Clone Name | rbah63h15 |
---|---|
Clone Library Name | barley_pub |
>gb|AF475105.1| Triticum aestivum apomixis-associated protein mRNA, partial cds Length = 435 Score = 359 bits (181), Expect = 6e-96 Identities = 208/216 (96%), Gaps = 1/216 (0%) Strand = Plus / Minus Query: 298 tcataggaacacgtcctgctccagcagcttgaccacctcgtcctggctgttgagcttggc 357 ||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||| Sbjct: 435 tcataggaacacgtcctgctcaagcagcttcaccacctcgccctggctgttgagcttggc 376 Query: 358 cacctcgatgggggtcttcccgtccagattttggagcgtgacagcagcgccgtgcttcaa 417 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 375 cacctcgatgggggtcttcccatccagattttggagcgtgacagcagcgccgtgcttcaa 316 Query: 418 aagaagatccacgcattccttcctaccgtatccagcggcatagtgcagcgggggtgttct 477 |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 315 gagaagatccacgcattccttccgaccgtatccagcggcatagtgcagc-ggggtgttct 257 Query: 478 tgttcttatccagtgcgtnaactgcagcgcctgcct 513 |||||||||||||||||| ||||||||||||||||| Sbjct: 256 tgttcttatccagtgcgtcaactgcagcgcctgcct 221
>gb|AF358770.1| Oryza sativa clone Osl81 apospory-associated protein mRNA, partial cds Length = 710 Score = 188 bits (95), Expect = 1e-44 Identities = 161/182 (88%), Gaps = 1/182 (0%) Strand = Plus / Minus Query: 332 acctcgtcctggctgttgagcttggccacctcgatgggggtcttcccgtccagattttgg 391 ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 614 acctcatcctggttgttcagcttggccacctcgatgggggtcttcccgtccagattctgg 555 Query: 392 agcgtgacagcagcgccgtgcttcaaaagaagatccacgcattccttcctaccgtatcca 451 |||||||||||||||| ||||||| ||||||||||| ||||| |||| ||| |||||| Sbjct: 554 ggcgtgacagcagcgccatgcttcagcagaagatccacacattctttccgaccatatcca 495 Query: 452 gcggcatagtgcagcgggggtgttcttgttcttatccagtgcgtnaactgcagcgcctgc 511 || || || ||||| |||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 494 gcagcgtaatgcag-tggggtgttcttgttcttatccagtgcgtttacagcagcacctgc 436 Query: 512 ct 513 || Sbjct: 435 ct 434
>dbj|AK121370.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125M12, full insert sequence Length = 1529 Score = 188 bits (95), Expect = 1e-44 Identities = 161/182 (88%), Gaps = 1/182 (0%) Strand = Plus / Minus Query: 332 acctcgtcctggctgttgagcttggccacctcgatgggggtcttcccgtccagattttgg 391 ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1190 acctcatcctggttgttcagcttggccacctcgatgggggtcttcccgtccagattctgg 1131 Query: 392 agcgtgacagcagcgccgtgcttcaaaagaagatccacgcattccttcctaccgtatcca 451 |||||||||||||||| ||||||| ||||||||||| ||||| |||| ||| |||||| Sbjct: 1130 ggcgtgacagcagcgccatgcttcagcagaagatccacacattctttccgaccatatcca 1071 Query: 452 gcggcatagtgcagcgggggtgttcttgttcttatccagtgcgtnaactgcagcgcctgc 511 || || || ||||| |||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 1070 gcagcgtaatgcag-tggggtgttcttgttcttatccagtgcgtttacagcagcacctgc 1012 Query: 512 ct 513 || Sbjct: 1011 ct 1010
>dbj|AK098858.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M21, full insert sequence Length = 1475 Score = 188 bits (95), Expect = 1e-44 Identities = 161/182 (88%), Gaps = 1/182 (0%) Strand = Plus / Minus Query: 332 acctcgtcctggctgttgagcttggccacctcgatgggggtcttcccgtccagattttgg 391 ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1190 acctcatcctggttgttcagcttggccacctcgatgggggtcttcccgtccagattctgg 1131 Query: 392 agcgtgacagcagcgccgtgcttcaaaagaagatccacgcattccttcctaccgtatcca 451 |||||||||||||||| ||||||| ||||||||||| ||||| |||| ||| |||||| Sbjct: 1130 ggcgtgacagcagcgccatgcttcagcagaagatccacacattctttccgaccatatcca 1071 Query: 452 gcggcatagtgcagcgggggtgttcttgttcttatccagtgcgtnaactgcagcgcctgc 511 || || || ||||| |||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 1070 gcagcgtaatgcag-tggggtgttcttgttcttatccagtgcgtttacagcagcacctgc 1012 Query: 512 ct 513 || Sbjct: 1011 ct 1010
>dbj|AK062078.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-F07, full insert sequence Length = 1418 Score = 188 bits (95), Expect = 1e-44 Identities = 161/182 (88%), Gaps = 1/182 (0%) Strand = Plus / Minus Query: 332 acctcgtcctggctgttgagcttggccacctcgatgggggtcttcccgtccagattttgg 391 ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1195 acctcatcctggttgttcagcttggccacctcgatgggggtcttcccgtccagattctgg 1136 Query: 392 agcgtgacagcagcgccgtgcttcaaaagaagatccacgcattccttcctaccgtatcca 451 |||||||||||||||| ||||||| ||||||||||| ||||| |||| ||| |||||| Sbjct: 1135 ggcgtgacagcagcgccatgcttcagcagaagatccacacattctttccgaccatatcca 1076 Query: 452 gcggcatagtgcagcgggggtgttcttgttcttatccagtgcgtnaactgcagcgcctgc 511 || || || ||||| |||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 1075 gcagcgtaatgcag-tggggtgttcttgttcttatccagtgcgtttacagcagcacctgc 1017 Query: 512 ct 513 || Sbjct: 1016 ct 1015
