagcacgcag 1084
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>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                        
Query: 237  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 296
            ||||||||||||||||| || |||||||||||||| |||||||||||||||||||  | |
Sbjct: 1287 agctgcacacgcttgacattgtcctgctcctggacaagcatgtggccgtactccagcaac 1228

                                         
Query: 297  ttctctatggtcatcttgggctggtcgaa 325
            ||||| |  |||||||||||||| |||||
Sbjct: 1227 ttctccaccgtcatcttgggctgctcgaa 1199



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                     
Query: 390  acccacttgcgcacctcgtcgtcgtacacccgtgcccgcag 430
            |||||||||||||||||||||||||||||||| || |||||
Sbjct: 1134 acccacttgcgcacctcgtcgtcgtacacccgagcacgcag 1094
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>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                       
Query: 237 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 296
           ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 416 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 357

                                  
Query: 297 ttctctatggtcatcttgggctg 319
           ||||| |  |||||||| |||||
Sbjct: 356 ttctccactgtcatctttggctg 334



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                    
Query: 390 acccacttgcgcacctcgtcgtcgtacacccgtgcccgcag 430
           |||||||||||||||||||||||||||||||| || |||||
Sbjct: 263 acccacttgcgcacctcgtcgtcgtacacccgagcacgcag 223
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>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                        
Query: 237  agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 296
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1266 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 1207

                                   
Query: 297  ttctctatggtcatcttgggctg 319
            ||||| |  |||||||| |||||
Sbjct: 1206 ttctccactgtcatctttggctg 1184



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                     
Query: 390  acccacttgcgcacctcgtcgtcgtacacccgtgcccgcag 430
            |||||||||||||||||||||||||||||||| || |||||
Sbjct: 1113 acccacttgcgcacctcgtcgtcgtacacccgagcacgcag 1073
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>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco
           activase (rba1 gene)
          Length = 321

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                       
Query: 237 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 296
           ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 210 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 151

                                  
Query: 297 ttctctatggtcatcttgggctg 319
           ||||| |  |||||||| |||||
Sbjct: 150 ttctcgactgtcatctttggctg 128



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                    
Query: 390 acccacttgcgcacctcgtcgtcgtacacccgtgcccgcag 430
           |||||||||||||||||||||||||||||||| || |||||
Sbjct: 57  acccacttgcgcacctcgtcgtcgtacacccgagcacgcag 17
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>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                        
Query: 248  cttgacgttctcctgctcctggaccagcatgtggccgtactccatgagcttctctatggt 307
            |||||||||||||||||||||||| ||||||   |||||  | | |||||| || || ||
Sbjct: 1293 cttgacgttctcctgctcctggacaagcatgcctccgtagccaaggagcttatcaattgt 1234

                        
Query: 308  catcttgggctg 319
            ||||||||||||
Sbjct: 1233 catcttgggctg 1222
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>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds
          Length = 4500

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 231  tcggcgagctgcacacgcttgacgttctcctgctc 265
            ||||| |||||||| ||||||||||||||||||||
Sbjct: 3239 tcggccagctgcacgcgcttgacgttctcctgctc 3205
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>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase
            activase mRNA, complete cds
          Length = 1693

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 231  tcggcgagctgcacacgcttgacgttctcctgctc 265
            ||||| |||||||| ||||||||||||||||||||
Sbjct: 1207 tcggccagctgcacgcgcttgacgttctcctgctc 1173
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>gb|DQ123944.1| Coffea arabica x Coffea canephora clone HT-SSH2-H08 mRNA sequence
          Length = 488

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 252 acgttctcctgctcctggaccagcatgtggccgtac 287
           |||||||||||||| ||||| ||||||| |||||||
Sbjct: 36  acgttctcctgctcttggacgagcatgttgccgtac 1
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>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 234  gcgagctgcacacgcttgacgttctcctgctc 265
            ||||||||||| |||||||| |||||||||||
Sbjct: 2136 gcgagctgcacgcgcttgacattctcctgctc 2105
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>gb|AC140331.2| Mus musculus BAC clone RP23-406J20 from chromosome 13, complete sequence
          Length = 192473

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 247    gcttgacgttctcctgctcctggaccagc 275
              ||||||| |||||||| ||||||||||||
Sbjct: 170620 gcttgacattctcctgttcctggaccagc 170592
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>ref|XM_974982.1| PREDICTED: Mus musculus desmoplakin (Dsp), mRNA
          Length = 8280

