ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah63h06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 274 bits (138), Expect = 3e-70 Identities = 255/294 (86%) Strand = Plus / Plus Query: 231 cctcttctatggtggtgtggtaggcagcaagggcagatttgcaggcattctggatgactt 290 ||||||||||||| |||||||| ||| |||||||||||||||||||||| ||||||| | Sbjct: 14553274 cctcttctatggtagtgtggtaagcaccaagggcagatttgcaggcatttcggatgacct 14553333 Query: 291 ggcatattgattcctcgttatcacgactcacaggcaattcaaggtgctcccaaactttat 350 | ||||| | ||| || ||||| ||||||| |||| ||||||||| ||||||| || Sbjct: 14553334 gacatatcgcttcttcattatcttgactcactggcagttcaaggtggccccaaacagcat 14553393 Query: 351 ttctaaagagggcttccaagagaaatgcgtccgttcccccaaggcaaagtaatcgcaggt 410 |||| ||||| ||||||||||||||||| || |||||||||||||| ||||||||||||| Sbjct: 14553394 ttctgaagagtgcttccaagagaaatgcatctgttcccccaaggcagagtaatcgcaggt 14553453 Query: 411 aagtaatcatttgaggaggaagtgattcaccgaggacgacatcgaagtatgcggtctccc 470 ||| | ||||||||||||||| |||||||| ||||| | ||| |||||||| ||||||| Sbjct: 14553454 aaggtagcatttgaggaggaagagattcaccaaggacaatatcaaagtatgcagtctccc 14553513 Query: 471 ccattccatttagctctgcaatgtcgagtttgtcttcatagaatggatcagatt 524 |||| |||||||||||||||||||| || ||||| ||||| ||||||||||||| Sbjct: 14553514 ccatcccatttagctctgcaatgtcaagcttgtcatcataaaatggatcagatt 14553567 Score = 111 bits (56), Expect = 2e-21 Identities = 143/172 (83%) Strand = Plus / Plus Query: 19 ctaggactcccagaagatgatgtcaccattgtcaccaataaaaccgagatccttgagcct 78 |||||| ||||||||||| || ||||||||||| |||| ||||| | ||||||||| || Sbjct: 14552970 ctaggattcccagaagataatttcaccattgtcgccaactaaaccaatatccttgagtct 14553029 Query: 79 cctttcctggtagtactcaaggtcatctaattcttgctccctctccttgaaaatatcatt 138 || ||| ||||||||||| ||| |||| | ||| | |||||||| ||||||||| |||| Sbjct: 14553030 ccgttcttggtagtactctaggccatccagttcctcctccctctgcttgaaaatgtcatc 14553089 Query: 139 gatttgctctagtactttcttttcacccaccctcacttcaacggcgatttga 190 || |||| ||| |||||||| ||||| |||| ||||||||||| |||||| Sbjct: 14553090 aatctgctgtagcactttcttctcaccggccctgacttcaacggcaatttga 14553141
>dbj|AP005093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1294_G06 Length = 115468 Score = 274 bits (138), Expect = 3e-70 Identities = 255/294 (86%) Strand = Plus / Plus Query: 231 cctcttctatggtggtgtggtaggcagcaagggcagatttgcaggcattctggatgactt 290 ||||||||||||| |||||||| ||| |||||||||||||||||||||| ||||||| | Sbjct: 51563 cctcttctatggtagtgtggtaagcaccaagggcagatttgcaggcatttcggatgacct 51622 Query: 291 ggcatattgattcctcgttatcacgactcacaggcaattcaaggtgctcccaaactttat 350 | ||||| | ||| || ||||| ||||||| |||| ||||||||| ||||||| || Sbjct: 51623 gacatatcgcttcttcattatcttgactcactggcagttcaaggtggccccaaacagcat 51682 Query: 351 ttctaaagagggcttccaagagaaatgcgtccgttcccccaaggcaaagtaatcgcaggt 410 |||| ||||| ||||||||||||||||| || |||||||||||||| ||||||||||||| Sbjct: 51683 ttctgaagagtgcttccaagagaaatgcatctgttcccccaaggcagagtaatcgcaggt 51742 Query: 411 aagtaatcatttgaggaggaagtgattcaccgaggacgacatcgaagtatgcggtctccc 470 ||| | ||||||||||||||| |||||||| ||||| | ||| |||||||| ||||||| Sbjct: 51743 aaggtagcatttgaggaggaagagattcaccaaggacaatatcaaagtatgcagtctccc 51802 Query: 471 ccattccatttagctctgcaatgtcgagtttgtcttcatagaatggatcagatt 524 |||| |||||||||||||||||||| || ||||| ||||| ||||||||||||| Sbjct: 51803 ccatcccatttagctctgcaatgtcaagcttgtcatcataaaatggatcagatt 51856 Score = 111 bits (56), Expect = 2e-21 Identities = 143/172 (83%) Strand = Plus / Plus Query: 19 ctaggactcccagaagatgatgtcaccattgtcaccaataaaaccgagatccttgagcct 78 |||||| ||||||||||| || ||||||||||| |||| ||||| | ||||||||| || Sbjct: 51259 ctaggattcccagaagataatttcaccattgtcgccaactaaaccaatatccttgagtct 51318 Query: 79 cctttcctggtagtactcaaggtcatctaattcttgctccctctccttgaaaatatcatt 138 || ||| ||||||||||| ||| |||| | ||| | |||||||| ||||||||| |||| Sbjct: 51319 ccgttcttggtagtactctaggccatccagttcctcctccctctgcttgaaaatgtcatc 51378 Query: 139 gatttgctctagtactttcttttcacccaccctcacttcaacggcgatttga 190 || |||| ||| |||||||| ||||| |||| ||||||||||| |||||| Sbjct: 51379 aatctgctgtagcactttcttctcaccggccctgacttcaacggcaatttga 51430
