ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63h14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009112.1| Triticum aestivum clone wl1.pk0008.c2:fis, full i... 789 0.0
2gb|BT009457.1| Triticum aestivum clone wlp1c.pk007.f6:fis, full ... 763 0.0
3gb|BT009148.1| Triticum aestivum clone wl1n.pk0059.g7:fis, full ... 729 0.0
4dbj|AK065019.1| Oryza sativa (japonica cultivar-group) cDNA clon... 377 e-101
5dbj|AK061771.1| Oryza sativa (japonica cultivar-group) cDNA clon... 377 e-101
6gb|AY103957.1| Zea mays PCO116832 mRNA sequence 353 4e-94
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 210 3e-51
8dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic D... 210 3e-51
9dbj|AB017480.2| Nicotiana tabacum mRNA for chloroplast FtsH prot... 88 3e-14
10emb|X90472.1|CAATPASE C.annuum mRNA for ATPase protein 78 3e-11
11gb|AF332134.1| Medicago sativa FtsH protease (FtsH) mRNA, comple... 62 2e-06
12ref|NM_103909.3| Arabidopsis thaliana FTSH1; ATP-dependent pepti... 60 8e-06
13gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genom... 60 8e-06
14emb|Y12780.1|ATAAAA A.thaliana mRNA for ATPase, partial 60 8e-06
15emb|X99808.1|ATFTSH A.thaliana mRNA for chloroplast FtsH protease 60 8e-06
16gb|AY123034.1| Arabidopsis thaliana putative chloroplast FtsH pr... 60 8e-06
17gb|AY091095.1| Arabidopsis thaliana putative chloroplast FtsH pr... 60 8e-06
18ref|NM_123592.2| Arabidopsis thaliana VAR1 (VARIEGATED 1); ATP-d... 56 1e-04
19gb|AY126987.1| Arabidopsis thaliana AT5g42270/K5J14_7 mRNA, comp... 56 1e-04
20dbj|AB023032.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 56 1e-04
21emb|BX815046.1|CNS0AE0R Arabidopsis thaliana Full-length cDNA Co... 54 5e-04
22emb|AL355537.11| Human DNA sequence from clone RP11-442O18 on ch... 44 0.46
23gb|AC162693.5| Mus musculus chromosome 15, clone RP24-89G21, com... 42 1.8
24gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome 42 1.8
25gb|AC021667.21|AC021667 Mus musculus, clone RP23-304J12, complet... 42 1.8
26gb|BT016970.1| Zea mays clone E04912707E08.c mRNA sequence 40 7.1
27gb|AC009395.7| Drosophila melanogaster clone BACR01D01, complete... 40 7.1
28gb|AE009134.1| Agrobacterium tumefaciens str. C58 circular chrom... 40 7.1
29gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.1
30gb|AC130218.4| Mus musculus BAC clone RP23-121N18 from chromosom... 40 7.1
31gb|AY094953.1| Drosophila melanogaster RH69586 full insert cDNA 40 7.1
32gb|AC144484.5| Medicago truncatula clone mth2-30o16, complete se... 40 7.1
33gb|AC152818.17| Medicago truncatula clone mth2-85g12, complete s... 40 7.1
34emb|AL513542.11| Human DNA sequence from clone RP11-129J12 on ch... 40 7.1
35emb|AL353719.10| Human DNA sequence from clone RP11-85A1 on chro... 40 7.1
36emb|AL096773.6|HS1000E10 Human DNA sequence from clone RP5-1000E... 40 7.1
37emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete... 40 7.1
38emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome 40 7.1
39emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, comple... 40 7.1
40gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 40 7.1
41emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4,... 40 7.1
42ref|NM_169826.1| Drosophila melanogaster CG31224-RA (CG31224), mRNA 40 7.1
43ref|NM_078959.3| Drosophila melanogaster Peroxiredoxin 2540 CG11... 40 7.1
44gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 40 7.1
45gb|AY075377.1| Drosophila melanogaster LD06123 full length cDNA 40 7.1
46gb|AY070952.1| Drosophila melanogaster RE05093 full length cDNA 40 7.1
47gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence 40 7.1
48dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
49dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
50dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
51gb|AC007398.6|AC007398 Drosophila melanogaster, chromosome 2R, r... 40 7.1
52gb|AC007812.6|AC007812 Drosophila melanogaster, chromosome 3R, r... 40 7.1
53gb|BT003589.1| Drosophila melanogaster LD03662 full insert cDNA 40 7.1
54dbj|AP003520.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
55gb|AC140071.4| Mus musculus BAC clone RP23-394K8 from 3, complet... 40 7.1
56emb|CR450802.8| Zebrafish DNA sequence from clone CH211-197I12 i... 40 7.1
57emb|AL772158.6| Zebrafish DNA sequence from clone CH211-128N21 i... 40 7.1
58emb|BX005362.6| Zebrafish DNA sequence from clone CH211-159C12 i... 40 7.1
59gb|AE003723.5| Drosophila melanogaster chromosome 3R, section 61... 40 7.1
60gb|AE003829.4| Drosophila melanogaster chromosome 2R, section 21... 40 7.1
61dbj|AB100244.1| Penicillium camemberti pyrG gene for orotidine-5... 40 7.1
62gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
63emb|AL845343.5|CNS08CB5 Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.1
64emb|CR974592.5| Mouse DNA sequence from clone RP23-56C15 on chro... 40 7.1
65gb|CP000036.1| Shigella boydii Sb227, complete genome 40 7.1
66gb|CP000038.1| Shigella sonnei Ss046, complete genome 40 7.1 
>gb|BT009112.1| Triticum aestivum clone wl1.pk0008.c2:fis, full insert mRNA
           sequence
          Length = 654

