ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63f10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK105686.1| Oryza sativa (japonica cultivar-group) cDNA clon... 341 1e-90
2gb|AY104909.1| Zea mays PCO111730 mRNA sequence 301 1e-78
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 176 5e-41
4dbj|AP005545.3| Oryza sativa (japonica cultivar-group) genomic D... 176 5e-41
5gb|AC141115.22| Medicago truncatula clone mth2-16b23, complete s... 60 8e-06
6emb|AJ630655.1| Cicer arietinum partial mRNA for C2 domain-conta... 50 0.008
7gb|AE002139.1| Ureaplasma parvum serovar 3 str. ATCC 700970 sect... 44 0.48
8gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome 42 1.9
9gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome 42 1.9
10gb|AC121884.3| Mus musculus BAC clone RP24-138L20 from chromosom... 42 1.9
11gb|AC124557.4| Mus musculus BAC clone RP23-247H15 from chromosom... 42 1.9
12gb|AY197974.1| Biomphalaria pfeifferi isolate 1133 clone 5 inter... 42 1.9
13gb|AY197973.1| Biomphalaria pfeifferi isolate 1133 clone 3 inter... 42 1.9
14gb|AY197917.1| Biomphalaria pfeifferi isolate 2005 clone 6 inter... 42 1.9
15emb|AL669937.11| Mouse DNA sequence from clone DN-358O3 on chrom... 42 1.9
16gb|AC012188.2|F14L17 Sequence of BAC F14L17 from Arabidopsis tha... 42 1.9
17emb|AL645930.15| Mouse DNA sequence from clone RP23-434L7 on chr... 42 1.9
18gb|AC007890.6| Drosophila melanogaster clone BACR02G21, complete... 40 7.6
19gb|AC009736.10| Drosophila melanogaster clone BACR10A04, complet... 40 7.6
20gb|AC152421.8| Medicago truncatula clone mth2-7h20, complete seq... 40 7.6
21emb|AL157812.5| Human DNA sequence from clone RP11-14B2 on chrom... 40 7.6
22emb|CR380949.1| Candida glabrata strain CBS138 chromosome C comp... 40 7.6
23emb|AL596111.7| Mouse DNA sequence from clone RP23-188E9 on chro... 40 7.6
24gb|AC023690.3| Drosophila melanogaster X BAC RP98-6M20 (Roswell ... 40 7.6
25gb|AC022709.7| Homo sapiens chromosome 8, clone RP11-88H1, compl... 40 7.6
26gb|AC068349.6| Homo sapiens chromosome 8, clone RP11-696J24, com... 40 7.6
27emb|BX119908.8| Zebrafish DNA sequence from clone CH211-225A3 in... 40 7.6
28emb|AL935034.18| Zebrafish DNA sequence from clone CH211-160A3 i... 40 7.6
29emb|AL935299.11| Zebrafish DNA sequence from clone DKEY-38M5, co... 40 7.6
30emb|AL365294.4|CNS05TF4 Human chromosome 14 DNA sequence BAC R-7... 40 7.6
31gb|AE003722.4| Drosophila melanogaster chromosome 3R, section 60... 40 7.6
32gb|AE003488.3| Drosophila melanogaster chromosome X, section 40 ... 40 7.6
33gb|AC006256.1|AC006256 Homo sapiens chromosome 18, clone hRPK.12... 40 7.6
34emb|BX005355.10| Zebrafish DNA sequence from clone CH211-222M2, ... 40 7.6
35emb|AL356016.2|CNS05TD6 Human chromosome 14 DNA sequence BAC R-9... 40 7.6 
>dbj|AK105686.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-B10, full
            insert sequence
          Length = 3335

 Score =  341 bits (172), Expect = 1e-90
 Identities = 259/288 (89%)
 Strand = Plus / Minus

                                                                        
Query: 271  tgtcatttgttcgaccattggaattcgatttccaggttcctattcggaccgcttttgctc 330
            ||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||| |||
Sbjct: 3116 tgtcatttgtttgaccattggaattcaatttccaggttcctattaggaccgcttttactc 3057

                                                                        
Query: 331  tccggcagcagggtgtattctccagcgactgatcccagcatgacaacccggtcaatctgg 390
            || || |||| ||||||||| ||||| || || ||||||||||||||||| || ||||||
Sbjct: 3056 tctggtagcaaggtgtattcgccagcaacggagcccagcatgacaacccgatcgatctgg 2997