>gb|AY106235.1| Zea mays PCO066039 mRNA sequence Length = 1360 Score = 159 bits (80), Expect = 1e-35 Identities = 162/188 (86%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 300 ataggaacacgtcctgctccagcagcttgaccacctcgtcctggctgttgagcttggcca 359 ||||||| |||||| ||| |||| ||||| ||||| || || |||||||| ||||| | Sbjct: 1096 ataggaaagcgtccttctctagcaacttgagaacctcatcttgactgttgagtttggcaa 1037 Query: 360 cctcgatgggggtcttcccgtccagattttggagcgtgacagcagcgccgtgcttcaaaa 419 ||||||||||||| |||||||||||||| ||||||||||||||||| || | |||||| | Sbjct: 1036 cctcgatgggggttttcccgtccagattctggagcgtgacagcagcaccatacttcaaca 977 Query: 420 gaagatccacgcattccttcctaccgtatccagcggcatagtgcagcgggggtgttcttg 479 |||||||||| |||||||||| ||| || ||||| |||||||||| | || ||||||||| Sbjct: 976 gaagatccacacattccttccgaccatacccagcagcatagtgcaac-ggagtgttcttg 918 Query: 480 ttcttatc 487 |||||||| Sbjct: 917 ttcttatc 910
>dbj|D37939.1|PENPSB31AB Pennisetum ciliare apomixis-associated mRNA, clone:psb3-1a Length = 876 Score = 157 bits (79), Expect = 4e-35 Identities = 175/206 (84%), Gaps = 1/206 (0%) Strand = Plus / Minus Query: 300 ataggaacacgtcctgctccagcagcttgaccacctcgtcctggctgttgagcttggcca 359 ||||||| |||||| |||||||| ||||| ||||| ||||| |||||||| |||| | Sbjct: 631 ataggaaggcgtccttctccagcaacttgagaacctcatcctgattgttgagcctggcaa 572 Query: 360 cctcgatgggggtcttcccgtccagattttggagcgtgacagcagcgccgtgcttcaaaa 419 | ||||||||||||||||| |||||||| |||| |||||||||||| || ||||| || | Sbjct: 571 cttcgatgggggtcttcccatccagattctggaccgtgacagcagcaccatgctttaaca 512 Query: 420 gaagatccacgcattccttcctaccgtatccagcggcatagtgcagcgggggtgttcttg 479 |||||||||| |||||||||| || || ||||| ||||| |||||| || ||||| ||| Sbjct: 511 gaagatccacacattccttccggccatacccagcagcataatgcagc-ggagtgtttttg 453 Query: 480 ttcttatccagtgcgtnaactgcagc 505 ||||||||||| |||| ||||||||| Sbjct: 452 ttcttatccagagcgtcaactgcagc 427
>gb|U13149.1|PCU13149 Pennisetum ciliare possible apospory-associated mRNA clone pSUB 3-1a, partial cds Length = 876 Score = 157 bits (79), Expect = 4e-35 Identities = 175/206 (84%), Gaps = 1/206 (0%) Strand = Plus / Minus Query: 300 ataggaacacgtcctgctccagcagcttgaccacctcgtcctggctgttgagcttggcca 359 ||||||| |||||| |||||||| ||||| ||||| ||||| |||||||| |||| | Sbjct: 631 ataggaaggcgtccttctccagcaacttgagaacctcatcctgattgttgagcctggcaa 572 Query: 360 cctcgatgggggtcttcccgtccagattttggagcgtgacagcagcgccgtgcttcaaaa 419 | ||||||||||||||||| |||||||| |||| |||||||||||| || ||||| || | Sbjct: 571 cttcgatgggggtcttcccatccagattctggaccgtgacagcagcaccatgctttaaca 512 Query: 420 gaagatccacgcattccttcctaccgtatccagcggcatagtgcagcgggggtgttcttg 479 |||||||||| |||||||||| || || ||||| ||||| |||||| || ||||| ||| Sbjct: 511 gaagatccacacattccttccggccatacccagcagcataatgcagc-ggagtgtttttg 453 Query: 480 ttcttatccagtgcgtnaactgcagc 505 ||||||||||| |||| ||||||||| Sbjct: 452 ttcttatccagagcgtcaactgcagc 427
>emb|Z36546.1|PCAPOSPA3 P.ciliare (Higgins) apospory associated mRNA, 876bp Length = 876 Score = 157 bits (79), Expect = 4e-35 Identities = 175/206 (84%), Gaps = 1/206 (0%) Strand = Plus / Minus Query: 300 ataggaacacgtcctgctccagcagcttgaccacctcgtcctggctgttgagcttggcca 359 ||||||| |||||| |||||||| ||||| ||||| ||||| |||||||| |||| | Sbjct: 631 ataggaaggcgtccttctccagcaacttgagaacctcatcctgattgttgagcctggcaa 572 Query: 360 cctcgatgggggtcttcccgtccagattttggagcgtgacagcagcgccgtgcttcaaaa 419 | ||||||||||||||||| |||||||| |||| |||||||||||| || ||||| || | Sbjct: 571 cttcgatgggggtcttcccatccagattctggaccgtgacagcagcaccatgctttaaca 512 Query: 420 gaagatccacgcattccttcctaccgtatccagcggcatagtgcagcgggggtgttcttg 479 |||||||||| |||||||||| || || ||||| ||||| |||||| || ||||| ||| Sbjct: 511 gaagatccacacattccttccggccatacccagcagcataatgcagc-ggagtgtttttg 453 Query: 480 ttcttatccagtgcgtnaactgcagc 505 ||||||||||| |||| ||||||||| Sbjct: 452 ttcttatccagagcgtcaactgcagc 427