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 247  gcttgacgttctcctgctcctggaccagc 275
            ||||||| |||||||| ||||||||||||
Sbjct: 4777 gcttgacattctcctgttcctggaccagc 4749
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>ref|XM_912083.2| PREDICTED: Mus musculus desmoplakin, transcript variant 3 (Dsp), mRNA
          Length = 8583

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 247  gcttgacgttctcctgctcctggaccagc 275
            ||||||| |||||||| ||||||||||||
Sbjct: 4996 gcttgacattctcctgttcctggaccagc 4968
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>ref|XM_621314.3| PREDICTED: Mus musculus desmoplakin, transcript variant 1 (Dsp), mRNA
          Length = 9592

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 247  gcttgacgttctcctgctcctggaccagc 275
            ||||||| |||||||| ||||||||||||
Sbjct: 5360 gcttgacattctcctgttcctggaccagc 5332
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>gb|AC124549.5| Mus musculus BAC clone RP23-284E24 from 13, complete sequence
          Length = 199240

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 247   gcttgacgttctcctgctcctggaccagc 275
             ||||||| |||||||| ||||||||||||
Sbjct: 40085 gcttgacattctcctgttcctggaccagc 40057
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>dbj|AK009006.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
           library, clone:2300002E22 product:desmoplakin, full
           insert sequence
          Length = 1423

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 247 gcttgacgttctcctgctcctggaccagc 275
           ||||||| |||||||| ||||||||||||
Sbjct: 803 gcttgacattctcctgttcctggaccagc 775
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>gb|BC033467.1| Mus musculus desmoplakin, mRNA (cDNA clone IMAGE:4949004)
          Length = 2915

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 247  gcttgacgttctcctgctcctggaccagc 275
            ||||||| |||||||| ||||||||||||
Sbjct: 2607 gcttgacattctcctgttcctggaccagc 2579
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>gb|AC155204.4| Colobus guereza clone CH272-163G5, complete sequence
          Length = 26789

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    tatacaattcctttctcttt 29
             ||||||||||||||||||||
Sbjct: 16416 tatacaattcctttctcttt 16435
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>gb|BC033474.1| Homo sapiens renin, mRNA (cDNA clone MGC:34221 IMAGE:5188566),
           complete cds
          Length = 1475

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 287 ctccatgagcttctctatgg 306
           ||||||||||||||||||||
Sbjct: 956 ctccatgagcttctctatgg 937
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>gb|AY664490.1| Macaca fascicularis renin (REN) mRNA, complete cds
          Length = 1280

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 287 ctccatgagcttctctatgg 306
           ||||||||||||||||||||
Sbjct: 989 ctccatgagcttctctatgg 970
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>gb|BC047752.1| Homo sapiens renin, mRNA (cDNA clone MGC:54147 IMAGE:5590211),
           complete cds
          Length = 1471

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 287 ctccatgagcttctctatgg 306
           ||||||||||||||||||||
Sbjct: 959 ctccatgagcttctctatgg 940
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>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence
          Length = 1519

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 74/92 (80%)
 Strand = Plus / Minus

                                                                        
Query: 222  aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 281
            ||||||||||| || | ||| || | ||| || ||||| ||||| || || ||||||| |
Sbjct: 1332 aggtacttgtcagctaactgaactctcttaacattctcttgctcttgaacaagcatgttg 1273

                                            
Query: 282  ccgtactccatgagcttctctatggtcatctt 313
            |||||||| | |||||| || || ||||||||
Sbjct: 1272 ccgtactcgaggagcttatcgatagtcatctt 1241
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>gb|AC091381.3| Papio anubis clone RP41-468N20, complete sequence
          Length = 156353

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     tatacaattcctttctcttt 29
              ||||||||||||||||||||
Sbjct: 124708 tatacaattcctttctcttt 124727
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>gb|AC124814.10| Mus musculus chromosome 1, clone RP24-119P5, complete sequence
          Length = 162020

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 111    catatatatagtgcatgcatgcat 134
              ||||| ||||||||||||||||||
Sbjct: 122744 catatgtatagtgcatgcatgcat 122721
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>ref|NM_001032916.1| Macaca mulatta prorenin (REN), mRNA
          Length = 1461

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 287 ctccatgagcttctctatgg 306
           ||||||||||||||||||||
Sbjct: 974 ctccatgagcttctctatgg 955
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>ref|XM_743857.1| Aspergillus fumigatus Af293 hypothetical protein (Afu7g05590)
           partial mRNA
          Length = 720