 Score =  789 bits (398), Expect = 0.0
 Identities = 498/529 (94%), Gaps = 8/529 (1%)
 Strand = Plus / Minus

                                                                       
Query: 6   tgtattaatncgacgcactcagtgtcagtaca----tttttacaaggaactatacaaaca 61
           ||||||||| || ||| |||||||||||||||    ||||||||||||||||||||||||
Sbjct: 615 tgtattaat-cggcgcgctcagtgtcagtacaggcatttttacaaggaactatacaaaca 557

                                                                       
Query: 62  tgtttgcaaaaacaacatttttactagatcaatgtggttcctacaagctggaccctcgta 121
           |||||||  ||| |||||||||||||||||||||||||||||||||  ||||||||||||
Sbjct: 556 tgtttgcggaaagaacatttttactagatcaatgtggttcctacaacttggaccctcgta 497

                                                                       
Query: 122 taaccgccgaaaacatacagggcatgacggggcgacttatgcgacaaacagctccgcctg 181
           ||| | | ||||||||||| |||| |||  | ||||||||||||| |||||||| |||||
Sbjct: 496 taatcacggaaaacatacaaggcacgacaagtcgacttatgcgacgaacagctctgcctg 437

                                                                       
Query: 182 cccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 377

                                                                       
Query: 242 gttggcgagcctgtggaggatgtcgatgtgggtgttgatgatctgcgtcgcccgcgagta 301
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gttggcgagcctgtggaggatatcgatgtgggtgttgatgatctgcgtcgcccgcgagta 317

                                                                       
Query: 302 ggccgtctccacgagttccctgacctcggcatctacgatgtccgccgtggccatcgagta 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ggccgtctccacgagttccctgacctcggcatctacgatgtccgccgtggccatcgagta 257

                                                                       
Query: 362 gtccttctggctcgacatctgctggcccaagaaagggttt---ccaccagatgacccaat 418
           ||||||||||||||||||||||||||||||||||||||||   |||||||||||||| ||
Sbjct: 256 gtccttctggctcgacatctgctggcccaagaaagggtttccaccaccagatgacccgat 197

                                                                       
Query: 419 cgcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacg 478
            || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 tgcgacttgcccaatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacg 137

                                                            
Query: 479 tgagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttgg 527
           ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 136 tgagacctgcatgaagtcgctggatgccccagttgtcacattgtcttgg 88
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>gb|BT009457.1| Triticum aestivum clone wlp1c.pk007.f6:fis, full insert mRNA sequence
          Length = 1556

 Score =  763 bits (385), Expect = 0.0
 Identities = 490/522 (93%), Gaps = 11/522 (2%)
 Strand = Plus / Minus

                                                                        
Query: 17   gacgcactcagtgtcagtaca-----tttttacaaggaactatacaaacatgtttgcaaa 71
            ||||| |||||||||||||||     ||||||||||||||||||||||||||||||| ||
Sbjct: 1514 gacgcgctcagtgtcagtacaggtattttttacaaggaactatacaaacatgtttgcgaa 1455

                                                                        
Query: 72   aacaacattttt-actagatcaatgtggttcctacaagctggaccctcgtataaccgccg 130
            || ||||||||| ||||||||||||||||||||||||| ||||||||||||||| | || 
Sbjct: 1454 aagaacattttttactagatcaatgtggttcctacaagttggaccctcgtataatcacca 1395

                                                                        
Query: 131  aaaa-catacagggcatg----acggggcgacttatgcgacaaacagctccgcctgcccg 185
            |||| ||||||||||| |    ||  | ||||||||||||| |||||||| |||||||||
Sbjct: 1394 aaaaacatacagggcacgcacgacaagtcgacttatgcgacgaacagctctgcctgcccg 1335

                                                                        
Query: 186  tcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggaggttg 245
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1334 tcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggaggttg 1275

                                                                        
Query: 246  gcgagcctgtggaggatgtcgatgtgggtgttgatgatctgcgtcgcccgcgagtaggcc 305
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1274 gcgagcctgtggaggatgtcgatgtgggtgttgatgatctgcgtcgcccgcgagtaggcc 1215

                                                                        
Query: 306  gtctccacgagttccctgacctcggcatctacgatgtccgccgtggccatcgagtagtcc 365
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1214 gtctccacgagttccctgacctcggcgtctacgatgtccgccgtggccatcgagtagtcc 1155