>gb|AY107283.1| Zea mays PCO076711 mRNA sequence Length = 1604 Score = 133 bits (67), Expect = 6e-28 Identities = 148/174 (85%), Gaps = 1/174 (0%) Strand = Plus / Minus Query: 332 acctcgtcctggctgttgagcttggccacctcgatgggggtcttcccgtccagattttgg 391 |||||||||||| | || |||||||| || ||||| || |||||||||||||| |||||| Sbjct: 1256 acctcgtcctggttattcagcttggcgacatcgataggtgtcttcccgtccaggttttgg 1197 Query: 392 agcgtgacagcagcgccgtgcttcaaaagaagatccacgcattccttcctaccgtatcca 451 ||||| |||||||| ||||||||||||||||||||||| || ||||| | ||||| ||| Sbjct: 1196 agcgttacagcagcaccgtgcttcaaaagaagatccacacactccttgcggccgtagcca 1137 Query: 452 gcggcatagtgcagcgggggtgttcttgttcttatccagtgcgtnaactgcagc 505 || || || |||| | ||||||||||||||||| || || |||| |||||||| Sbjct: 1136 gcagcgtaatgcaac-ggggtgttcttgttcttgtcaagagcgtccactgcagc 1084
>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0065A15, complete sequence Length = 168806 Score = 97.6 bits (49), Expect = 3e-17 Identities = 100/116 (86%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 398 acagcagcgccgtgcttcaaaagaagatccacgcattccttcctaccgtatccagcggca 457 ||||||||||| ||||||| ||||||||||| ||||| |||| ||| |||||||| || Sbjct: 151736 acagcagcgccatgcttcagcagaagatccacacattctttccgaccatatccagcagcg 151677 Query: 458 tagtgcagcgggggtgttcttgttcttatccagtgcgtnaactgcagcgcctgcct 513 || ||||| |||| |||||||||||||||||||||||| || ||||| ||||||| Sbjct: 151676 taatgcagtgggg-tgttcttgttcttatccagtgcgtttacagcagcacctgcct 151622 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Minus Query: 332 acctcgtcctggctgttgagcttggccacctcgatgggggtcttcccgtccagattttgg 391 ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 151892 acctcatcctggttgttcagcttggccacctcgatgggggtcttcccgtccagattctgg 151833 Query: 392 agcgtg 397 ||||| Sbjct: 151832 ggcgtg 151827
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 97.6 bits (49), Expect = 3e-17 Identities = 100/116 (86%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 398 acagcagcgccgtgcttcaaaagaagatccacgcattccttcctaccgtatccagcggca 457 ||||||||||| ||||||| ||||||||||| ||||| |||| ||| |||||||| || Sbjct: 19668661 acagcagcgccatgcttcagcagaagatccacacattctttccgaccatatccagcagcg 19668602 Query: 458 tagtgcagcgggggtgttcttgttcttatccagtgcgtnaactgcagcgcctgcct 513 || ||||| |||| |||||||||||||||||||||||| || ||||| ||||||| Sbjct: 19668601 taatgcagtgggg-tgttcttgttcttatccagtgcgtttacagcagcacctgcct 19668547 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Minus Query: 332 acctcgtcctggctgttgagcttggccacctcgatgggggtcttcccgtccagattttgg 391 ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 19668817 acctcatcctggttgttcagcttggccacctcgatgggggtcttcccgtccagattctgg 19668758 Query: 392 agcgtg 397 ||||| Sbjct: 19668757 ggcgtg 19668752
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450E05 Length = 176553 Score = 97.6 bits (49), Expect = 3e-17 Identities = 100/116 (86%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 398 acagcagcgccgtgcttcaaaagaagatccacgcattccttcctaccgtatccagcggca 457 ||||||||||| ||||||| ||||||||||| ||||| |||| ||| |||||||| || Sbjct: 14347 acagcagcgccatgcttcagcagaagatccacacattctttccgaccatatccagcagcg 14288 Query: 458 tagtgcagcgggggtgttcttgttcttatccagtgcgtnaactgcagcgcctgcct 513 || ||||| |||| |||||||||||||||||||||||| || ||||| ||||||| Sbjct: 14287 taatgcagtgggg-tgttcttgttcttatccagtgcgtttacagcagcacctgcct 14233 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Minus Query: 332 acctcgtcctggctgttgagcttggccacctcgatgggggtcttcccgtccagattttgg 391 ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 14503 acctcatcctggttgttcagcttggccacctcgatgggggtcttcccgtccagattctgg 14444 Query: 392 agcgtg 397 ||||| Sbjct: 14443 ggcgtg 14438
>ref|XM_483562.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1306 Score = 83.8 bits (42), Expect = 5e-13 Identities = 130/158 (82%), Gaps = 1/158 (0%) Strand = Plus / Minus Query: 332 acctcgtcctggctgttgagcttggccacctcgatgggggtcttcccgtccagattttgg 391 |||||||||||| |||||||||| || || || |||| ||||| || |||| |||| | Sbjct: 1015 acctcgtcctggttgttgagcttcgcaacgtcaatggccgtcttgccatccatgttttcg 956 Query: 392 agcgtgacagcagcgccgtgcttcaaaagaagatccacgcattccttcctaccgtatcca 451 || |||||||| || |||| ||||| |||||||||||||| ||||| |||| || ||| Sbjct: 955 agggtgacagcggctccgttcttcagcagaagatccacgcaccccttcataccatagcca 896 Query: 452 gcggcatagtgcagcgggggtgttcttgttcttatcca 489 ||||| || |||||| || |||||||||||||| |||| Sbjct: 895 gcggcgtaatgcagc-ggagtgttcttgttcttgtcca 859