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 282 ccgtactccatgagcttctc 301
           ||||||||||||||||||||
Sbjct: 212 ccgtactccatgagcttctc 193
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>gb|L00071.1|HUMREN08 Human renin gene, exon 8
          Length = 172

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 287 ctccatgagcttctctatgg 306
           ||||||||||||||||||||
Sbjct: 124 ctccatgagcttctctatgg 105
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>gb|AC093889.2| Homo sapiens BAC clone RP11-671G14 from 7, complete sequence
          Length = 198453

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   catatatatagtgcatgcat 130
             ||||||||||||||||||||
Sbjct: 31511 catatatatagtgcatgcat 31492
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>ref|NM_000537.2| Homo sapiens renin (REN), mRNA
          Length = 1461

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 287 ctccatgagcttctctatgg 306
           ||||||||||||||||||||
Sbjct: 974 ctccatgagcttctctatgg 955
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>emb|AL592146.8| Human DNA sequence from clone RP11-74C13 on chromosome 1 Contains the
             SOX13 gene for SOX13   SRY (sex determining region Y)-box
             13, two novel genes, a novel gene (FLJ10761), the 3' end
             of the REN gene for renin and two CpG islands, complete
             sequence
          Length = 101862

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   ctccatgagcttctctatgg 306
             ||||||||||||||||||||
Sbjct: 95051 ctccatgagcttctctatgg 95070
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 418     cccgtgcccgcagcgcgccg 437
               ||||||||||||||||||||
Sbjct: 2456174 cccgtgcccgcagcgcgccg 2456155
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>emb|CR933822.8| Zebrafish DNA sequence from clone DKEY-30F7 in linkage group 19,
             complete sequence
          Length = 187377

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   tatatagtgcatgcatgcat 134
             ||||||||||||||||||||
Sbjct: 65570 tatatagtgcatgcatgcat 65551
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>emb|X00063.1|HSRENK Human kidney mRNA fragment for renin (aa 105-401)
          Length = 1096

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 287 ctccatgagcttctctatgg 306
           ||||||||||||||||||||
Sbjct: 609 ctccatgagcttctctatgg 590
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>emb|CR926484.1| Pongo pygmaeus mRNA; cDNA DKFZp469I191 (from clone DKFZp469I191)
          Length = 1474

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 287 ctccatgagcttctctatgg 306
           ||||||||||||||||||||
Sbjct: 974 ctccatgagcttctctatgg 955
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>emb|CR536498.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0620D for
           gene REN, renin; complete cds, incl. stopcodon
          Length = 1221

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 287 ctccatgagcttctctatgg 306
           ||||||||||||||||||||
Sbjct: 930 ctccatgagcttctctatgg 911
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>gb|AY436324.1| Homo sapiens renin (REN) gene, complete cds
          Length = 14148

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   ctccatgagcttctctatgg 306
             ||||||||||||||||||||
Sbjct: 11638 ctccatgagcttctctatgg 11619
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>emb|AJ132342.1|CJA132342 Callithrix jacchus mRNA for preprorenin
          Length = 1203

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 287 ctccatgagcttctctatgg 306
           ||||||||||||||||||||
Sbjct: 912 ctccatgagcttctctatgg 893
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>emb|AL589679.14| Mouse DNA sequence from clone RP23-189A16 on chromosome 13 Contains the
              3' end of the Csh1 gene for chorionic somatomammotropin
              hormone 1,  two genes for novel proteins similar to
              chorionic somatomammotropin hormone 1 (Csh1), the Prlpi
              gene for prolactin-like protein I (Prlpj, decidualin), the
              Csh2 gene for chorionic somatomammotropin hormone 2, the
              gene for protein 1600016E11RIK similar to prolactin and a
              novel gene (4930511O05Rik), complete sequence
          Length = 207737

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 100    aaatagtccaacatatatatagtg 123
              ||||||||||| ||||||||||||
Sbjct: 162426 aaatagtccaaaatatatatagtg 162403
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>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase
           (pJQ11)
          Length = 883

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 282 ccgtactccatgagcttctctatggtcatctt 313
           |||||||| | ||||||||| |||||||||||
Sbjct: 495 ccgtactcgaggagcttctcaatggtcatctt 464
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>gb|M10151.1|HUMRENA4 Homo sapiens renin (REN) gene, exons 6, 7, 8, and 9
          Length = 3057

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  ctccatgagcttctctatgg 306
            ||||||||||||||||||||
Sbjct: 2172 ctccatgagcttctctatgg 2153
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>gb|DP000005.1| Macaca mulatta target 1 genomic scaffold
          Length = 1678549