                                                                        
Query: 366  ttctggctcgacatctgctggcccaagaaagggtttccaccagatgacccaatcgcaact 425
            ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||
Sbjct: 1154 ttctggctcgacatctgctggcccaagaaagggtttccaccagatgatccgatcgcgact 1095

                                                                        
Query: 426  tgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgtgagacc 485
            ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 tgcccaatcttcttactgaacccaaatctttcaaccatttgtctggcgacacgtgagacc 1035

                                                      
Query: 486  tgcatgaagtcgctggatgccccagttgtcacgttgtcttgg 527
            ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 1034 tgcatgaagtcactggatgccccagttgtcacattgtcttgg 993
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>gb|BT009148.1| Triticum aestivum clone wl1n.pk0059.g7:fis, full insert mRNA
           sequence
          Length = 890

 Score =  729 bits (368), Expect = 0.0
 Identities = 462/491 (94%), Gaps = 8/491 (1%)
 Strand = Plus / Minus

                                                                       
Query: 38  tttttacaaggaa-ctatacaaacatgtttgcaaaaacaacatttttactagatcaatgt 96
           ||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 814 tttttacaaggaaactatacaaacatgtttgcgaaaagaacatttttactagatcaatgt 755

                                                                       
Query: 97  ggttcctacaagctggaccctcgtataaccgccgaaaa-catacagggcatgacggggcg 155
           |||||||||||| ||||||||||| ||| | ||||||| ||||||||      || |  |
Sbjct: 754 ggttcctacaagttggaccctcgtgtaatcaccgaaaaacatacagg------cgagttg 701

                                                                       
Query: 156 acttatgcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccg 215
           ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 700 acttatgcgacgaacagctctgcctgcccgtcgatgaagaggctcatgaactcctccccg 641

                                                                       
Query: 216 tccacggtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtg 275
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tccacggtctccttctcgatgaggaggttggcgagcctgtggaggatgtcgatgtgggtg 581

                                                                       
Query: 276 ttgatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatct 335
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 580 ttgatgatctgcgtcgcgcgcgagtaggccgtctccacgagttccctgacctcggcgtct 521

                                                                       
Query: 336 acgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaa 395
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 acgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaa 461

                                                                       
Query: 396 gggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctt 455
           |||||||||||||||||||| || || |||||||| |||||||||||||||||||| |||
Sbjct: 460 gggtttccaccagatgacccgatggcgacttgcccaatcttcttgctgaacccaaacctt 401

                                                                       
Query: 456 tcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtc 515
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 400 tcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccggttgtc 341

                      
Query: 516 acgttgtcttg 526
           || ||||||||
Sbjct: 340 acattgtcttg 330
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>dbj|AK065019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F19, full
            insert sequence
          Length = 2378

 Score =  377 bits (190), Expect = e-101
 Identities = 322/366 (87%)
 Strand = Plus / Minus

                                                                        
Query: 162  gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 221
            |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| 
Sbjct: 2093 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 2034

                                                                        
Query: 222  gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 281
            ||||||||||| ||||| || |  || ||| ||||||||||||||||||| ||  |||||
Sbjct: 2033 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 1974

                                                                        
Query: 282  atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 341
            |||||||| || |  ||||||||| |||||||||| ||||| ||||| ||||| || |  
Sbjct: 1973 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 1914

                                                                        
Query: 342  tccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaagggttt 401
            ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1913 tccgcggtggccatcgagtagtccttctggctcgacatctgctggcccaagaaaggattt 1854

                                                                        
Query: 402  ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaacc 461
            ||||||| |   |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1853 ccaccaggtccaccaatcgcaacttgcccgatcttcttgctgaatccaaatctttcaacc 1794

                                                                        
Query: 462  atttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttg 521
            |||||||| || |||||||| |||||||| || ||| |||| |||||||||||||| || 
Sbjct: 1793 atttgtcttgcaacacgtgaaacctgcataaaatcgttggaggccccagttgtcacattt 1734

                  
Query: 522  tcttgg 527
            ||||||
Sbjct: 1733 tcttgg 1728
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>dbj|AK061771.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C10, full
            insert sequence
          Length = 1325

 Score =  377 bits (190), Expect = e-101
 Identities = 322/366 (87%)
 Strand = Plus / Minus

                                                                        
Query: 162  gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 221
            |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| 
Sbjct: 1149 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 1090

                                                                        
Query: 222  gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 281
            ||||||||||| ||||| || |  || ||| ||||||||||||||||||| ||  |||||
Sbjct: 1089 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 1030

                                                                        
Query: 282  atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 341
            |||||||| || |  ||||||||| |||||||||| ||||| ||||| ||||| || |  
Sbjct: 1029 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 970

                                                                        
Query: 342  tccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaagggttt 401
            ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 969  tccgcggtggccatcgagtagtccttctggctcgacatctgctggcccaagaaaggattt 910

                                                                        
Query: 402  ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaacc 461
            ||||||| |   |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 909  ccaccaggtccaccaatcgcaacttgcccgatcttcttgctgaatccaaatctttcaacc 850