>dbj|AK108758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-G03, full insert sequence Length = 1292 Score = 83.8 bits (42), Expect = 5e-13 Identities = 130/158 (82%), Gaps = 1/158 (0%) Strand = Plus / Minus Query: 332 acctcgtcctggctgttgagcttggccacctcgatgggggtcttcccgtccagattttgg 391 |||||||||||| |||||||||| || || || |||| ||||| || |||| |||| | Sbjct: 1001 acctcgtcctggttgttgagcttcgcaacgtcaatggccgtcttgccatccatgttttcg 942 Query: 392 agcgtgacagcagcgccgtgcttcaaaagaagatccacgcattccttcctaccgtatcca 451 || |||||||| || |||| ||||| |||||||||||||| ||||| |||| || ||| Sbjct: 941 agggtgacagcggctccgttcttcagcagaagatccacgcaccccttcataccatagcca 882 Query: 452 gcggcatagtgcagcgggggtgttcttgttcttatcca 489 ||||| || |||||| || |||||||||||||| |||| Sbjct: 881 gcggcgtaatgcagc-ggagtgttcttgttcttgtcca 845
>gb|AY107770.1| Zea mays PCO087426 mRNA sequence Length = 1494 Score = 83.8 bits (42), Expect = 5e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 316 ctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggggtctt 375 |||||||||||||| || || |||||| |||||||||||||||| |||||||| ||||| Sbjct: 1136 ctccagcagcttgaggacgtcatcctggttgttgagcttggccacgtcgatgggcgtctt 1077 Query: 376 cccgtccagattttggagcgtgacagcagcgccg 409 ||||||||| || || ||||| || || |||||| Sbjct: 1076 cccgtccaggttctgcagcgtcacggcggcgccg 1043
>emb|AJ234569.1|HVU234569 Hordeum vulgare genomic DNA fragment; clone MWG0813.rev Length = 107 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 316 ctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggggtctt 375 |||||||||||||| |||||| ||||||||||||||| | ||||| ||||||| ||||| Sbjct: 72 ctccagcagcttgagcacctcctcctggctgttgagcctcgccacgtcgatggccgtctt 13 Query: 376 cccgtccag 384 ||||||||| Sbjct: 12 cccgtccag 4
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 56.0 bits (28), Expect = 1e-04 Identities = 77/92 (83%), Gaps = 1/92 (1%) Strand = Plus / Minus Query: 398 acagcagcgccgtgcttcaaaagaagatccacgcattccttcctaccgtatccagcggca 457 ||||| || |||| ||||| |||||||||||||| ||||| |||| || |||||||| Sbjct: 26979004 acagcggctccgttcttcagcagaagatccacgcaccccttcataccatagccagcggcg 26978945 Query: 458 tagtgcagcgggggtgttcttgttcttatcca 489 || |||||| || |||||||||||||| |||| Sbjct: 26978944 taatgcagc-ggagtgttcttgttcttgtcca 26978914
>dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0666G10 Length = 150761 Score = 56.0 bits (28), Expect = 1e-04 Identities = 77/92 (83%), Gaps = 1/92 (1%) Strand = Plus / Minus Query: 398 acagcagcgccgtgcttcaaaagaagatccacgcattccttcctaccgtatccagcggca 457 ||||| || |||| ||||| |||||||||||||| ||||| |||| || |||||||| Sbjct: 80404 acagcggctccgttcttcagcagaagatccacgcaccccttcataccatagccagcggcg 80345 Query: 458 tagtgcagcgggggtgttcttgttcttatcca 489 || |||||| || |||||||||||||| |||| Sbjct: 80344 taatgcagc-ggagtgttcttgttcttgtcca 80314
>ref|XM_470424.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1369 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Minus Query: 320 agcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggggtcttcccg 379 |||||||||| || || |||||| ||||||| || ||||| ||||||| ||||||||| Sbjct: 1031 agcagcttgaggacttcctcctggttgttgagtttcgccacgtcgatggccgtcttcccg 972 Query: 380 tccag 384 ||||| Sbjct: 971 tccag 967
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Minus Query: 320 agcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggggtcttcccg 379 |||||||||| || || |||||| ||||||| || ||||| ||||||| ||||||||| Sbjct: 35559911 agcagcttgaggacttcctcctggttgttgagtttcgccacgtcgatggccgtcttcccg 35559852 Query: 380 tccag 384 ||||| Sbjct: 35559851 tccag 35559847
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Minus Query: 320 agcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggggtcttcccg 379 |||||||||| || || |||||| ||||||| || ||||| ||||||| ||||||||| Sbjct: 35649983 agcagcttgaggacttcctcctggttgttgagtttcgccacgtcgatggccgtcttcccg 35649924 Query: 380 tccag 384 ||||| Sbjct: 35649923 tccag 35649919