>gb|U35620.1|NTU35620 Nicotiana tabacum ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase (rbcmtT) mRNA, complete cds Length = 1989 Score = 48.1 bits (24), Expect = 0.029 Identities = 45/52 (86%) Strand = Plus / Minus Query: 227 tcatcctcttctatggtggtgtggtaggcagcaagggcagatttgcaggcat 278 ||||||||||| || |||||||| ||| ||| ||| ||||||||||| |||| Sbjct: 1358 tcatcctcttcaattgtggtgtgatagccagaaagtgcagatttgcatgcat 1307
>gb|L34291.1|PEARBCM Pisum sativum ribulose-1,5 bisphosphate carboxylase large subunit N-methyltransferase (rbcMT) mRNA, complete cds Length = 1792 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 255 cagcaagggcagatttgcaggc 276 |||||||||||||||||||||| Sbjct: 1286 cagcaagggcagatttgcaggc 1265 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 agatccttgagcctcctttc 84 |||||||||||||||||||| Sbjct: 1473 agatccttgagcctcctttc 1454
>gb|AC110918.9| Mus musculus chromosome 5, clone RP23-189P23, complete sequence Length = 267946 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 gtcttgattgcagatcttctc 212 ||||||||||||||||||||| Sbjct: 226950 gtcttgattgcagatcttctc 226970
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 ctctccttgaaaatatcattgattt 143 ||||| ||||||||||||||||||| Sbjct: 2577587 ctctctttgaaaatatcattgattt 2577563
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 ctctccttgaaaatatcattgattt 143 ||||| ||||||||||||||||||| Sbjct: 2659523 ctctctttgaaaatatcattgattt 2659499
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 ctctccttgaaaatatcattgattt 143 ||||| ||||||||||||||||||| Sbjct: 2588216 ctctctttgaaaatatcattgattt 2588192
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 ctctccttgaaaatatcattgattt 143 ||||| ||||||||||||||||||| Sbjct: 2600160 ctctctttgaaaatatcattgattt 2600136
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 ctctccttgaaaatatcattgattt 143 ||||| ||||||||||||||||||| Sbjct: 2651522 ctctctttgaaaatatcattgattt 2651498
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 ctctccttgaaaatatcattgattt 143 ||||| ||||||||||||||||||| Sbjct: 2598228 ctctctttgaaaatatcattgattt 2598204
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 ctctccttgaaaatatcattgattt 143 ||||| ||||||||||||||||||| Sbjct: 2589097 ctctctttgaaaatatcattgattt 2589073
>emb|CR762425.5| Zebrafish DNA sequence from clone CH211-181P1 in linkage group 18, complete sequence Length = 145468 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 agatgatgtcaccattgtcac 53 ||||||||||||||||||||| Sbjct: 129098 agatgatgtcaccattgtcac 129078
>emb|AL954841.10| Zebrafish DNA sequence from clone DKEY-3B8, complete sequence Length = 149277 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 agatgatgtcaccattgtcac 53 ||||||||||||||||||||| Sbjct: 101544 agatgatgtcaccattgtcac 101564
>gb|AC099614.9| Mus musculus chromosome 15, clone RP23-408O11, complete sequence Length = 201092 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 caaactttatttctaaagag 360 |||||||||||||||||||| Sbjct: 151458 caaactttatttctaaagag 151439
>gb|AC122802.2| Mus musculus BAC clone RP24-136N24 from 6, complete sequence Length = 185938 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tttgtcttcatagaatggat 518 |||||||||||||||||||| Sbjct: 93872 tttgtcttcatagaatggat 93853
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 accgaggacgacatcgaagt 458 |||||||||||||||||||| Sbjct: 929651 accgaggacgacatcgaagt 929632
>emb|AL031965.8|HS355N11 Human DNA sequence from clone RP3-355N11 on chromosome 1q24.1-24.3 Contains the 5' end of a novel gene (FLJ23550), complete sequence Length = 78336 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 tgaaaatatcattgatttgc 145 |||||||||||||||||||| Sbjct: 4729 tgaaaatatcattgatttgc 4748
