Clone Name | rbah63h08 |
---|---|
Clone Library Name | barley_pub |
>SLC2B_HUMAN (Q8NEV8) Slp homolog lacking C2 domains b (Exophilin-5)| Length = 1989 Score = 31.6 bits (70), Expect = 0.48 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +2 Query: 122 SLGLEQELDTRGENRKNKYVQQDEENCNRENPP 220 SLG +E D G+N+KN+++ EN R + P Sbjct: 917 SLGEREEKDNAGKNQKNQFIVSHSENQERNDSP 949
>GALT_HUMAN (P07902) Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12)| (Gal-1-P uridylyltransferase) (UDP-glucose--hexose-1-phosphate uridylyltransferase) Length = 379 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/53 (33%), Positives = 24/53 (45%) Frame = -1 Query: 311 PESRTVVCAFKHGVKCALSASLYMILVIENREGFRDCSFPHLVAHIYFYGFLP 153 PE R VV A+ V L A + + EN+ CS PH ++ FLP Sbjct: 145 PEIRAVVDAWA-SVTEELGAQYPWVQIFENKGAMMGCSNPHPHCQVWASSFLP 196
>SPRT_PHOLL (Q7N118) Protein sprT| Length = 194 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = -1 Query: 239 ILVIENREGFRDCSFPHLVAHIYFYGFLPWCP 144 +L+IEN++ F D PH +AH+ Y + P Sbjct: 62 VLLIENQQAFIDEVVPHELAHLLVYRYFGKVP 93
>GALT_RAT (P43424) Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12)| (Gal-1-P uridylyltransferase) (UDP-glucose--hexose-1-phosphate uridylyltransferase) Length = 379 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = -1 Query: 311 PESRTVVCAFKHGVKCALSASLYMILVIENREGFRDCSFPHLVAHIYFYGFLP 153 PE R V+ A+ V L A + + EN+ CS PH ++ FLP Sbjct: 145 PEIRAVIDAWA-SVTEELGAQYPWVQIFENKGAMMGCSNPHPHCQVWASNFLP 196
>GALT_MOUSE (Q03249) Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12)| (Gal-1-P uridylyltransferase) (UDP-glucose--hexose-1-phosphate uridylyltransferase) Length = 379 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = -1 Query: 311 PESRTVVCAFKHGVKCALSASLYMILVIENREGFRDCSFPHLVAHIYFYGFLP 153 PE R V+ A+ V L A + + EN+ CS PH ++ FLP Sbjct: 145 PEIRAVIDAWA-SVTEELGAQYPWVQIFENKGAMMGCSNPHPHCQVWASSFLP 196
>GALT_DROME (Q9VMA2) Probable galactose-1-phosphate uridylyltransferase (EC| 2.7.7.12) (Gal-1-P uridylyltransferase) (UDP-glucose--hexose-1-phosphate uridylyltransferase) Length = 350 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = -1 Query: 260 LSASLYMILVIENREGFRDCSFPHLVAHIYFYGFLPWCPAL 138 LSA + + EN+ CS PH I+ FLP P L Sbjct: 140 LSAKYAWVQIFENKGAAMGCSNPHPHCQIWSCSFLPTEPQL 180
>YA93_SCHPO (Q09782) Hypothetical protein C13G6.03 in chromosome I| Length = 758 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/64 (26%), Positives = 31/64 (48%) Frame = -2 Query: 343 ARNVLLFVPNIRRAALWCVPSNTASSVLSLQVYI*Y*SLKIGRVFAIAVFLILLHIFIFT 164 A +LLF A WC+ S++ + S+ + I+ F++ H+F+++ Sbjct: 669 AVGILLFTSVFAGALWWCLHQPKRMMDRSVKTFWIMSSISL-TFLCISCFIMRHHLFVWS 727 Query: 163 VFSP 152 VFSP Sbjct: 728 VFSP 731
>RS2_SPIPL (P34831) 30S ribosomal protein S2| Length = 251 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +3 Query: 135 SKSWTPGEKTVKINMCNKMRKTAIAKTLPIFND 233 ++ W P K NK+ + KTLP+FND Sbjct: 20 TRFWNPKMKPYIFGARNKIHIVNLEKTLPLFND 52
>PLXA2_HUMAN (O75051) Plexin-A2 precursor (Semaphorin receptor OCT)| Length = 1909 Score = 27.3 bits (59), Expect = 9.1 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 4/40 (10%) Frame = -3 Query: 369 RVCVEKQERQETSFFSYLISGEPHCGVC----LQTRRQVC 262 RV VE E Q T+ L SG+PHCG C + +RR C Sbjct: 520 RVPVESCE-QYTTCGECLSSGDPHCGWCALHNMCSRRDKC 558
>PLXA2_MOUSE (P70207) Plexin-A2 precursor (Plexin-2) (Plex 2)| Length = 1884 Score = 27.3 bits (59), Expect = 9.1 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 4/40 (10%) Frame = -3 Query: 369 RVCVEKQERQETSFFSYLISGEPHCGVC----LQTRRQVC 262 RV VE E Q T+ L SG+PHCG C + +RR C Sbjct: 495 RVPVESCE-QYTTCGECLSSGDPHCGWCALHNMCSRRDKC 533 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,771,769 Number of Sequences: 219361 Number of extensions: 969703 Number of successful extensions: 2669 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2616 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2668 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 1386249648 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)