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 10      tatacaattcctttctcttt 29
               ||||||||||||||||||||
Sbjct: 1390491 tatacaattcctttctcttt 1390510
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>gb|AC024259.17| Homo sapiens chromosome 7 clone RP11-105B19, complete sequence
          Length = 177303

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   catatatatagtgcatgcat 130
             ||||||||||||||||||||
Sbjct: 68633 catatatatagtgcatgcat 68652
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 374     cacgccgatctcgccgaccc 393
               ||||||||||||||||||||
Sbjct: 2558497 cacgccgatctcgccgaccc 2558516
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>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
              sequence
          Length = 4332241

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     caattcctttctctttcaag 33
              ||||||||||||||||||||
Sbjct: 731324 caattcctttctctttcaag 731305
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>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold
          Length = 1825024

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 10      tatacaattcctttctcttt 29
               ||||||||||||||||||||
Sbjct: 1413307 tatacaattcctttctcttt 1413326
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>gb|AC123966.4| Macaca mulatta clone CH250-72H9, complete sequence
          Length = 114602

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    tatacaattcctttctcttt 29
             ||||||||||||||||||||
Sbjct: 65207 tatacaattcctttctcttt 65226
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>gb|AC154224.1| Mus musculus BAC clone RP24-141J15 from chromosome 13, complete
           sequence
          Length = 146998

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 109 aacatatatatagtgcatgc 128
           ||||||||||||||||||||
Sbjct: 109 aacatatatatagtgcatgc 90
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>gb|AF193454.1|F193446S09 Pan troglodytes renin (REN) gene, exon 8
          Length = 142

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 287 ctccatgagcttctctatgg 306
           ||||||||||||||||||||
Sbjct: 112 ctccatgagcttctctatgg 93
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>gb|AC098590.3| Homo sapiens BAC clone RP11-324J13 from 4, complete sequence
          Length = 157544

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 110    acatatatatagtgcatgcatgca 133
              ||||||||||||| ||||||||||
Sbjct: 121059 acatatatatagtacatgcatgca 121036
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>ref|NM_001009122.1| Pan troglodytes renin (REN), mRNA
          Length = 1221

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 287 ctccatgagcttctctatgg 306
           ||||||||||||||||||||
Sbjct: 930 ctccatgagcttctctatgg 911
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>gb|AC079378.2| Rattus norvegicus strain Brown Norway chromosome 4 clone RP31-7L11,
             complete sequence
          Length = 189137

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    aattcctttctctttcaaga 34
             ||||||||||||||||||||
Sbjct: 76252 aattcctttctctttcaaga 76233
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>gb|AY662332.2| Macaca mulatta prorenin (REN) mRNA, complete cds
          Length = 1461

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 287 ctccatgagcttctctatgg 306
           ||||||||||||||||||||
Sbjct: 974 ctccatgagcttctctatgg 955
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>emb|BX936423.12| Zebrafish DNA sequence from clone DKEY-174M14 in linkage group 20,
             complete sequence
          Length = 170767

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 292   tgagcttctctatggtcatcttgg 315
             |||||||||| |||||||||||||
Sbjct: 59941 tgagcttctcaatggtcatcttgg 59964
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>gb|AC154184.1| Mus musculus BAC clone RP24-67K24 from 13, complete sequence
          Length = 151468

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   aacatatatatagtgcatgc 128
             ||||||||||||||||||||
Sbjct: 19290 aacatatatatagtgcatgc 19309
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>gb|AC138437.3| Cercopithecus aethiops clone CH252-390I5, complete sequence
          Length = 182169

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     tatacaattcctttctcttt 29
              ||||||||||||||||||||
Sbjct: 109408 tatacaattcctttctcttt 109427
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>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete cds
          Length = 1674

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 282  ccgtactccatgagcttctctatggtcatctt 313
            |||||||| | ||||||||| |||||||||||
Sbjct: 1255 ccgtactcgaggagcttctcaatggtcatctt 1224
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>emb|AL805929.7| Mouse DNA sequence from clone RP23-252O5 on chromosome X, complete
             sequence
          Length = 175802

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   tgcatgcatgcatcttaagt 141
             ||||||||||||||||||||
Sbjct: 22325 tgcatgcatgcatcttaagt 22306


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,663,354
Number of Sequences: 3902068
Number of extensions: 3663354
Number of successful extensions: 73284
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72850
Number of HSP's gapped (non-prelim): 411
length of query: 438
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 416
effective length of database: 17,147,199,772
effective search space: 7133235105152
effective search space used: 7133235105152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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