                                                                        
Query: 462  atttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttg 521
            |||||||| || |||||||| |||||||| || ||| |||| |||||||||||||| || 
Sbjct: 849  atttgtcttgcaacacgtgaaacctgcataaaatcgttggaggccccagttgtcacattt 790

                  
Query: 522  tcttgg 527
            ||||||
Sbjct: 789  tcttgg 784
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>gb|AY103957.1| Zea mays PCO116832 mRNA sequence
          Length = 1820

 Score =  353 bits (178), Expect = 4e-94
 Identities = 319/366 (87%)
 Strand = Plus / Minus

                                                                        
Query: 162  gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 221
            |||||||||||||| ||||| ||||| ||||| | |||||||||||||||||||||||||
Sbjct: 1445 gcgacaaacagctcggcctggccgtcaatgaacaagctcatgaactcctccccgtccacg 1386

                                                                        
Query: 222  gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 281
            |||||||||||||||||||| | ||||||| ||||||||||||||||||| ||| |||| 
Sbjct: 1385 gtctccttctcgatcaggagctgggcgagcttgtggaggatgtcgatgtgcgtggtgatt 1326

                                                                        
Query: 282  atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 341
            |||||| | || |  ||||||||| |||||||||||||||| |||||||| || || |  
Sbjct: 1325 atctgccttgctctagagtaggccttctccacgagttccctcacctcggcgtccacaaca 1266

                                                                        
Query: 342  tccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaagggttt 401
            ||||| || ||||| ||||||||||||||||| |||||||| || |||||||||||||||
Sbjct: 1265 tccgctgttgccatagagtagtccttctggcttgacatctgttgccccaagaaagggttt 1206

                                                                        
Query: 402  ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaacc 461
            ||||| | |  ||| ||||||||||| ||||||||||| ||||| ||||||||||| |||
Sbjct: 1205 ccacccggtcccccgatcgcaacttggccgatcttcttactgaatccaaatctttcgacc 1146

                                                                        
Query: 462  atttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttg 521
            || || || ||||||||||| || |||||||||||| |||| || || ||||||||||||
Sbjct: 1145 atctgccttgcgacacgtgacacttgcatgaagtcgttggaagctcctgttgtcacgttg 1086

                  
Query: 522  tcttgg 527
            ||||||
Sbjct: 1085 tcttgg 1080



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 93   atgtggttcctacaagctgg 112
            ||||||||||||||||||||
Sbjct: 1545 atgtggttcctacaagctgg 1526
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  210 bits (106), Expect = 3e-51
 Identities = 193/222 (86%)
 Strand = Plus / Plus

                                                                            
Query: 162      gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 221
                |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| 
Sbjct: 30354728 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 30354787

                                                                            
Query: 222      gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 281
                ||||||||||| ||||| || |  || ||| ||||||||||||||||||| ||  |||||
Sbjct: 30354788 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 30354847

                                                                            
Query: 282      atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 341
                |||||||| || |  ||||||||| |||||||||| ||||| ||||| ||||| || |  
Sbjct: 30354848 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 30354907

                                                          
Query: 342      tccgccgtggccatcgagtagtccttctggctcgacatctgc 383
                ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 30354908 tccgcggtggccatcgagtagtccttctggctcgacatctgc 30354949



 Score =  174 bits (88), Expect = 2e-40
 Identities = 133/148 (89%)
 Strand = Plus / Plus

                                                                            
Query: 380      ctgctggcccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttctt 439
                |||||||||||||||||| |||||||||| |   ||||||||||||||||||||||||||
Sbjct: 30359326 ctgctggcccaagaaaggatttccaccaggtccaccaatcgcaacttgcccgatcttctt 30359385

                                                                            
Query: 440      gctgaacccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgct 499
                |||||| ||||||||||||||||||||||| || |||||||| |||||||| || ||| |
Sbjct: 30359386 gctgaatccaaatctttcaaccatttgtcttgcaacacgtgaaacctgcataaaatcgtt 30359445

                                            
Query: 500      ggatgccccagttgtcacgttgtcttgg 527
                ||| |||||||||||||| || ||||||
Sbjct: 30359446 ggaggccccagttgtcacattttcttgg 30359473



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 60       catgtttgcaaaaacaacat 79
                ||||||||||||||||||||
Sbjct: 15678432 catgtttgcaaaaacaacat 15678451
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>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0548E04
          Length = 138037

 Score =  210 bits (106), Expect = 3e-51
 Identities = 193/222 (86%)
 Strand = Plus / Plus

                                                                          
Query: 162    gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 221
              |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| 
Sbjct: 101323 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 101382

                                                                          
Query: 222    gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 281
              ||||||||||| ||||| || |  || ||| ||||||||||||||||||| ||  |||||
Sbjct: 101383 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 101442

                                                                          
Query: 282    atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 341
              |||||||| || |  ||||||||| |||||||||| ||||| ||||| ||||| || |  
Sbjct: 101443 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 101502

                                                        
Query: 342    tccgccgtggccatcgagtagtccttctggctcgacatctgc 383
              ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 101503 tccgcggtggccatcgagtagtccttctggctcgacatctgc 101544