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete sequence Length = 145290 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Minus Query: 320 agcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggggtcttcccg 379 |||||||||| || || |||||| ||||||| || ||||| ||||||| ||||||||| Sbjct: 92874 agcagcttgaggacttcctcctggttgttgagtttcgccacgtcgatggccgtcttcccg 92815 Query: 380 tccag 384 ||||| Sbjct: 92814 tccag 92810
>dbj|AK068082.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130D01, full insert sequence Length = 1360 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Minus Query: 320 agcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggggtcttcccg 379 |||||||||| || || |||||| ||||||| || ||||| ||||||| ||||||||| Sbjct: 1070 agcagcttgaggacttcctcctggttgttgagtttcgccacgtcgatggccgtcttcccg 1011 Query: 380 tccag 384 ||||| Sbjct: 1010 tccag 1006
>ref|NM_179168.1| Arabidopsis thaliana AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2); protein binding AT4G35450 (AKR2) transcript variant AT4G35450.4 mRNA, complete cds Length = 1377 Score = 46.1 bits (23), Expect = 0.11 Identities = 77/95 (81%) Strand = Plus / Minus Query: 311 tcctgctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggg 370 |||| ||| |||||||| |||||||| ||||||||||||||| || || || || || Sbjct: 1046 tccttctcaagcagcttcaccacctccagctggctgttgagcttcgctacatcaattggc 987 Query: 371 gtcttcccgtccagattttggagcgtgacagcagc 405 |||||| |||| || ||||| || ||||| ||||| Sbjct: 986 gtcttctcgtctaggttttgcagagtgactgcagc 952
>ref|NM_179166.1| Arabidopsis thaliana AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2); protein binding AT4G35450 (AKR2) transcript variant AT4G35450.2 mRNA, complete cds Length = 1522 Score = 46.1 bits (23), Expect = 0.11 Identities = 77/95 (81%) Strand = Plus / Minus Query: 311 tcctgctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggg 370 |||| ||| |||||||| |||||||| ||||||||||||||| || || || || || Sbjct: 1191 tccttctcaagcagcttcaccacctccagctggctgttgagcttcgctacatcaattggc 1132 Query: 371 gtcttcccgtccagattttggagcgtgacagcagc 405 |||||| |||| || ||||| || ||||| ||||| Sbjct: 1131 gtcttctcgtctaggttttgcagagtgactgcagc 1097
>ref|NM_179167.1| Arabidopsis thaliana AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2); protein binding AT4G35450 (AKR2) transcript variant AT4G35450.3 mRNA, complete cds Length = 1442 Score = 46.1 bits (23), Expect = 0.11 Identities = 77/95 (81%) Strand = Plus / Minus Query: 311 tcctgctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggg 370 |||| ||| |||||||| |||||||| ||||||||||||||| || || || || || Sbjct: 1111 tccttctcaagcagcttcaccacctccagctggctgttgagcttcgctacatcaattggc 1052 Query: 371 gtcttcccgtccagattttggagcgtgacagcagc 405 |||||| |||| || ||||| || ||||| ||||| Sbjct: 1051 gtcttctcgtctaggttttgcagagtgactgcagc 1017
>ref|NM_119710.3| Arabidopsis thaliana AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2); protein binding AT4G35450 (AKR2) transcript variant AT4G35450.1 mRNA, complete cds Length = 1513 Score = 46.1 bits (23), Expect = 0.11 Identities = 77/95 (81%) Strand = Plus / Minus Query: 311 tcctgctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggg 370 |||| ||| |||||||| |||||||| ||||||||||||||| || || || || || Sbjct: 1182 tccttctcaagcagcttcaccacctccagctggctgttgagcttcgctacatcaattggc 1123 Query: 371 gtcttcccgtccagattttggagcgtgacagcagc 405 |||||| |||| || ||||| || ||||| ||||| Sbjct: 1122 gtcttctcgtctaggttttgcagagtgactgcagc 1088
>gb|AY081477.1| Arabidopsis thaliana ankyrin repeat-containing protein 2 (At4g35450) mRNA, complete cds Length = 1100 Score = 46.1 bits (23), Expect = 0.11 Identities = 77/95 (81%) Strand = Plus / Minus Query: 311 tcctgctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggg 370 |||| ||| |||||||| |||||||| ||||||||||||||| || || || || || Sbjct: 1016 tccttctcaagcagcttcaccacctccagctggctgttgagcttcgctacatcaattggc 957 Query: 371 gtcttcccgtccagattttggagcgtgacagcagc 405 |||||| |||| || ||||| || ||||| ||||| Sbjct: 956 gtcttctcgtctaggttttgcagagtgactgcagc 922
>gb|AF386982.1|AF386982 Arabidopsis thaliana ankyrin repeat-containing protein 2 (F15J1.20) mRNA, complete cds Length = 1389 Score = 46.1 bits (23), Expect = 0.11 Identities = 77/95 (81%) Strand = Plus / Minus Query: 311 tcctgctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggg 370 |||| ||| |||||||| |||||||| ||||||||||||||| || || || || || Sbjct: 1191 tccttctcaagcagcttcaccacctccagctggctgttgagcttcgctacatcaattggc 1132 Query: 371 gtcttcccgtccagattttggagcgtgacagcagc 405 |||||| |||| || ||||| || ||||| ||||| Sbjct: 1131 gtcttctcgtctaggttttgcagagtgactgcagc 1097