                                                                        
Query: 391  atcgtcaccttaccaaatgatttctttccgaatttgctgttgtttttgcaagagatatga 450
            || ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 2996 attgtcaccttaccaaatgatttctttccgaatttgctattgtttttgcaggagatatga 2937

                                                                        
Query: 451  agtttctggcccttaggagggctgtcaaaagcccatgcgaaggcctcatcccattcaggt 510
            || ||||| ||||| |||||||||||||| ||||| || ||||| |||||||||||||||
Sbjct: 2936 agcttctgcccctttggagggctgtcaaacgcccacgcaaaggcttcatcccattcaggt 2877

                                                            
Query: 511  gactcaccagtcgagacaatctttgtcagccttgctggattatttcca 558
            |   ||||||| ||||||||||||||||||||||  ||||||||||||
Sbjct: 2876 gttgcaccagttgagacaatctttgtcagccttggcggattatttcca 2829



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 50/55 (90%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                   
Query: 144  tttctctgccggctatttacactgatgcacaaacagggtaac-attatagcagag 197
            ||||||||| ||||||||||||||||||||||| | ||||||  |||||||||||
Sbjct: 3245 tttctctgcaggctatttacactgatgcacaaatatggtaacgtttatagcagag 3191
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>gb|AY104909.1| Zea mays PCO111730 mRNA sequence
          Length = 1169

 Score =  301 bits (152), Expect = 1e-78
 Identities = 251/284 (88%)
 Strand = Plus / Minus

                                                                       
Query: 275 atttgttcgaccattggaattcgatttccaggttcctattcggaccgcttttgctctccg 334
           ||||||| ||||| ||||| || ||||||||||| ||||| || |||||||||||||| |
Sbjct: 937 atttgtttgaccactggaactcaatttccaggtttctattggggccgcttttgctctcgg 878

                                                                       
Query: 335 gcagcagggtgtattctccagcgactgatcccagcatgacaacccggtcaatctggatcg 394
           | ||||||||||| || || |||||||| |||| ||||||||||| ||| |||||||| |
Sbjct: 877 gtagcagggtgtactcacctgcgactgaccccaacatgacaaccctgtcgatctggattg 818

                                                                       
Query: 395 tcaccttaccaaatgatttctttccgaatttgctgttgtttttgcaagagatatgaagtt 454
           |||| ||||| |||| ||||||||| |||||||||||||||||||| ||||||||||| |
Sbjct: 817 tcactttaccgaatgctttctttccaaatttgctgttgtttttgcaggagatatgaagct 758

                                                                       
Query: 455 tctggcccttaggagggctgtcaaaagcccatgcgaaggcctcatcccattcaggtgact 514
           |||||||||| ||||| |||||||| |||||||| ||||| |||||||||||||||| | 
Sbjct: 757 tctggcccttgggaggactgtcaaatgcccatgcaaaggcttcatcccattcaggtgtcg 698

                                                       
Query: 515 caccagtcgagacaatctttgtcagccttgctggattatttcca 558
           | ||||||||||||||||||||||||| || |||||||||||||
Sbjct: 697 cgccagtcgagacaatctttgtcagccgtggtggattatttcca 654



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                       
Query: 143  ctttctctgccggctatttacactgatgcacaaacagggtaac 185
            ||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 1066 ctttctctgcccgctatttacaatgatgcacaaacagggtaac 1024
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  176 bits (89), Expect = 5e-41
 Identities = 131/145 (90%)
 Strand = Plus / Plus

                                                                           
Query: 271     tgtcatttgttcgaccattggaattcgatttccaggttcctattcggaccgcttttgctc 330
               ||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||| |||
Sbjct: 6412553 tgtcatttgtttgaccattggaattcaatttccaggttcctattaggaccgcttttactc 6412612

                                                                           
Query: 331     tccggcagcagggtgtattctccagcgactgatcccagcatgacaacccggtcaatctgg 390
               || || |||| ||||||||| ||||| || || ||||||||||||||||| || ||||||
Sbjct: 6412613 tctggtagcaaggtgtattcgccagcaacggagcccagcatgacaacccgatcgatctgg 6412672

                                        
Query: 391     atcgtcaccttaccaaatgatttct 415
               || ||||||||||||||||||||||
Sbjct: 6412673 attgtcaccttaccaaatgatttct 6412697



 Score =  133 bits (67), Expect = 7e-28
 Identities = 106/119 (89%)
 Strand = Plus / Plus

                                                                           
Query: 414     ctttccgaatttgctgttgtttttgcaagagatatgaagtttctggcccttaggagggct 473
               ||||||||||||||| ||||||||||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 6412855 ctttccgaatttgctattgtttttgcaggagatatgaagcttctgcccctttggagggct 6412914

