>GSA_CORGL (Q8NT73) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)|
           (GSA) (Glutamate-1-semialdehyde aminotransferase)
           (GSA-AT)
          Length = 437

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 399 SSNFPTVLFVKSIGRLFSDRKSAPIFRLEPIY 304
           +SN  ++ F +  G  FSD K+A IFR  P +
Sbjct: 357 ASNMLSIRFAEGEGHNFSDMKAADIFRFAPFF 388

>PRIM_NEIMB (P57029) DNA primase (EC 2.7.7.-)|
          Length = 590

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -1

Query: 220 AIPKISDNVMLSYKFAPAQHEPDPGVSSTRKFQ 122
           A+P++ D+  L + F P +H+PD  + +  K Q
Sbjct: 321 ALPQLKDDKSLHFLFLPEEHDPDSYIRAYGKAQ 353

>PRIM_NEIMA (P57028) DNA primase (EC 2.7.7.-)|
          Length = 590

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -1

Query: 220 AIPKISDNVMLSYKFAPAQHEPDPGVSSTRKFQ 122
           A+P++ D+  L + F P +H+PD  + +  K Q
Sbjct: 321 ALPQLKDDKSLHFLFLPEEHDPDSYIRAYGKAQ 353


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,842,258
Number of Sequences: 219361
Number of extensions: 1079736
Number of successful extensions: 2121
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2121
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)