>emb|BX826711.1|CNS0A38X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB56ZH12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1333 Score = 46.1 bits (23), Expect = 0.11 Identities = 77/95 (81%) Strand = Plus / Minus Query: 311 tcctgctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggg 370 |||| ||| |||||||| |||||||| ||||||||||||||| || || || || || Sbjct: 1066 tccttctcaagcagcttcaccacctccagctggctgttgagcttcgctacatcaattggc 1007 Query: 371 gtcttcccgtccagattttggagcgtgacagcagc 405 |||||| |||| || ||||| || ||||| ||||| Sbjct: 1006 gtcttctcgtctaggttttgcagagtgactgcagc 972
>gb|AY087377.1| Arabidopsis thaliana clone 34698 mRNA, complete sequence Length = 1344 Score = 46.1 bits (23), Expect = 0.11 Identities = 77/95 (81%) Strand = Plus / Minus Query: 311 tcctgctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggg 370 |||| ||| |||||||| |||||||| ||||||||||||||| || || || || || Sbjct: 1146 tccttctcaagcagcttcaccacctccagctggctgttgagcttcgctacatcaattggc 1087 Query: 371 gtcttcccgtccagattttggagcgtgacagcagc 405 |||||| |||| || ||||| || ||||| ||||| Sbjct: 1086 gtcttctcgtctaggttttgcagagtgactgcagc 1052
>gb|U70425.1|ATU70425 Arabidopsis thaliana ankyrin repeat-containing protein 2 (AKR2) mRNA, complete cds Length = 1598 Score = 46.1 bits (23), Expect = 0.11 Identities = 77/95 (81%) Strand = Plus / Minus Query: 311 tcctgctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggg 370 |||| ||| |||||||| |||||||| ||||||||||||||| || || || || || Sbjct: 1272 tccttctcaagcagcttcaccacctccagctggctgttgagcttcgctacatcaattggc 1213 Query: 371 gtcttcccgtccagattttggagcgtgacagcagc 405 |||||| |||| || ||||| || ||||| ||||| Sbjct: 1212 gtcttctcgtctaggttttgcagagtgactgcagc 1178
>gb|AF034387.1|AF034387 Arabidopsis thaliana AFT protein (AFT) mRNA, complete cds Length = 1315 Score = 46.1 bits (23), Expect = 0.11 Identities = 77/95 (81%) Strand = Plus / Minus Query: 311 tcctgctccagcagcttgaccacctcgtcctggctgttgagcttggccacctcgatgggg 370 |||| ||| |||||||| |||||||| ||||||||||||||| || || || || || Sbjct: 1095 tccttctcaagcagcttcaccacctccagctggctgttgagcttcgctacatcaattggc 1036 Query: 371 gtcttcccgtccagattttggagcgtgacagcagc 405 |||||| |||| || ||||| || ||||| ||||| Sbjct: 1035 gtcttctcgtctaggttttgcagagtgactgcagc 1001
>emb|AL596104.24| Mouse DNA sequence from clone RP23-326P8 on chromosome 11, complete sequence Length = 164530 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 245 cagaaacaaggaagtgttttagg 267 ||||||||||||||||||||||| Sbjct: 145441 cagaaacaaggaagtgttttagg 145419
>gb|AC120873.7| Mus musculus chromosome 12, clone RP23-283P14, complete sequence Length = 198375 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 157 cacacaggtaacaggcgagagc 178 |||||||||||||||||||||| Sbjct: 196558 cacacaggtaacaggcgagagc 196579
>emb|CR974487.10| Mouse DNA sequence from clone RP23-136M7 on chromosome 12, complete sequence Length = 218303 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 157 cacacaggtaacaggcgagagc 178 |||||||||||||||||||||| Sbjct: 45718 cacacaggtaacaggcgagagc 45697
>dbj|D78001.1|RHMTREY Rhizobium sp. DNA for maltooligosyl trehalose trehalohydrolase, maltooligosyl trehalose synthase, complete cds Length = 4834 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 318 ccagcagcttgaccacctcgtcctgg 343 |||||||||||||| ||||||||||| Sbjct: 2563 ccagcagcttgaccgcctcgtcctgg 2538
>gb|AC162181.2| Mus musculus BAC clone RP23-49J15 from chromosome 12, complete sequence Length = 215236 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 ccacagcaaatagctcccccg 70 ||||||||||||||||||||| Sbjct: 12303 ccacagcaaatagctcccccg 12323
>gb|AC183297.3| Pan troglodytes BAC clone CH251-300E12 from chromosome 18, complete sequence Length = 173095 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gaacagggttgcacagcagga 109 ||||||||||||||||||||| Sbjct: 140175 gaacagggttgcacagcagga 140155
>gb|AC163887.2| Glomus intraradices clone JGIATSX-5E19, complete sequence Length = 35580 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 tgttgagcttggccacctcga 365 ||||||||||||||||||||| Sbjct: 26108 tgttgagcttggccacctcga 26088