 Score =  174 bits (88), Expect = 2e-40
 Identities = 133/148 (89%)
 Strand = Plus / Plus

                                                                          
Query: 380    ctgctggcccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttctt 439
              |||||||||||||||||| |||||||||| |   ||||||||||||||||||||||||||
Sbjct: 105921 ctgctggcccaagaaaggatttccaccaggtccaccaatcgcaacttgcccgatcttctt 105980

                                                                          
Query: 440    gctgaacccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgct 499
              |||||| ||||||||||||||||||||||| || |||||||| |||||||| || ||| |
Sbjct: 105981 gctgaatccaaatctttcaaccatttgtcttgcaacacgtgaaacctgcataaaatcgtt 106040

                                          
Query: 500    ggatgccccagttgtcacgttgtcttgg 527
              ||| |||||||||||||| || ||||||
Sbjct: 106041 ggaggccccagttgtcacattttcttgg 106068
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>dbj|AB017480.2| Nicotiana tabacum mRNA for chloroplast FtsH protease, complete cds
          Length = 2447

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 143/176 (81%)
 Strand = Plus / Minus

                                                                        
Query: 351  gccatcgagtagtccttctggctcgacatctgctggcccaagaaagggtttccaccagat 410
            ||||| |||||||| |||||| | |||||||| || || | |||||| ||||| |||  |
Sbjct: 1952 gccatggagtagtctttctgggttgacatctgttgacctaggaaaggatttcctccacct 1893

                                                                        
Query: 411  gacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctg 470
               ||||| |||||||| || ||||| ||||||||||| ||||| |||||||| || || 
Sbjct: 1892 cctccaatggcaacttgtccaatctttttgctgaaccctaatctctcaaccatctgcctt 1833

                                                                    
Query: 471  gcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttg 526
            || || ||||| || |||||||| ||| | |||||||||||||| ||||| |||||
Sbjct: 1832 gccactcgtgaaacttgcatgaaatcgttagatgccccagttgttacgttatcttg 1777
to top
>emb|X90472.1|CAATPASE C.annuum mRNA for ATPase protein
          Length = 1989

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 141/175 (80%)
 Strand = Plus / Minus

                                                                        
Query: 351  gccatcgagtagtccttctggctcgacatctgctggcccaagaaagggtttccaccagat 410
            ||||| ||||||||||||||| | |||||||| ||||| | |||||||||||| |||  |
Sbjct: 1864 gccatggagtagtccttctgggttgacatctgttggcctaggaaagggtttcctccacct 1805

                                                                        
Query: 411  gacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctg 470
               || || |||||||| || ||||| |||||||| || ||||| |||||||| || || 
Sbjct: 1804 cctccgatggcaacttggcctatctttttgctgaaacctaatctctcaaccatctgcctc 1745

                                                                   
Query: 471  gcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttgtctt 525
            || || ||||| || |||||||| ||  | ||||| ||||| || ||||||||||
Sbjct: 1744 gccactcgtgaaacttgcatgaaatcattagatgcgccagtggttacgttgtctt 1690
to top
>gb|AF332134.1| Medicago sativa FtsH protease (FtsH) mRNA, complete cds; chloroplast
            gene for chloroplast product
          Length = 2352

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 438  ttgctgaacccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtc 496
            ||||||||||||||||| |||||||| ||||| || || ||||| || |||||||||||
Sbjct: 1893 ttgctgaacccaaatctctcaaccatctgtcttgccactcgtgaaacttgcatgaagtc 1835
to top
>ref|NM_103909.3| Arabidopsis thaliana FTSH1; ATP-dependent peptidase/ ATPase/
            metallopeptidase AT1G50250 (FTSH1) mRNA, complete cds
          Length = 2473

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                        
Query: 420  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 479
            |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 2022 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1963

                          
Query: 480  gagacctgcatgaa 493
            || |||||||||||
Sbjct: 1962 gacacctgcatgaa 1949



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 183  ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 241
            ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 2259 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2201
to top
>gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genomic sequence, complete
             sequence
          Length = 100975

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                         
Query: 420   gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 479
             |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 62107 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 62048

                           
Query: 480   gagacctgcatgaa 493
             || |||||||||||
Sbjct: 62047 gacacctgcatgaa 62034



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 183   ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 241
             ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 62432 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 62374
to top
>emb|Y12780.1|ATAAAA A.thaliana mRNA for ATPase, partial
          Length = 2190

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                        
Query: 420  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 479
            |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 1685 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1626

                          
Query: 480  gagacctgcatgaa 493
            || |||||||||||
Sbjct: 1625 gacacctgcatgaa 1612
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>emb|X99808.1|ATFTSH A.thaliana mRNA for chloroplast FtsH protease
          Length = 2447

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                        
Query: 420  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 479
            |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 2020 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1961

                          
Query: 480  gagacctgcatgaa 493
            || |||||||||||
Sbjct: 1960 gacacctgcatgaa 1947



