ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63f14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CHEB2_RALEJ (Q46PH7) Chemotaxis response regulator protein-gluta... 31 2.1
2ALK_MOUSE (P97793) ALK tyrosine kinase receptor precursor (EC 2.... 29 7.8

>CHEB2_RALEJ (Q46PH7) Chemotaxis response regulator protein-glutamate|
           methylesterase 2 (EC 3.1.1.61)
          Length = 356

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +2

Query: 401 RLEAASVTRVLQAPQACKGIPAAP 472
           ++ AAS  RV QAPQA  G PA P
Sbjct: 128 KIRAASRARVRQAPQAASGTPATP 151



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>ALK_MOUSE (P97793) ALK tyrosine kinase receptor precursor (EC 2.7.10.1)|
           (Anaplastic lymphoma kinase) (CD246 antigen)
          Length = 1621

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +1

Query: 265 KDGQQQGKTAWHALQNQGLSVCWCLVLIWILNPT 366
           K G++Q +T WH   ++GLS+ W   ++ +L+ T
Sbjct: 576 KTGKEQSRTVWHVATDEGLSL-WQHTVLSLLDVT 608


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,414,285
Number of Sequences: 219361
Number of extensions: 1448231
Number of successful extensions: 3463
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3462
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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