Clone Name | rbah63f17 |
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Clone Library Name | barley_pub |
>NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-)| (Fragments) Length = 368 Score = 248 bits (634), Expect = 3e-66 Identities = 115/115 (100%), Positives = 115/115 (100%) Frame = -3 Query: 430 GHVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDH 251 GHVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDH Sbjct: 254 GHVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDH 313 Query: 250 DYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS 86 DYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS Sbjct: 314 DYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS 368
>PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6-optimum acid| phosphatase) (APase6) Length = 614 Score = 46.2 bits (108), Expect = 3e-05 Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 10/103 (9%) Frame = -3 Query: 430 GHVHNYERTCPLYQSQCVNA-----DKTHYSGTMNGTIFVVAGGGG-----SHLSSYTTA 281 GH+H YER PL + ++ + T+Y+ ++ G G S S Sbjct: 498 GHIHWYERLYPLGANGTIDTAAIVNNNTYYAHNGKSITHIINGMAGNIESHSEFSDGEGL 557 Query: 280 IPKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTI 152 ++ YGF+KLT FN ++L +E ++ DG V DS T+ Sbjct: 558 TNITALLDKVHYGFSKLTIFNETALKWELIRGDDGTVGDSLTL 600
>PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase precursor (EC| 3.1.3.2) (PAP) Length = 469 Score = 33.5 bits (75), Expect = 0.22 Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 9/94 (9%) Frame = -3 Query: 430 GHVHNYERTCPLYQSQCVNADKTHYSGTM------NGTIFVVAGGGGSHLSSYTTAI--- 278 GHVH YER+ + N +G + I++ G GG+ T + Sbjct: 355 GHVHAYERS-----ERVSNIAYNIVNGLCEPISDESAPIYITIGDGGNSEGLLTDMMQPQ 409 Query: 277 PKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDG 176 PK+S FR+ +G L N + F + ++ DG Sbjct: 410 PKYSAFREASFGHGLLEIKNRTHAYFSWNRNQDG 443
>PPAF_SOYBN (Q09131) Purple acid phosphatase precursor (EC 3.1.3.2)| (Manganese(II) purple acid phosphatase) Length = 464 Score = 30.8 bits (68), Expect = 1.5 Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 9/94 (9%) Frame = -3 Query: 430 GHVHNYERTCPLYQSQCVNADKTHYSGTM------NGTIFVVAGGGGSH---LSSYTTAI 278 GHVH YER+ + N +G + +++ G GG+ ++ T Sbjct: 349 GHVHAYERS-----ERVSNVAYNIVNGLCAPVNDKSAPVYITIGDGGTLEGLATNMTEPQ 403 Query: 277 PKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDG 176 PK+S FR+ +G N + + + ++ DG Sbjct: 404 PKYSAFREASFGHAIFDITNRTHAHYSWHRNQDG 437
>RP1_MOUSE (P56716) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein| homolog) Length = 2095 Score = 30.4 bits (67), Expect = 1.9 Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 2/133 (1%) Frame = -3 Query: 415 YERTCPLYQ--SQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDHDYG 242 + ++ PL Q S VN ++ + G T G + T WS + + G Sbjct: 914 HRKSGPLCQNRSDVVNYNRNGFLGNNLHTTSSKGNGFLMESNKSKTKNDNWSGNTNQETG 973 Query: 241 FTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS*LISSGRH 62 + + N L + +S +G +YDS+ L +HD+C + S+ H Sbjct: 974 KSLVAKDNGEELNKHHCESQNGSLYDSY---------LVSLHDNCTLSQTTINEPSTKSH 1024 Query: 61 VNVMEGHPSNKIV 23 +++ + P K+V Sbjct: 1025 LSIEKSRPEVKLV 1037
>Y2577_MYCTU (Q50644) Hypothetical protein Rv2577/MT2654| Length = 529 Score = 29.6 bits (65), Expect = 3.2 Identities = 25/102 (24%), Positives = 37/102 (36%), Gaps = 38/102 (37%) Frame = -3 Query: 430 GHVHNYERTCPLYQSQCVNA-------DKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPK 272 GH H+YER+ PL + + ++ + GT+ +V GGGG+ + P+ Sbjct: 384 GHEHHYERSHPLRGALGTDTRTPIPVDTRSDLIDSTRGTVHLVIGGGGTSKPTNALLFPQ 443 Query: 271 -----------------------------WSIFRDHD--YGF 239 WS FRD D YGF Sbjct: 444 PRCQVITGVGDFDPAIRRKPSIFVLEDAPWSAFRDRDNPYGF 485
>DSCAM_HUMAN (O60469) Down syndrome cell adhesion molecule precursor (CHD2)| Length = 2012 Score = 28.9 bits (63), Expect = 5.5 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = -3 Query: 235 KLTAFNHSSLLFEYMKSSDGKVYDSF 158 ++T NH +L+ ++M SDG Y F Sbjct: 361 RITGINHENLIMDHMVKSDGGAYQCF 386
>GUND_CLOTM (P04954) Endoglucanase D precursor (EC 3.2.1.4) (EGD)| (Endo-1,4-beta-glucanase) (Cellulase D) Length = 649 Score = 28.1 bits (61), Expect = 9.4 Identities = 17/62 (27%), Positives = 20/62 (32%), Gaps = 10/62 (16%) Frame = -3 Query: 400 PLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTT----------AIPKWSIFRDH 251 P Y +C+NA K Y N V A G Y T A W D Sbjct: 318 PQYAEKCINAAKVSYEFLKNNPANVFANQSGFSTGEYATVSDADDRLWAAAEMWETLGDE 377 Query: 250 DY 245 +Y Sbjct: 378 EY 379
>GBLP_DROME (O18640) Guanine nucleotide-binding protein beta subunit-like| protein (Receptor of activated protein kinase C homolog) Length = 318 Score = 28.1 bits (61), Expect = 9.4 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Frame = -3 Query: 271 WSIFRDHD--YGFTKLTAFNHSSLLFEYMKSSDG 176 W + RD D YG+ + + HS + + + SSDG Sbjct: 43 WKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDG 76 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,454,716 Number of Sequences: 219361 Number of extensions: 844741 Number of successful extensions: 2406 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2368 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2401 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)