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 183  ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 241
            ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 2257 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2199
to top
>gb|AY123034.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250)
            mRNA, complete cds
          Length = 2182

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                        
Query: 420  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 479
            |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 1889 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1830

                          
Query: 480  gagacctgcatgaa 493
            || |||||||||||
Sbjct: 1829 gacacctgcatgaa 1816



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 183  ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 241
            ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 2126 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2068
to top
>gb|AY091095.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250)
            mRNA, complete cds
          Length = 2452

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                        
Query: 420  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 479
            |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 1985 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1926

                          
Query: 480  gagacctgcatgaa 493
            || |||||||||||
Sbjct: 1925 gacacctgcatgaa 1912



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 183  ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 241
            ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 2222 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2164
to top
>ref|NM_123592.2| Arabidopsis thaliana VAR1 (VARIEGATED 1); ATP-dependent peptidase/
            ATPase/ metallopeptidase AT5G42270 (VAR1) mRNA, complete
            cds
          Length = 3058

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                        
Query: 387  cccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaac 446
            ||||||||||||||||| || | |   ||||  |||||||| || ||||| |||||||||
Sbjct: 2059 cccaagaaagggtttcctcctgctccaccaactgcaacttgtccaatctttttgctgaac 2000

                                
Query: 447  ccaaatctttcaaccatttg 466
            || ||||| |||||||||||
Sbjct: 1999 ccgaatctctcaaccatttg 1980
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>gb|AY126987.1| Arabidopsis thaliana AT5g42270/K5J14_7 mRNA, complete cds
          Length = 2311

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                        
Query: 387  cccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaac 446
            ||||||||||||||||| || | |   ||||  |||||||| || ||||| |||||||||
Sbjct: 1985 cccaagaaagggtttcctcctgctccaccaactgcaacttgtccaatctttttgctgaac 1926

                                
Query: 447  ccaaatctttcaaccatttg 466
            || ||||| |||||||||||
Sbjct: 1925 ccgaatctctcaaccatttg 1906
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>dbj|AB023032.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K5J14
          Length = 59762

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                         
Query: 387   cccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaac 446
             ||||||||||||||||| || | |   ||||  |||||||| || ||||| |||||||||
Sbjct: 43337 cccaagaaagggtttcctcctgctccaccaactgcaacttgtccaatctttttgctgaac 43278

                                 
Query: 447   ccaaatctttcaaccatttg 466
             || ||||| |||||||||||
Sbjct: 43277 ccgaatctctcaaccatttg 43258
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>emb|BX815046.1|CNS0AE0R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS28ZC04 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2428

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 420  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttg 466
            |||||||| || ||||| ||||||||||||||||| |||| ||||||
Sbjct: 2021 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttg 1975



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 183  ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 241
            ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 2258 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2200
to top
>emb|AL355537.11| Human DNA sequence from clone RP11-442O18 on chromosome 10 Contains three
              novel genes, complete sequence
          Length = 188728

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 62     tgtttgcaaaaacaacattttt 83
              ||||||||||||||||||||||
Sbjct: 113149 tgtttgcaaaaacaacattttt 113128
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>gb|AC162693.5| Mus musculus chromosome 15, clone RP24-89G21, complete sequence
          Length = 159813

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 46     aggaactatacaaacatgttt 66
              |||||||||||||||||||||
Sbjct: 121860 aggaactatacaaacatgttt 121840
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>gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome
          Length = 1176248

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 33     gtacatttttacaaggaactataca 57
              ||||||||||||||||||| |||||
Sbjct: 350178 gtacatttttacaaggaaccataca 350154
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>gb|AC021667.21|AC021667 Mus musculus, clone RP23-304J12, complete sequence
          Length = 203106

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 46     aggaactatacaaacatgttt 66
              |||||||||||||||||||||
Sbjct: 174774 aggaactatacaaacatgttt 174794
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>gb|BT016970.1| Zea mays clone E04912707E08.c mRNA sequence
          Length = 202

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 162 gcgacaaacagctccgcctgcccgtcgatgaa 193
           |||||||||||||| ||||| ||||| |||||
Sbjct: 162 gcgacaaacagctcggcctggccgtcaatgaa 193



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 93  atgtggttcctacaagctgg 112
           ||||||||||||||||||||
Sbjct: 62  atgtggttcctacaagctgg 81
to top
>gb|AC009395.7| Drosophila melanogaster clone BACR01D01, complete sequence
          Length = 189116

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 195    aggctcatgaactcctccccgtcc 218
              |||||||||||||||||| |||||
Sbjct: 125479 aggctcatgaactcctcctcgtcc 125502
to top
>gb|AE009134.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 160
           of 256 of the complete sequence
          Length = 13735

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 cctgcccgtcgatgaagagg 197
           ||||||||||||||||||||
Sbjct: 470 cctgcccgtcgatgaagagg 489
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 70       aaaacaacatttttactaga 89
                ||||||||||||||||||||
Sbjct: 30045234 aaaacaacatttttactaga 30045215
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>gb|AC130218.4| Mus musculus BAC clone RP23-121N18 from chromosome 18, complete
             sequence
          Length = 213673