>gb|AC055855.9| Homo sapiens chromosome 15, clone RP11-352G18, complete sequence Length = 158420 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ctctagtactttcttttcac 164 |||||||||||||||||||| Sbjct: 25629 ctctagtactttcttttcac 25610
>gb|AC162038.6| Mus musculus 6 BAC RP24-576J4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 175787 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 atcctcttctatggtggtgtggta 252 |||||||||| ||||||||||||| Sbjct: 133577 atcctcttctctggtggtgtggta 133600
>emb|AL672121.10| Mouse DNA sequence from clone RP23-256H2 on chromosome 11, complete sequence Length = 36089 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 220 tagctcttcatcctcttctatggt 243 ||||||||||||| |||||||||| Sbjct: 26571 tagctcttcatccccttctatggt 26548
>emb|BX640936.1|HSM807083 Homo sapiens genomic DNA; cDNA DKFZp686L18123 (from clone DKFZp686L18123) Length = 5788 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ctctagtactttcttttcac 164 |||||||||||||||||||| Sbjct: 3091 ctctagtactttcttttcac 3110
>gb|AC036196.10| Homo sapiens chromosome 15, clone RP11-599A21, complete sequence Length = 180366 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 tcttgattgcagatcttctc 212 |||||||||||||||||||| Sbjct: 59505 tcttgattgcagatcttctc 59486
>gb|AC068870.17| Homo sapiens chromosome , clone RP11-775C24, complete sequence Length = 194237 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 tcttgattgcagatcttctc 212 |||||||||||||||||||| Sbjct: 168465 tcttgattgcagatcttctc 168446
>gb|AC092867.7| Homo sapiens 12p BAC RP11-100C20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 195583 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 409 gtaagtaatcatttgaggaggaag 432 ||||||||||||||||||| |||| Sbjct: 147818 gtaagtaatcatttgaggatgaag 147795
>gb|AC087382.11| Homo sapiens chromosome 15, clone RP11-653J6, complete sequence Length = 227632 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ctctagtactttcttttcac 164 |||||||||||||||||||| Sbjct: 22584 ctctagtactttcttttcac 22603
>gb|AC023796.22| Homo sapiens 12p BAC RP11-625L16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 173342 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 409 gtaagtaatcatttgaggaggaag 432 ||||||||||||||||||| |||| Sbjct: 171654 gtaagtaatcatttgaggatgaag 171631
>gb|AF269422.1|AF269422 Staphylococcus epidermidis strain SR1 clone step.1003e09 genomic sequence Length = 2913 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 agtagctcttcatcctcttc 237 |||||||||||||||||||| Sbjct: 1335 agtagctcttcatcctcttc 1316
>emb|BX548025.9| Zebrafish DNA sequence from clone DKEY-237J22 in linkage group 9, complete sequence Length = 134425 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 83 tcctggtagtactcaaggtcatctaatt 110 ||||||| ||||||||||||||||||| Sbjct: 23156 tcctggtcatactcaaggtcatctaatt 23129
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 ttgcagatcttctctctcca 218 |||||||||||||||||||| Sbjct: 149971 ttgcagatcttctctctcca 149990
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 ttgcagatcttctctctcca 218 |||||||||||||||||||| Sbjct: 152697 ttgcagatcttctctctcca 152716
>emb|BX005394.8| Zebrafish DNA sequence from clone DKEY-3N15 in linkage group 3, complete sequence Length = 190575 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 ttgctccctctccttgaaaa 131 |||||||||||||||||||| Sbjct: 2002 ttgctccctctccttgaaaa 1983
>gb|AC092680.2| Homo sapiens BAC clone RP11-694B12 from 2, complete sequence Length = 200028 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 atgtcttgattgcagatcttctct 213 ||||||||||| |||||||||||| Sbjct: 177481 atgtcttgatttcagatcttctct 177458
>gb|AF270184.1|AF270184 Staphylococcus epidermidis strain SR1 clone step.1052f01 genomic sequence Length = 3889 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 agtagctcttcatcctcttc 237 |||||||||||||||||||| Sbjct: 88 agtagctcttcatcctcttc 69
