>NUAM_SOLTU (Q43644) NADH-ubiquinone oxidoreductase 75 kDa subunit,|
           mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
           (Complex I-75KD) (CI-75KD) (76 kDa mitochondrial complex
           I subunit)
          Length = 738

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 37/55 (67%), Positives = 42/55 (76%)
 Frame = -2

Query: 522 VDERETSVISAEVKPPVKQQVSPAPFKAAVENFYMTDAITRASKIMAQCSATLLK 358
           VDER+ +  S  ++P V Q+VS  PF  AVENFYMTDAITRASKIMAQCSA L K
Sbjct: 684 VDERQPATFSTSLRPEVSQKVSATPFTPAVENFYMTDAITRASKIMAQCSALLKK 738

>NUAM_ARATH (Q9FGI6) NADH-ubiquinone oxidoreductase 75 kDa subunit,|
           mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
           (Complex I-75Kd) (CI-75Kd) (75 kDa mitochondrial complex
           I subunit)
          Length = 748

 Score = 72.0 bits (175), Expect = 9e-13
 Identities = 34/55 (61%), Positives = 41/55 (74%)
 Frame = -2

Query: 519 DERETSVISAEVKPPVKQQVSPAPFKAAVENFYMTDAITRASKIMAQCSATLLKK 355
           DERE +     +KP  K+ +S  PF+  VENFYMT++ITRASKIMAQCSA LLKK
Sbjct: 691 DEREPAAFGPSLKPECKEAMSTTPFQTVVENFYMTNSITRASKIMAQCSAVLLKK 745

>NUAM_NEUCR (P24918) NADH-ubiquinone oxidoreductase 78 kDa subunit,|
           mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
           (Complex I-78KD) (CI-78KD)
          Length = 744

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 14/53 (26%)
 Frame = -2

Query: 486 VKPPVKQQVSPA--------------PFKAAVENFYMTDAITRASKIMAQCSA 370
           ++PP  QQ+S                P K  +ENFY TDAI+R+S  MA+CSA
Sbjct: 663 IEPPSLQQLSKVQLVEQNQGATATNEPLKKVIENFYFTDAISRSSPTMARCSA 715

>NUAM_RECAM (O21241) NADH-ubiquinone oxidoreductase 75 kDa subunit (EC 1.6.5.3)|
           (EC 1.6.99.3) (Complex I-75KD) (CI-75KD) (NADH
           dehydrogenase subunit 11)
          Length = 691

 Score = 37.4 bits (85), Expect = 0.025
 Identities = 20/51 (39%), Positives = 29/51 (56%)
 Frame = -2

Query: 522 VDERETSVISAEVKPPVKQQVSPAPFKAAVENFYMTDAITRASKIMAQCSA 370
           V+  E + I  E   P K  +    FK    NFY+T+AI R+S+ MA+CS+
Sbjct: 636 VNAIEKNKIVIENSLPFKGLIKNIGFKPLFNNFYLTNAICRSSQTMAKCSS 686

>NUAM_BOVIN (P15690) NADH-ubiquinone oxidoreductase 75 kDa subunit,|
           mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
           (Complex I-75Kd) (CI-75Kd)
          Length = 727

 Score = 35.0 bits (79), Expect = 0.13
 Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
 Frame = -2

Query: 495 SAEVKPPVKQQVSPAPF---KAAVENFYMTDAITRASKIMAQC 376
           ++E+   V QQ+   P    +  +++FYMTD+I+RAS+ MA+C
Sbjct: 668 ASELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRASQTMAKC 710

>NUAM_MOUSE (Q91VD9) NADH-ubiquinone oxidoreductase 75 kDa subunit,|
           mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
           (Complex I-75Kd) (CI-75Kd)
          Length = 727

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
 Frame = -2

Query: 495 SAEVKPPVKQQVSPAPF---KAAVENFYMTDAITRASKIMAQC 376
           ++E+   V Q+V   P    +  +++FYMTD+I+RAS+ MA+C
Sbjct: 668 ASELAKLVNQEVLADPLVPPQLTIKDFYMTDSISRASQTMAKC 710