>gb|AF352797.1|AF352797 Nicotiana tabacum ankyrin-repeat protein HBP1 mRNA, complete cds Length = 1331 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 434 tccttcctaccgtatccagcggcatagtg 462 ||||||||||| |||||||| |||||||| Sbjct: 1006 tccttcctaccatatccagcagcatagtg 978
>gb|AF510035.1| Nicotiana tabacum ankyrin domain protein (ANK1) mRNA, complete cds Length = 1053 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 434 tccttcctaccgtatccagcggcatagtg 462 ||||||||||| |||||||| |||||||| Sbjct: 917 tccttcctaccatatccagcagcatagtg 889
>emb|CT010462.5| Mouse DNA sequence from clone RP23-321N21 on chromosome 12, complete sequence Length = 204912 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 ccacagcaaatagctcccccg 70 ||||||||||||||||||||| Sbjct: 160766 ccacagcaaatagctcccccg 160786
>dbj|AP000845.4| Homo sapiens genomic DNA, chromosome 18p clone:RP11-705O1, complete sequences Length = 142000 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gaacagggttgcacagcagga 109 ||||||||||||||||||||| Sbjct: 90834 gaacagggttgcacagcagga 90814
>gb|AY549184.1| Streptomyces sp. I-1525 cytochrome P450 monooxygenase CYP107Z6 (ema5) gene, complete cds Length = 1526 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ctgctccagcagcttgacca 332 |||||||||||||||||||| Sbjct: 436 ctgctccagcagcttgacca 417
>ref|XM_527300.1| PREDICTED: Pan troglodytes similar to zinc finger protein 452; zinc finger protein 305 pseudogene 2 (LOC471922), mRNA Length = 4191 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 tcaaaagaagatccacgcat 433 |||||||||||||||||||| Sbjct: 3796 tcaaaagaagatccacgcat 3815
>ref|XM_474534.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 630 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 ctgctccagcagcttgaccacctc 336 |||||||| ||||||||||||||| Sbjct: 27 ctgctccatcagcttgaccacctc 4
>gb|AY517631.1| Homo sapiens zinc finger protein 452 (ZNF452) mRNA, complete cds Length = 4895 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 tcaaaagaagatccacgcat 433 |||||||||||||||||||| Sbjct: 4201 tcaaaagaagatccacgcat 4220
>gb|AC005062.1| Homo sapiens BAC clone CTB-95A14 from 7, complete sequence Length = 119927 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 gtgcttcaaaagaagatcca 428 |||||||||||||||||||| Sbjct: 3405 gtgcttcaaaagaagatcca 3424
>emb|AL161940.6| Human DNA sequence from clone RP11-459I16 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 98221 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 ctgttgagcttggccacctc 363 |||||||||||||||||||| Sbjct: 61072 ctgttgagcttggccacctc 61091
>gb|AC157990.4| Mus musculus chromosome 5, clone RP24-307I24, complete sequence Length = 153860 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 atggagatggacaaagaaca 93 |||||||||||||||||||| Sbjct: 109377 atggagatggacaaagaaca 109396
>emb|AL731581.2|OSJN00228 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022F16, complete sequence Length = 154397 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 ctgctccagcagcttgaccacctc 336 |||||||| ||||||||||||||| Sbjct: 35670 ctgctccatcagcttgaccacctc 35647
>emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 83 Length = 197859 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 311 tcctgctccagcagcttgaccacctcgtcctggctgttgagctt 354 |||| ||| |||||||| |||||||| ||||||||||||||| Sbjct: 106363 tccttctcaagcagcttcaccacctccagctggctgttgagctt 106320
>emb|AL117188.1|ATF15J1 Arabidopsis thaliana DNA chromosome 4, BAC clone F15J1, partial sequence (ESSA project) Length = 27408 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 311 tcctgctccagcagcttgaccacctcgtcctggctgttgagctt 354 |||| ||| |||||||| |||||||| ||||||||||||||| Sbjct: 8012 tccttctcaagcagcttcaccacctccagctggctgttgagctt 7969
>emb|AL049543.17|HS1186N24 Human DNA sequence from clone RP5-1186N24 on chromosome 6p21.2-22.2. Contains part of a novel zinc finger protein gene, the GPX5 gene for glutathione peroxidase 5 (epididymal androgen-related protein), the 5' end of a glutathion peroxidase pseudogene, ESTs, STSs, GSSs and a CpG island, complete sequence Length = 95594 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 tcaaaagaagatccacgcat 433 |||||||||||||||||||| Sbjct: 33308 tcaaaagaagatccacgcat 33327