>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome Length = 2616530 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 agtagctcttcatcctcttc 237 |||||||||||||||||||| Sbjct: 1986721 agtagctcttcatcctcttc 1986702
>emb|BX000475.6| Zebrafish DNA sequence from clone CH211-112P5, complete sequence Length = 156271 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 tcaccattgtcaccaataaa 60 |||||||||||||||||||| Sbjct: 139112 tcaccattgtcaccaataaa 139093
>gb|AC155330.3| Mus musculus 6 BAC RP24-146L23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 215602 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 229 atcctcttctatggtggtgtggta 252 |||||||||| ||||||||||||| Sbjct: 168858 atcctcttctctggtggtgtggta 168835
>dbj|AP000974.5| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-700A24, complete sequence Length = 94359 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tgctcccaaactttatttct 354 |||||||||||||||||||| Sbjct: 91132 tgctcccaaactttatttct 91113
>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome Length = 2499279 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 agtagctcttcatcctcttc 237 |||||||||||||||||||| Sbjct: 1991784 agtagctcttcatcctcttc 1991765
>gb|U35619.1|NTU35619 Nicotiana tabacum ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase (rbcmtT) gene, exons 1-6, complete cds Length = 6095 Score = 40.1 bits (20), Expect = 7.1 Identities = 41/48 (85%) Strand = Plus / Minus Query: 231 cctcttctatggtggtgtggtaggcagcaagggcagatttgcaggcat 278 ||||||| || |||||||| ||| ||| ||| ||||||||||| |||| Sbjct: 4581 cctcttcaattgtggtgtgatagccagaaagtgcagatttgcatgcat 4534
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 ttgcagatcttctctctcca 218 |||||||||||||||||||| Sbjct: 152697 ttgcagatcttctctctcca 152716
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 ttgcagatcttctctctcca 218 |||||||||||||||||||| Sbjct: 149971 ttgcagatcttctctctcca 149990
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 ttgcagatcttctctctcca 218 |||||||||||||||||||| Sbjct: 152296 ttgcagatcttctctctcca 152277
>emb|Z97338.2|ATFCA3 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 3 Length = 200252 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 tccttgaaaatatcattgat 141 |||||||||||||||||||| Sbjct: 139370 tccttgaaaatatcattgat 139389
>emb|AL161541.2|ATCHRIV41 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 41 Length = 197419 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 tccttgaaaatatcattgat 141 |||||||||||||||||||| Sbjct: 92847 tccttgaaaatatcattgat 92866
>emb|BX000496.1|CNS08CDM Oryza sativa chromosome 12, . BAC OSJNBa0096E03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161808 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 ttgcagatcttctctctcca 218 |||||||||||||||||||| Sbjct: 101580 ttgcagatcttctctctcca 101599
>emb|BX571696.7| Zebrafish DNA sequence from clone CH211-140B10 in linkage group 24, complete sequence Length = 171175 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 atgtcaccattgtcaccaataaaa 61 |||||| ||||||||||||||||| Sbjct: 149253 atgtcatcattgtcaccaataaaa 149230
>emb|AL607073.15| Mouse DNA sequence from clone RP23-321K1 on chromosome 4, complete sequence Length = 95219 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 ctttcttttcacccaccctc 172 |||||||||||||||||||| Sbjct: 63129 ctttcttttcacccaccctc 63110 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,247,441 Number of Sequences: 3902068 Number of extensions: 5247441 Number of successful extensions: 97763 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97303 Number of HSP's gapped (non-prelim): 460 length of query: 524 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 501 effective length of database: 17,143,297,704 effective search space: 8588792149704 effective search space used: 8588792149704 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