                                                                          
Query: 474     gtcaaaagcccatgcgaaggcctcatcccattcaggtgactcaccagtcgagacaatct 532
               |||||| ||||| || ||||| ||||||||||||||||   ||||||| ||||||||||
Sbjct: 6412915 gtcaaacgcccacgcaaaggcttcatcccattcaggtgttgcaccagttgagacaatct 6412973



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 50/55 (90%), Gaps = 1/55 (1%)
 Strand = Plus / Plus

                                                                      
Query: 144     tttctctgccggctatttacactgatgcacaaacagggtaac-attatagcagag 197
               ||||||||| ||||||||||||||||||||||| | ||||||  |||||||||||
Sbjct: 6412424 tttctctgcaggctatttacactgatgcacaaatatggtaacgtttatagcagag 6412478



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 531     ctttgtcagccttgctggattatttcca 558
               ||||||||||||||  ||||||||||||
Sbjct: 6414046 ctttgtcagccttggcggattatttcca 6414073
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>dbj|AP005545.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0638H11
          Length = 162746

 Score =  176 bits (89), Expect = 5e-41
 Identities = 131/145 (90%)
 Strand = Plus / Plus

                                                                         
Query: 271   tgtcatttgttcgaccattggaattcgatttccaggttcctattcggaccgcttttgctc 330
             ||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||| |||
Sbjct: 79497 tgtcatttgtttgaccattggaattcaatttccaggttcctattaggaccgcttttactc 79556

                                                                         
Query: 331   tccggcagcagggtgtattctccagcgactgatcccagcatgacaacccggtcaatctgg 390
             || || |||| ||||||||| ||||| || || ||||||||||||||||| || ||||||
Sbjct: 79557 tctggtagcaaggtgtattcgccagcaacggagcccagcatgacaacccgatcgatctgg 79616

                                      
Query: 391   atcgtcaccttaccaaatgatttct 415
             || ||||||||||||||||||||||
Sbjct: 79617 attgtcaccttaccaaatgatttct 79641



 Score =  133 bits (67), Expect = 7e-28
 Identities = 106/119 (89%)
 Strand = Plus / Plus

                                                                         
Query: 414   ctttccgaatttgctgttgtttttgcaagagatatgaagtttctggcccttaggagggct 473
             ||||||||||||||| ||||||||||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 79799 ctttccgaatttgctattgtttttgcaggagatatgaagcttctgcccctttggagggct 79858

                                                                        
Query: 474   gtcaaaagcccatgcgaaggcctcatcccattcaggtgactcaccagtcgagacaatct 532
             |||||| ||||| || ||||| ||||||||||||||||   ||||||| ||||||||||
Sbjct: 79859 gtcaaacgcccacgcaaaggcttcatcccattcaggtgttgcaccagttgagacaatct 79917



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 50/55 (90%), Gaps = 1/55 (1%)
 Strand = Plus / Plus

                                                                    
Query: 144   tttctctgccggctatttacactgatgcacaaacagggtaac-attatagcagag 197
             ||||||||| ||||||||||||||||||||||| | ||||||  |||||||||||
Sbjct: 79368 tttctctgcaggctatttacactgatgcacaaatatggtaacgtttatagcagag 79422



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 531   ctttgtcagccttgctggattatttcca 558
             ||||||||||||||  ||||||||||||
Sbjct: 80990 ctttgtcagccttggcggattatttcca 81017
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>gb|AC141115.22| Medicago truncatula clone mth2-16b23, complete sequence
          Length = 126187

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                         
Query: 414   ctttccgaatttgctgttgtttttgcaagagatatgaagtttctggcccttaggagggct 473
             |||||| | |||||| |||||||||||||| |||||||| |||||||| || ||||| ||
Sbjct: 96846 ctttcccactttgctcttgtttttgcaagaaatatgaagcttctggccttttggaggact 96787

                   
Query: 474   gtcaaa 479
              |||||
Sbjct: 96786 ctcaaa 96781
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>emb|AJ630655.1| Cicer arietinum partial mRNA for C2 domain-containing protein (ORF
           313-1)
          Length = 1065

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 79/97 (81%)
 Strand = Plus / Minus

                                                                       
Query: 413 tctttccgaatttgctgttgtttttgcaagagatatgaagtttctggcccttaggagggc 472
           ||||||| | |||||| ||||||||||| || |||||||| || ||||| || ||||| |
Sbjct: 582 tctttcccactttgcttttgtttttgcacgaaatatgaagcttttggccttttggaggac 523