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   gaagaggctcatgaactcct 210
             ||||||||||||||||||||
Sbjct: 81922 gaagaggctcatgaactcct 81903
to top
>gb|AY094953.1| Drosophila melanogaster RH69586 full insert cDNA
          Length = 870

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 187 cgatgaagaggctcatgaactcctcccc 214
           |||||||||||||||| ||||| |||||
Sbjct: 656 cgatgaagaggctcataaactcttcccc 683
to top
>gb|AC144484.5| Medicago truncatula clone mth2-30o16, complete sequence
          Length = 121144

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    aaacatgtttgcaaaaacaa 76
             ||||||||||||||||||||
Sbjct: 40718 aaacatgtttgcaaaaacaa 40737
to top
>gb|AC152818.17| Medicago truncatula clone mth2-85g12, complete sequence
          Length = 142154

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    aaacatgtttgcaaaaacaa 76
             ||||||||||||||||||||
Sbjct: 40721 aaacatgtttgcaaaaacaa 40740
to top
>emb|AL513542.11| Human DNA sequence from clone RP11-129J12 on chromosome 10 Contains a
             novel gene and three CpG islands, complete sequence
          Length = 46619

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    tttacaaggaactatacaaa 59
             ||||||||||||||||||||
Sbjct: 44932 tttacaaggaactatacaaa 44951
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>emb|AL353719.10| Human DNA sequence from clone RP11-85A1 on chromosome 10 Contains
           the NKX2-3 gene for NK2 transcription factor related,
           locus 3 (Drosophila), the gene for putative
           mitochondrial solute carrier (MRS3/4) and five CpG
           islands, complete sequence
          Length = 123160

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 40  tttacaaggaactatacaaa 59
           ||||||||||||||||||||
Sbjct: 313 tttacaaggaactatacaaa 332
to top
>emb|AL096773.6|HS1000E10 Human DNA sequence from clone RP5-1000E10 on chromosome 1p12-13.3
             Contains the 5' end of the gene for a novel protein
             (FLJ37099), the AMPD1 gene for adenosine monophosphate
             deaminase 1 (isoform M), the NRAS gene for neuroblastoma
             RAS viral (v-ras) oncogene homolog, the gene for
             NRAS-related gene (D1S155E) and the gene for a novel
             protein (FLJ44339), complete sequence
          Length = 140207

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   aatctttcaaccatttgtct 469
             ||||||||||||||||||||
Sbjct: 62486 aatctttcaaccatttgtct 62505
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>emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete genome
          Length = 1512977

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 35      acatttttacaaggaactat 54
               ||||||||||||||||||||
Sbjct: 1065574 acatttttacaaggaactat 1065593
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>emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome
          Length = 1499920

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 35      acatttttacaaggaactat 54
               ||||||||||||||||||||
Sbjct: 1057462 acatttttacaaggaactat 1057481
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>emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, complete genome
          Length = 1516355

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 35      acatttttacaaggaactat 54
               ||||||||||||||||||||
Sbjct: 1086863 acatttttacaaggaactat 1086882
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>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    aaaacaacatttttactaga 89
             ||||||||||||||||||||
Sbjct: 62517 aaaacaacatttttactaga 62536
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>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23,
             complete sequence
          Length = 149353

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    aaaacaacatttttactaga 89
             ||||||||||||||||||||
Sbjct: 52316 aaaacaacatttttactaga 52335
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>ref|NM_169826.1| Drosophila melanogaster CG31224-RA (CG31224), mRNA
          Length = 7059

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 195  aggctcatgaactcctccccgtcc 218
            |||||||||||||||||| |||||
Sbjct: 2447 aggctcatgaactcctcctcgtcc 2424
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>ref|NM_078959.3| Drosophila melanogaster Peroxiredoxin 2540 CG11765-RA (Prx2540-2),
           mRNA
          Length = 868

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 187 cgatgaagaggctcatgaactcctcccc 214
           |||||||||||||||| ||||| |||||
Sbjct: 657 cgatgaagaggctcataaactcttcccc 684
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 178     cctgcccgtcgatgaagagg 197
               ||||||||||||||||||||
Sbjct: 1766640 cctgcccgtcgatgaagagg 1766659
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>gb|AY075377.1| Drosophila melanogaster LD06123 full length cDNA
          Length = 3188

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 195  aggctcatgaactcctccccgtcc 218
            |||||||||||||||||| |||||
Sbjct: 2447 aggctcatgaactcctcctcgtcc 2424
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>gb|AY070952.1| Drosophila melanogaster RE05093 full length cDNA
          Length = 870

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 187 cgatgaagaggctcatgaactcctcccc 214
           |||||||||||||||| ||||| |||||
Sbjct: 655 cgatgaagaggctcataaactcttcccc 682
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>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence
          Length = 181577