>emb|AL713690.1|HSM803047 Homo sapiens mRNA; cDNA DKFZp434N092 (from clone DKFZp434N092) Length = 1000 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 tcaaaagaagatccacgcat 433 |||||||||||||||||||| Sbjct: 314 tcaaaagaagatccacgcat 333
>gb|AC097653.2| Homo sapiens BAC clone RP11-148L24 from 4, complete sequence Length = 145496 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 agagaccagaaacaaggaag 258 |||||||||||||||||||| Sbjct: 68186 agagaccagaaacaaggaag 68205
>gb|AY258007.1| Nicotiana tabacum TGB12K interacting protein 2 (TIP2) mRNA, complete cds Length = 1050 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 434 tccttcctaccgtatccagcggcatagtgcag 465 ||||| || ||||||||||| ||||||||||| Sbjct: 914 tcctttcttccgtatccagcagcatagtgcag 883
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 ctgctccagcagcttgaccacctc 336 |||||||| ||||||||||||||| Sbjct: 3926355 ctgctccatcagcttgaccacctc 3926332
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcacagcaggatcaaaccaa 118 |||||||||||||||||||| Sbjct: 2418525 gcacagcaggatcaaaccaa 2418506
>emb|BX647791.1|HSM807937 Homo sapiens mRNA; cDNA DKFZp686N1886 (from clone DKFZp686N1886) Length = 4863 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 tcaaaagaagatccacgcat 433 |||||||||||||||||||| Sbjct: 4169 tcaaaagaagatccacgcat 4188
>gb|AC102730.15| Mus musculus chromosome 5, clone RP24-194J15, complete sequence Length = 167135 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 atggagatggacaaagaaca 93 |||||||||||||||||||| Sbjct: 3783 atggagatggacaaagaaca 3764
>gb|BC111742.1| Homo sapiens zinc finger protein 452, mRNA (cDNA clone MGC:133310 IMAGE:40038617), complete cds Length = 4166 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 tcaaaagaagatccacgcat 433 |||||||||||||||||||| Sbjct: 3721 tcaaaagaagatccacgcat 3740
>gb|BC111741.1| Homo sapiens zinc finger protein 452, mRNA (cDNA clone MGC:133311 IMAGE:40038622), complete cds Length = 4166 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 tcaaaagaagatccacgcat 433 |||||||||||||||||||| Sbjct: 3721 tcaaaagaagatccacgcat 3740
>ref|NM_052923.1| Homo sapiens zinc finger protein 452 (ZNF452), mRNA Length = 4895 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 tcaaaagaagatccacgcat 433 |||||||||||||||||||| Sbjct: 4201 tcaaaagaagatccacgcat 4220
>emb|AL832486.1|HSM803794 Homo sapiens mRNA; cDNA DKFZp686A1722 (from clone DKFZp686A1722) Length = 4091 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 tcaaaagaagatccacgcat 433 |||||||||||||||||||| Sbjct: 3316 tcaaaagaagatccacgcat 3335
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcacagcaggatcaaaccaa 118 |||||||||||||||||||| Sbjct: 2418469 gcacagcaggatcaaaccaa 2418450
>emb|AL954364.5|CNS08CCZ Oryza sativa chromosome 12, . BAC OSJNBa0023M16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 156258 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gcacagcaggatcaaaccaa 118 |||||||||||||||||||| Sbjct: 143716 gcacagcaggatcaaaccaa 143697
>gb|BC110834.1| Homo sapiens zinc finger protein 452, mRNA (cDNA clone MGC:131782 IMAGE:6499684), complete cds Length = 4619 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 tcaaaagaagatccacgcat 433 |||||||||||||||||||| Sbjct: 3929 tcaaaagaagatccacgcat 3948
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 gaccaacaccatgccacaac 226 |||||||||||||||||||| Sbjct: 417598 gaccaacaccatgccacaac 417579
>dbj|AB067512.1| Homo sapiens mRNA for KIAA1925 protein, partial cds Length = 3726 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 tcaaaagaagatccacgcat 433 |||||||||||||||||||| Sbjct: 3051 tcaaaagaagatccacgcat 3070 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,735,009 Number of Sequences: 3902068 Number of extensions: 3735009 Number of successful extensions: 62314 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 72 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 62040 Number of HSP's gapped (non-prelim): 257 length of query: 515 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 492 effective length of database: 17,143,297,704 effective search space: 8434502470368 effective search space used: 8434502470368 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)