                                                
Query: 473 tgtcaaaagcccatgcgaaggcctcatcccattcagg 509
           | ||||| | |||||  |||  ||||||||| |||||
Sbjct: 522 tctcaaaggaccatgaaaagctctcatcccactcagg 486
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>gb|AE002139.1| Ureaplasma parvum serovar 3 str. ATCC 700970 section 40 of 59 of the
            complete genome
          Length = 11250

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 3    ataaagattatacaaacgaaaa 24
            ||||||||||||||||||||||
Sbjct: 8768 ataaagattatacaaacgaaaa 8789
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>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 9       attatacaaacgaaaaaatcc 29
               |||||||||||||||||||||
Sbjct: 1063596 attatacaaacgaaaaaatcc 1063616
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>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 9       attatacaaacgaaaaaatcc 29
               |||||||||||||||||||||
Sbjct: 1064449 attatacaaacgaaaaaatcc 1064469
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>gb|AC121884.3| Mus musculus BAC clone RP24-138L20 from chromosome 15, complete sequence
          Length = 204711

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 395    tcaccttaccaaatgatttctttcc 419
              ||||||| |||||||||||||||||
Sbjct: 128751 tcaccttcccaaatgatttctttcc 128727
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>gb|AC124557.4| Mus musculus BAC clone RP23-247H15 from chromosome 19, complete sequence
          Length = 178544

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 224    actttatatattttaacttac 244
              |||||||||||||||||||||
Sbjct: 118011 actttatatattttaacttac 118031
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>gb|AY197974.1| Biomphalaria pfeifferi isolate 1133 clone 5 internal transcribed
          spacer 1, complete sequence
          Length = 567

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 63 acaatcagtacaaaaaacaac 83
          |||||||||||||||||||||
Sbjct: 43 acaatcagtacaaaaaacaac 63
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>gb|AY197973.1| Biomphalaria pfeifferi isolate 1133 clone 3 internal transcribed
          spacer 1, complete sequence
          Length = 567

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 63 acaatcagtacaaaaaacaac 83
          |||||||||||||||||||||
Sbjct: 43 acaatcagtacaaaaaacaac 63
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>gb|AY197917.1| Biomphalaria pfeifferi isolate 2005 clone 6 internal transcribed
          spacer 1, complete sequence
          Length = 565

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 63 acaatcagtacaaaaaacaac 83
          |||||||||||||||||||||
Sbjct: 43 acaatcagtacaaaaaacaac 63
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>emb|AL669937.11| Mouse DNA sequence from clone DN-358O3 on chromosome 3 Contains the
              Trim45 gene for tripartite motif-containing 45, the Ttf2
              gene for transcription termination factor RNA polymerase
              II, the ortholog of human immunoglobulin superfamily member
              2 IGSF2 (Gm1016 genemodel 1016 (NCBI)) and the 3' end of
              the Ptgfrn gene for prostaglandin F2 receptor negative
              regulator, complete sequence
          Length = 163674

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 399    cttaccaaatgatttctttcc 419
              |||||||||||||||||||||
Sbjct: 148989 cttaccaaatgatttctttcc 148969
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>gb|AC012188.2|F14L17 Sequence of BAC F14L17 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 111686

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 6     aagattatacaaacgaaaaaa 26
             |||||||||||||||||||||
Sbjct: 89527 aagattatacaaacgaaaaaa 89547
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>emb|AL645930.15| Mouse DNA sequence from clone RP23-434L7 on chromosome 3, complete
            sequence
          Length = 227993

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 399  cttaccaaatgatttctttcc 419
            |||||||||||||||||||||
Sbjct: 5505 cttaccaaatgatttctttcc 5485
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>gb|AC007890.6| Drosophila melanogaster clone BACR02G21, complete sequence
          Length = 171563

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      aagattatacaaacgaaaaa 25
              ||||||||||||||||||||
Sbjct: 146608 aagattatacaaacgaaaaa 146589
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>gb|AC009736.10| Drosophila melanogaster clone BACR10A04, complete sequence
          Length = 165489

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     aagattatacaaacgaaaaa 25
             ||||||||||||||||||||
Sbjct: 27868 aagattatacaaacgaaaaa 27849
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>gb|AC152421.8| Medicago truncatula clone mth2-7h20, complete sequence
          Length = 127540

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   caccttaccaaatgatttct 415
             ||||||||||||||||||||
Sbjct: 93861 caccttaccaaatgatttct 93880
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>emb|AL157812.5| Human DNA sequence from clone RP11-14B2 on chromosome 13q21.1-21.3
             Contains GSSs and STSs, complete sequence
          Length = 166971