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    aaaacaacatttttactaga 89
             ||||||||||||||||||||
Sbjct: 52509 aaaacaacatttttactaga 52528
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 70       aaaacaacatttttactaga 89
                ||||||||||||||||||||
Sbjct: 33621256 aaaacaacatttttactaga 33621275
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 70       aaaacaacatttttactaga 89
                ||||||||||||||||||||
Sbjct: 18087307 aaaacaacatttttactaga 18087326
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 70       aaaacaacatttttactaga 89
                ||||||||||||||||||||
Sbjct: 30136656 aaaacaacatttttactaga 30136637
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>gb|AC007398.6|AC007398 Drosophila melanogaster, chromosome 2R, region 47A-47B, BAC clone
             BACR20O22, complete sequence
          Length = 168567

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 187   cgatgaagaggctcatgaactcctcccc 214
             |||||||||||||||| ||||| |||||
Sbjct: 77043 cgatgaagaggctcataaactcttcccc 77070
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>gb|AC007812.6|AC007812 Drosophila melanogaster, chromosome 3R, region 91C-91C, BAC clone
             BACR01F15, complete sequence
          Length = 186989

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 195   aggctcatgaactcctccccgtcc 218
             |||||||||||||||||| |||||
Sbjct: 35762 aggctcatgaactcctcctcgtcc 35785
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>gb|BT003589.1| Drosophila melanogaster LD03662 full insert cDNA
          Length = 2508

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 195  aggctcatgaactcctccccgtcc 218
            |||||||||||||||||| |||||
Sbjct: 1241 aggctcatgaactcctcctcgtcc 1218
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>dbj|AP003520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0021H10
          Length = 142659

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    catgtttgcaaaaacaacat 79
             ||||||||||||||||||||
Sbjct: 14070 catgtttgcaaaaacaacat 14089
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>gb|AC140071.4| Mus musculus BAC clone RP23-394K8 from 3, complete sequence
          Length = 203896

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    atacaaacatgtttgcaaaa 72
             ||||||||||||||||||||
Sbjct: 48422 atacaaacatgtttgcaaaa 48441
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>emb|CR450802.8| Zebrafish DNA sequence from clone CH211-197I12 in linkage group 22,
             complete sequence
          Length = 186908

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    tgcaaaaacaacatttttac 85
             ||||||||||||||||||||
Sbjct: 35478 tgcaaaaacaacatttttac 35459
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>emb|AL772158.6| Zebrafish DNA sequence from clone CH211-128N21 in linkage group 22,
             complete sequence
          Length = 178046

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    tgcaaaaacaacatttttac 85
             ||||||||||||||||||||
Sbjct: 29442 tgcaaaaacaacatttttac 29461
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>emb|BX005362.6| Zebrafish DNA sequence from clone CH211-159C12 in linkage group 22,
              complete sequence
          Length = 178151

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     tgcaaaaacaacatttttac 85
              ||||||||||||||||||||
Sbjct: 144817 tgcaaaaacaacatttttac 144836
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>gb|AE003723.5| Drosophila melanogaster chromosome 3R, section 61 of 118 of the
             complete sequence
          Length = 255619

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 195   aggctcatgaactcctccccgtcc 218
             |||||||||||||||||| |||||
Sbjct: 48507 aggctcatgaactcctcctcgtcc 48530
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>gb|AE003829.4| Drosophila melanogaster chromosome 2R, section 21 of 73 of the complete
             sequence
          Length = 281782

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 187   cgatgaagaggctcatgaactcctcccc 214
             |||||||||||||||| ||||| |||||
Sbjct: 55947 cgatgaagaggctcataaactcttcccc 55974
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>dbj|AB100244.1| Penicillium camemberti pyrG gene for orotidine-5'-phosphate
            decarboxylase, complete cds
          Length = 2580

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 257  gaggatgtcgatgtgggtgttgat 280
            |||||||||||||||||| |||||
Sbjct: 1353 gaggatgtcgatgtgggttttgat 1330
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 70       aaaacaacatttttactaga 89
                ||||||||||||||||||||
Sbjct: 18013628 aaaacaacatttttactaga 18013647
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>emb|AL845343.5|CNS08CB5 Oryza sativa chromosome 12, . BAC OSJNBa0028O09 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 155927

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    aaaacaacatttttactaga 89
             ||||||||||||||||||||
Sbjct: 40985 aaaacaacatttttactaga 41004
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>emb|CR974592.5| Mouse DNA sequence from clone RP23-56C15 on chromosome 12, complete
             sequence
          Length = 201549

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    tttgcaaaaacaacattttt 83
             ||||||||||||||||||||
Sbjct: 20409 tttgcaaaaacaacattttt 20428
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>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 353     catcgagtagtccttctggc 372
               ||||||||||||||||||||
Sbjct: 2170771 catcgagtagtccttctggc 2170790
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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 353    catcgagtagtccttctggc 372
              ||||||||||||||||||||
Sbjct: 970532 catcgagtagtccttctggc 970551


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,834,264
Number of Sequences: 3902068
Number of extensions: 3834264
Number of successful extensions: 76814
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76375
Number of HSP's gapped (non-prelim): 434
length of query: 527
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 504
effective length of database: 17,143,297,704
effective search space: 8640222042816
effective search space used: 8640222042816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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