>NUAM_PONPY (Q5R911) NADH-ubiquinone oxidoreductase 75 kDa subunit,|
           mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
           (Complex I-75Kd) (CI-75Kd)
          Length = 727

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
 Frame = -2

Query: 489 EVKPPVKQQVSPAPF---KAAVENFYMTDAITRASKIMAQC 376
           E+   V QQ+   P    +  +++FYMTD+I+RAS+ MA+C
Sbjct: 670 ELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRASQTMAKC 710

>NUAM_HUMAN (P28331) NADH-ubiquinone oxidoreductase 75 kDa subunit,|
           mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
           (Complex I-75Kd) (CI-75Kd)
          Length = 727

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
 Frame = -2

Query: 489 EVKPPVKQQVSPAPF---KAAVENFYMTDAITRASKIMAQC 376
           E+   V QQ+   P    +  +++FYMTD+I+RAS+ MA+C
Sbjct: 670 ELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRASQTMAKC 710

>NUOG_RICCN (Q92G92) NADH-quinone oxidoreductase chain G (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain G) (NDH-1, chain G)
          Length = 676

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -2

Query: 471 KQQVSPAPFKAAVENFYMTDAITRASKIMAQC 376
           K ++S  P  A   N+YMTD I++ S  MA+C
Sbjct: 633 KDKLSKEPITAEPINYYMTDVISKNSVTMAKC 664

>NUAM_DROME (Q94511) NADH-ubiquinone oxidoreductase 75 kDa subunit,|
           mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
           (Complex I-75Kd) (CI-75Kd)
          Length = 731

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 12/27 (44%), Positives = 21/27 (77%)
 Frame = -2

Query: 435 VENFYMTDAITRASKIMAQCSATLLKK 355
           + +++MTDAI+RAS  MA+C + + K+
Sbjct: 693 LRDYFMTDAISRASPTMAKCISAVNKQ 719

>NET4_HUMAN (Q9HB63) Netrin-4 precursor (Beta-netrin) (Hepar-derived|
           netrin-like protein)
          Length = 628

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 18/60 (30%), Positives = 22/60 (36%)
 Frame = +1

Query: 259 ILPANQATTTGERNGKGQLKSCLPVIT*SRASLLQQGCTALSHYF*SPCDCIGHVEVLHG 438
           +LPAN  T     NG      C P +   R      G      Y   PCDC G  + + G
Sbjct: 404 VLPANSVTFCDPSNGDCP---CKPGVAGRRCDRCMVGYWGFGDYGCRPCDCAGSCDPITG 460

>VPS39_YEAST (Q07468) Vacuolar assembly protein VPS39 (Vacuolar morphogenesis|
           protein VAM6)
          Length = 1049

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -2

Query: 489 EVKPPVKQQVSPAPFKAAVENFYMTDAITRASKIMAQCSATLL 361
           +V P + Q     P    +ENFY  + +   S I AQC  TL+
Sbjct: 50  QVYPDLLQNAKNDPLPPVIENFYFANEL---STIFAQCKETLI 89

>RAGE_BOVIN (Q28173) Advanced glycosylation end product-specific receptor|
           precursor (Receptor for advanced glycosylation end
           products)
          Length = 416

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 167 YAPLLTRYRKMHCFQVXXXX-XXXXGGDSPNLYSQPTKQQQLVSEMEKG 310
           + P L R R +H   +         GG+ PN+ + P K+ QLV E E G
Sbjct: 209 FTPGLPRRRALHTAPIQLRVWSEHRGGEGPNVDAVPLKEVQLVVEPEGG 257

>NUOG_RICPR (Q9ZCF6) NADH-quinone oxidoreductase chain G (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain G) (NDH-1, chain G)
          Length = 675

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -2

Query: 465 QVSPAPFKAAVENFYMTDAITRASKIMAQC 376
           ++S  P  A   N+YMTD I++ S  MA+C
Sbjct: 630 KLSKDPIAARPINYYMTDVISKNSVTMAKC 659


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,559,821
Number of Sequences: 219361
Number of extensions: 1456485
Number of successful extensions: 3122
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3122
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3985467738
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)