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 526   acaatctttgtcagccttgc 545
             ||||||||||||||||||||
Sbjct: 23038 acaatctttgtcagccttgc 23057
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>emb|CR380949.1| Candida glabrata strain CBS138 chromosome C complete sequence
          Length = 558804

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 59     cattacaatcagtacaaaaaacaa 82
              ||||||||||||||||||| ||||
Sbjct: 220584 cattacaatcagtacaaaatacaa 220607
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>emb|AL596111.7| Mouse DNA sequence from clone RP23-188E9 on chromosome 11, complete
             sequence
          Length = 199961

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 394   gtcaccttaccaaatgattt 413
             ||||||||||||||||||||
Sbjct: 66443 gtcaccttaccaaatgattt 66424
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>gb|AC023690.3| Drosophila melanogaster X BAC RP98-6M20 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 176233

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 422   atttgctgttgtttttgcaa 441
             ||||||||||||||||||||
Sbjct: 77227 atttgctgttgtttttgcaa 77246
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>gb|AC022709.7| Homo sapiens chromosome 8, clone RP11-88H1, complete sequence
          Length = 164290

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 198    gatatggaacaagaaaacca 217
              ||||||||||||||||||||
Sbjct: 139946 gatatggaacaagaaaacca 139927
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>gb|AC068349.6| Homo sapiens chromosome 8, clone RP11-696J24, complete sequence
          Length = 186012

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 198   gatatggaacaagaaaacca 217
             ||||||||||||||||||||
Sbjct: 50140 gatatggaacaagaaaacca 50159
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>emb|BX119908.8| Zebrafish DNA sequence from clone CH211-225A3 in linkage group 11,
              complete sequence
          Length = 121802

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    acattatagcagaggatatg 203
              ||||||||||||||||||||
Sbjct: 100124 acattatagcagaggatatg 100143
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>emb|AL935034.18| Zebrafish DNA sequence from clone CH211-160A3 in linkage group 12,
             complete sequence
          Length = 171213

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   tttacactgatgcacaaaca 178
             ||||||||||||||||||||
Sbjct: 55846 tttacactgatgcacaaaca 55827
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>emb|AL935299.11| Zebrafish DNA sequence from clone DKEY-38M5, complete sequence
          Length = 229574

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     tgtttttatctcacaaaaag 113
              ||||||||||||||||||||
Sbjct: 229183 tgtttttatctcacaaaaag 229164
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>emb|AL365294.4|CNS05TF4 Human chromosome 14 DNA sequence BAC R-746E9 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 188478

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 529    atctttgtcagccttgctgg 548
              ||||||||||||||||||||
Sbjct: 160826 atctttgtcagccttgctgg 160845
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>gb|AE003722.4| Drosophila melanogaster chromosome 3R, section 60 of 118 of the
             complete sequence
          Length = 221164

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     aagattatacaaacgaaaaa 25
             ||||||||||||||||||||
Sbjct: 95106 aagattatacaaacgaaaaa 95087
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>gb|AE003488.3| Drosophila melanogaster chromosome X, section 40 of 74 of the complete
              sequence
          Length = 315134

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 422    atttgctgttgtttttgcaa 441
              ||||||||||||||||||||
Sbjct: 118661 atttgctgttgtttttgcaa 118680
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>gb|AC006256.1|AC006256 Homo sapiens chromosome 18, clone hRPK.12_J_19, complete sequence
          Length = 157803

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 529   atctttgtcagccttgctgg 548
             ||||||||||||||||||||
Sbjct: 60485 atctttgtcagccttgctgg 60466
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>emb|BX005355.10| Zebrafish DNA sequence from clone CH211-222M2, complete sequence
          Length = 227182

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 158    atttacactgatgcacaaac 177
              ||||||||||||||||||||
Sbjct: 155106 atttacactgatgcacaaac 155087
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>emb|AL356016.2|CNS05TD6 Human chromosome 14 DNA sequence BAC R-96H16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 156292

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 529    atctttgtcagccttgctgg 548
              ||||||||||||||||||||
Sbjct: 139240 atctttgtcagccttgctgg 139221


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,196,387
Number of Sequences: 3902068
Number of extensions: 5196387
Number of successful extensions: 98659
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98498
Number of HSP's gapped (non-prelim): 161
length of query: 558
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 535
effective length of database: 17,143,297,704
effective search space: 9171664271640
effective search space used: 9171664271640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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